Trimin1|349074|estExt_Genemark1.C_Ctg_350076 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|349074
Unique NameTrimin1|349074|estExt_Genemark1.C_Ctg_350076
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length310
Homology
BLAST of jgi.p|Trimin1|349074 vs. uniprot
Match: A0A835Z2R4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2R4_9STRA)

HSP 1 Score: 589 bits (1518), Expect = 3.940e-212
Identity = 309/309 (100.00%), Postives = 309/309 (100.00%), Query Frame = 0
Query:    1 MLGRGYWLPVAGVSRGVRAAYTRELLQGGGDSSIGGGCAWLCRTSLSAVLQSDAAFRMALDLSVPAGMDSAAKINDAGLLQLLEESPIARHAVGKEQLSCGLIRDAVTAALPLDGHTLAGAAERGCEAALKQWHALLTAMGVQDCYTADLNAFRQAMGPFGAVXXXXXXXXXXXXVRTDLLYFMKENPGAAVTHTLMDTAIGFRQDEFVTLLSRSHGDVPDLRSVVSLASQFDWPWGPWTSAECEIMRSSAERLIASPSERAECMRLLHELGCPCHARGPTAVATTTLLLRTAEGARDDEVTCRPTCMP 309
            MLGRGYWLPVAGVSRGVRAAYTRELLQGGGDSSIGGGCAWLCRTSLSAVLQSDAAFRMALDLSVPAGMDSAAKINDAGLLQLLEESPIARHAVGKEQLSCGLIRDAVTAALPLDGHTLAGAAERGCEAALKQWHALLTAMGVQDCYTADLNAFRQAMGPFGAVXXXXXXXXXXXXVRTDLLYFMKENPGAAVTHTLMDTAIGFRQDEFVTLLSRSHGDVPDLRSVVSLASQFDWPWGPWTSAECEIMRSSAERLIASPSERAECMRLLHELGCPCHARGPTAVATTTLLLRTAEGARDDEVTCRPTCMP
Sbjct:    1 MLGRGYWLPVAGVSRGVRAAYTRELLQGGGDSSIGGGCAWLCRTSLSAVLQSDAAFRMALDLSVPAGMDSAAKINDAGLLQLLEESPIARHAVGKEQLSCGLIRDAVTAALPLDGHTLAGAAERGCEAALKQWHALLTAMGVQDCYTADLNAFRQAMGPFGAVXXXXXXXXXXXXVRTDLLYFMKENPGAAVTHTLMDTAIGFRQDEFVTLLSRSHGDVPDLRSVVSLASQFDWPWGPWTSAECEIMRSSAERLIASPSERAECMRLLHELGCPCHARGPTAVATTTLLLRTAEGARDDEVTCRPTCMP 309          
BLAST of jgi.p|Trimin1|349074 vs. uniprot
Match: A0A836CE99_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE99_9STRA)

HSP 1 Score: 206 bits (523), Expect = 1.070e-57
Identity = 114/146 (78.08%), Postives = 118/146 (80.82%), Query Frame = 0
Query:    1 MLGRGYWLPVAGVSRGVRAAYTRELLQGGGDSSIGGGCAWLCRTSLSAVLQSDAAFRMALDLSVPAGMDSAAKIN--------DAGLLQLLEESPIARHAVGKEQLSCGLIRDAVTAALPLDGHTLAGAAERGCEAALKQWHALLT 138
            MLGRGYWLPVAGVSRGVRAAYTRELL+G GDS  GGGC WLCRTSL AVLQSDA FRM   LSV AG DSAAKIN        DAGLLQLL+ES  AR AVGK QLSC LIRDAVTA LPLDG+TL GAAERGCEAAL QWH LL+
Sbjct:  151 MLGRGYWLPVAGVSRGVRAAYTRELLKGRGDSGKGGGCVWLCRTSLGAVLQSDAVFRM---LSVAAGTDSAAKINCHLSIPYQDAGLLQLLQESQTARLAVGKGQLSCSLIRDAVTAGLPLDGYTLVGAAERGCEAALNQWHTLLS 293          
BLAST of jgi.p|Trimin1|349074 vs. uniprot
Match: A0A836CBK6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBK6_9STRA)

HSP 1 Score: 155 bits (392), Expect = 1.880e-39
Identity = 89/148 (60.14%), Postives = 100/148 (67.57%), Query Frame = 0
Query:    1 MLGRGYWLPVAGVSRGVRAAYTRELLQGGGDSSIGGG-----CAWLCRTSLSAVLQSDAAFRMALDLS------VPAGMDSAA---KINDAGLLQLLEESPIARHAVGKEQLSCGLIRDAVTAALPLDGHTLAGAAERGCEAALKQWH 134
            MLGRGYWL VA VSRG+R  YTRELL GG  SS GGG     CAWLCRTS+SAVL SDA  RMALD+       VPAG   +    +I+D  L  LL  SP     VG+ QLSC +IRDA++A L +DGH L GAAERGCEAAL QWH
Sbjct:  175 MLGRGYWLTVASVSRGIRTVYTRELLCGGSSSSNGGGSGDSDCAWLCRTSVSAVLHSDAVLRMALDMQAISLNPVPAGTAPSPAGWRISDDSLTTLLNNSPRTMVQVGRAQLSCNMIRDAMSAGLLVDGHALVGAAERGCEAALNQWH 322          
BLAST of jgi.p|Trimin1|349074 vs. uniprot
Match: A0A835Z483_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z483_9STRA)

HSP 1 Score: 127 bits (318), Expect = 1.490e-31
Identity = 68/82 (82.93%), Postives = 70/82 (85.37%), Query Frame = 0
Query:    1 MLGRGYWLPVAGVSRGVRAAYTRELLQGGGDSS-------IGGGCAWLCRTSLSAVLQSDAAFRMALDLSVPAGMDSAAKIN 75
            MLGRGYWLPVAGVSRGVRAAYTRELL+GGGDSS           CAWLCRTSLSAVLQSDA FRMALDL+VPAGMDSAAKIN
Sbjct:  143 MLGRGYWLPVAGVSRGVRAAYTRELLEGGGDSSKXXXXXXXXXXCAWLCRTSLSAVLQSDAVFRMALDLAVPAGMDSAAKIN 224          
BLAST of jgi.p|Trimin1|349074 vs. uniprot
Match: A0A835YRE2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRE2_9STRA)

HSP 1 Score: 129 bits (324), Expect = 4.210e-31
Identity = 120/383 (31.33%), Postives = 146/383 (38.12%), Query Frame = 0
Query:    1 MLGRGYWLPVAGVSRGVRAAYTRELLQGGGDSSIGGGCAWLCRTSLSAVLQSDAAFRMALDLSVPAGMDSAAKINDAGLLQLLEESPIARHAVGKEQLSCGLIRDAVTAALPLDGHTLAGAAERGCEAALKQWHA-------------------LLTAMGVQD-----------------------------------------------CYT----------------ADLNAFR-QAMGPFGAVXXXXXXXXXXXXVRTDLLYFMK--ENPGAAVTH-TLMDTAIGFRQDEFVTLLSR-----------------SH----GDVPDLRSVVSLASQFDWPWGPWTSAECEIMRSSAERLIASPSERAE-CMRLLHELGCPC 275
            MLGRGYWL VA VSRG+RAAYT+ELL                                                 D  L  LL  S       G+ +LSC +I DA+ A L +DGH L GAAERGCEAAL QWH                    +L A+GV++                                                YT                ADL AF+ + + PF A              RTD L F+K     G A T  TLMD+AI F Q+EFV  LSR                 +H    G   D R VV + S    PWGPWTSAEC ++R+  +   A P + A+  M+ LH LGCPC
Sbjct:   41 MLGRGYWLTVASVSRGIRAAYTKELL-------------------------------------------------DGALTTLLNNSSRTMVQAGRAELSCDMIGDAIDAGLDVDGHVLIGAAERGCEAALNQWHLSLSQWPAWHTQLSYVLPVMVLRAIGVKERPEALEVLRWVFNTAISKRAEVQLPQVLLTLLAFKCARYGHFDTFCWLYTEGRRLAQQDITVTVSEADLKAFKDEVLAPFRAA-------------RTDELSFIKVLRTDGTARTLCTLMDSAIWFGQEEFVAALSRIQWLQNEMGADWPHDGAAHIVRKGKDVDARGVVRMVSDLACPWGPWTSAECALLRTRPQHRSAVPPQSAQHWMQQLHALGCPC 361          
BLAST of jgi.p|Trimin1|349074 vs. uniprot
Match: A0A835YNS9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNS9_9STRA)

HSP 1 Score: 127 bits (319), Expect = 3.970e-29
Identity = 81/170 (47.65%), Postives = 95/170 (55.88%), Query Frame = 0
Query:    1 MLGRGYWLPVAGVSRGVRAAYTRELLQGGGDSSIGGG-----------------------CAWLCRTSLSAVLQSDAAFRMALDLS------VPAGMDSAA---KINDAGLLQLLEESPIARHAVGKEQLSCGLIRDAVTAALPLDGHTLAGAAERGCEAALKQWHALLT 138
            MLGRGYWLPVA VSRG+ AAYT+ELL GG   S GG                        CAWLCRT +SA L SD+ FRMALD+       V AG  S+     IND  L  LL   P     VG+  LS  +IRDA+ A + +DGH L GAAERG ++AL QWH  L+
Sbjct:  167 MLGRGYWLPVASVSRGISAAYTKELLCGGSSRSNGGSXXXXXXXXXXXXXXXXXXXXDPDCAWLCRTLVSAALHSDSVFRMALDMQAMPPSPVLAGKASSPARWSINDDSLTTLLSNRPRTMVRVGRAHLSSNVIRDAMDAGMVIDGHALVGAAERGRKSALDQWHQSLS 336          
BLAST of jgi.p|Trimin1|349074 vs. uniprot
Match: A0A835ZIW2_9STRA (DUF4524 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIW2_9STRA)

HSP 1 Score: 122 bits (306), Expect = 2.910e-27
Identity = 73/142 (51.41%), Postives = 90/142 (63.38%), Query Frame = 0
Query:    1 MLGRGYWLPVAGVSRGVRAAYTRELLQGGGDSSIGGGCAWLCRTSLSAVLQSDAAFRMALDLS------VPAGMDSA---AKINDAGLLQLLEESPIARHAVGKEQLSCGLIRDAVTAALPLDGHTLAGAAERGCEAALKQW 133
            MLG G+WL VA VSRGVRAAYTRELL GGG         W  RT++SA LQSD+ FRMALD+       + A M ++    +I+D  L  LL  S  A+ A+G+  LSC  I++A+ A L +D H L GAAERGC AAL QW
Sbjct:   33 MLGHGHWLTVASVSRGVRAAYTRELLSGGGGGGPNCNLKWRSRTTVSAALQSDSTFRMALDIRAGAPDPILAAMTTSPAYGRIHDGALALLLSSSARAKVALGRAALSCVAIQEAMAAQLMVDAHVLLGAAERGCVAALDQW 174          
BLAST of jgi.p|Trimin1|349074 vs. uniprot
Match: A0A836C8W5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8W5_9STRA)

HSP 1 Score: 106 bits (265), Expect = 4.480e-22
Identity = 67/143 (46.85%), Postives = 84/143 (58.74%), Query Frame = 0
Query:    1 MLGRGYWLPVAGVSRGVRAAYTRELLQGGGDSSIG--------GGCAWLCRTSLSAVLQSDAAFRMALDL-SVPAGMDSAAKINDAGLLQLLEESPIARHAVGKEQ-LSCGLIRDAVTAALPLDGHTLAGAAERGCEAALKQW 133
            MLG GYWL VA ++RG+RAAYT+ELL  G  SS          G C WLCRT+LS VLQSD+ FRMALD+ ++P                     P    A+G+   LSC +I++A+ A L +DG  L GAAER CE+AL QW
Sbjct:   74 MLGPGYWLIVASINRGIRAAYTKELLSWGASSSXXXXGGRSSDGDCTWLCRTALSVVLQSDSVFRMALDIRAIP---------------------PAVHVALGRAAALSCVMIQEAMDAQLTVDGTVLIGAAERCCESALDQW 195          
BLAST of jgi.p|Trimin1|349074 vs. uniprot
Match: A0A835YYU8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYU8_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 5.160e-18
Identity = 47/68 (69.12%), Postives = 49/68 (72.06%), Query Frame = 0
Query:  220 PDLRSVVSLASQFDWPWGPWTSAECEIMRSSAER-------LIASPSERAECMRLLHELGCPCHARGP 280
            PD RSVV L S+   PWGPWTSAECEIMRS+AER       LIASPSERAE MR LHELGCPC    P
Sbjct:  286 PDPRSVVCLVSELGCPWGPWTSAECEIMRSNAERMRSNAEWLIASPSERAELMRRLHELGCPCACARP 353          
BLAST of jgi.p|Trimin1|349074 vs. uniprot
Match: A0A835ZHS9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHS9_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 4.390e-13
Identity = 42/62 (67.74%), Postives = 46/62 (74.19%), Query Frame = 0
Query:    1 MLGRGYWLPVAGVSRGVRAAYTRELLQGGGDSSIGGGCAWLCRTSLSAVLQSDAAFRMALDL 62
            MLG G+WL VA VSR VRAAYTRELL  GG S       WL RT++SA LQSDAAFRMALD+
Sbjct:  176 MLGHGHWLTVASVSRAVRAAYTRELLSIGGGSGPNCNLKWLTRTAISAALQSDAAFRMALDI 237          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349074 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
A0A835Z2R4_9STRA3.940e-212100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CE99_9STRA1.070e-5778.08Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CBK6_9STRA1.880e-3960.14Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z483_9STRA1.490e-3182.93Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YRE2_9STRA4.210e-3131.33Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YNS9_9STRA3.970e-2947.65Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZIW2_9STRA2.910e-2751.41DUF4524 domain-containing protein n=1 Tax=Tribonem... [more]
A0A836C8W5_9STRA4.480e-2246.85Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YYU8_9STRA5.160e-1869.12Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZHS9_9STRA4.390e-1367.74Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_35contigContig_35:697582..700625 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349074mRNA_7759Tribonema minus UTEX_B_3156 mRNAContig_35 697436..700625 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|349074|estExt_Genemark1.C_Ctg_350076 ID=Trimin1|349074|estExt_Genemark1.C_Ctg_350076|Name=jgi.p|Trimin1|349074|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=310bp
MLGRGYWLPVAGVSRGVRAAYTRELLQGGGDSSIGGGCAWLCRTSLSAVL
QSDAAFRMALDLSVPAGMDSAAKINDAGLLQLLEESPIARHAVGKEQLSC
GLIRDAVTAALPLDGHTLAGAAERGCEAALKQWHALLTAMGVQDCYTADL
NAFRQAMGPFGAVNAFVRAMGPFGTVRTDLLYFMKENPGAAVTHTLMDTA
IGFRQDEFVTLLSRSHGDVPDLRSVVSLASQFDWPWGPWTSAECEIMRSS
AERLIASPSERAECMRLLHELGCPCHARGPTAVATTTLLLRTAEGARDDE
VTCRPTCMP*
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