mRNA_18921 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|152516 vs. uniprot
Match: A0A835YYW0_9STRA (P-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYW0_9STRA) HSP 1 Score: 501 bits (1289), Expect = 5.490e-179 Identity = 257/257 (100.00%), Postives = 257/257 (100.00%), Query Frame = 1
Query: 1 GKEDVGTTPLFIIIGAQKAGTTNLRHNLLSHPSLAGSRTETHFFDWHFPAAGEGGDADDATTAIAEGGGAAAALRAYSRRLLQGRAGLVRAASDVRRVARGRAFVFDTSPSYYLIPAAAARAAALRPRARLVLLVRDPVERYFSAAHMVTCWNATVGLPTEAFHATGGAAARAAEFAAAYNASDADGCMGLPLRGGRCQWGAFTGNALARGLYADALRRWLRAFPARNVLVVDSARYFRATQAVLDEVLAFLGLPPH 771
GKEDVGTTPLFIIIGAQKAGTTNLRHNLLSHPSLAGSRTETHFFDWHFPAAGEGGDADDATTAIAEGGGAAAALRAYSRRLLQGRAGLVRAASDVRRVARGRAFVFDTSPSYYLIPAAAARAAALRPRARLVLLVRDPVERYFSAAHMVTCWNATVGLPTEAFHATGGAAARAAEFAAAYNASDADGCMGLPLRGGRCQWGAFTGNALARGLYADALRRWLRAFPARNVLVVDSARYFRATQAVLDEVLAFLGLPPH
Sbjct: 1 GKEDVGTTPLFIIIGAQKAGTTNLRHNLLSHPSLAGSRTETHFFDWHFPAAGEGGDADDATTAIAEGGGAAAALRAYSRRLLQGRAGLVRAASDVRRVARGRAFVFDTSPSYYLIPAAAARAAALRPRARLVLLVRDPVERYFSAAHMVTCWNATVGLPTEAFHATGGAAARAAEFAAAYNASDADGCMGLPLRGGRCQWGAFTGNALARGLYADALRRWLRAFPARNVLVVDSARYFRATQAVLDEVLAFLGLPPH 257
BLAST of jgi.p|Trimin1|152516 vs. uniprot
Match: A0A6H5JDR2_9PHAE (Sulfotransfer_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDR2_9PHAE) HSP 1 Score: 122 bits (307), Expect = 2.050e-28 Identity = 100/278 (35.97%), Postives = 127/278 (45.68%), Query Frame = 1
Query: 1 GKEDVGTTPLFIIIGAQ---KAGTTNLRHNLLSHPSLAGSRT-ETHFFDWHF----PAAGEGGDADDATTAIAEGGGAAAALRAYSRRLLQGRAGLVRAASDVRRVARGRAFVFDTSPSYYLIPAAAARAAALRPRARLVLLVRDPVERYFSAAHMVTCWNATVGL-------PTEAFHATGGAAARAAEFAAAYNASDADG---CMGLPLRGG---RCQWGAFTGNALARGLYADALRRWLRAFPARNVLVVDSARYFRATQAVLDEVLAFLGLPPH 771
G E + PL IIIG Q K GT NLR +LL+HPSL+G R E HFFDW + P + D A A L AY+ R ++ A D R+ R +++P Y+ P A R + P ARLVL++RDP ERYFS M+ CW FH G R E+ AS C G R RC T + L RGLYAD L RW R +P +LV++S+ F LD+V +GLPPH
Sbjct: 208 GPEASRSIPLAIIIGTQASAKGGTQNLRSHLLTHPSLSGLRQKEAHFFDWFWFTSDPKSRHEWRGDGRGGAGLNSSAAGEVLSAYADRAME--------AVDPRK--RDTMATVESTPLYFFYPLAPYRMKMVLPAARLVLILRDPTERYFSHLRMMMCWTRDSETFDHLEKRQKTYFHIPG----RVKEYLERGEASYKPYTPLCRGEEARAKDLLRCWKAMVTHDPLHRGLYADQLERWFRVYPRSQILVLESSEMFGNFTGTLDKVARHIGLPPH 471
BLAST of jgi.p|Trimin1|152516 vs. uniprot
Match: D7FST9_ECTSI (Sulfotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FST9_ECTSI) HSP 1 Score: 120 bits (300), Expect = 2.250e-27 Identity = 100/280 (35.71%), Postives = 127/280 (45.36%), Query Frame = 1
Query: 1 GKEDVGTTPLFIIIGAQKAGTTNLRHNLLSHPSLAGSRT-ETHFFDW------------HFPAAGEGGDADDATTAIAEGGGAAAALRAYSRRLLQGRAGLVRAASDVRRVARGRAFVFDTSPSYYLIPAAAARAAALRPRARLVLLVRDPVERYFSAAHMVTCWNA---TVGLPTEA----FHATGGAAARAAEFAAAYNASDADGCMGLPLRGG---RCQWGAFTGNALARGLYADALRRWLRAFPARNVLVVDSARYFRATQAVLDEVLAFLGLPPH 771
G E + PL IIIG QK GT NLR +LL+HPSL+G R E HFFDW +P G GG + + A L AY+ R ++ A D + R ++SP Y P A R + P ARLVL++RDP ERYFS M+ C T E FH G + A+Y C G R RC T + L RGLY D L RWLR +P +LVV+S+ F L++V +GLPPH
Sbjct: 266 GPEASRSIPLAIIIGTQKGGTQNLRSHLLTHPSLSGLRQKEAHFFDWFWFPSDPNKKRHEWPGDGRGGAGLNPSAA-------GEVLSAYADRAMK--------AVDPSK--RDTMATVESSPLYLFFPLAPYRMRMVLPAARLVLILRDPTERYFSHLRMMMCGTRDGETFDQLEERLETYFHIPGRVKEYLEQGEASYKPYTPL-CRGEGARAKDLLRCWKAMVTHDPLHRGLYVDQLERWLRVYPRSQILVVESSEMFGDFTGTLNQVARHIGLPPH 527
BLAST of jgi.p|Trimin1|152516 vs. uniprot
Match: D7G9G8_ECTSI (Putative deacetylase sulfotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9G8_ECTSI) HSP 1 Score: 115 bits (289), Expect = 2.770e-26 Identity = 93/275 (33.82%), Postives = 125/275 (45.45%), Query Frame = 1
Query: 1 GKEDVGTTPLFIIIGAQKAGTTNLRHNLLSHPSLAGSRTETHFFDWH---FPAAG----EGGDADDATTAIAEGGGAAAALRAYSRRLLQGRAGLVRAASDVRRVARGRAFVFDTSPSYYLIPAAAARAAALRPRARLVLLVRDPVERYFSAAHMVTC-------WNATVGLPTEAFHATGGAAARAAEFAAAYNASDADGCMGLPLRGGRCQWGAF----TGNALARGLYADALRRWLRAFPARNVLVVDSARYFRATQAVLDEVLAFLGLPPH 771
G+ + + PL IIG QK GTTNLR NLL+HP + G E HFFD +P G +G + + + AI L Y++ L+ + A A + ++SP Y L P A R + PRA+LV+++RDP +RYFS MV C + + + FH G A AAYN + C G W F T N L RGLYAD L RW R + +LV+DSA F + V + GLP H
Sbjct: 125 GERSLLSIPLITIIGVQKGGTTNLRRNLLTHPLVTGMPNEVHFFDQDPDIYPKLGHWQGDGREKELSPGAIGR------ILSEYAKTCLEEGKPKKKPAWHKNVAAMSSGVIVESSPRYILSPIAPYRMRMVLPRAKLVVVLRDPTDRYFSQLRMVMCKTEPDPGYMSLEEQISTHFHPPGQAKGYIKRAEAAYNPYG-ERCRGENATSADL-WNCFKAMATHNPLHRGLYADQLERWFRVYDKSQILVIDSAEMFVNFTETVAVVAEWAGLPEH 391
BLAST of jgi.p|Trimin1|152516 vs. uniprot
Match: A0A7D4BQY8_9BACL (Sulfotransferase domain-containing protein n=1 Tax=Kroppenstedtia pulmonis TaxID=1380685 RepID=A0A7D4BQY8_9BACL) HSP 1 Score: 87.8 bits (216), Expect = 4.710e-17 Identity = 74/257 (28.79%), Postives = 115/257 (44.75%), Query Frame = 1
Query: 19 TTPLFIIIGAQKAGTTNLRHNLLSHPSLA-GSRTETHFFDWHFPAAGEGGDADDATTAIAEGGGAAAALRAYSRRLLQGRAGLVRAASDVRRVARGRAFVFDTSPSYYLI-PAAAARAAALRPRARLVLLVRDPVERYFSAAH-MVTCWNATVGLPTEAFHATGGAA---ARAAEFAAAYNASDADGCMGLPLRGGRCQWGAFTGNALARGLYADALRRWLRAFPARNVLVVDSARYFRATQAVLDEVLAFLGLPPH 771
T P FII GAQK GTT+L L + ++ + E HFFD H+P L Y + + + + R F+ + YYL P AA RAA P+A++++L+R+PV+R FS H + T+ EA H R +YN+++ W + LARG+YAD L+RW+ FP+ ++V+ S +++ T +L ++ FLG+PPH
Sbjct: 2 TLPDFIIAGAQKCGTTSLYQYLTQNRNIVPAKKKEVHFFDIHYPRG----------------------LSWYKEKF------------PLNQRRKNRGFITGEASPYYLFHPHAAERAAQTLPQAKIIILLRNPVDRAFSHYHHQIRHGKETLSFE-EAVHQEESRLHMERRKMLRDKSYNSNN--------------YW---RYSYLARGVYADQLKRWMTHFPSHQIMVIRSEDFYKNTNKILKKLTHFLGIPPH 206
BLAST of jgi.p|Trimin1|152516 vs. uniprot
Match: A0A7V9HJB1_9CHLR (Sulfotransferase domain-containing protein n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7V9HJB1_9CHLR) HSP 1 Score: 87.8 bits (216), Expect = 5.960e-17 Identity = 78/256 (30.47%), Postives = 108/256 (42.19%), Query Frame = 1
Query: 1 GKEDVGTTPLFIIIGAQKAGTTNLRHNLLSHPSLAGS-RTETHFFDWHFPAAGEGGDADDATTAIAEGGGAAAALRAYSRRLLQGRAGLVRAASDVRRVARGRAFVFDTSPSYYLIPAAAARAAALRPRARLVLLVRDPVERYFSAAHMVTCWNATVGLPTEAFHATGGAAARAAEFAAAYNASDADGCMGLPLRGGRCQWGAFTGNALARGLYADALRRWLRAFPARNVLVVDSARYFRATQAVLDEVLAFLGLP 765
G D P FIIIGAQK GTT+L L P++ G+ + E H+FD +F G L + +R D V V ++ PSY P R L P A+L++L+R+PV+R +S M T R A + + A+ L L G + + LARG+Y D L+RWLR FP + +LV+ S +F +A LD LAFL LP
Sbjct: 19 GNMDTRQPPDFIIIGAQKGGTTSLYRYLTEQPAVGGATKKEVHYFDRNFDK------------------GLGWYLAHFPKR-------------DEFEV------VGESGPSYLFHPDVPGRVRELLPEAKLIVLLRNPVDRAYSQYQMRT---------------------RRQGEADTFEGAIAEELEHLRLAGDVARPQSGVHFQLARGIYVDQLKRWLRLFPRQQMLVLQSEPFFARPEAGLDRALAFLDLP 216
BLAST of jgi.p|Trimin1|152516 vs. uniprot
Match: A0A7W9II92_9ACTN (Sulfotransfer_1 domain-containing protein n=2 Tax=Streptosporangium becharense TaxID=1816182 RepID=A0A7W9II92_9ACTN) HSP 1 Score: 87.4 bits (215), Expect = 7.490e-17 Identity = 92/259 (35.52%), Postives = 115/259 (44.40%), Query Frame = 1
Query: 25 PLFIIIGAQKAGTTNLRHNLLSHPSLAGS--RTETHFFDWHFPAAGEGGDADDATTAIAEGGGAAAALRAYSRRLLQGRAGL-VRA-ASDVRRVARGRAFVFDTSPSYYLIPAAAARAAALRPRARLVLLVRDPVERYFSA-AHMV-------TCWNATVGLPTEAFHATGGAAARAAEFAAAYNASDADGCMGLPLRGGRCQWGAFTGNALARGLYADALRRWLRAFPARNVLVVDSARYFRATQAVLDEVLAFLGLP 765
P F+IIGAQ+ GTT+L L HP + R H+FD AY R + RA VRA AS + R F++SP Y P A R A P +LV+LVRDPVER FSA AH + +C+ VGL E A A + A+ Y+AS A + A+ LARG YA+ L R F +LVVDS R+F + V D VLAFLGLP
Sbjct: 3 PTFLIIGAQRCGTTSLYRVLARHPLVLKPVLRKGVHYFDM-----------------------------AYDRGMPWYRAHFPVRARASRLEHEYGCRVQAFESSPYYLFHPLAGPRIARDLPGVKLVVLVRDPVERAFSAHAHELARGFETESCFVRAVGLEEERL-----AGAAESLSASPYSASTAH------------RHHAY----LARGRYAEQLARLEPLFGRERILVVDSGRFFTEPETVYDRVLAFLGLP 211
BLAST of jgi.p|Trimin1|152516 vs. uniprot
Match: A0A8J3WFN1_PLARO (Sulfotransfer_1 domain-containing protein n=2 Tax=Planobispora TaxID=29298 RepID=A0A8J3WFN1_PLARO) HSP 1 Score: 87.0 bits (214), Expect = 1.490e-16 Identity = 92/253 (36.36%), Postives = 110/253 (43.48%), Query Frame = 1
Query: 25 PLFIIIGAQKAGTTNLRHNLLSHPSLAGS--RTETHFFDWHFPAAGEGGDADDATTAIAEGGGAAAALRAYSRRLLQGRAG--LVRAASDVRRVARGRAFVFDTSPSYYLIPAAAARAAALRPRARLVLLVRDPVERYFSA-AHMVTCWNATVGLPTEAFHATGGAAARAAEFAAAYNASDADGCMGLPLRGGRCQWGAFTGNA-LARGLYADALRRWLRAFPARNVLVVDSARYFRATQAVLDEVLAFLGLP 765
P F+IIGAQ++GTT+L L HP H+FD AY R L RA L AAS + R RA F++SP Y P A AR A P +L++LVRDPVER FSA AH + G TEA A RA E A AD P A +A LARG YA+ L R R +LV+DS +F + V D VLAFLGLP
Sbjct: 26 PAFLIIGAQRSGTTSLYRALTQHPLALKPVLHKGVHYFDM-----------------------------AYDRGLPWYRAHFPLRAAASRLARRYGYRAQAFESSPYYLFHPLAPARIAEDLPGVKLIVLVRDPVERAFSAHAHELAR-----GFETEASFA------RAVELEEQRLAGAADALTAAPHSASH----AHRHHAYLARGRYAEQLDRLERLVGRDRMLVLDSGCFFTRPEVVYDRVLAFLGLP 234
BLAST of jgi.p|Trimin1|152516 vs. uniprot
Match: UPI001AEC4620 (Sulfotransferase n=1 Tax=Microbispora oryzae TaxID=2806554 RepID=UPI001AEC4620) HSP 1 Score: 85.9 bits (211), Expect = 2.510e-16 Identity = 89/250 (35.60%), Postives = 103/250 (41.20%), Query Frame = 1
Query: 25 PLFIIIGAQKAGTTNLRHNLLSHPSLAGS--RTETHFFDWHFPAAGEGGDADDATTAIAEGGGAAAALRAYSRRLLQGRAGLVRAASDVRRVARGRAFVFDTSPSYYLIPAAAARAAALRPRARLVLLVRDPVERYFSA-AHMVTCWNATVGLPTEAFHATGGAAARAAEFAAAYNASDADGCMGLPLRGGRCQWGAFTGNALARGLYADALRRWLRAFPARNVLVVDSARYFRATQAVLDEVLAFLGLP 765
P F+I+GAQ+ GTT+L L HP +A R H+FD AY R L RA AA R RGR F+ SP Y P A AR A P RL+ LVRDPVER FSA AH + G TE RA E A + G P G LARG YA+ L R F VLV+DS +FR +A VL FLGLP
Sbjct: 3 PSFLIVGAQRCGTTSLYRALARHPLVAKPVLRKGVHYFDV-----------------------------AYGRGLPWYRAHFPMAA----RRERGRVLAFEASPYYLFHPLAPARIARDLPGVRLIALVRDPVERAFSAHAHELAR-----GFETEPSFE------RAVELEEQRLAGAEERLRGHP---GHVSHAHRHHGYLARGRYAEQLARLDPLFGRERVLVLDSGDFFRHPEAEYGRVLEFLGLP 205
BLAST of jgi.p|Trimin1|152516 vs. uniprot
Match: A0A8J3WTP0_9ACTN (Sulfotransfer_1 domain-containing protein n=2 Tax=Planobispora TaxID=29298 RepID=A0A8J3WTP0_9ACTN) HSP 1 Score: 85.9 bits (211), Expect = 4.040e-16 Identity = 91/254 (35.83%), Postives = 113/254 (44.49%), Query Frame = 1
Query: 25 PLFIIIGAQKAGTTNLRHNLLSHPSLAGS--RTETHFFDWHFPAAGEGGDADDATTAIAEGGGAAAALRAYSRRLLQGRAGLVRAASDVRRVARG---RAFVFDTSPSYYLIPAAAARAAALRPRARLVLLVRDPVERYFSA-AHMVTCWNATVGLPTEAFHATGGAAARAAEFAAAYNASDADGCMGLPLRGGRCQWGAFTGNA-LARGLYADALRRWLRAFPARNVLVVDSARYFRATQAVLDEVLAFLGLP 765
P F+I+GAQ++GTT+L L HP R H+FD AY R + RA AS V R++R R F+++P Y P AAAR A P +L++LVRDPVER FSA AH + G TE A RA E A G + R R + +A LARG YA+ L R R VLVVDS R+F +AV D VL FLGLP
Sbjct: 28 PSFLIVGAQRSGTTSLYRALAQHPLTLKPVLRKGVHYFDM-----------------------------AYHRGISWYRAHFPLTAS-VSRLSRRHGRRPLAFESAPYYLFHPLAAARIAEDLPGVKLIVLVRDPVERAFSAHAHELAR-----GFETEPSFA------RAVELEEERLA----GAVRELARSPRAASHSHRHHAYLARGRYAEQLSRVERLIGRDRVLVVDSGRFFSRPEAVYDRVLEFLGLP 236 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|152516 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_18921 ID=mRNA_18921|Name=jgi.p|Trimin1|152516|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=771bp|location=Sequence derived from alignment at Contig_295:24302..25072- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. GGCAAGGAGGACGTGGGCACGACGCCGCTGTTCATCATCATCGGCGCGCAback to top protein sequence of jgi.p|Trimin1|152516 >Trimin1|152516|gw1.295.5.1 ID=Trimin1|152516|gw1.295.5.1|Name=jgi.p|Trimin1|152516|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=257bp GKEDVGTTPLFIIIGAQKAGTTNLRHNLLSHPSLAGSRTETHFFDWHFPAback to top mRNA from alignment at Contig_295:24302..25072- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_18921 ID=mRNA_18921|Name=jgi.p|Trimin1|152516|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=771bp|location=Sequence derived from alignment at Contig_295:24302..25072- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_295:24302..25072- >mRNA_18921 ID=mRNA_18921|Name=jgi.p|Trimin1|152516|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=771bp|location=Sequence derived from alignment at Contig_295:24302..25072- (Tribonema minus UTEX_B_3156 )back to top |