mRNA_93 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|154711
Unique NamemRNA_93
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
[Close]
BLAST of jgi.p|Trimin1|154711 vs. uniprot
Match: A0A836CMT6_9STRA (Histone H4 (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMT6_9STRA)

HSP 1 Score: 192 bits (489), Expect = 4.350e-62
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 1 
Query:    1 MTGRGRGGKGLGKGGAKRHRKVLRDNIQGITKAAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVLALKRQGRVLYGFG 306
            MTGRGRGGKGLGKGGAKRHRKVLRDNIQGITKAAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVLALKRQGRVLYGFG
Sbjct:    1 MTGRGRGGKGLGKGGAKRHRKVLRDNIQGITKAAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVLALKRQGRVLYGFG 102
[Close]
BLAST of jgi.p|Trimin1|154711 vs. uniprot
Match: F0W2L9_9STRA (Histone H4 n=3 Tax=Stramenopiles TaxID=33634 RepID=F0W2L9_9STRA)

HSP 1 Score: 186 bits (472), Expect = 1.760e-59
Identity = 98/102 (96.08%), Postives = 99/102 (97.06%), Query Frame = 1 
Query:    1 MTGRGRGGKGLGKGGAKRHRKVLRDNIQGITKAAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVLALKRQGRVLYGFG 306
            MTGRG+GGKGLGKGGAKRHRKVLRDNIQGITK AIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVV ALKRQGR LYGFG
Sbjct:    1 MTGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG 102
[Close]
BLAST of jgi.p|Trimin1|154711 vs. uniprot
Match: V9LJF7_CALMI (Histone H4 n=6 Tax=Bilateria TaxID=33213 RepID=V9LJF7_CALMI)

HSP 1 Score: 185 bits (469), Expect = 5.050e-59
Identity = 97/102 (95.10%), Postives = 99/102 (97.06%), Query Frame = 1 
Query:    1 MTGRGRGGKGLGKGGAKRHRKVLRDNIQGITKAAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVLALKRQGRVLYGFG 306
            MTGRG+GGKGLGKGGAKRHRKVLRDNIQGITK AIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHA+RKTVTAMDVV ALKRQGR LYGFG
Sbjct:    1 MTGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFG 102
[Close]
BLAST of jgi.p|Trimin1|154711 vs. uniprot
Match: A0A835ZF66_9STRA (Histone H4 n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF66_9STRA)

HSP 1 Score: 185 bits (469), Expect = 5.050e-59
Identity = 97/102 (95.10%), Postives = 99/102 (97.06%), Query Frame = 1 
Query:    1 MTGRGRGGKGLGKGGAKRHRKVLRDNIQGITKAAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVLALKRQGRVLYGFG 306
            MTGRG+GGKGLGKGGAKRHRKVLRDNIQGITK AIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVT+MDVV ALKRQGR LYGFG
Sbjct:    1 MTGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTSMDVVYALKRQGRTLYGFG 102
[Close]
BLAST of jgi.p|Trimin1|154711 vs. uniprot
Match: A0A024G0M5_9STRA (Histone H4 n=40 Tax=Stramenopiles TaxID=33634 RepID=A0A024G0M5_9STRA)

HSP 1 Score: 184 bits (468), Expect = 7.180e-59
Identity = 97/102 (95.10%), Postives = 99/102 (97.06%), Query Frame = 1 
Query:    1 MTGRGRGGKGLGKGGAKRHRKVLRDNIQGITKAAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVLALKRQGRVLYGFG 306
            M+GRG+GGKGLGKGGAKRHRKVLRDNIQGITK AIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVV ALKRQGR LYGFG
Sbjct:    1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG 102
[Close]
BLAST of jgi.p|Trimin1|154711 vs. uniprot
Match: H4_SOLLC (Histone H4 n=13 Tax=cellular organisms TaxID=131567 RepID=H4_SOLLC)

HSP 1 Score: 184 bits (467), Expect = 1.020e-58
Identity = 96/102 (94.12%), Postives = 99/102 (97.06%), Query Frame = 1 
Query:    1 MTGRGRGGKGLGKGGAKRHRKVLRDNIQGITKAAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVLALKRQGRVLYGFG 306
            M+GRG+GGKGLGKGGAKRHRKVLRDNIQGITK AIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDSVTYTEHARRKTVTAMDVV ALKRQGR LYGFG
Sbjct:    1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG 102
[Close]
BLAST of jgi.p|Trimin1|154711 vs. uniprot
Match: A0A3L6V663_9STRA (Histone H4 n=2 Tax=Stramenopiles TaxID=33634 RepID=A0A3L6V663_9STRA)

HSP 1 Score: 184 bits (468), Expect = 1.450e-58
Identity = 97/102 (95.10%), Postives = 99/102 (97.06%), Query Frame = 1 
Query:    1 MTGRGRGGKGLGKGGAKRHRKVLRDNIQGITKAAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVLALKRQGRVLYGFG 306
            M+GRG+GGKGLGKGGAKRHRKVLRDNIQGITK AIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVV ALKRQGR LYGFG
Sbjct:   23 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG 124
[Close]
BLAST of jgi.p|Trimin1|154711 vs. uniprot
Match: H4_DROME (Histone H4 n=192 Tax=cellular organisms TaxID=131567 RepID=H4_DROME)

HSP 1 Score: 184 bits (466), Expect = 1.450e-58
Identity = 96/102 (94.12%), Postives = 99/102 (97.06%), Query Frame = 1 
Query:    1 MTGRGRGGKGLGKGGAKRHRKVLRDNIQGITKAAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVLALKRQGRVLYGFG 306
            MTGRG+GGKGLGKGGAKRHRKVLRDNIQGITK AIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRD+VTYTEHA+RKTVTAMDVV ALKRQGR LYGFG
Sbjct:    1 MTGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFG 102
[Close]
BLAST of jgi.p|Trimin1|154711 vs. uniprot
Match: A0A1D1W2Z4_RAMVA (Histone H4 n=4 Tax=Panarthropoda TaxID=88770 RepID=A0A1D1W2Z4_RAMVA)

HSP 1 Score: 184 bits (466), Expect = 1.450e-58
Identity = 96/102 (94.12%), Postives = 99/102 (97.06%), Query Frame = 1 
Query:    1 MTGRGRGGKGLGKGGAKRHRKVLRDNIQGITKAAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVLALKRQGRVLYGFG 306
            MTGRG+GGKGLGKGGAKRHRKVLRDNIQGITK AIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRD+VTYTEHA+RKTVTAMDVV ALKRQGR LYGFG
Sbjct:    1 MTGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFG 102
[Close]
BLAST of jgi.p|Trimin1|154711 vs. uniprot
Match: A0A182QIK7_9DIPT (Histone H4 n=1 Tax=Anopheles farauti TaxID=69004 RepID=A0A182QIK7_9DIPT)

HSP 1 Score: 184 bits (466), Expect = 1.450e-58
Identity = 96/102 (94.12%), Postives = 99/102 (97.06%), Query Frame = 1 
Query:    1 MTGRGRGGKGLGKGGAKRHRKVLRDNIQGITKAAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVLALKRQGRVLYGFG 306
            MTGRG+GGKGLGKGGAKRHRKVLRDNIQGITK AIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRD+VTYTEHA+RKTVTAMDVV ALKRQGR LYGFG
Sbjct:    1 MTGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFG 102
[Close]
BLAST of jgi.p|Trimin1|154711 vs. uniprot
Match: A0A835Z2G3_9STRA (HSF_DOMAIN domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2G3_9STRA)

HSP 1 Score: 219 bits (559), Expect = 1.130e-72
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 1 
Query:    1 FVCKLIEMLDAPEEGSVVWAPGGQGFRVLDEDALERRALPRFFKDVSHPPRARHRYASFRRQLNLYGFIKQRKGALAGCYTHPCFRAGDAQLLALITRRKSSSEP 315
            FVCKLIEMLDAPEEGSVVWAPGGQGFRVLDEDALERRALPRFFKDVSHPPRARHRYASFRRQLNLYGFIKQRKGALAGCYTHPCFRAGDAQLLALITRRKSSSEP
Sbjct:    1 FVCKLIEMLDAPEEGSVVWAPGGQGFRVLDEDALERRALPRFFKDVSHPPRARHRYASFRRQLNLYGFIKQRKGALAGCYTHPCFRAGDAQLLALITRRKSSSEP 105
[Close]
BLAST of jgi.p|Trimin1|154711 vs. uniprot
Match: A0A6V1QFS1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QFS1_HETAK)

HSP 1 Score: 73.9 bits (180), Expect = 3.160e-13
Identity = 41/105 (39.05%), Postives = 56/105 (53.33%), Query Frame = 1 
Query:    1 FVCKLIEMLDAPEEGSVVWAPGGQGFRVLDEDALERRALPRFFKDVSHPPRARHRYASFRRQLNLYGFIKQRKGALAGCYTHPCFRAGDAQLLALITRRKSSSEP 315
            F  KL E+L+      + W   G  F V D D   +  L ++F+          ++ASF+RQLNLYGF K  +G+ AG Y H  FR G   LL+L+ R +SSS P
Sbjct:   15 FARKLYEILEVEPGDLLSWNAAGNAFFVRDIDRFSKEILMKYFRHS--------KFASFQRQLNLYGFRKITRGSDAGSYAHQYFRKGKPDLLSLVRRSQSSSSP 111
[Close]
BLAST of jgi.p|Trimin1|154711 vs. uniprot
Match: B8BYI5_THAPS (HSF_DOMAIN domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BYI5_THAPS)

HSP 1 Score: 68.9 bits (167), Expect = 8.450e-12
Identity = 37/106 (34.91%), Postives = 56/106 (52.83%), Query Frame = 1 
Query:    1 FVCKLIEMLDAPEEGS------VVWAPGGQGFRVLDEDALERRALPRFFKDVSHPPRARHRYASFRRQLNLYGFIKQRKGALAGCYTHPCFRAGDAQLLALITRRK 300
            F  KL +ML+   EG       V WA  G GF++ +        LP++FK          +++SF+R LNLYGF+K R+G     Y++  F  GD  +L+ +T+RK
Sbjct:   28 FPRKLYDMLEIESEGQSESTCCVHWAASGSGFKIANVAKFSEVVLPKYFKTS--------KFSSFQRNLNLYGFVKNRRGPEVDVYSNAKFNRGDLDMLSHLTKRK 125
[Close]
BLAST of jgi.p|Trimin1|154711 vs. uniprot
Match: A0A286UVW5_9AGAM (Transcription factor hsf1 n=1 Tax=Pyrrhoderma noxium TaxID=2282107 RepID=A0A286UVW5_9AGAM)

HSP 1 Score: 69.3 bits (168), Expect = 1.510e-11
Identity = 45/115 (39.13%), Postives = 61/115 (53.04%), Query Frame = 1 
Query:    1 FVCKLIEML-DAPEEGSVVWAPGGQGFRVLDEDALERRALPRFFKDVSHPPRARHRYASFRRQLNLYGFIK---QRKGALAGC-------YTHPCFRAGDAQLLALITRRKSSSE 312
            F+ KL EM+ DA  +  + W+ GG  F VLD + +    LPR+FK  +        +ASF RQLN+YGF K    ++G L          + HP FR G   LL LI R+K +SE
Sbjct:   31 FLQKLYEMVCDAQTDNLIRWSDGGDSFFVLDHERVAHDVLPRWFKHSN--------FASFVRQLNMYGFHKIPHLQQGVLKSDTETEIWNFEHPNFRRGQPDLLCLINRKKQASE 137
[Close]
BLAST of jgi.p|Trimin1|154711 vs. uniprot
Match: UPI0004E9F0C3 (Heat shock factor protein 2 n=1 Tax=Passalora fulva TaxID=5499 RepID=UPI0004E9F0C3)

HSP 1 Score: 68.9 bits (167), Expect = 2.070e-11
Identity = 47/118 (39.83%), Postives = 55/118 (46.61%), Query Frame = 1 
Query:    1 FVCKLIEMLDAPEEGSVVWAPGGQGFRVLDEDALERRALPRFFKDVSHPPRARHRYASFRRQLNLYGFIKQ--------------RKGALA-GCYTHPCFRAGDAQLLALITRRKSSS 309
            FV KL   LD   E  + W+  G+ F VLDED   RR +P  FK         + YASF RQLN+YGF K               RKGA     Y+HP FR     LL LI +  S S
Sbjct:  149 FVQKLSSFLDKEHESLIRWSDDGRAFIVLDEDEFARRLIPELFKH--------NNYASFVRQLNMYGFHKTVNIHDGSLRQSEQARKGAKPPSMYSHPYFRRNRPDLLWLIQKPASKS 258
[Close]
BLAST of jgi.p|Trimin1|154711 vs. uniprot
Match: A0A7R9UD31_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UD31_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 2.750e-11
Identity = 38/104 (36.54%), Postives = 56/104 (53.85%), Query Frame = 1 
Query:    1 FVCKLIEMLDAPEEGSVVWAPGGQGFRVLDEDALERRALPRFFKDVSHPPRARHRYASFRRQLNLYGFIKQRKGALAGCYTHPCFRAGDAQLLALITR--RKSS 306
            F  KL+ ++D  ++  + WA  G  F ++++   E   LPR+F           ++ASF+RQLNLYGF +  +G   G Y HP F  G A LL  + R  RK+S
Sbjct:   13 FPAKLMHIIDHEDDNIIRWAENGACFVIVNQKRFEMETLPRYFHHG--------KFASFQRQLNLYGFRRISRGPSEGFYFHPSFHCGRADLLQGVKRLPRKTS 108
[Close]
BLAST of jgi.p|Trimin1|154711 vs. uniprot
Match: A0A7R9YBQ9_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBQ9_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 3.630e-11
Identity = 36/98 (36.73%), Postives = 51/98 (52.04%), Query Frame = 1 
Query:    1 FVCKLIEMLDAPEEGSVVWAPGGQGFRVLDEDALERRALPRFFKDVSHPPRARHRYASFRRQLNLYGFIKQRKGALAGCYTHPCFRAGDAQLLALITR 294
            F  KL E+L+  +   + W   G+ F + D D   R +L R+FK         H++ SF+RQLNLYGF K  KG   G Y HP F+    + L+ + R
Sbjct:   60 FPRKLFELLEKEDSAVIRWDEEGECFVIQDMDTFTRESLERYFKH--------HKFTSFQRQLNLYGFRKIAKGERCGYYVHPHFQRDHPEWLSKVRR 149
[Close]
BLAST of jgi.p|Trimin1|154711 vs. uniprot
Match: M2WMC3_DOTSN (HSF_DOMAIN domain-containing protein n=1 Tax=Dothistroma septosporum (strain NZE10 / CBS 128990) TaxID=675120 RepID=M2WMC3_DOTSN)

HSP 1 Score: 68.2 bits (165), Expect = 3.860e-11
Identity = 47/118 (39.83%), Postives = 55/118 (46.61%), Query Frame = 1 
Query:    1 FVCKLIEMLDAPEEGSVVWAPGGQGFRVLDEDALERRALPRFFKDVSHPPRARHRYASFRRQLNLYGFIKQ--------------RKGALA-GCYTHPCFRAGDAQLLALITRRKSSS 309
            FV KL   LD   E  + W+  G+ F VLDED   RR +P  FK         + YASF RQLN+YGF K               RKGA     Y+HP FR     LL LI +  S S
Sbjct:  148 FVQKLSSFLDKEHEELIRWSDDGRAFIVLDEDEFARRLIPELFKH--------NNYASFVRQLNMYGFHKTVNIHDGSLRQSEQARKGAKPPSMYSHPYFRRNRPDLLWLIQKPASKS 257
[Close]
BLAST of jgi.p|Trimin1|154711 vs. uniprot
Match: A0A7S4D949_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D949_HETAK)

HSP 1 Score: 67.4 bits (163), Expect = 6.510e-11
Identity = 42/106 (39.62%), Postives = 52/106 (49.06%), Query Frame = 1 
Query:    1 FVCKLIEMLDAPEEGSVV-WAPGGQGFRVLDEDALERRALPRFFKDVSHPPRARHRYASFRRQLNLYGFIKQRKGALAGCYTHPCFRAGDAQLLALITRRKSSSEP 315
            F  KL E+L+  E  S   W   G  F V   D      LP++FK          ++ASF+RQLNLYGF K  KG  +G Y H  F  G  QLL  + R  SS+ P
Sbjct:    5 FARKLFEILEDEEYRSYTFWNADGNAFFVRQVDEFLNEILPKYFKQS--------KFASFQRQLNLYGFRKVTKGPDSGAYAHRYFLRGQEQLLHKVRRHTSSTGP 102
[Close]
BLAST of jgi.p|Trimin1|154711 vs. uniprot
Match: A0A225AL46_9EURO (HSF_DOMAIN domain-containing protein n=1 Tax=Talaromyces atroroseus TaxID=1441469 RepID=A0A225AL46_9EURO)

HSP 1 Score: 67.0 bits (162), Expect = 9.860e-11
Identity = 44/116 (37.93%), Postives = 56/116 (48.28%), Query Frame = 1 
Query:    1 FVCKLIEMLDAPEEGSVV-WAPGGQGFRVLDEDALERRALPRFFKDVSHPPRARHRYASFRRQLNLYGFIK------------QRKGALAGCYTHPCFRAGDAQLLALITRRKSSS 309
            FV KL   LD P+    + W+  G  F VLDED   RR +P  FK         ++YASF RQLN+YGF K            +RK      Y +P F+ G   LL LI + K+ S
Sbjct:  147 FVQKLRSFLDEPQYADFIRWSDDGNSFIVLDEDEFARRLIPELFKH--------NKYASFVRQLNMYGFHKKVGLSDNSMRASERKNKSPSEYANPYFKRGHPDLLWLIQKPKNVS 254
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|154711 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CMT6_9STRA4.350e-62100.00Histone H4 (Fragment) n=1 Tax=Tribonema minus TaxI... [more]
F0W2L9_9STRA1.760e-5996.08Histone H4 n=3 Tax=Stramenopiles TaxID=33634 RepID... [more]
V9LJF7_CALMI5.050e-5995.10Histone H4 n=6 Tax=Bilateria TaxID=33213 RepID=V9L... [more]
A0A835ZF66_9STRA5.050e-5995.10Histone H4 n=2 Tax=Tribonema minus TaxID=303371 Re... [more]
A0A024G0M5_9STRA7.180e-5995.10Histone H4 n=40 Tax=Stramenopiles TaxID=33634 RepI... [more]
H4_SOLLC1.020e-5894.12Histone H4 n=13 Tax=cellular organisms TaxID=13156... [more]
A0A3L6V663_9STRA1.450e-5895.10Histone H4 n=2 Tax=Stramenopiles TaxID=33634 RepID... [more]
H4_DROME1.450e-5894.12Histone H4 n=192 Tax=cellular organisms TaxID=1315... [more]
A0A1D1W2Z4_RAMVA1.450e-5894.12Histone H4 n=4 Tax=Panarthropoda TaxID=88770 RepID... [more]
A0A182QIK7_9DIPT1.450e-5894.12Histone H4 n=1 Tax=Anopheles farauti TaxID=69004 R... [more]

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BLAST of jgi.p|Trimin1|154711 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z2G3_9STRA1.130e-72100.00HSF_DOMAIN domain-containing protein (Fragment) n=... [more]
A0A6V1QFS1_HETAK3.160e-1339.05Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
B8BYI5_THAPS8.450e-1234.91HSF_DOMAIN domain-containing protein n=1 Tax=Thala... [more]
A0A286UVW5_9AGAM1.510e-1139.13Transcription factor hsf1 n=1 Tax=Pyrrhoderma noxi... [more]
UPI0004E9F0C32.070e-1139.83Heat shock factor protein 2 n=1 Tax=Passalora fulv... [more]
A0A7R9UD31_9STRA2.750e-1136.54Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7R9YBQ9_9STRA3.630e-1136.73Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
M2WMC3_DOTSN3.860e-1139.83HSF_DOMAIN domain-containing protein n=1 Tax=Dothi... [more]
A0A7S4D949_HETAK6.510e-1139.62Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A225AL46_9EURO9.860e-1137.93HSF_DOMAIN domain-containing protein n=1 Tax=Talar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_3contigContig_3:472417..472722 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|154711|gw1.3.519.1
BRITEko00000,ko00001,ko03036
KEGG Pathwayko05034,ko05203,ko05322,map05034,map05203,map05322
KEGG koko:K11254
GOsGO:0000228,GO:0000785,GO:0000786,GO:0000788,GO:0000790,GO:0001101,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005730,GO:0005737,GO:0005773,GO:0005774,GO:0005829,GO:0005886,GO:0005911,GO:0006323,GO:0006325,GO:0006333,GO:0006334,GO:0006950,GO:0006996,GO:0008150,GO:0009414,GO:0009415,GO:0009506,GO:0009507,GO:0009536,GO:0009579,GO:0009628,GO:0009987,GO:0010035,GO:0016020,GO:0016043,GO:0022607,GO:0030054,GO:0031090,GO:0031497,GO:0031974,GO:0031981,GO:0032991,GO:0032993,GO:0034622,GO:0034728,GO:0042221,GO:0042393,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043933,GO:0044085,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044437,GO:0044444,GO:0044446,GO:0044454,GO:0044464,GO:0044815,GO:0050896,GO:0051276,GO:0055044,GO:0065003,GO:0065004,GO:0070013,GO:0071103,GO:0071824,GO:0071840,GO:0071944,GO:0097159,GO:0098588,GO:0098805,GO:1901363,GO:1901700
Descriptionprotein heterodimerization activity
COG categoryB
Max annot lvl2759|Eukaryota
EggNOG OGsCOG2036@1|root,KOG3467@2759|Eukaryota
Evalue2.89e-60
Seed ortholog653948.CCA15305
Hectar predicted targeting categoryother localisation
TranscriptId155033
TrackFilteredModels1
ProteinId154711
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|154711gene_93Tribonema minus UTEX_B_3156 geneContig_3 472417..472722 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_93_1exon_93_1Tribonema minus UTEX_B_3156 exonContig_3 472417..472722 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_93CDS_93Tribonema minus UTEX_B_3156 CDSContig_3 472417..472722 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|154711Trimin1|154711|gw1.3.519.1Tribonema minus UTEX_B_3156 polypeptideContig_3 472417..472722 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_93 ID=mRNA_93|Name=jgi.p|Trimin1|154711|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=306bp|location=Sequence derived from alignment at Contig_3:472417..472722+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGACGGGTCGTGGCCGCGGTGGAAAGGGCCTCGGGAAAGGCGGCGCAAA
GCGTCACCGTAAAGTGCTGCGCGATAACATTCAAGGTATTACAAAGGCAG
CGATTCGCCGCCTGGCGCGTCGCGGCGGGGTCAAGCGCATTTCGGGGCTC
ATTTATGAGGAGACTCGTGGTGTGCTCAAAGTTTTTCTGGAGAACGTCAT
TCGTGATAGTGTGACCTACACGGAGCACGCTCGCAGAAAGACAGTGACTG
CAATGGATGTGGTGCTGGCGTTGAAGCGTCAGGGCAGGGTGCTGTACGGC
TTTGGG
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protein sequence of jgi.p|Trimin1|154711

>Trimin1|154711|gw1.3.519.1 ID=Trimin1|154711|gw1.3.519.1|Name=jgi.p|Trimin1|154711|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=102bp
MTGRGRGGKGLGKGGAKRHRKVLRDNIQGITKAAIRRLARRGGVKRISGL
IYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVLALKRQGRVLYG
FG
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mRNA from alignment at Contig_3:472417..472722+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_93 ID=mRNA_93|Name=jgi.p|Trimin1|154711|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=306bp|location=Sequence derived from alignment at Contig_3:472417..472722+ (Tribonema minus UTEX_B_3156 )
ATGACGGGTCGTGGCCGCGGTGGAAAGGGCCTCGGGAAAGGCGGCGCAAA
GCGTCACCGTAAAGTGCTGCGCGATAACATTCAAGGTATTACAAAGGCAG
CGATTCGCCGCCTGGCGCGTCGCGGCGGGGTCAAGCGCATTTCGGGGCTC
ATTTATGAGGAGACTCGTGGTGTGCTCAAAGTTTTTCTGGAGAACGTCAT
TCGTGATAGTGTGACCTACACGGAGCACGCTCGCAGAAAGACAGTGACTG
CAATGGATGTGGTGCTGGCGTTGAAGCGTCAGGGCAGGGTGCTGTACGGC
TTTGGG
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Coding sequence (CDS) from alignment at Contig_3:472417..472722+

>mRNA_93 ID=mRNA_93|Name=jgi.p|Trimin1|154711|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=306bp|location=Sequence derived from alignment at Contig_3:472417..472722+ (Tribonema minus UTEX_B_3156 )
ATGACGGGTCGTGGCCGCGGTGGAAAGGGCCTCGGGAAAGGCGGCGCAAA
GCGTCACCGTAAAGTGCTGCGCGATAACATTCAAGGTATTACAAAGGCAG
CGATTCGCCGCCTGGCGCGTCGCGGCGGGGTCAAGCGCATTTCGGGGCTC
ATTTATGAGGAGACTCGTGGTGTGCTCAAAGTTTTTCTGGAGAACGTCAT
TCGTGATAGTGTGACCTACACGGAGCACGCTCGCAGAAAGACAGTGACTG
CAATGGATGTGGTGCTGGCGTTGAAGCGTCAGGGCAGGGTGCTGTACGGC
TTTGGG
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