mRNA_6006 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|348976
Unique NamemRNA_6006
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|348976 vs. uniprot
Match: A0A835YV89_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV89_9STRA)

HSP 1 Score: 952 bits (2460), Expect = 0.000e+0
Identity = 635/635 (100.00%), Postives = 635/635 (100.00%), Query Frame = 1 
Query:    1 MVWAALRVMATVTPKSRMLGLSMPLHASDTGNVMTEQEAAAAAESYVAGHLHGSALVRIGTNDADAEAQLASVSGDTATLTADWPGSAVTKVHLTVMHIXXXXXXXXXXXXXXXKGAIWKHAVASRKQPYIELLLASEREKRVTGXXXXXSGGIHTAGFQTVYKAMAGDEVHCPICLGSVVRPCVTMCVHVYCRECIGAELDIRLHQPTHVPKCPLCRRDVNPGDVCELQLDTTEEDPDAQQHDSAQQHNRAREDDDHAPSAAAKPYKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASPKPASSLRQSRRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAIGTGSSVTLPDLSRAWRAPLGDTDLQAIPPPPGAPLHLRDPSAPSLDPLFLAHWRAASAAGAVGAKLRALIGDMRAVLRREPAAKFVVFSAAAEALAKAAEELNRATLKCVTISGAVSVARRGAAVTEFNTDPSVRVVLLAMGSAAAGLTLTAASTVYMLEPAFNAADEAQXXXXXXXXXEAQPXXXXXXXXXALSRAHRIGQTHSVRCVIFYCAGTLEERLLALRHESGGLASLLSGSGALTGLAEDSAEVSHLLSLPNLQRLLGVTDSQLRR 1905
            MVWAALRVMATVTPKSRMLGLSMPLHASDTGNVMTEQEAAAAAESYVAGHLHGSALVRIGTNDADAEAQLASVSGDTATLTADWPGSAVTKVHLTVMHIXXXXXXXXXXXXXXXKGAIWKHAVASRKQPYIELLLASEREKRVTGXXXXXSGGIHTAGFQTVYKAMAGDEVHCPICLGSVVRPCVTMCVHVYCRECIGAELDIRLHQPTHVPKCPLCRRDVNPGDVCELQLDTTEEDPDAQQHDSAQQHNRAREDDDHAPSAAAKPYKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASPKPASSLRQSRRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAIGTGSSVTLPDLSRAWRAPLGDTDLQAIPPPPGAPLHLRDPSAPSLDPLFLAHWRAASAAGAVGAKLRALIGDMRAVLRREPAAKFVVFSAAAEALAKAAEELNRATLKCVTISGAVSVARRGAAVTEFNTDPSVRVVLLAMGSAAAGLTLTAASTVYMLEPAFNAADEAQXXXXXXXXXEAQPXXXXXXXXXALSRAHRIGQTHSVRCVIFYCAGTLEERLLALRHESGGLASLLSGSGALTGLAEDSAEVSHLLSLPNLQRLLGVTDSQLRR
Sbjct:    1 MVWAALRVMATVTPKSRMLGLSMPLHASDTGNVMTEQEAAAAAESYVAGHLHGSALVRIGTNDADAEAQLASVSGDTATLTADWPGSAVTKVHLTVMHIXXXXXXXXXXXXXXXKGAIWKHAVASRKQPYIELLLASEREKRVTGXXXXXSGGIHTAGFQTVYKAMAGDEVHCPICLGSVVRPCVTMCVHVYCRECIGAELDIRLHQPTHVPKCPLCRRDVNPGDVCELQLDTTEEDPDAQQHDSAQQHNRAREDDDHAPSAAAKPYKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASPKPASSLRQSRRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAIGTGSSVTLPDLSRAWRAPLGDTDLQAIPPPPGAPLHLRDPSAPSLDPLFLAHWRAASAAGAVGAKLRALIGDMRAVLRREPAAKFVVFSAAAEALAKAAEELNRATLKCVTISGAVSVARRGAAVTEFNTDPSVRVVLLAMGSAAAGLTLTAASTVYMLEPAFNAADEAQXXXXXXXXXEAQPXXXXXXXXXALSRAHRIGQTHSVRCVIFYCAGTLEERLLALRHESGGLASLLSGSGALTGLAEDSAEVSHLLSLPNLQRLLGVTDSQLRR 635
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BLAST of jgi.p|Trimin1|348976 vs. uniprot
Match: D7G2K8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2K8_ECTSI)

HSP 1 Score: 181 bits (459), Expect = 8.280e-44
Identity = 247/637 (38.78%), Postives = 327/637 (51.33%), Query Frame = 1 
Query:  169 VRIGTNDADAEAQLASVSGDTATLTADWPGSAVTKVHLTVMHIXXXXXXXXXXXXXXXKGAIWKHAVASRKQPYIELLLASEREKRVTGXXXXXSGGIHTAGFQTVYKAMAGDEVHCPICLGSVVRPCVTMCVHVYCRECIGAELD-------IRLHQPTHVPKCPLCRRDVNPGDVCELQLDTTEEDPDAQQHDSAQQHNRAREDDDHAPSAAAKPYKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASPKPASSLRQSRRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAIGTGSSVTLPDLSRA-------------------------------------------WRAPLGDTDLQAIPPPPGAPLHLRDPSAPSLDPLFLAHWRAASAAGAVGAKLRALIGDMRAVLRREPAAKFVVFSAAAEALAKAAEELNRATLKCVTISGAVSVARRGAAVTEFNTDPSVRVVLLAMGSAAAGLTLTAASTVYMLEPAFNAADEAQXXXXXXXXXEAQPXXXXXXXXXALSRAHRIGQTHSVRCVIFYCAGTLEERLLALRHESGGLASLLSGSGALTGLAED-----------SAEVSHLLSLPNLQRLLGVTDSQ 1896
            +R+G N  D EA +  +   +ATL  +W   AV                          G++++ + ++R++PY++LL+AS++ K+ T         +  AGF  +YKAMAG+ V CPIC+ SVVRP VT C H++CRECI  EL        I+L Q     KCP+CRR +   ++ ELQ  +  E+  A    SA  ++                   XXXXXXXXXXXXXXXXXXXXXXXXXXXXX                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A   G SV      R                                                    +     P    P     P+A +    FL+ +RAA+++ +   KL AL+ D+   L  +P AKFV+FS   + + +A   L+   ++  +I G  +   R +AV+ F  DPS++V+LL  GSAAAGLTLTAASTVYML+P ++AADEAQ                      AL+RAHRIGQTH+VRCV+FY   ++EERLLALRH  G  A  L  + ++  LA             S+   ++ +LP L++L G+  SQ
Sbjct:  958 IRVGVNSEDNEATIEDIGERSATLACEWSEGAVKA------------------------GSVYRFSTSTRRKPYVDLLVASDKAKKDTE--------VQVAGFSAIYKAMAGEPVSCPICMCSVVRPTVTKCAHLFCRECISRELQRTPALGMIQLPQA----KCPICRRTMKGSEMMELQTLSEVEEAMAIDASSAADNSSGDAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARSNGGSVAASSNERGGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDGVAGPSLVIPTFRFTPTATAT---FLSQYRAATSSQS-SVKLDALVRDLDTTLLHDPTAKFVIFSQYPQVVDRAGIVLSARGIRSTSIVGGRTRVERSSAVSSFTNDPSIKVILLTTGSAAAGLTLTAASTVYMLDPVWSAADEAQ----------------------ALNRAHRIGQTHTVRCVVFYMKDSVEERLLALRHSKGNFAQFLESADSVVSLAAPEGSGSGSSSPLSSSFVNMFALPELKKLFGMVGSQ 1532
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BLAST of jgi.p|Trimin1|348976 vs. uniprot
Match: A0A6H5JHY1_9PHAE (Helicase C-terminal domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY1_9PHAE)

HSP 1 Score: 164 bits (416), Expect = 1.100e-39
Identity = 108/256 (42.19%), Postives = 150/256 (58.59%), Query Frame = 1 
Query: 1162 AIPPPPGAPLHLRDPSAPSLDPLFLAHWRAASAAGAVGAKLRALIGDMRAVLRREPAAKFVVFSAAAEALAKAAEELNRATLKCVTISGAVSVARRGAAVTEFNTDPSVRVVLLAMGSAAAGLTLTAASTVYMLEPAFNAADEAQXXXXXXXXXEAQPXXXXXXXXXALSRAHRIGQTHSVRCVIFYCAGTLEERLLALRHESGGLASLLSGSGALTGLAED-----------SAEVSHLLSLPNLQRLLGVTDSQ 1896
            AIPPP   P   RD + PSL+  FL+ +RAA+++ +   KL AL+ D+   L  +P AKFV+FS   + + +A   L+   ++  +I G  +   R +AV+ F  DPS+RV+LL  GSAAAGLTLTAASTVYML+P ++AADEAQ                      AL+RAHRIGQTH+VRCV+FY   ++EERLLALRH  G  A  L  + ++  LA             S+   ++ +LP L++L G+  SQ
Sbjct:  208 AIPPPVMFP---RDNTVPSLEQTFLSQYRAATSSQS-SVKLDALVRDLDTTLLHDPTAKFVIFSQYPQVVDRAGIVLSARGIRSTSIVGGRTRVERSSAVSSFTNDPSIRVILLTTGSAAAGLTLTAASTVYMLDPVWSAADEAQ----------------------ALNRAHRIGQTHTVRCVVFYMKDSVEERLLALRHSKGNFAQFLESADSVVSLAAPEGSGSGSPSPLSSSFVNMFALPELKKLFGMVGSQ 437
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BLAST of jgi.p|Trimin1|348976 vs. uniprot
Match: A0A4D9D770_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D770_9STRA)

HSP 1 Score: 147 bits (372), Expect = 2.680e-33
Identity = 145/530 (27.36%), Postives = 227/530 (42.83%), Query Frame = 1 
Query:  343 KGAIWKHAVASRKQPYIELLLASEREKRVTGXXXXXSGGIHTAGFQTVYKAMAGDEVHCPICLGSVVRPCVTMCVHVYCRECIGAELDIRLHQ----------PTHVPKCPLCRRDVNPGDVCELQLDTTEEDPDAQQHDSAQQHNRAREDDDHAPSAAAKPYKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASPKPASSLRQSRRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAIGTGSSV-TLPDLSRAWRAPLGD-TDLQAIPPPPGAPLHLRDPSAPSLDPLFLAHWRAASAAGAVGAKLRALIGDMRAVLRREPAAKFVVFSAAAEALAKAAEELNRATLKCVTISGAVSVARRGAAVTEFNTDPSVRVVLLAMGSAAAGLTLTAASTVYMLEPAFNAADEAQXXXXXXXXXEAQPXXXXXXXXXALSRAHRIGQT-HSVRCVIFYCAGTLEERLLALRHESGGLASLLSGSGALTGLAEDSAEVSHLLSLPNLQRLLGVTDS 1893
            K  ++K   A+RK+ Y +LLLA E+E++        +  +H AGF +++  + G ++ CPICL ++  P VT C HVYC+ CI A+++    Q             V +C +CR+ V+   +  ++LDT+          S +++  A E+ D   +A                                    A P+  S                                                      ++   GS++  + ++ +    P  D   LQ +P P       RD S PSL+P FLAH+R  S   +  AK++AL+G + + L  +P+AKFVVFS       K    L++    CV+++    +A R  AV  F++DP V+V+L+ MG  AAGLTLTAAST+ +LEP+ N  DEAQ                      A+SR HRIGQ   SV   + +   T+EER+L +R + G          A   +     + SH  SL + Q  LG+ ++
Sbjct:  308 KALVFKRGPATRKKAYADLLLAKEKEQK------GLTDQLHEAGFASIFAVLEGGDLSCPICLCTISEPTVTQCCHVYCQSCILAQIEEAQKQHELHGGYGGLANLVTRCAVCRKPVSQKTL--MRLDTS----------SIERYEAAAEEVDGKVAAGVTRAGAVSNAADAESGPGGGGKGNVGESMDVKMPPALPRNRSG---------------NGDDVADRRGETEVVDAHPAEHGGRASRQCRSAGAPSPSSPSRGSAIRAVMNIPQVGCPPAADEATLQRLPAPFACG---RDNSLPSLEPAFLAHYRNTSMVPS--AKMQALVGILESTLSSDPSAKFVVFSQFPFTTVKPC--LDQHGFACVSVTAQCKMADRQQAVGAFSSDPDVKVILVGMGVGAAGLTLTAASTLILLEPSHNLGDEAQ----------------------AMSRIHRIGQAASSVEIFVLFTPRTVEERMLKVRQDQGHAFLQCGDDSAALSVTSGGDKGSHF-SLASFQAFLGLGEA 774
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BLAST of jgi.p|Trimin1|348976 vs. uniprot
Match: A0A7S0S928_9CHLO (Hypothetical protein (Fragment) n=3 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0S928_9CHLO)

HSP 1 Score: 98.2 bits (243), Expect = 1.990e-17
Identity = 81/195 (41.54%), Postives = 97/195 (49.74%), Query Frame = 1 
Query: 1231 FLAHWRAASAAGAVGAKLRALIGDMRAVLRREPAA-KFVVFSAAAEALAKAAEELNRATL--KCVTISGAVSVARRGA--------------AVTEFNTDPSVRVVLLAMGSAAAGLTLTAASTVYMLEPAFNAADEAQXXXXXXXXXEAQPXXXXXXXXXALSRAHRIGQTHSVRCVIFYCAGTLEERLLALRH 1764
            FLAH     AA     K+ AL+ D+R  L R  AA K VVFS   +ALA A   L    +  + V + G  S AR GA              A+  F  DP V+V+LL  GSAAAGLTLT A  V +LEP  +A DEAQ                      A +R HRIGQT  VRCV ++  GT+EERLLA R 
Sbjct:  679 FLAHCH--RAAMRRSPKINALVADLREALNRPGAAGKVVVFSQQRDALAHADAALTGEGIGTESVGVKGVRSAARDGAVAGGGAGKQGDYEGAIQRFRDDPDVKVLLLHAGSAAAGLTLTQADLVVLLEPFLSAGDEAQ----------------------AANRVHRIGQTRPVRCVTYFVEGTVEERLLAYRQ 849
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BLAST of jgi.p|Trimin1|348976 vs. uniprot
Match: A0A7S2L8N4_9DINO (Hypothetical protein n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2L8N4_9DINO)

HSP 1 Score: 90.1 bits (222), Expect = 1.230e-16
Identity = 60/188 (31.91%), Postives = 101/188 (53.72%), Query Frame = 1 
Query: 1279 KLRALIGDMRAVLRREPAAKFVVFSAAAEALAKAAEELNRATLKCVTISGAVSVARRGAAVTEFNTDPSVRVVLLAMGSAAAGLTLTAASTVYMLEPAFNAADEAQXXXXXXXXXEAQPXXXXXXXXXALSRAHRIGQTHSVRCVIFYCAGTLEERLLALRHESGGLASLLSGSGALTGLAEDSAEVS 1842
            K+ AL+ ++  +++ + + K +VFS     L      L RA + CV + G +++  R  ++T FN+DPS+RV+L+++ +   GL L  A+ V++L+P +N A E Q                      A+ RAHRIGQT  V+ V F  AGT+EE+++AL+ +       L   GA+ G A   A+++
Sbjct:   60 KIEALVDEVNKMMQGDASNKCIVFSQFGAMLELVEFRLKRAGIACVVLRGGMTMQARNDSLTAFNSDPSLRVILISLKAGGEGLNLQIANHVFLLDPWWNPACEMQ----------------------AIQRAHRIGQTREVKAVRFITAGTVEEKIVALQEKK-----QLVFDGAIDGSAASIAKLT 220
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BLAST of jgi.p|Trimin1|348976 vs. uniprot
Match: F0XXK2_AURAN (FHA domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XXK2_AURAN)

HSP 1 Score: 93.2 bits (230), Expect = 1.170e-15
Identity = 76/211 (36.02%), Postives = 107/211 (50.71%), Query Frame = 1 
Query: 1138 PLGDTDLQAIPPPPGAPLHLRDPS-APSLDPLFLAHWRAASAAGAVGAKLRALIGDMRAVLRREPAAKFVVFSAAAEALAKAAEELNRATLKCVTISGAVSVARRGAAVTEFNTDPSVRVVLLAMGSAAAGLTLTAASTVYMLEPAFNAADEAQXXXXXXXXXEAQPXXXXXXXXXALSRAHRIGQTHSVRCVIFYCAGTLEERLLALRHE 1767
            P GD DL A+  P G P  L +    P++     AH  AA    +  AK+  L+ D+ A +R +   K VV ++   A+   +  L+RA L+ VT+S   S A   AAV E+       V +L  G+AAAGLTLTAA+ +++LEP  +  +EAQ                      A++R HRIGQ   VR   +Y  GT+EERLLA R +
Sbjct: 2868 PCGDADLDALELPRGGPARLANRHLTPNIPNALGAHLEAAREVPS--AKIARLLRDIDAAIRGKVNEKVVVVTSIKPAVRHVSLALDRAGLRHVTLSRGDSAAALSAAVREWRERDDCAVFVLHAGAAAAGLTLTAAAHLFLLEPFLSVGEEAQ----------------------AMNRCHRIGQQRDVRTTAYYLRGTVEERLLAYRAQ 3054
[Close]
BLAST of jgi.p|Trimin1|348976 vs. uniprot
Match: A0A8J2SKG9_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SKG9_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 1.730e-15
Identity = 76/217 (35.02%), Postives = 106/217 (48.85%), Query Frame = 1 
Query: 1174 PPGAPLHLRDPSA-PSLDPLFLAHWRAASAAGAVGAKLRALIGDMRAVLRREPAAKFVVFSAAAEALAKAAEELNRATLKCVTISGAVSVARRGAAVTEFNTDPSVRVVLLAMGSAAAGLTLTAASTVYMLEPAFNAADEAQXXXXXXXXXEAQPXXXXXXXXXALSRAHRIGQTHSVRCVIFYCAGTLEERLLALRHESGGLASLLSGSGALTGLA 1821
            PP  P+ L D  A P++ P  LAH    +A  A   K++ L+ D+ A +   PA K VV S+   A+      L  A L CV+++   S      AV ++  DP   V +L  G+AAAGLTLTAA  +++LEP  +  +EAQ                      A++R HRIGQ  SV    ++  GT EERL+A R      A    G+ AL+ LA
Sbjct: 1378 PPSVPVRLADRHAYPNIPPNLLAH--ILTARQAPSTKMKRLLRDVTAAIAGGPAEKAVVVSSIKPAVQHCVLALKGAGLDCVSVAKGDSADAMQEAVKKWREDPDCAVFVLHAGAAAAGLTLTAARHLFLLEPFLSVGEEAQ----------------------AMNRCHRIGQERSVSTTSYFLRGTAEERLIAYRSREAQAAGGGGGTDALSVLA 1570
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BLAST of jgi.p|Trimin1|348976 vs. uniprot
Match: A0A7S1C4N2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C4N2_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 3.120e-14
Identity = 61/168 (36.31%), Postives = 93/168 (55.36%), Query Frame = 1 
Query: 1267 AVGAKLRALIGDMRAVLRREPAAKFVVFSAAAEALAKAAEELNRATLKCVTISGAVSVARRGAAVTEFNTDPSVRVVLLAMGSAAAGLTLTAASTVYMLEPAFNAADEAQXXXXXXXXXEAQPXXXXXXXXXALSRAHRIGQTHSVRCVIFYCAGTLEERLLALRHES 1770
            A G+K+  L+ +++A+ +     K VVF+  A +  +  + L +A ++C++ISG  S  +R A++  F +DP+ RV +L++ S+A GLTL AAS VY++EP  N A EAQ                      A+ R HR+GQT SV  V     GT+EER+L L   S
Sbjct:  352 APGSKIERLVQEIKALDKDR---KVVVFTQFASSHERLMDVLPKAGIECLSISGGDSQTKREASLNAFISDPTKRVFVLSLRSSAVGLTLVAASVVYLMEPGENTALEAQ----------------------AIGRIHRLGQTRSVEVVKLVAKGTVEERILQLNQVS 494
[Close]
BLAST of jgi.p|Trimin1|348976 vs. uniprot
Match: A0A7S0N6K2_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0N6K2_9CRYP)

HSP 1 Score: 78.6 bits (192), Expect = 6.780e-14
Identity = 47/113 (41.59%), Postives = 64/113 (56.64%), Query Frame = 1 
Query: 1441 ARRGAAVTEFNTDPSVRVVLLAMGSAAAGLTLTAASTVYMLEPAFNAADEAQXXXXXXXXXEAQPXXXXXXXXXALSRAHRIGQTHSVRCVIFYCAGTLEERLLALRHESGGL 1779
            A++  AV +F++ P V V LL  G AAAGLTLTAA+ V+++EP  N  +EAQ                      A++R HRIGQT  V+C ++Y  GT +ER+LA R   G L
Sbjct:   16 AKQEQAVADFSSRPDVAVFLLHAGQAAAGLTLTAAAHVFLMEPFMNPGEEAQ----------------------AMNRCHRIGQTRPVQCTVYYAPGTADERILAYRAAHGRL 106
[Close]
BLAST of jgi.p|Trimin1|348976 vs. uniprot
Match: A0A835Z1M1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1M1_9STRA)

HSP 1 Score: 149 bits (375), Expect = 3.170e-43
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 3 
Query:  450 MRAPSPATARAPSSALLRWWACARRGKQAQNSRGLDACPWWRQQCPGARTSVTTGARLISNMCGAHASLEG 662
            MRAPSPATARAPSSALLRWWACARRGKQAQNSRGLDACPWWRQQCPGARTSVTTGARLISNMCGAHASLEG
Sbjct:    1 MRAPSPATARAPSSALLRWWACARRGKQAQNSRGLDACPWWRQQCPGARTSVTTGARLISNMCGAHASLEG 71
[Close]
BLAST of jgi.p|Trimin1|348976 vs. uniprot
Match: A0A835Z722_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z722_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 1.810e-10
Identity = 46/87 (52.87%), Postives = 52/87 (59.77%), Query Frame = 2 
Query:  269 YFLPDILQRAIIYV*AGARRH-ELLVGKSVVVQTQQRFKDD-VGDPPGQL-TVKFNITIISKDNAGAITSYGQGPE*CIAALVGMRA 520
            Y LP+ LQR + Y+   A        GK   VQT QRFKDD +GDP     TVKFNIT I KD AGA+TS GQG    + AL GMRA
Sbjct:  417 YLLPNFLQRTMPYLFELAPDGMSYQWGKVCFVQTPQRFKDDGIGDPLANWGTVKFNITNIGKDGAGAVTSCGQGSVWRVDALSGMRA 503
[Close]
BLAST of jgi.p|Trimin1|348976 vs. uniprot
Match: A0A835Z7S9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7S9_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 3.450e-7
Identity = 41/88 (46.59%), Postives = 48/88 (54.55%), Query Frame = 2 
Query:  269 YFLPDILQRAIIYV*AGARRHELLV-------GKSVVVQTQQRFKDD-VGDPPGQL-TVKFNITIISKDNAGAITSYGQGPE*CIAAL 505
            Y LPD LQR + Y+       EL         GK   VQT QRFKDD +G+P      VKFNIT + KD AGA+TS GQG    + AL
Sbjct:  597 YLLPDFLQRTVPYL------FELTPDGMGYQWGKVCFVQTPQRFKDDGIGNPLANWGAVKFNITNVGKDGAGAVTSCGQGAVWRVDAL 678
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348976 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YV89_9STRA0.000e+0100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7G2K8_ECTSI8.280e-4438.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JHY1_9PHAE1.100e-3942.19Helicase C-terminal domain-containing protein n=1 ... [more]
A0A4D9D770_9STRA2.680e-3327.36Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S0S928_9CHLO1.990e-1741.54Hypothetical protein (Fragment) n=3 Tax=Mantoniell... [more]
A0A7S2L8N4_9DINO1.230e-1631.91Hypothetical protein n=1 Tax=Brandtodinium nutricu... [more]
F0XXK2_AURAN1.170e-1536.02FHA domain-containing protein n=1 Tax=Aureococcus ... [more]
A0A8J2SKG9_9STRA1.730e-1535.02Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A7S1C4N2_9STRA3.120e-1436.31Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A7S0N6K2_9CRYP6.780e-1441.59Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]

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BLAST of jgi.p|Trimin1|348976 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A835Z1M1_9STRA3.170e-43100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A835Z722_9STRA1.810e-1052.87Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z7S9_9STRA3.450e-746.59Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_33contigContig_33:909247..920483 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|348976|estExt_Genemark1.C_Ctg_330120
BRITEko00000,ko01000,ko03400,ko04121
KEGG koko:K15710,ko:K15711
EC2.3.2.27
Descriptionpyrimidine dimer repair by nucleotide-excision repair
COG categoryE
Max annot lvl2759|Eukaryota
EggNOG OGsCOG0141@1|root,COG0553@1|root,KOG1001@2759|Eukaryota,KOG1002@2759|Eukaryota
Evalue7.29e-45
Seed ortholog2880.D7G2K8
Hectar predicted targeting categorymitochondrion
TranscriptId349298
TrackFilteredModels1
ProteinId348976
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348976gene_6006Tribonema minus UTEX_B_3156 geneContig_33 909247..920483 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_6006_12exon_6006_12Tribonema minus UTEX_B_3156 exonContig_33 909247..909487 -
exon_6006_11exon_6006_11Tribonema minus UTEX_B_3156 exonContig_33 910437..910634 -
exon_6006_10exon_6006_10Tribonema minus UTEX_B_3156 exonContig_33 911146..911175 -
exon_6006_9exon_6006_9Tribonema minus UTEX_B_3156 exonContig_33 911236..911271 -
exon_6006_8exon_6006_8Tribonema minus UTEX_B_3156 exonContig_33 911396..911582 -
exon_6006_7exon_6006_7Tribonema minus UTEX_B_3156 exonContig_33 911996..912755 -
exon_6006_6exon_6006_6Tribonema minus UTEX_B_3156 exonContig_33 915644..915695 -
exon_6006_5exon_6006_5Tribonema minus UTEX_B_3156 exonContig_33 916515..916601 -
exon_6006_4exon_6006_4Tribonema minus UTEX_B_3156 exonContig_33 917452..917616 -
exon_6006_3exon_6006_3Tribonema minus UTEX_B_3156 exonContig_33 918305..918353 -
exon_6006_2exon_6006_2Tribonema minus UTEX_B_3156 exonContig_33 919244..919443 -
exon_6006_1exon_6006_1Tribonema minus UTEX_B_3156 exonContig_33 920388..920483 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_6006UTR3_6006Tribonema minus UTEX_B_3156 three_prime_UTRContig_33 909247..909376 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_6006CDS_6006Tribonema minus UTEX_B_3156 CDSContig_33 920388..920483 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348976Trimin1|348976|estExt_Genemark1.C_Ctg_330120Tribonema minus UTEX_B_3156 polypeptideContig_33 909377..920483 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_6006 ID=mRNA_6006|Name=jgi.p|Trimin1|348976|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2101bp|location=Sequence derived from alignment at Contig_33:909247..920483- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGTGTGGGCAGCGCTCCGCGTGATGGCCACGGTGACGCCCAAGTCACG
AATGCTGGGGCTCAGCATGCCGCTGCACGCTAGCGACACGGGCAATGTGA
TGACGGAGCAGGAGGCGGCGGCGGCGGCGGAGAGCTACGTGGCCGGCCAC
CTTCACGGCAGCGCGCTCGTGCGCATCGGCACCAACGACGCCGACGCCGA
GGCGCAGCTGGCCTCCGTCAGCGGCGACACGGCGACGCTGACCGCGGACT
GGCCGGGGAGCGCTGTCACCAAGGTGCACTTGACCGTCATGCACATAGAC
ATGGCGACGTTGACCGTGCACTGGCCGGGGAGCGCTGACACCAAGGGTGC
CATTTGGAAGCACGCAGTGGCATCGCGCAAGCAGCCCTACATCGAGCTCC
TGCTGGCATCCGAGAGGGAGAAGAGGGTGACAGGGGGAGGGGGATCAAGT
TCCGGCGGCATTCACACTGCGGGGTTCCAAACAGTCTACAAGGCCATGGC
GGGAGATGAGGTGCACTGCCCCATCTGCCTGGGGTCCGTGGTGCGGCCAT
GCGTTACCATGTGCGTCCACGTCTACTGCCGCGAGTGCATCGGCGCGGAG
CTGGACATCCGCCTACATCAGCCTACACATGTGCCCAAGTGCCCTCTGTG
CCGCAGGGACGTGAACCCTGGCGACGTGTGCGAGCTGCAGCTCGACACCA
CCGAGGAGGACCCCGACGCGCAGCAGCACGACAGCGCTCAGCAGCACAAC
AGGGCCCGGGAGGATGACGACCACGCGCCGAGCGCTGCCGCCAAGCCCTA
CAAAGGCAAGGGCAAGGGCAAGGCCAGAGCGTCCCCCGGCGGCGGCGCTG
CTGCGAACGGCACGCCCAAGGGCAAAGGCAAGGGGAAGGGGAGAGCGTCC
CCTAAGCCCGCGAGCTCTTTGCGCCAGTCCCGCCGCGCCGCCGCCGATGG
AAAGCGGCGCGGCAACAGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCA
GTGCAGGCGGCGGCGGCGGCAGCAGCGGTGGCGGTGGCGGCGGCGGCAGC
AGCGGCGGCGGCAGCGCCAACGGCGGCGCCGCCATCGGCACCGGCAGCTC
GGTGACCCTGCCAGACCTGTCGCGCGCGTGGCGCGCCCCCCTGGGGGACA
CGGACCTCCAGGCGATACCCCCGCCCCCCGGGGCCCCCCTGCACCTGCGC
GACCCGAGCGCCCCCTCGCTGGACCCCCTGTTCCTGGCGCACTGGCGCGC
GGCGTCTGCGGCGGGCGCCGTGGGCGCGAAGCTGCGCGCGCTGATCGGCG
ACATGCGCGCGGTGCTGCGGCGCGAGCCGGCCGCCAAGTTTGTGGTGTTC
AGCGCCGCCGCGGAGGCGCTGGCGAAGGCGGCGGAGGAGCTCAACAGGGC
AACGCTCAAGTGTGTGACCATCTCCGGCGCAGTCTCCGTGGCGCGGCGCG
GCGCTGCAGTGACGGAGTTCAACACCGACCCCAGCGTGCGCGTCGTGCTG
CTGGCCATGGGGAGCGCTGCTGCAGGGCTCACGCTCACCGCCGCCAGCAC
TGTGTACATGCTGGAGCCGGCGTTCAACGCCGCCGACGAGGCACAGCTGG
AGCCCACGTTCAACGCCGCCGACGAGGCGCAGCCCACGTTCAACGCCGCC
GACGAGGCGCAGGCTCTGAGCCGTGCGCACCGCATCGGCCAGACGCACAG
CGTTCGCTGCGTCATCTTCTACTGCGCGGGCACGCTCGAGGAGAGGCTGC
TGGCGCTGCGGCACGAGTCCGGCGGCCTCGCATCATTGCTCAGCGGCAGC
GGCGCGCTCACGGGCCTCGCAGAGGACAGCGCCGAAGTGTCGCACCTGCT
GTCACTCCCGAACCTGCAGCGACTGTTGGGGGTGACAGACTCTCAGCTCA
GAAGGCGAGCGGCAGGCAGCAACGATGATGGCAGCAGCGAGGATGAAGAG
TCAGCCGACGATGACTATTGAGTGGCAGCAGGGCTCAGCGAAATGGCTGC
ATCCGGGCCAATCACACCTTGTGAAACGAACGATGAGCATTGTTCAAACA
CAGTACAGTTGAAATAGACAGCACTTGCACTAGTGCAACGCTCTGCACTC
A
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protein sequence of jgi.p|Trimin1|348976

>Trimin1|348976|estExt_Genemark1.C_Ctg_330120 ID=Trimin1|348976|estExt_Genemark1.C_Ctg_330120|Name=jgi.p|Trimin1|348976|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=657bp
MVWAALRVMATVTPKSRMLGLSMPLHASDTGNVMTEQEAAAAAESYVAGH
LHGSALVRIGTNDADAEAQLASVSGDTATLTADWPGSAVTKVHLTVMHID
MATLTVHWPGSADTKGAIWKHAVASRKQPYIELLLASEREKRVTGGGGSS
SGGIHTAGFQTVYKAMAGDEVHCPICLGSVVRPCVTMCVHVYCRECIGAE
LDIRLHQPTHVPKCPLCRRDVNPGDVCELQLDTTEEDPDAQQHDSAQQHN
RAREDDDHAPSAAAKPYKGKGKGKARASPGGGAAANGTPKGKGKGKGRAS
PKPASSLRQSRRAAADGKRRGNSGGGGGGGGGGSAGGGGGSSGGGGGGGS
SGGGSANGGAAIGTGSSVTLPDLSRAWRAPLGDTDLQAIPPPPGAPLHLR
DPSAPSLDPLFLAHWRAASAAGAVGAKLRALIGDMRAVLRREPAAKFVVF
SAAAEALAKAAEELNRATLKCVTISGAVSVARRGAAVTEFNTDPSVRVVL
LAMGSAAAGLTLTAASTVYMLEPAFNAADEAQLEPTFNAADEAQPTFNAA
DEAQALSRAHRIGQTHSVRCVIFYCAGTLEERLLALRHESGGLASLLSGS
GALTGLAEDSAEVSHLLSLPNLQRLLGVTDSQLRRRAAGSNDDGSSEDEE
SADDDY*
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mRNA from alignment at Contig_33:909247..920483-

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_6006 ID=mRNA_6006|Name=jgi.p|Trimin1|348976|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=11237bp|location=Sequence derived from alignment at Contig_33:909247..920483- (Tribonema minus UTEX_B_3156 )
ATGGTGTGGGCAGCGCTCCGCGTGATGGCCACGGTGACGCCCAAGTCACG
AATGCTGGGGCTCAGCATGCCGCTGCACGCTAGCGACACGGGCAATGTGA
GCACCATTGCTCAGCGATGCTAGCAAGTTAGCGAGCCCCAAGAGCGGCGT
GGGTGTGACGTAGTTCTTCCAGAAGTATTGTAGTTCATGTGAGTGTTGAA
TGCTGAAGTAGACATGTACACTTCAACGTGTATCAATACAGCGCGGCTGC
TGGGGTTCAGCATGCTGCTCCACGCGAGCGACTCTGGCAATGTGAGCACC
ATCGCTCAGCAAAGTCGCCATGTCTAGCGACTGTCGTTGTGTGTATGTGC
GGAAGCAATACAAAACATGCCTGCATGCGAGTTGCGTCTGCAAGGCGGTA
CTGGCGCAACACAAACGGTGGGAGAGGTATGTGCACCACTTGAAGTTGAA
GATTACGCAGCGTGAGGTCGTTGCCCGTGAGCCTTGCACACACTTTCATA
GTCAAATCACTGAGTTCATAGGCGTGGGTGCACTATCAAATCACGAAGCA
GCGCAGCCGCTTAATGTACGTATGATATATGCGCATGCCTGCCTGGTCAG
AAAGTTGCATGATGCAGCGCGCACTTGAACTTTTACAGTTGTCAGCGCTG
CCGTCCTGTTGCGCATGTCAGTCCCATCCCATTTGCTTTGCAGCGCTGTC
TGATGTCTCAAATAGGGTTAGGGTTAACCCTAACGCTGGTCACCACTGAC
AGGTTACTGAACTCATGCGCACATGACACCCAACCGCGCACAGAGGTGTA
CTTCAAGTACAATGTAGTTGATGAACGCTACCTTGAAGTCGCCAGCCAAT
GACGGAGCCAAAAGACGCGGCCGCGGCTGAGAGCTGTAGGTCTGCGCCCC
CCTGATACTGACCTGCCCTACTTACCTACTGAGTGGGCACAGCAAAGTCG
CAATGGACGAGCGCTCAGCAACCTTCACCTGCATCATACTGTACAACACC
TAGAAGTCTACTCAGAATGCAACCGGTGACGCCTCAACAGGTGATGACGG
AGCAGGAGGCGGCGGCGGCGGCGGAGAGCTACGTGGCCGGCCACCTTCAC
GGCAGCGCGCTCGTGCGCATCGGCACCAACGACGCCGACGCCGAGGCGCA
GCTGGCCTCCGTCAGCGGCGACACGGCGACGCTGACCGCGGACTGGCCGG
GGAGCGCTGTCACCAAGGTGCACTTGACCGTCATGCACATGTATGTGTGT
TGCGTACGCGCATGTATGTTTATGGTATATGTACACTTCAAATGTATGGA
AACAAATCTTTTGAACCGTCATGCACATGTATGTGTGTTGTGTATGCGCA
TGTATGTTTATGGTACATGTACACTTCAAATGTATGGAAACAAATCAAGA
GATCGTAGAGCTGTAGGCGACAAGGTGTGGTTAGCCGCAAGTGCCTTTCA
CCAATAAGCGTGGTCGCCGCTGCTGCGGTGATATATATATATATATATAT
ATATAATCTTTTGTATTTTGGCAGAACCTGAAGAGGTTTTTGTGTGTCAA
TCCAGGCCTCTATGTGGCTTTGTGATCGGCGAATCGGCGTGTATATATGC
GTACATGCATAAATGAATGCTTACCTAGACTCCAGCGGCGACACGGCAAC
TTTGACGGCGGACTGGCCGGGGAGCGCTGTCACCAAAGTGCTTTTAACTT
AACTGTTGTGCACATACATGTATGTGTGTATGTATCTGTGTGTGTGTGTA
TATATATACAGCTGGAGCTGGCCTACCGAACACGTGAGACCTCTTTATTC
TGAACACCCATGCCTCGAGCGCTAAAGAGCTTCACACATAAGTCTTTCTG
CCTAGTGTGGATATGACGGCACTGTTTGACTCGTGGCCAATGACTGCAGC
AGCGTCGACCACGGTTATTGGTGGAAGGCACTTGCGGCTAACCACCTTGT
CACCTAGAACTTACGGCGGTAAATTCGTTTCCATATATATGTTTATTGAT
AAATATATCGTACTTCGGCAGTACCTGCAGAGGTTTAAGTGTCAATCCAG
CTCTCATGTGGCTTCGTGTTAGGTGGTGTGGCGTGTATACATTTGTACAT
GCTTATGAGTGCTTACCCAGACTCCAGCAGAGACATGGCGACGTTGACCG
TGCACTGGCCGGGGAGCGCTGACACCAAGGTGCGCTGGGGACCGCTTTGC
ATGCCCTATGCACTGGGGTGCATGAGTAACTGCCCAGTCACTGCCCGCGC
CGCGATCCGCAACGCTATCGTTGCCGCAAGCATCTGTACACTAATCTACG
TACACAATATACGCCTCCAGCATGGAATCGACCATGGTTTTCTTTTCCCG
CACCACCACGCTCCACTGCTGGGCGATGTCATACATACATACATACATAC
ATACATTCAGCTGCACGGCAGTGCTCGGCAGCAGGCACGAACACACCGTG
CTGAGCATTGCTGACGTGCTCGCCTCCGTCAGCGGTAACATGGCGCAGGA
ATTGGGATCGCTGTAATGGGGTATGTATCCTCTCGCTCTCATAGTTTTAT
ACATACCTGCAAGCTGACTGAGCGACGCTGCGGTCTACGTGCGCCTGCTA
ACGCGCAGCCCGCCTCTGTCTGTGCTTGTGTGACCGTGCGTGTGCACAAC
CCCGCCTCTGTCTGTGCTTGTGTGACCGTGCGTGTGCACAACCCTGATGC
GTAAATAGCCTGCACTGGTCTGCGTCCAAGGGGCTCACCATTTTGCCATT
AGCGTGGCGGCAGAGCACTTTTGAAATGTACTTGGACGTATATGCTTTTC
CCAGCAGACTGTCCTCATGCTAATAGTGAAATATTGAACGCCTGGTAATG
TGCTTCTGGCCACGCAGGGTGCCATTTGGAAGCACGCAGTGGCATCGCGC
AAGCAGCCCTACATCGAGCTCCTGCTGGCATCCGAGAGGGAGAAGAGGGT
GACAGGGGGAGGGGGATCAAGTTCCGGCGGCATTCACACTGCGGGGTTCC
AAACAGTCTACAAGGCCATGGCGGGAGATGAGGTGCGTTGGTTACTCACC
TTTTTGTCACTTCAAGTGTGTTTTGTAAATACTGCAAGCATGTATACTCT
GAAGTATGCGCTTATCTGGAGCCCAAGCCAGTCGAGCAGGCACGCTGCGC
CACCGGCAGCATTCATATAGCCGGCTTTCATGGCGGGCGATGAGGTATGT
TGGTATCCTTTCCATTGCGCGTTTGAGGTACTCCATACACTGCACGCCAT
GAAACCTGAAGCACATGAGCGTGGCTGTGGCATGCCAATCGGATTGGTCA
GGCATGCTGTACGCACGAACTGCACGGTCAAAGGGGCTCTGAGGCAGTGC
TGGTGCCGCTCGGGGCACTCTCATGCCAGTGTAAGTCCTGGCGCACGCGC
TTCACATGTAAACATGCGCGCGAAAATGAGGCGGGCGCCGCAGAGCGTGT
GAGCACGGTGTATTGGCACTGCCAACGATGTTCACGGCAGCGTTGCACAA
CTGCGAGCCACATGACTGTTCCAACACGTTGAAAATGTTTACAAGTCTTC
GAAACAGCTCCCCGCCCCCTACAAGCTGATCACTGGCACTCGCCACGTGG
CGTAGCCTGCGTCGCGGTGGTTATGCTTGTCAGCAAACGCCATCGCGACA
CGGGGCGGCAAACGCCTTAGGGTTAGGCCCAAGGTCAGGGTTAGGCTAGG
GTTAGCTAATGTGACCGCAGGGCGTGCTCGCCCTGCACGGCTCGAGGGCC
TGTTGCAGACATGCGGGGAGCTACATGCGATTGAAGTCGTTCGATACTGT
ATGTATGTGCAGCATGGGTCTGCAAGAGTCCTACAGCCCCCCTCCCCCCC
CCCCCTCCCCCCCTCCCCCTCTGCCTCTTCAGGTGCACTGCCCCATCTGC
CTGGGGTCCGTGGTGCGGCCATGCGTTACCATGTGCGTCCACGTCTACTG
CCGCGAGTGCATCGGCGCGGTGAGTCACTCAATACCTTTACATCACCACC
CTACTGGCAGATGTGCATGGCGCTGAACAGATGGCGAACATCTGTGCCGT
GTTGGATGTACAGCAGAAACATTGGCGCTTCCATTGGTTGCTGAACGCAA
TCATTCATGCATAGACATGCGACCACTTTCAAGCAGAACGTGGGGTGTCA
CCTTTTGCGCTTAAGTGTCGAGTGCGCTTGCGGTCTTGTTGCATCACTGG
TGCAGCGCACTATGCCTTCACACTGTCCATGTAGCCAGCTCACCCCCGCT
CACGCTAGCACTGTAGCCAGATCACAAGTTCGTCTTATAAAAAACAGACA
AGAGTGGCTCTCGATTTCGCAGCAAAGGGCACCAGCTGCTGCCGCGTGCT
GCTGTTCTAATGTCGTGGTATGCAACATTTGTGATTTTTCTGTTCTCGCA
AACGGCTCGCCAAGAGTGTCTGCGATTCAGACCCTGTCTTGCAGCTGTGC
GTGGTAGCAATTGCAGGTGCTGCTCAAGTTGAAGTACATGACTGTTCTCT
GACAGCTGGTAAGAAAATAAGAAGAAGCTCATGCCCTCAGGCACCTTGTG
CATTGCAGCACTTGATGCCTTGCCCATGCTTTACGCCCACAACATTAAAC
AAGGCACGCACTTGAAATACTTGAAGTACATATCCTGAAGTGCTGCATCA
CAATGTATGCAGCTTTGTAGCTGCTTCTTCGTCAGCGCTTGTTCTCCTTG
AAAGCATAAAGCACACATAAATGTACTGACTCTGTCTTGAATATTGAAAG
GGAGCACTGTTGTTGTTGCTGCGCTGGTTGTGGTGCAGGAGCTGGACATC
CGCCTACATCAGCCTACACATGTGCCCAAGTGCCCTCTGTGTAAGTCAAC
TGAGAAGCCTCTGCTCCTCACTGTAATGCATTCTTCAACGGCTCGGTGCG
CCTTTGAAAATGGGCGTTAAGCGATTCGCACGACCACAGACACCTGCACG
AAGGATGTTTGCCCCAACGCAGGCGGAACAATGAATGGAATAAAATCTAC
AGGACTTGTGTGGTTCAGAAATACCAGACATGGAGGTGTGCGCTCACAAC
GTGCGGGAAGATGAGCCATTGGTTCTTCAGTGTTTTCAAGAATTTTATTA
CAAGTGCCCCCGTTCAGGGCCGTCTGGGCCCGTCTGGGGGACCCTTCGAA
CGCCCGGAACATTGTTACTAGCGTACTTGGAGGTGTGCATGAAGTAGGGG
TTGGAAAGCGAGTATTGACATGAAGTTGGATCCAAATAACCTAACTATGC
ATAAAGTGCTGGTCAAATAGTGGCCAAGGCTTGAACCATGGTCCTGACAG
TACTTGCAAAGTTCAAGTGGAGAGGCTGCTGAATTTGGTCTCATCATTAG
CCCTTGTGATGGTCGTACGCATGCTGTGATGGCGGAGTGACTCGAACGGG
AAGTGGGTAAGCGGATGAACGAATGGCCACTTGAAGTTGGAGAACTGCAT
CGGGATTGCTGACCGAATATGATCTCTGTTCACTTCAACGTCGAGGACAA
CCCGGTTGACCGCTCTTTTTAAGTGTCCACATTTTGTCAACGCTTGACTG
TCAGGATTAGGGGTAAAGTGAAGTTATCCTAACCCTAACTCTAAACCTGA
CTCATATAGTGGCAGAGGAGCTACACGAGTTGTCAATCTGCAATGTGCTC
AATATATACTGGCACTCGAAGTAAACCATTTGCACACAAGGTGCACCTTC
AGGTGTTGCAATTATTTGTTGACGAAGCGTGGACACTTAGAAAGAGCAGT
CAACTGGAATGCCCCCTCAGCGTTGAAGCAGACCGATGTCAGCTTCCCGG
CCGCAGCTGGAGCATGGAGCCTGATGCAGTCCTGGAGCTTCAAGTGTCCG
TTCGTCCATCCGCTTACTCACTTCCCGTTTGAAATACTCCACCATCACAG
CATGTGTATTACCAGCGCAATTGCTGTCAACAACGATTGATTTCTCCAAC
TTCTGAACTTGAACTTTTGTCTTGAGAAGGGCTTGAAGTCCATGTCCGGC
GGCACTCCATAGGCCAACTGCCTAGCCCTGATCTGCAGTGACATAGACGA
TGCACGAATGACGTCACATTGAAGCACGGGAAGGCGGCGTTGCGTTGCTA
TGAGGAGGAGGCAGCACGGCTCAACCGTGCGTCACGAGACGCAGTCATCA
CACGCCAGCGCATGTCATCGCCACGACTCATATTGTGCAGTTGGGACGAG
ACACGTAAATGAGTTTGAGTACTGTACGAGTATGGGGGTGACACGTGTGT
ATGAAGTATGAGTACTCGTCCTGTACATATACGGCCTCATGTTCAAGTAC
TCGCAGTGTACGAGTACTTGTGTGCAAGTATTTCTACAAGGATGATCAAT
GAGCAATGCCTTGTCGCGTTCCAACTGTGCAACATTCCCTCAACAACTGC
CATCGTTTTTTGCCATGAGAAAGAAACATTGAAACCGCGAAGATGCGAGA
CATAGGTTTCACAGTGGGTGCATATACCACCACGACAAACACGATGCACA
TCTGGCAAATCACTTGAGCATGGTTGCTGGCGCAATAATGTCAGCGAATT
GAAACGCACAGTCACCTGTCGAGTAGCAGGCTTATCCACTCACCTTCAGA
GGGCTGCGCATCTGACAGTCAGCTGCGTCCCCTGAACAATGTCGTGTAGC
GGCGGCACTTGCGGAGAAAAAAACAAAAAAAAAAACCATTTCATTAATAG
CTGCAGCCAAAACCGCCATGGCCAACGTCGATGACTTCGCCTTTGCACTG
GCCATGCTCGTACATCATGGAGCTCCTGTGAGATCACCACATCAAGGTTT
GATCACTGGTCAAATGCTGAACTTTGCCCTTGGCAGGTGCATTGATTATG
GTGATATGCAAAAAACATACTTTGAAGTGCTTGCAAATCATTGTGCAGGA
AGTGCCTCTGTCCTGCACAACGCGACAGTAAACAGATAGGACCCACAAGC
ACTGTATGAGGTCAATTGCATGGCGAGGGGGGGAGTGCGGTTTCCCAACC
TTAACCCTACCGCGAACCCCAAGGGCGCGGTGTTCACCTCGCCGACATGC
ACAAGTGTATTAACCTGATCCCACCACGCTTCAGCTTTCATGTAGCTCCC
GTGGGCTTGAAACAATTTCTCTTCGCGGCGCTTGCGTTGTTCAAAGAGGT
AGCAGCAGCATCATTGAAGGTGGCCATCCTGCTTCGGGAAAGTGCCATTA
GCGAAAGTTGATGAAAGCAGGCATTAGGCAATCGTGAGCCGTCCACGTCG
TGCTGCGCAGCGTGGGAATCAGCAAGTGTGGCTGCCAAACAACAGGCATC
CCCCACACTCACTCTAGCCCCAATCCTAACCTACCCTTAGTTCGTACAGT
GCACCAGTGCGAGACGCACTTCACACGTACCTGATATTGCAGTAAACAGT
CGTGCTCGAGTTAGTGGTGATGTTGCCGCTGTGTGAGTGATAACTGAACT
TGTCTCACGGTGCCTGCGCTGGTACGTTGCCTTTCACGGTTTCATTTCCA
GGAACGGACTGAATCTTGCAGCAATGCACTGCGATTGCTGGTGGCTCACG
CCATGTTGTGCACATGCGTCGTCAGCACTTATTGGCCGGAGTGACTGACT
CGCCATTACGACTTTCAGCGTCTATCCGTTGTAGCCCTAACCCAAACCCC
AAACCATTTTTTTCAAGTGCAAAACTACTCGACCTGGCCTTACCTCTCAT
CCGCTGCCTGCATATTCCCCCCCTGCAGGCCGCAGGGACGTGAACCCTGG
CGACGTGTGCGAGCTGCAGCTCGACACCACCGAGGAGGACCCCGACGCGC
AGCAGCACGACAGCGCTCAGCAGCACAACAGGGCCCGGGAGGATGACGAC
CACGCGCCGAGCGCTGCCGCCAAGCCCTACAAAGGCAAGGGCAAGGGCAA
GGCCAGAGCGTCCCCCGGCGGCGGCGCTGCTGCGAACGGCACGCCCAAGG
GCAAAGGCAAGGGGAAGGGGAGAGCGTCCCCTAAGCCCGCGAGCTCTTTG
CGCCAGTCCCGCCGCGCCGCCGCCGATGGAAAGCGGCGCGGCAACAGCGG
CGGCGGCGGCGGCGGCGGCGGCGGCGGCAGTGCAGGCGGCGGCGGCGGCA
GCAGCGGTGGCGGTGGCGGCGGCGGCAGCAGCGGCGGCGGCAGCGCCAAC
GGCGGCGCCGCCATCGGCACCGGCAGCTCGGTGACCCTGCCAGACCTGTC
GCGCGCGTGGCGCGCCCCCCTGGGGGACACGGACCTCCAGGCGATACCCC
CGCCCCCCGGGGCCCCCCTGCACCTGCGCGACCCGAGCGCCCCCTCGCTG
GACCCCCTGTTCCTGGCGCACTGGCGCGCGGCGTCTGCGGCGGGCGCCGT
GGGCGCGAAGCTGCGCGCGCTGATCGGCGACATGCGCGCGGTGCTGCGGC
GCGAGCCGGCCGCCAAGTTTGTGGTGTTCAGCGCCGCCGCGGAGGCGCTG
GCGAAGGCGGCGGAGGAGCTCAACAGGGCAACGCTCAAGTGAGTGGGTAG
TGCCAGTGTGTGGGCTGCGGTGCTGCCGCGTGCGGTGGTGCTGGGATTGA
CTTGCGCTGGTCGTGTGCAGAGAATGTGCATGGTTATGGCGTATGTGAAA
TCAGTGTGGAGCAGTGGCAACATAAACAGCACCTTGTATGCAGCGGGTCA
TGACTGCGCACCCCCGTGAACAATTGTTTAAACTACCTGCAGGAAGGGAC
CCTAGCACCGTCACAGATATGAGCCGCACAATCATGTGCCTCCTGCATCT
TGTGTACAAATGCGAAGACTAGTCAGTCCAGCTTACTATAGTATGTTCAA
CAAGGTCACGGTGCGACAGGCAGTGTGCAGCAGCGTCACCGTTCCGCGCA
CTCACAGGCGGCCCTAACCCTAAACCTAACCCCTTGCCGTCCTCGCAACA
GGTGTGTGACCATCTCCGGCGCAGTCTCCGTGGCGCGGCGCGGCGCTGCA
GTGACGGAGTTCAACACCGACCCCAGCGTGCGCGTCGTGCTGCTGGCCAT
GGGGAGCGCTGCTGCAGGGCTCACGCTCACCGCCGCCAGCACTGTGTACA
TGCTGGAGCCGGCGTTCAACGCCGCCGACGAGGCACAGGTAAAGACGCAT
AGCGTATGTGCATACGCATACTCTGATTTATATGTATATATGCTGGAGCC
CGCGTTTCATGAGAAGCGCCGCTGCGGGGCTCAAAGTCACCGCCGCCAGC
ACAGTCTACAAGCTGGAGCCCACGTTCAACGCCGCCGACGAGGCGCAGGT
AAAGACGCATAGCGTATGGACATACGCATACTGTGATTTATATGTATATA
TGCTGGAGCCCACGTTCAACGCCGCCGACGAGGCGCAGGTATTCCCTCTA
ACATGATTATGAGAAGCGTACTGATTCCATCGACATGATCATGAGAAGCG
TATTGATTGTATGCTGAAGCGTAAGTGATGTGATTTGAACTCACATTCTC
ACGGCACAACAGATGGCGTGAGCATACCGCTTTGAAGGACTTGTCTGGAC
GTGTTTGTTTTGTCACGTGTGGCGTCATTGAAGGCGAGCCAGTTGGCGCG
ATTTGCCATGTGCAGTGGCTCAAATGAGCATCGTCTACTAAGCGCTTATA
AGCAAGGCCATTCGAGCAAATGGCGGTGTGAACCTGCCTCTATACACAAT
CAAGGTCAAGCTCGGCTGGGTGCTGCAGTCTGCAGAGCGTCGCACATCAT
CATTGCCAACAAAGCCACTTGAATGAACCATTTGAATGTGCAACTACCAT
TCCTTGAAGTACTAGTAGAGCTGAGAGTTGCTGTCTGTGCAGTGGTTGCT
GATTTGTACCCCCCCTCCCCACCCCCCACCCCCTGCATTCTCCCCCCAGG
CTCTGAGCCGTGCGCACCGCATCGGCCAGACGCACAGCGTTCGCTGCGTC
ATCTTCTACTGCGCGGGCACGCTCGAGGAGAGGCTGCTGGCGCTGCGGCA
CGAGTCCGGCGGCCTCGCATCATTGCTCAGCGGCAGCGGCGCGCTCACGG
GCCTCGCAGAGGACAGCGCCGAAGTGTCGCACCTGCTGTCACTCCCGGTA
TGTGTATAACCTACATATGTGTGGACTTGTGTGATATGGGGTGGTGCGCA
CATACAGTAGGTAGCACGTGATTCAGCGAAATACAGTCTGCTGTTTGTAG
CTGCAGTATTTGTCCTCCTGCAGATTTTGATCGCACGGGTCAACTTGAAG
TTTCCACATGTATGCCAGTGTTGCCATTACAGCTTGGCGCCGGTGGGGCA
CCGTGACGGCAATGCTTGTTGAAGTGCACCTGCTCGCATCGCTGGTTTGT
ACTTCAGCAGTTGATGCATGCTTCAAAGAACTCTCAAAGTGCTTTGAACT
ACATCAGCCGTGCCGTAGGGGGCGCAATGAACCCCAGATGATCAGTTGAA
TGTGGTGACGCATATTGCACGCAAGCGTTGCAGACTTGCAATAGTTCACC
TCCGGTGTGCTCGCATTTTGATGACTGCTCAGCAGCACAAGCGCCAGCTG
CAGGCAAAGGGCATTGCGCCAGTCGTTGTCGCTGCTGCCGTCATGGTTCA
GTTGAGGTGTCACCGCAGGGTCAGTCAGGAGGTCTGGATGGTGGTGGTGA
AATGTGTGTCAGCGCTCAGTGCTCATGGTGCGCTTGCGGCGTCACCTTTG
ACAGCGCAAAACTGTCACATTGAGCCCATGTAGCATGTGAGGTTCCTTAT
AGAAGTAGTTGAAGAAGAAGTGGTTGACGATATCGCAGCGCAACATGATG
ATTGCTGATCACGTAAAGCTGGCTCAATGGCACCAGCAGTGCACAATTGA
CTATACCGCCTTTCTTACACGACATCAAGTGTCTGACACAAGGAACATGC
AGCGCTGACTCATAGACGTGAACTGGCAACTGTGTGCTGGTGTGGCGTGC
TTTCATGTTTCCTGAGCACAATCAGGGTTAGGGTGAGGGTTAGCAATCTC
CCACTGTGACTCACACGCCCCATCGTCTGCACTGCTTATTCTCCAGAACC
TGCAGCGACTGTTGGGGGTGACAGACTCTCAGCTCAGAAGGCGAGCGGCA
GGCAGCAACGATGATGGCAGCAGCGAGGATGAAGAGTCAGCCGACGATGA
CTATTGAGTGGCAGCAGGGCTCAGCGAAATGGCTGCATCCGGGCCAATCA
CACCTTGTGAAACGAACGATGAGCATTGTTCAAACACAGTACAGTTGAAA
TAGACAGCACTTGCACTAGTGCAACGCTCTGCACTCA
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Coding sequence (CDS) from alignment at Contig_33:909247..920483-

>mRNA_6006 ID=mRNA_6006|Name=jgi.p|Trimin1|348976|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1971bp|location=Sequence derived from alignment at Contig_33:909247..920483- (Tribonema minus UTEX_B_3156 )
ATGGTGTGGGCAGCGCTCCGCGTGATGGCCACGGTGACGCCCAAGTCACG
AATGCTGGGGCTCAGCATGCCGCTGCACGCTAGCGACACGGGCAATGTGA
TGACGGAGCAGGAGGCGGCGGCGGCGGCGGAGAGCTACGTGGCCGGCCAC
CTTCACGGCAGCGCGCTCGTGCGCATCGGCACCAACGACGCCGACGCCGA
GGCGCAGCTGGCCTCCGTCAGCGGCGACACGGCGACGCTGACCGCGGACT
GGCCGGGGAGCGCTGTCACCAAGGTGCACTTGACCGTCATGCACATAGAC
ATGGCGACGTTGACCGTGCACTGGCCGGGGAGCGCTGACACCAAGGGTGC
CATTTGGAAGCACGCAGTGGCATCGCGCAAGCAGCCCTACATCGAGCTCC
TGCTGGCATCCGAGAGGGAGAAGAGGGTGACAGGGGGAGGGGGATCAAGT
TCCGGCGGCATTCACACTGCGGGGTTCCAAACAGTCTACAAGGCCATGGC
GGGAGATGAGGTGCACTGCCCCATCTGCCTGGGGTCCGTGGTGCGGCCAT
GCGTTACCATGTGCGTCCACGTCTACTGCCGCGAGTGCATCGGCGCGGAG
CTGGACATCCGCCTACATCAGCCTACACATGTGCCCAAGTGCCCTCTGTG
CCGCAGGGACGTGAACCCTGGCGACGTGTGCGAGCTGCAGCTCGACACCA
CCGAGGAGGACCCCGACGCGCAGCAGCACGACAGCGCTCAGCAGCACAAC
AGGGCCCGGGAGGATGACGACCACGCGCCGAGCGCTGCCGCCAAGCCCTA
CAAAGGCAAGGGCAAGGGCAAGGCCAGAGCGTCCCCCGGCGGCGGCGCTG
CTGCGAACGGCACGCCCAAGGGCAAAGGCAAGGGGAAGGGGAGAGCGTCC
CCTAAGCCCGCGAGCTCTTTGCGCCAGTCCCGCCGCGCCGCCGCCGATGG
AAAGCGGCGCGGCAACAGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCA
GTGCAGGCGGCGGCGGCGGCAGCAGCGGTGGCGGTGGCGGCGGCGGCAGC
AGCGGCGGCGGCAGCGCCAACGGCGGCGCCGCCATCGGCACCGGCAGCTC
GGTGACCCTGCCAGACCTGTCGCGCGCGTGGCGCGCCCCCCTGGGGGACA
CGGACCTCCAGGCGATACCCCCGCCCCCCGGGGCCCCCCTGCACCTGCGC
GACCCGAGCGCCCCCTCGCTGGACCCCCTGTTCCTGGCGCACTGGCGCGC
GGCGTCTGCGGCGGGCGCCGTGGGCGCGAAGCTGCGCGCGCTGATCGGCG
ACATGCGCGCGGTGCTGCGGCGCGAGCCGGCCGCCAAGTTTGTGGTGTTC
AGCGCCGCCGCGGAGGCGCTGGCGAAGGCGGCGGAGGAGCTCAACAGGGC
AACGCTCAAGTGTGTGACCATCTCCGGCGCAGTCTCCGTGGCGCGGCGCG
GCGCTGCAGTGACGGAGTTCAACACCGACCCCAGCGTGCGCGTCGTGCTG
CTGGCCATGGGGAGCGCTGCTGCAGGGCTCACGCTCACCGCCGCCAGCAC
TGTGTACATGCTGGAGCCGGCGTTCAACGCCGCCGACGAGGCACAGCTGG
AGCCCACGTTCAACGCCGCCGACGAGGCGCAGCCCACGTTCAACGCCGCC
GACGAGGCGCAGGCTCTGAGCCGTGCGCACCGCATCGGCCAGACGCACAG
CGTTCGCTGCGTCATCTTCTACTGCGCGGGCACGCTCGAGGAGAGGCTGC
TGGCGCTGCGGCACGAGTCCGGCGGCCTCGCATCATTGCTCAGCGGCAGC
GGCGCGCTCACGGGCCTCGCAGAGGACAGCGCCGAAGTGTCGCACCTGCT
GTCACTCCCGAACCTGCAGCGACTGTTGGGGGTGACAGACTCTCAGCTCA
GAAGGCGAGCGGCAGGCAGCAACGATGATGGCAGCAGCGAGGATGAAGAG
TCAGCCGACGATGACTATTGA
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