mRNA_4794 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|159905
Unique NamemRNA_4794
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|159905 vs. uniprot
Match: A0A835ZCN0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCN0_9STRA)

HSP 1 Score: 651 bits (1679), Expect = 2.690e-232
Identity = 440/440 (100.00%), Postives = 440/440 (100.00%), Query Frame = 1 
Query:    1 LPPSLRVLDLNDREFFNHALGRLPRTLRKLRLGAAFNHTLLPQAALLXXXXXXXXXXXXXXXXXGPLPEGLVELRAHSFSRDCCFSRALGPLPAALRILDLARCTXXXXXXXXXXXXXXELRLGGAFDQPLPQLPASLEVQALGTACGAALPATLPRXXXXLRIGHRFNAXLALPPTLEFLIIGNSYTHRLDLAALPLKTLHVGRSYAHALPPLPGTPLPPSLQVLGLHQCHRFNHSLGRLPCTLRKLRLGAAFSHPLLPQHASLLAVQGQQALDAESAAEPVQPAPDALVRLPETLTVLGVGEAFDHPLGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVVLPRALRELHMGHRFNAPLALPPRLEFLLIGNSYTHRLDLAALSLKRLYVGRSYAHALPPLPGTLVMR 1320
            LPPSLRVLDLNDREFFNHALGRLPRTLRKLRLGAAFNHTLLPQAALLXXXXXXXXXXXXXXXXXGPLPEGLVELRAHSFSRDCCFSRALGPLPAALRILDLARCTXXXXXXXXXXXXXXELRLGGAFDQPLPQLPASLEVQALGTACGAALPATLPRXXXXLRIGHRFNAXLALPPTLEFLIIGNSYTHRLDLAALPLKTLHVGRSYAHALPPLPGTPLPPSLQVLGLHQCHRFNHSLGRLPCTLRKLRLGAAFSHPLLPQHASLLAVQGQQALDAESAAEPVQPAPDALVRLPETLTVLGVGEAFDHPLGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVVLPRALRELHMGHRFNAPLALPPRLEFLLIGNSYTHRLDLAALSLKRLYVGRSYAHALPPLPGTLVMR
Sbjct:    1 LPPSLRVLDLNDREFFNHALGRLPRTLRKLRLGAAFNHTLLPQAALLXXXXXXXXXXXXXXXXXGPLPEGLVELRAHSFSRDCCFSRALGPLPAALRILDLARCTXXXXXXXXXXXXXXELRLGGAFDQPLPQLPASLEVQALGTACGAALPATLPRXXXXLRIGHRFNAXLALPPTLEFLIIGNSYTHRLDLAALPLKTLHVGRSYAHALPPLPGTPLPPSLQVLGLHQCHRFNHSLGRLPCTLRKLRLGAAFSHPLLPQHASLLAVQGQQALDAESAAEPVQPAPDALVRLPETLTVLGVGEAFDHPLGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVVLPRALRELHMGHRFNAPLALPPRLEFLLIGNSYTHRLDLAALSLKRLYVGRSYAHALPPLPGTLVMR 440
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BLAST of jgi.p|Trimin1|159905 vs. uniprot
Match: A0A835ZH80_9STRA (Sulfhydryl oxidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH80_9STRA)

HSP 1 Score: 191 bits (485), Expect = 5.590e-50
Identity = 150/284 (52.82%), Postives = 167/284 (58.80%), Query Frame = 1 
Query:  505 NAXLALPPTLEFLIIGNSYTHRLD--LAALPLKTLHVGRSYAHALPPLPGTPLPPSLQVLGLHQCHRFNHSLGRLPCTLRKLRLGAAFSHPLLP-QHASLLAVQGQQA----LDAESAAEPVQPAPDALVRLPETLTVLGVGEAFDHPLG-----LXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVVLPRALRELHMGHRFNAPLALPPRLEFLLIGNSYTHRLDLAALSLKRLYVGRSYAHALPPLPGTLVMR 1320
            +A   LP  L  L +G   +H L   LA L    +H G  +       P   LPPSLQVL LHQC++            R+LRLGA F+ PLLP QHASL AVQGQQA    L A +AAEP+QP P+ LVRLPETLT+L VG AFDHPLG     L                  XXXXXXXXXXXXXXXXXXXX                    P  LPR LRELH+GHRFNAPLALPP LE L IG+ YTHRLDLAAL LK+L V   YAHALP LPGT V+R
Sbjct:  519 SALSPLPERLAHLSLGRDVSHALGALLAGLRELRIHDGSPWGICKFNQPLGTLPPSLQVLDLHQCYQXXXXXXXXXXXXRQLRLGAVFNQPLLPLQHASLPAVQGQQAAAPALGAGAAAEPLQPVPNVLVRLPETLTMLHVGNAFDHPLGPLPEGLTELRVGSISRDGRFSHAIXXXXXXXXXXXXXXXXXXXXSRIPARLEVLVLGDAFDAALPAALPRTLRELHLGHRFNAPLALPPALEVLTIGDGYTHRLDLAALPLKKLCVSHGYAHALPRLPGTRVIR 802
[Close]
BLAST of jgi.p|Trimin1|159905 vs. uniprot
Match: A0A835ZNW3_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZNW3_9STRA)

HSP 1 Score: 183 bits (464), Expect = 9.410e-49
Identity = 145/275 (52.73%), Postives = 160/275 (58.18%), Query Frame = 1 
Query:    4 PPSLRVLDLNDREFFNHALGR-LPRTLRKLRLGAAFNH--TLLPQAALLXXXXXXXXXXXXXXXXXGPLPEGLVELRAHSFSRDCCFSRALGPLPAALRILDLARCTXXXXXXXXXXXXXXELRLGGAFDQPLPQLPASLEVQALGTACGAALPATLPRXXXXLRIGHRFNAXLALPPTLEFLIIGNSYTHRLDLAALPLKTLHVGRSYAHALPPLPGTPL---------------PPSLQVLGLHQCHRFNHSLGRLPCTLRKLRLGAAFSHPL 774
            P  L VL L D   F+ AL   LPRTLR+L LG  FN   TL P   LL                   LP   + LR    S DCCFS ALGPLPAALRILDL+ C  XXXXXXXXXXXXXELRL   FDQPLPQL A LEV ALG A  AALPA LPR    L  G+ FNA L LPP L+ L IG SYTHRLDLAAL LK L VGRSYA+ALPPL    L               P SL+ L       F+ +LG+LP ++  L LGA+F+  L
Sbjct:  168 PARLEVLALGDS--FDAALPAVLPRTLRELYLGNRFNAPLTLPPGLNLLAIGDRYPHRLDL-----AALPLKKLYLRVGRCSCDCCFSHALGPLPAALRILDLSTCAMXXXXXXXXXXXXXELRLDSDFDQPLPQLNACLEVLALGDAFDAALPAVLPRALRELHWGNGFNAPLTLPPRLKVLTIGISYTHRLDLAALSLKELRVGRSYANALPPLEVLTLSSGGYMRLNLTLGALPHSLETLDTTCFANFSSALGQLPESITCLNLGASFNQAL 435
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BLAST of jgi.p|Trimin1|159905 vs. uniprot
Match: A0A835ZDX0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDX0_9STRA)

HSP 1 Score: 183 bits (465), Expect = 8.930e-47
Identity = 156/339 (46.02%), Postives = 170/339 (50.15%), Query Frame = 1 
Query:  400 LPASLEVQALGTACGAA--LPATLPRXXXXLRIGH--RFNAXLA-LPPTLEFLIIGNSYTHRLDLAALPLKTLHV-GRSYAHALPPLPGTPLPPSLQVLGLHQCHRFNHSLGRLPCTLRKLRLGAAFSHPLLPQHASLLAVQGQQA----LDAESAAEPVQPAPDALVRLPETLTVLGVGEAFDHPLGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------------------------PVVLPRALRELHMGHRFNAPLALPPRLEFLLIGNSYTHRLDLAALSLKRLYVGRSYAHALPPLPG 1305
            LP SLE   L ++ G        LP     L   H   F + L  LP  L  L +G  + H L      L  L + G S   A    P   LPP LQVL L +C+              +LRLG AF+HPLLPQ  SL AVQGQQA    LDAE AAE VQP PDALVRLPE LTVL +GE FDHPLG                                          XXXXXXXXXXXXXXX                             P VLPR LRELHMG  FNAPLALPPRLE L+IG+SYTHRLDLAAL LK+L VGR YAHALPPLPG
Sbjct:  763 LPQSLETLMLSSSLGFPDFTLGALPHSLRTLDTAHFTSFKSALGPLPERLTHLSLGREFNHALGALPAGLIELRIRGDSLGCASFNQPLGALPPLLQVLDLRRCNXXXXXXXXXXXXXXELRLGVAFNHPLLPQQVSLPAVQGQQAVLPALDAELAAEAVQPPPDALVRLPEALTVLHIGEFFDHPLGPLPEGLTELRTHRFTGSCRFIRALGTLPAALRVLDLAACGPFXXXXXXXXXXXXXXXLSRVFAHPLPQLLGRLEVLALGFAFDAALPAVLPRTLRELHMGRGFNAPLALPPRLEVLIIGDSYTHRLDLAALPLKKLAVGRRYAHALPPLPG 1101
[Close]
BLAST of jgi.p|Trimin1|159905 vs. uniprot
Match: A0A835ZIN3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIN3_9STRA)

HSP 1 Score: 172 bits (435), Expect = 3.400e-45
Identity = 125/242 (51.65%), Postives = 137/242 (56.61%), Query Frame = 1 
Query:    1 LPPSLRVLDLNDREFFNHALGR----------------------LPRTLRKLRLGAAFNHTLLPQAALLXXXXXXXXXXXXXXXXXGPLPEGLVELR---AHSFSRDCCFSRALGPLPAALRILDLARCTXXXXXXXXXXXXXXELRLGGAFDQPLPQLPASLEVQALGTACGAALPATLPRXXXXLRIGHRFNAXLALPPTLEFLIIGNSYTHRLDLAALPLKTLHVGRSYAHALPPLPGT 651
            LP SL  L L+   + N ALG                       LP +L +L L ++FNH L                        G LP  L ELR    HS    C F R LGPLP +L +++LA C  XXXXXXXXXXXXX   LG AFDQPLPQLPA LEV  LG A GAALPA LPRXX  L +GH FNA LALPP LE LIIGN YTHRLDLAALPL+ L VG SY HALP LP T
Sbjct:  206 LPQSLEALTLSSDMYVNLALGXXXXXXXTFDASHFDVVHSMVQPLPESLTQLSLSSSFNHAL------------------------GALPRSLQELRITNTHSQWGTCVFDRPLGPLPPSLHVVNLAACVTXXXXXXXXXXXXXXXXLGPAFDQPLPQLPAGLEVLVLGAAFGAALPAALPRXXRELHMGHHFNAPLALPPVLEVLIIGNRYTHRLDLAALPLRVLRVGGSYRHALPLLPRT 423
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BLAST of jgi.p|Trimin1|159905 vs. uniprot
Match: A0A835ZAG2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAG2_9STRA)

HSP 1 Score: 131 bits (329), Expect = 3.860e-29
Identity = 127/240 (52.92%), Postives = 130/240 (54.17%), Query Frame = 1 
Query:    7 PSLRVLDLNDREFFNHALGRLPRTLRKLRLGAAFN--------HTLLPQA-----------------ALLXXXXXXXXXXXXXXXXXGPLPEGLVELRAHSFSRDCCFSRALGPLPAALRILDLARCTXXXXXXXXXXXXXXELRLGGAFDQPLPQLPASLEVQALGTACGAALPATLPRXXXXLRIGHRFNAXLALPPTLEFLIIGNSYTHRLDLAALPLKTLHVGRSYAHALPPLPGT 651
            PSLRVLDL+    F                  AFN        H LLP A                 A  XXXXXXXXXXXXXXXX GPLPEGL EL+  SF RD CF         ALRILDL       XXXXXXXXXXXELRLGGAFDQPLPQ                ALPA LP XXXX         XL L P LE L +G SYTHRLDLAAL LK LHVGR Y HALPPLPGT
Sbjct:  586 PSLRVLDLHQCYRFXXXXXXXXXXXXXXXXXDAFNQPLLHQPTHALLPPAFNAALAADPLRPAPDASAXXXXXXXXXXXXXXXXXXLGPLPEGLAELQVGSFGRDGCFXXXXXXXXXALRILDLTTRAACDXXXXXXXXXXXELRLGGAFDQPLPQXXXXXXXXXXXXXXXXALPAALPCXXXXXXXXXXXXXXLTLTPRLEVLTVGASYTHRLDLAALSLKELHVGRKYVHALPPLPGT 825
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BLAST of jgi.p|Trimin1|159905 vs. uniprot
Match: A0A835ZAL1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAL1_9STRA)

HSP 1 Score: 105 bits (261), Expect = 2.250e-21
Identity = 101/218 (46.33%), Postives = 109/218 (50.00%), Query Frame = 1 
Query:    1 LPPSLRVLDLNDREFFNHALGRLPRTLRKLRLGAAFNHTLLPQAALLXXXXXXXXXXXXXXXXXGPLPEGLVELRAHSFSRDCCFSRALGPLPAALRILDLARCTXXXXXXXXXXXXXXELRLGGAFDQPLPQLPASLEVQALGTACGAALPATLPRXXXXLRIGHRFNAXLALPPTLEFLIIG-NSYTHRLDLAALPLKTLHVGRSYAHALPPLPGT 651
            LPP LRVLDL+                   RLGAAF+  L P+ A                    P   G           DC F+RALG LPAA          XXXXXXXXXXXXXXELR+G AFD+PL QLPA LEV  LG A GAALPA L  XXXX         X              + YTHRLDLAALP KTL VG SYAH + PLPGT
Sbjct:  130 LPPLLRVLDLDRCARXXXXXXXXXXXXXXXRLGAAFDRPLPPRRAAPAPAAQQRRHAAALDAPLAPPDAG----------GDCAFARALGALPAAXXXXXXXXXXXXXXXXXXXXXXXXELRVGRAFDRPLAQLPARLEVLGLGQAFGAALPAALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGYTHRLDLAALPRKTLCVGCSYAHEVTPLPGT 337
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BLAST of jgi.p|Trimin1|159905 vs. uniprot
Match: A0A836CJW6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJW6_9STRA)

HSP 1 Score: 101 bits (252), Expect = 2.220e-19
Identity = 109/255 (42.75%), Postives = 116/255 (45.49%), Query Frame = 1 
Query:    1 LPPSLRVLDLNDREFFNHALGRLPRTLRKLRLGAAFNHTLL--PQAAL----------------------------------LXXXXXXXXXXXXXXXXXGPLPEGLVELRAHSFSRDCC-FSRALGPLPAALRILDLARCTXXXXXXXXXXXXXXELRLGGAFDQPLPQLPASLEVQALGTACGAALPATLPRXXXXLRIGHRFNAXLALPPTLEFLIIGNSYTHRLDL-AALPLKTLHVGRSYAHALPPLPGT 651
            LPP+LRVLDL     F            +LRLGAA+N  L   PQ A                                   L                 G LP+GL ELRA+S +  CC F  ALGPLPAALR LDLA C XXXXXXXXXXXXXXELRLG AFDQ               +  GAAL      XXXX         X               YTH LDL AAL L  LHVGRSYAHALPPLPGT
Sbjct:  400 LPPALRVLDLQQCSVFXXXXXXXXXXXXELRLGAAYNWPLAAAPQRAAPPPAAPRQEAALDAVAXXXXXXXXXXXXXAAPAQLPETLTLLHIGEDFTHRLGLLPQGLEELRAYSSAGRCCWFRHALGPLPAALRALDLAACXXXXXXXXXXXXXXXELRLGCAFDQXXXXXXXXXXXXXXXSGFGAALXRAXXXXXXXXXXXXXXXXXXXXXXXXXX---XXXYTHWLDLSAALSLAELHVGRSYAHALPPLPGT 651
[Close]
BLAST of jgi.p|Trimin1|159905 vs. uniprot
Match: A0A835ZB84_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB84_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 1.780e-18
Identity = 80/198 (40.40%), Postives = 90/198 (45.45%), Query Frame = 1 
Query:  367 LGGAFDQPLPQLPASLEVQALGTACGAA--LPATLPRXXXXLRIGH--RFNAXLA-LPPTLEFLIIGNSYTHRLDLAALPLKTLHVGRSYAHALPPLPGTPLPPSLQVLGLHQCHRFNHSLGRLPCTLRKLRLGAAFSHPLLPQHASLLAVQGQQA----LDAESAAEPVQPAPDALVRLPETLTVLGVGEAFDHPLG 933
            L   F   L  LP SLEV  L    G        LP     L   H   FN+ L  LP +L  L +G  + H                               PSL+VL LHQC RFN               GA F+ PLL +HASL AV GQQA    L A  AA+P+QP P ALVRLPETL VL +GEAFDHPLG
Sbjct:  180 LSPGFTVALTVLPQSLEVLTLSCGFGGLNFTLGALPYSLRTLDTTHFLNFNSALGQLPDSLTHLSLGWGFYHXXXXXXXXXXXXXXXXXXXXXX-----XXXXPSLRVLDLHQCCRFNXXXXXXXXXXXXXXXGAVFNQPLLLRHASLPAVHGQQAATQALGARLAADPLQPTPGALVRLPETLAVLHIGEAFDHPLG 372
[Close]
BLAST of jgi.p|Trimin1|159905 vs. uniprot
Match: A0A835ZDY6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDY6_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 1.860e-13
Identity = 50/93 (53.76%), Postives = 58/93 (62.37%), Query Frame = 1 
Query:  667 LQVLGLHQCHRFNHSLGRLPCTLRKLRLGAAFSHPLLPQHASLLAVQGQQAL----DAESAAEPVQPAPDALVRLPETLTVLGVGEAFDHPLG 933
            L+VL ++ C  +N  LGR        RLG AF+ PLLP H  L A+QGQQA     DA  A +P+Q  PD  V LPE LTVL VGEAFDHPLG
Sbjct:  364 LRVLDVNDCE-YNLPLGRXXXXXXXXRLGTAFNQPLLPLHTPLPAMQGQQAALPAHDAGLAEDPLQSVPDMTVLLPEALTVLHVGEAFDHPLG 455
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|159905 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A835ZCN0_9STRA2.690e-232100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZH80_9STRA5.590e-5052.82Sulfhydryl oxidase n=1 Tax=Tribonema minus TaxID=3... [more]
A0A835ZNW3_9STRA9.410e-4952.73Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A835ZDX0_9STRA8.930e-4746.02Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZIN3_9STRA3.400e-4551.65Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZAG2_9STRA3.860e-2952.92Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZAL1_9STRA2.250e-2146.33Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CJW6_9STRA2.220e-1942.75Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZB84_9STRA1.780e-1840.40Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZDY6_9STRA1.860e-1353.76Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_11contigContig_11:919890..925797 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|159905|e_gw1.11.141.1
Hectar predicted targeting categoryother localisation
TranscriptId160227
TrackFilteredModels1
ProteinId159905
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|159905gene_4794Tribonema minus UTEX_B_3156 geneContig_11 919890..925797 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_4794_1exon_4794_1Tribonema minus UTEX_B_3156 exonContig_11 919890..920036 +
exon_4794_2exon_4794_2Tribonema minus UTEX_B_3156 exonContig_11 920133..920637 +
exon_4794_3exon_4794_3Tribonema minus UTEX_B_3156 exonContig_11 925046..925364 +
exon_4794_4exon_4794_4Tribonema minus UTEX_B_3156 exonContig_11 925446..925797 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_4794CDS_4794Tribonema minus UTEX_B_3156 CDSContig_11 919890..920036 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|159905Trimin1|159905|e_gw1.11.141.1Tribonema minus UTEX_B_3156 polypeptideContig_11 919890..925797 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_4794 ID=mRNA_4794|Name=jgi.p|Trimin1|159905|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1323bp|location=Sequence derived from alignment at Contig_11:919890..925797+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
CTCCCGCCGTCGCTGCGGGTGCTCGATTTGAACGATCGCGAGTTCTTCAA
TCACGCGCTGGGCCGTCTGCCCCGCACACTCCGCAAACTGCGCCTCGGCG
CCGCCTTCAACCACACTCTTCTGCCGCAGGCCGCGCTGCTCCCCGCCACG
CTCGCCGTGCTGCAGATCGGCGAGGCCTTTGATCACCCCCTGGGGCCGCT
CCCAGAGGGCCTGGTGGAGTTGCGGGCTCACAGCTTCAGCCGTGACTGCT
GCTTCAGCCGCGCCCTGGGGCCACTGCCTGCTGCGCTACGCATACTCGAT
CTGGCGAGGTGCACCGCGTTCAACCATGCGCTCGGTCGCCTGCCGGATGC
GCTGCGCGAGCTGCGCCTCGGCGGCGCGTTTGACCAGCCACTGCCGCAGC
TCCCCGCGAGCCTCGAGGTGCAGGCGCTGGGGACCGCATGTGGTGCGGCT
CTGCCAGCGACGCTGCCGCGCACGCTGCGCGAGCTGCGCATTGGGCACCG
CTTCAACGCACCGCTGGCGCTGCCGCCGACGCTGGAGTTTCTGATCATCG
GCAACAGCTACACGCACCGGCTTGACTTGGCGGCATTGCCGCTGAAGACG
CTGCACGTTGGCCGGAGCTACGCGCATGCGCTGCCGCCGCTGCCGGGGAC
ACCCCTCCCGCCATCGCTGCAGGTGCTCGGTCTGCACCAGTGCCACCGCT
TCAATCACTCGCTGGGCCGCCTGCCATGCACGCTCCGCAAACTGCGCCTC
GGCGCCGCCTTCAGCCACCCGCTGCTGCCGCAGCACGCATCGCTCCTCGC
CGTGCAGGGCCAGCAGGCACTCGATGCCGAGTCAGCGGCGGAGCCGGTGC
AGCCAGCGCCCGACGCGCTTGTGCGGCTGCCTGAGACCCTCACTGTGCTG
GGTGTGGGCGAGGCCTTCGACCACCCCCTGGGGCTGCTCCCAAAGAGCCT
GACGGAGCTGCGGGTGGACAGCACGTTCAACCATGCGCTCGGTCGCCTGC
CAGACGCGCTATGCGAGCTGCGCCTCGGCGGCGCGTTTGACCAGCCACTG
CCGCAGCTCCCCGCGCGCCTCGAAGTGCTGGCGCTGGGGGATGCGTTTGA
AGCGGCTCTGCCAGTGGTGCTGCCGCGTGCGCTGCGCGAGCTGCACATGG
GGCACCGCTTCAACGCACCGCTGGCGCTGCCGCCGAGGCTGGAGTTTCTG
CTCATCGGCAACAGCTACACGCACCGGCTTGACTTGGCAGCGTTGTCGCT
GAAGAGGCTGTATGTCGGCCGGAGCTACGCGCACGCGCTGCCGCCGCTGC
CGGGGACGCTCGTCATGCGCTGA
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protein sequence of jgi.p|Trimin1|159905

>Trimin1|159905|e_gw1.11.141.1 ID=Trimin1|159905|e_gw1.11.141.1|Name=jgi.p|Trimin1|159905|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=441bp
LPPSLRVLDLNDREFFNHALGRLPRTLRKLRLGAAFNHTLLPQAALLPAT
LAVLQIGEAFDHPLGPLPEGLVELRAHSFSRDCCFSRALGPLPAALRILD
LARCTAFNHALGRLPDALRELRLGGAFDQPLPQLPASLEVQALGTACGAA
LPATLPRTLRELRIGHRFNAPLALPPTLEFLIIGNSYTHRLDLAALPLKT
LHVGRSYAHALPPLPGTPLPPSLQVLGLHQCHRFNHSLGRLPCTLRKLRL
GAAFSHPLLPQHASLLAVQGQQALDAESAAEPVQPAPDALVRLPETLTVL
GVGEAFDHPLGLLPKSLTELRVDSTFNHALGRLPDALCELRLGGAFDQPL
PQLPARLEVLALGDAFEAALPVVLPRALRELHMGHRFNAPLALPPRLEFL
LIGNSYTHRLDLAALSLKRLYVGRSYAHALPPLPGTLVMR*
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mRNA from alignment at Contig_11:919890..925797+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_4794 ID=mRNA_4794|Name=jgi.p|Trimin1|159905|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=5908bp|location=Sequence derived from alignment at Contig_11:919890..925797+ (Tribonema minus UTEX_B_3156 )
CTCCCGCCGTCGCTGCGGGTGCTCGATTTGAACGATCGCGAGTTCTTCAA
TCACGCGCTGGGCCGTCTGCCCCGCACACTCCGCAAACTGCGCCTCGGCG
CCGCCTTCAACCACACTCTTCTGCCGCAGGCCGCGCTGCTCCCCGCCGTG
CAGGGCCAGCAGGCAGCGGCGCCTGCACTCGATGCAGAGCTGGCGGCAGA
CCCGCTGCAGCCAGCGCCTGACGCGCTTGCGCGGCTGCCCGAGACGCTCG
CCGTGCTGCAGATCGGCGAGGCCTTTGATCACCCCCTGGGGCCGCTCCCA
GAGGGCCTGGTGGAGTTGCGGGCTCACAGCTTCAGCCGTGACTGCTGCTT
CAGCCGCGCCCTGGGGCCACTGCCTGCTGCGCTACGCATACTCGATCTGG
CGAGGTGCACCGCGTTCAACCATGCGCTCGGTCGCCTGCCGGATGCGCTG
CGCGAGCTGCGCCTCGGCGGCGCGTTTGACCAGCCACTGCCGCAGCTCCC
CGCGAGCCTCGAGGTGCAGGCGCTGGGGACCGCATGTGGTGCGGCTCTGC
CAGCGACGCTGCCGCGCACGCTGCGCGAGCTGCGCATTGGGCACCGCTTC
AACGCACCGCTGGCGCTGCCGCCGACGCTGGAGTTTCTGATCATCGGCAA
CAGCTACACGCACCGGCTTGACTTGGCGGCATTGCCGCTGAAGACGCTGC
ACGTTGGCCGGAGCTACGCGCATGCGCTGCCGCCGCTGCCGGGGACACGT
GTCACCCGCTGAGCCGGGCGCCCATAGGAGGACACGAAGCGCCGGACCTT
GCTTTTAGCGGGGTATGGGGGGGGGGGCTTGTTGGGCAGCCGCTGCGCTG
CAGTGGTGCGCGTCTTGCAGCGCGTGCAACAGCGCTCAGCACGTGCAACA
CGCGGAGTGCTGCGCTGAGCAGCTCAGGTGCGCACTTTGAGCGGGGCGTG
CGGTGCTGGTGAGGTGCACTTGCGCCAGAGTTAGAGCTGAGTTAGAGCTG
TTGGGTGATTGATTGCAGGGTCACAAGCAGTAGGATCACTTGACGAACGT
AGAGCAGTGCAGTGATGTGATACGCCTTGTGGAAGCAAGTGCAACCCACA
AAGACAAAGACTTGTATGGTGGCACCATGAAATGCATGCATGAAACAATG
AGCTCTATGTTGCGTGTGTCTGCTGCACACGCCCTCTTTCACGTCTACCT
GCCTCATTCGCAATACTCGCTGCCACCTGGCTCTGCATCAGATGCGCATT
CTGTGGCTGTGCCTAAACGAGTGTTGCCTTGCATGTTGTAGCAATGGCAT
CTGCTGTGAAGCAACAGCAGCATGTTGCGGTTCATGCTCACAACAATGTC
ATGCTCATGTATGCGTCCCGGTTGACCACTGCATATGAGCGGATCGTCAA
GGCAATTGTCGTTTCAACCTGCGATGCTGTCGGTACGCCTGGTGCTCGCT
GCTACCTGCTGCTCGAACCTTGCTCTGACATTGAAGCAGGATGGAACAAT
TTGCACTGCTGGTGGGCCTCACGGCATTGCAGTGGTGACATATGGTGCTG
TGTGCTGGTGCCTGCCTATCATGCTATGAGGCTGCCGTATCACCTTCTGC
CAAGCATGCATCTGTGCATGTTTAAGGCATACTGATGTGTTTGTGCTACT
TTGCCATGATGCTTGGGGAGTGATGCCATATGCTCACAAGCTGCAGCAGC
ATGTATGCGGGCACGCACCACCCTCACCGGCTGCCATGTTCGGATGTACA
ACAGCTTATACGCAATATGCCGCTGTAATCGTCATACGAATGTACGCCAG
ATAGTATGATCGGCACTTGTTCGTTTTGTCGCAACCCTAGTTGAAGCTTT
GCCAATTGCTTAAGCAGCACCAACTTAAATCTGCCACAATATGGTGCCAC
ATTCAAGAAGTTCGTCCGCAATGATGAGTCACTGTTTATGGCGTTGCAAA
GCATTTGTGCACAGAAACCTGCCATGTGCATGTACAACGTGCACTGCTCG
TTAGCAATACAAGCGTGATTGATGTACTTGCAGAAGCAGACTGCTGCTGA
ATCAGACCCTAATTGTAGGACAACTTCCTCATATATCACAATGGTGCCTA
TAGGCCTACCAGTACATAGCATCCGCACAATTGCTCAGAGATCAGATGTC
GACCAACACTTGGTGATCAATGAGATGAAATTCAAACATGCTATGCAAAC
TCAGTACTTGGTACACACTAGCAGGTGCACCATGCAAGCCAACATGCACA
CCAACATCAGCGCTGCAGTGTCACACGGCGCTGCTGCCCCAAGCGAGCCT
CGGGCTTGCGTGCCGTGCTGCGCCCGCTCACGTCCACCAGGCATGGTAGC
CTGTGAACGCTGGAAGCTTGCGGGCGCGTTGCAGACACACCCATATGCCG
CGGACTGTATGTACACCACTGCCTGCAAGCGATATGTGTGCACACTGCAT
CCACACATCATGTGCGGCGCTGCTAATGTACGCCGCTGCGGCATGATGCG
TCGTTGCCGGCTTCATGTTGGACGGGCAAAGCATTAATGCACACCATGTC
CAGCTGTATGTATATGGCCTGTGCAAACTCAGAATGCAACAGGTCGCCTT
ACACACAGTGCAGGCGCAAGTACTTCAAGTCCAGCAGCTGCTGACTAAAT
ATCTCCTACGCTGGCTGCGCCTTGGGCAGGAGCACCTCACTGCACAGCAG
CTTCCACTGTGGCACGACTCCTCTGTACATCAACATGCCCAGGTTGCGTT
TTGCTCGTTTTTTTCACCACTCCCAGCGCGTGCTGGTCTTCCTGGCATCG
AAGCTGCAGGCTTGCCAATGCAGTGGCAGGAGCAGAAGCGGCCGGGCCGC
CCGGCAACATTTAGTTGCCAGCTGCTGCACGCCCCTCCTGCAAGGCTGAT
GCATCTTTAGTTGCAGAAATTATGAAGCATTGCCAACATCTGTTGTGAAG
CGGCATATCCGCCACCAGGGCTGCCATGCAACGCATCAAGGTTGCTTGAC
CCCCCTGCCATCATCTATGCAGGTAGAGGATAAAGCGTCCTGCTGCACCA
GCTAGCTGTGTGCACCCCAAGTCAACTGCTAGTCGGCGCCAATTCACGAG
AAATTTGGTGTCCATGTGTGTCCTCTGATCATTTTGCCCCTCGCATGCGC
AGCGCTAGCTGAAGCACTGCCTCTCCCCAGATTTGCCAGACTTGTCAGCT
TCAGGTGCGCTGTGTCTAATTTCAGGTGTGTTTTTTGTGATTCTTGGCTG
TAGTGCTGTGTCAAGTGCCCATATCATCTTCAATACGGCACTTTAATACG
GCATGAATGTAAGTGGGATATGCTCATGACGTTTACACTGGGGGAAAACA
GCAGTACGCCTGTAGCATGTGCCACCACGTGACAACTCAGCTGACTGCAA
AGGGTTCAGAATGGGGCAATCAGAATGCCACACTCTAATCAGTCATCTGA
AACGAAAACACGCATCGCGGCGTGAACTGCTGAACAGTCAATATAGCGAT
GCAGCAATGCATGGCCATGGATCCCCTGCTCGTAGATGCTTTGTGTAAAC
GATTTTGCAGCCCATACCAAAACGGCTCGCACACAGCACACCTGCCGAAG
GCTGCAGTATGTGTATGAAAGAAGGGGGGCGCATACCAGCCCTGGTGCGA
GAATTTCAGTGTCAGCTCCTCCGTGTTGTCTGAATTCTGGTGCTGCACTT
GGCTAACGCTGCGTGAACTTCCTCGCAGGTGAGGTGGGTGGCAACGTTCC
AGACTCAGGCTTCCCGCTAGTCCTTCGCTATTCTCGCGCTTGTGCCTGCT
CCATTCTGCGAGAATAGACCTCCGCTACCTCCTACTAAAATAAGAGCGCG
AGTACTTTTGTTCAACGTTGACGTTCGATCGGTGGCACTTCAACTTTGGT
CGAAGTGCACTTCAACTATCCTACTTCAACTTCTCGAAGAAGCAAAACTG
GTTGTTTTAGTTTAGCGGCGGGCCATCGTAGTGACCATTGACCTTCGGTA
CAGCAAAACAGTCTAGATTCAAGAAACAGCAAGCCGCCAGCATGGTGCTT
TCATTGAAGCGGGGTAGACGCCGCAATGGTTCCAGCAGCCGTGACCGAGA
CCTGGCGCTTGAGGGAAGTCCTACGGTGGAGGTCTTCAAGATCCTGGCAT
CACTTTCGCTGCTGCCGAAGCCCGGATGGGGCCTCAGCAAAGAGCTGCAG
CGCGAGGTTAAGGTGGCGGAGAAGATCATCGTCCGCACAGAATGCCTGCC
GCCGCCTTTCGGGCATTGCTGCCACCAGGACAGTCAAGCACCTGGTTGTC
CACGGCACAATGCCGCGAGTACACGACATGCCGGACACCATTGGCGCTCT
GGAGCTGCATGGCGTTGGGGGCAGGGCGAAGGCCATGCCGCAGCATCTGC
AATCCCTGACGCTCGTGCTGCCGCAGGGACTGGGCAGTGCATACGCAGCG
GCGTACCTCACCATGCTGCCAGAGACTGTGCGCAGCGTGGCCCTCGACGC
CAGGTACTGTCAGGCAAATAACAGACTGATGGACATTACACTGCCCGCCC
GCTTGCGAACGCTGAGATTGACGCACCTGCGTGAGCTCCCCGCTCTGCCC
ACCTCTCTCACCAGCATCACGTTGGATTCGTGCTCTCTTGGGGCTATCGT
ACAGCTGCCGCCGTCAATGACGGAAGCCACCCTCATTGACACCTGGTGCC
ATGTCGAGCACTCCCCCAGAACAAGCGCCGCAGTCACGGGCCCGTCTCTC
CGCCGCTTGCGGCTGCTGAGGCTGGATTATTCATGGGCGGTTCAGCCGCT
GCCACAGGGCCTCACCGACCTAACCCTCCACTACGAGCGCTACATCTCGC
CATCAAGGACGTCCGTGGCCCTGACAGTGCTGCCGCAGGGCCTGGAGATG
CTCACGCTGTCGTCCGACTTCGCAGTTCCAGATCTCGTGCTCGGCGCTCT
GCCACACAGCCTTGGAACGCGCGATGCAACCCGCTTCACATGCCTCAAAA
GCTATCTGGGCCCGCTGCCCGAGAGCCTTGTTCATCTCAGTTTGGGGAAG
ATTTTCAACCACGCCCTTGGGGCGCTTCCCGCTGCCCTGACAGAGCTGCG
CATCCGCAGCTCGTACAGGCCGTGGGACACCTGCGTCTTCGATCAGCCCC
TTGGAGCCCTCCCGCCATCGCTGCAGGTGCTCGGTCTGCACCAGTGCCAC
CGCTTCAATCACTCGCTGGGCCGCCTGCCATGCACGCTCCGCAAACTGCG
CCTCGGCGCCGCCTTCAGCCACCCGCTGCTGCCGCAGCACGCATCGCTCC
TCGCCGTGCAGGGCCAGCAGGCACTCGATGCCGAGTCAGCGGCGGAGCCG
GTGCAGCCAGCGCCCGACGCGCTTGTGCGGCTGCCTGAGACCCTCACTGT
GCTGGGTGTGGGCGAGGCCTTCGACCACCCCCTGGGGCTGCTCCCAAAGA
GCCTGACGGAGCTGCGGGTGGACAGGTTTAGCCGCGACAGCTGCTTCAGC
CACGCCCTGGGGCCACTGCCTGCGGCACTGCGCATACTCGACCTGCAGGC
GTGCAGCACGTTCAACCATGCGCTCGGTCGCCTGCCAGACGCGCTATGCG
AGCTGCGCCTCGGCGGCGCGTTTGACCAGCCACTGCCGCAGCTCCCCGCG
CGCCTCGAAGTGCTGGCGCTGGGGGATGCGTTTGAAGCGGCTCTGCCAGT
GGTGCTGCCGCGTGCGCTGCGCGAGCTGCACATGGGGCACCGCTTCAACG
CACCGCTGGCGCTGCCGCCGAGGCTGGAGTTTCTGCTCATCGGCAACAGC
TACACGCACCGGCTTGACTTGGCAGCGTTGTCGCTGAAGAGGCTGTATGT
CGGCCGGAGCTACGCGCACGCGCTGCCGCCGCTGCCGGGGACGCTCGTCA
TGCGCTGA
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Coding sequence (CDS) from alignment at Contig_11:919890..925797+

>mRNA_4794 ID=mRNA_4794|Name=jgi.p|Trimin1|159905|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1323bp|location=Sequence derived from alignment at Contig_11:919890..925797+ (Tribonema minus UTEX_B_3156 )
CTCCCGCCGTCGCTGCGGGTGCTCGATTTGAACGATCGCGAGTTCTTCAA
TCACGCGCTGGGCCGTCTGCCCCGCACACTCCGCAAACTGCGCCTCGGCG
CCGCCTTCAACCACACTCTTCTGCCGCAGGCCGCGCTGCTCCCCGCCACG
CTCGCCGTGCTGCAGATCGGCGAGGCCTTTGATCACCCCCTGGGGCCGCT
CCCAGAGGGCCTGGTGGAGTTGCGGGCTCACAGCTTCAGCCGTGACTGCT
GCTTCAGCCGCGCCCTGGGGCCACTGCCTGCTGCGCTACGCATACTCGAT
CTGGCGAGGTGCACCGCGTTCAACCATGCGCTCGGTCGCCTGCCGGATGC
GCTGCGCGAGCTGCGCCTCGGCGGCGCGTTTGACCAGCCACTGCCGCAGC
TCCCCGCGAGCCTCGAGGTGCAGGCGCTGGGGACCGCATGTGGTGCGGCT
CTGCCAGCGACGCTGCCGCGCACGCTGCGCGAGCTGCGCATTGGGCACCG
CTTCAACGCACCGCTGGCGCTGCCGCCGACGCTGGAGTTTCTGATCATCG
GCAACAGCTACACGCACCGGCTTGACTTGGCGGCATTGCCGCTGAAGACG
CTGCACGTTGGCCGGAGCTACGCGCATGCGCTGCCGCCGCTGCCGGGGAC
ACCCCTCCCGCCATCGCTGCAGGTGCTCGGTCTGCACCAGTGCCACCGCT
TCAATCACTCGCTGGGCCGCCTGCCATGCACGCTCCGCAAACTGCGCCTC
GGCGCCGCCTTCAGCCACCCGCTGCTGCCGCAGCACGCATCGCTCCTCGC
CGTGCAGGGCCAGCAGGCACTCGATGCCGAGTCAGCGGCGGAGCCGGTGC
AGCCAGCGCCCGACGCGCTTGTGCGGCTGCCTGAGACCCTCACTGTGCTG
GGTGTGGGCGAGGCCTTCGACCACCCCCTGGGGCTGCTCCCAAAGAGCCT
GACGGAGCTGCGGGTGGACAGCACGTTCAACCATGCGCTCGGTCGCCTGC
CAGACGCGCTATGCGAGCTGCGCCTCGGCGGCGCGTTTGACCAGCCACTG
CCGCAGCTCCCCGCGCGCCTCGAAGTGCTGGCGCTGGGGGATGCGTTTGA
AGCGGCTCTGCCAGTGGTGCTGCCGCGTGCGCTGCGCGAGCTGCACATGG
GGCACCGCTTCAACGCACCGCTGGCGCTGCCGCCGAGGCTGGAGTTTCTG
CTCATCGGCAACAGCTACACGCACCGGCTTGACTTGGCAGCGTTGTCGCT
GAAGAGGCTGTATGTCGGCCGGAGCTACGCGCACGCGCTGCCGCCGCTGC
CGGGGACGCTCGTCATGCGCTGA
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