mRNA_18671 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|354599
Unique Name	mRNA_18671
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|354599 vs. uniprot
Match: A0A835Z0N2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0N2_9STRA)

HSP 1 Score: 382 bits (981), Expect = 1.700e-133
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 3

Query:   12 MKQVASAASCKNINSRFCKSANTAAKTVLGVASSAFSDVRALYVGLTLALYGSAKTTSKQMTTADVAAAESEENEIEDVKARAGGSCAVHADTDLVHQFRVGLDERLVEGTIVAISFVHKHGGRDAYAVQIIGVEAQCLSGSLRLLVLRIKVGEWRAAAAATETSAGVQVAAELLAHAKQGQRVEASRAMMDEIQQTLGPSRGNAQAVDAV 644
            MKQVASAASCKNINSRFCKSANTAAKTVLGVASSAFSDVRALYVGLTLALYGSAKTTSKQMTTADVAAAESEENEIEDVKARAGGSCAVHADTDLVHQFRVGLDERLVEGTIVAISFVHKHGGRDAYAVQIIGVEAQCLSGSLRLLVLRIKVGEWRAAAAATETSAGVQVAAELLAHAKQGQRVEASRAMMDEIQQTLGPSRGNAQAVDAV
Sbjct:    1 MKQVASAASCKNINSRFCKSANTAAKTVLGVASSAFSDVRALYVGLTLALYGSAKTTSKQMTTADVAAAESEENEIEDVKARAGGSCAVHADTDLVHQFRVGLDERLVEGTIVAISFVHKHGGRDAYAVQIIGVEAQCLSGSLRLLVLRIKVGEWRAAAAATETSAGVQVAAELLAHAKQGQRVEASRAMMDEIQQTLGPSRGNAQAVDAV 211

[Close]

BLAST of jgi.p|Trimin1|354599 vs. uniprot
Match: A0A836CF72_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF72_9STRA)

HSP 1 Score: 154 bits (389), Expect = 4.460e-41
Identity = 88/93 (94.62%), Postives = 90/93 (96.77%), Query Frame = 3

Query:    3 LRSMKQVASAASCKNINSRFCKSANTAAKTVLGVASSAFSDVRALYVGLTLALYGSAKTTSKQMTTADVAAAESEENEIEDVKARAGGSCAVH 281
            LRSMKQVASAASCKNINSRFCKSANTAAKTVLGVASSAFSDVRALYVGLTLALYGSAKTTSKQMT ADVAAAESEE+EIEDV+A AGGSCA H
Sbjct:  360 LRSMKQVASAASCKNINSRFCKSANTAAKTVLGVASSAFSDVRALYVGLTLALYGSAKTTSKQMTVADVAAAESEESEIEDVEAPAGGSCASH 452

[Close]

BLAST of jgi.p|Trimin1|354599 vs. uniprot
Match: A0A835ZG17_9STRA (Uncharacterized protein n=3 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG17_9STRA)

HSP 1 Score: 146 bits (369), Expect = 1.700e-38
Identity = 94/138 (68.12%), Postives = 95/138 (68.84%), Query Frame = 3

Query:    3 LRSMKQVASAASCKNINSRFCKSANTAAKTVLGVASSAFSDVRALYVGLTLALYGSAKTTSKQMT------------------------------------------TADVAAAESEENEIEDVKARAGGSCAVHADT 290
            LRSMKQVASAASCKNINSRFCKSANTAAKTVLGVASSAFSDVRALYVGLTLALYGSAKTTSKQM+                                          TADV AAESEENEIEDVKARAGGSCAVHADT
Sbjct:  274 LRSMKQVASAASCKNINSRFCKSANTAAKTVLGVASSAFSDVRALYVGLTLALYGSAKTTSKQMSEWTRRCVPNSNLPFTAKFLAACNVAYADALPRTPAPLPVQPDTADVTAAESEENEIEDVKARAGGSCAVHADT 411

[Close]

BLAST of jgi.p|Trimin1|354599 vs. uniprot
Match: A0A835ZC61_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC61_9STRA)

HSP 1 Score: 135 bits (341), Expect = 2.050e-34
Identity = 89/140 (63.57%), Postives = 91/140 (65.00%), Query Frame = 3

Query:    3 LRSMKQVASAASCKNINSRFCKSANTAAKTVLGVASSAFSDVRALYVGLTLALYGSAKTTSKQMTT--------------------------------------------ADVAAAESEENEIEDVKARAGGSCAVHADT 290
            LRSMKQVASAASCKNINSRFCKSANTAAKTVLGVASSAFSDV ALYVGLTLALYGSAKTTSKQM+                                             +DVAA ESEENEIEDVKARAGGSCA HA T
Sbjct:  272 LRSMKQVASAASCKNINSRFCKSANTAAKTVLGVASSAFSDVSALYVGLTLALYGSAKTTSKQMSEWTRRCVPNSNLPSTAKFLAACNVAYTDALPQRPTPLPVQPATALSDVAAVESEENEIEDVKARAGGSCAAHAGT 411

[Close]

BLAST of jgi.p|Trimin1|354599 vs. uniprot
Match: A0A835Z0Q8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0Q8_9STRA)

HSP 1 Score: 132 bits (332), Expect = 4.010e-33
Identity = 87/135 (64.44%), Postives = 90/135 (66.67%), Query Frame = 3

Query:    3 LRSMKQVASAASCKNINSRFCKSANTAAKTVLGVASSAFSDVRALYVGLTLALYGSAKTTSKQMT------------------------------------------TADVAAAESEENEIEDVKARAGGSCAVH 281
            LRSMKQVASAASCKNINSRFCKSANTAAKTVLGVASSAFSDVRALYVGLTLALYGSAKTTSKQM+                                           ADVAAAESEE+EIEDV+A AGGSCA H
Sbjct:  272 LRSMKQVASAASCKNINSRFCKSANTAAKTVLGVASSAFSDVRALYVGLTLALYGSAKTTSKQMSEWTRRCVPNSNLPSTAKFLAACNVAYTDALPQRPTPLPVQPAVADVAAAESEESEIEDVEAPAGGSCASH 406

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BLAST of jgi.p|Trimin1|354599 vs. uniprot
Match: A0A836CES6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CES6_9STRA)

HSP 1 Score: 132 bits (333), Expect = 2.050e-32
Identity = 88/140 (62.86%), Postives = 90/140 (64.29%), Query Frame = 3

Query:    3 LRSMKQVASAASCKNINSRFCKSANTAAKTVLGVASSAFSDVRALYVGLTLALYGSAKTTSKQMTT--------------------------------------------ADVAAAESEENEIEDVKARAGGSCAVHADT 290
            LRSMKQVASAASCK INSRFCKSANTAAKTVLGVASSAFSDVRALYVGLTLALYGSAKTTSKQM+                                             +DVAA ESEENEIEDVKARAG SCA HA T
Sbjct:  272 LRSMKQVASAASCKYINSRFCKSANTAAKTVLGVASSAFSDVRALYVGLTLALYGSAKTTSKQMSEWTRRCVPNSNLPSTAKFLAACNVAYTDALPQRPTPLPVQPATAESDVAAVESEENEIEDVKARAGSSCAAHAGT 411

[Close]

BLAST of jgi.p|Trimin1|354599 vs. uniprot
Match: A0A835Z5E7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5E7_9STRA)

HSP 1 Score: 132 bits (333), Expect = 4.290e-32
Identity = 88/140 (62.86%), Postives = 90/140 (64.29%), Query Frame = 3

Query:    3 LRSMKQVASAASCKNINSRFCKSANTAAKTVLGVASSAFSDVRALYVGLTLALYGSAKTTSKQMTT--------------------------------------------ADVAAAESEENEIEDVKARAGGSCAVHADT 290
            LRSMKQVASAASCK INSRFCKSANTAAKTVLGVASSAFSDVRALYVGLTLALYGSAKTTSKQM+                                             +DVAA ESEENEIEDVKARAG SCA HA T
Sbjct:  272 LRSMKQVASAASCKYINSRFCKSANTAAKTVLGVASSAFSDVRALYVGLTLALYGSAKTTSKQMSEWTRRCVPNSNLPSTAKFLAACNVAYTDALPQRPTPLPVQPATAESDVAAVESEENEIEDVKARAGSSCAAHAGT 411

[Close]

BLAST of jgi.p|Trimin1|354599 vs. uniprot
Match: A0A835YYM7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYM7_9STRA)

HSP 1 Score: 126 bits (316), Expect = 8.130e-31
Identity = 86/138 (62.32%), Postives = 90/138 (65.22%), Query Frame = 3

Query:    3 LRSMKQVASAASCKNINSRFCKSANTAAKTVLGVASSAFSDVRALYVGLTLALYGSAKTTSKQMT------------------------------------------TADVAAAESEENEIEDVKARAGGSCAVHADT 290
            LRSMKQVASAASCKNINSRFCKSAN+AAKTVLGVA  AFSDVRALYVGLTLALYGSAKTTSKQM+                                           ADVAAAESEE+EIEDV+A AGGSCA HA T
Sbjct:  272 LRSMKQVASAASCKNINSRFCKSANSAAKTVLGVACGAFSDVRALYVGLTLALYGSAKTTSKQMSEWTRRCVPNSNLPSTVKFLAACNVAYADALAQTPAPLPVQLAVADVAAAESEESEIEDVEAPAGGSCA-HAGT 408

[Close]

BLAST of jgi.p|Trimin1|354599 vs. uniprot
Match: A0A836C7S3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7S3_9STRA)

HSP 1 Score: 121 bits (304), Expect = 9.790e-29
Identity = 77/104 (74.04%), Postives = 82/104 (78.85%), Query Frame = 3

Query:   24 ASAASCKNINSRFCKSANTAAKTVLGVASSAFSDVRALYVGLTLALYGSAKTTSKQMTTADVAAAESEENEIEDVKARAGGSCAVHADTDLVHQFRVGLDERLV 335
            AS +S  NINSRFCKSANTAAKTVLGVASSAFSDVRALYVGLTLALYGSAKTTSKQM+  +     SEENEI+DVKARAGGSCA HA T        GLD  L+
Sbjct:  247 ASPSSKTNINSRFCKSANTAAKTVLGVASSAFSDVRALYVGLTLALYGSAKTTSKQMS--EWTRRCSEENEIKDVKARAGGSCAAHAGTS-------GLDATLI 341

[Close]

BLAST of jgi.p|Trimin1|354599 vs. uniprot
Match: A0A835ZBV3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBV3_9STRA)

HSP 1 Score: 111 bits (278), Expect = 3.470e-27
Identity = 75/120 (62.50%), Postives = 77/120 (64.17%), Query Frame = 3

Query:   12 MKQVASAASCKNINSRFCKSANTAAKTVLGVASSAFSDVRALYVGLTLALYGSAKTTSKQMT------------------------------------------TADVAAAESEENEIED 245
            MKQVASAASCKNINSRFCKSANTAAKTVLGVASS+FSDVRALYVGLTLALYGSAKTTSKQM+                                           ADVAAAESEENEIED
Sbjct:    1 MKQVASAASCKNINSRFCKSANTAAKTVLGVASSSFSDVRALYVGLTLALYGSAKTTSKQMSEWTRRCVPNSNLPSTAKFLAACNVAYTDALPQRPTPLPVQPAVADVAAAESEENEIED 120

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|354599 vs. uniprot

BLAST of jgi.p|Trimin1|354599 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 13


Match Name	E-value	Identity	Description
A0A835Z0N2_9STRA	1.700e-133	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CF72_9STRA	4.460e-41	94.62	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835ZG17_9STRA	1.700e-38	68.12	Uncharacterized protein n=3 Tax=Tribonema minus Ta...	[more]
A0A835ZC61_9STRA	2.050e-34	63.57	Uncharacterized protein n=2 Tax=Tribonema minus Ta...	[more]
A0A835Z0Q8_9STRA	4.010e-33	64.44	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CES6_9STRA	2.050e-32	62.86	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835Z5E7_9STRA	4.290e-32	62.86	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YYM7_9STRA	8.130e-31	62.32	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836C7S3_9STRA	9.790e-29	74.04	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835ZBV3_9STRA	3.470e-27	62.50	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_285	contig	Contig_285:54917..63432 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|354599\|estExt_Genemark1.C_Ctg_2850007
Hectar predicted targeting category	other localisation
TranscriptId	354921
Track	FilteredModels1
ProteinId	354599

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|354599	gene_18671	Tribonema minus UTEX_B_3156	gene	Contig_285 54917..63432 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|354599	Trimin1\|354599\|estExt_Genemark1.C_Ctg_2850007	Tribonema minus UTEX_B_3156	polypeptide	Contig_285 54917..63421 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_18671_7	exon_18671_7	Tribonema minus UTEX_B_3156	exon	Contig_285 54917..54948 -
exon_18671_6	exon_18671_6	Tribonema minus UTEX_B_3156	exon	Contig_285 54999..55140 -
exon_18671_5	exon_18671_5	Tribonema minus UTEX_B_3156	exon	Contig_285 56162..56215 -
exon_18671_4	exon_18671_4	Tribonema minus UTEX_B_3156	exon	Contig_285 56704..56727 -
exon_18671_3	exon_18671_3	Tribonema minus UTEX_B_3156	exon	Contig_285 58410..58514 -
exon_18671_2	exon_18671_2	Tribonema minus UTEX_B_3156	exon	Contig_285 63017..63111 -
exon_18671_1	exon_18671_1	Tribonema minus UTEX_B_3156	exon	Contig_285 63238..63432 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_18671	CDS_18671	Tribonema minus UTEX_B_3156	CDS	Contig_285 63238..63421 -

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR5_18671	UTR5_18671	Tribonema minus UTEX_B_3156	five_prime_UTR	Contig_285 63422..63432 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_285:54917..63432-
coding sequence from alignment at Contig_285:54917..63432-

spliced messenger RNA

>mRNA_18671 ID=mRNA_18671|Name=jgi.p|Trimin1|354599|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=647bp|location=Sequence derived from alignment at Contig_285:54917..63432- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GGCTACGGAGCATGAAACAGGTGGCGTCAGCGGCGTCGTGCAAGAACATT
AACTCGCGCTTCTGCAAGAGCGCAAACACTGCGGCCAAGACTGTGTTGGG
GGTGGCCTCCAGTGCCTTCTCTGACGTCAGGGCTCTCTATGTGGGGCTCA
CCCTCGCTCTGTACGGCAGCGCCAAGACCACCAGCAAGCAGATGACCACG
GCAGATGTCGCTGCGGCGGAGAGCGAGGAGAATGAGATCGAGGACGTCAA
AGCGCGTGCAGGCGGCAGCTGCGCTGTGCACGCAGACACCGACCTGGTGC
ACCAGTTCAGGGTGGGGCTCGACGAACGGCTGGTGGAGGGCACCATTGTT
GCCATTAGCTTTGTACACAAGCACGGCGGCCGCGACGCTTACGCGGTGCA
GATCATCGGTGTGGAAGCCCAGTGCCTGAGCGGTTCCTTGCGGCTCCTGG
TCCTCAGAATAAAGGTGGGAGAGTGGCGGGCGGCGGCGGCGGCGACGGAG
ACGTCTGCAGGTGTTCAGGTGGCTGCTGAGCTGCTCGCGCATGCCAAGCA
GGGACAGCGCGTCGAGGCCAGCAGGGCCATGATGGACGAGATACAGCAGA
CGCTGGGGCCCTCGCGCGGCAATGCTCAGGCGGTGGATGCTGTCTAG

protein sequence of jgi.p|Trimin1|354599

>Trimin1|354599|estExt_Genemark1.C_Ctg_2850007 ID=Trimin1|354599|estExt_Genemark1.C_Ctg_2850007|Name=jgi.p|Trimin1|354599|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=212bp
MKQVASAASCKNINSRFCKSANTAAKTVLGVASSAFSDVRALYVGLTLAL
YGSAKTTSKQMTTADVAAAESEENEIEDVKARAGGSCAVHADTDLVHQFR
VGLDERLVEGTIVAISFVHKHGGRDAYAVQIIGVEAQCLSGSLRLLVLRI
KVGEWRAAAAATETSAGVQVAAELLAHAKQGQRVEASRAMMDEIQQTLGP
SRGNAQAVDAV*

mRNA from alignment at Contig_285:54917..63432-

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_18671 ID=mRNA_18671|Name=jgi.p|Trimin1|354599|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=8516bp|location=Sequence derived from alignment at Contig_285:54917..63432- (Tribonema minus UTEX_B_3156 )
GGCTACGGAGCATGAAACAGGTGGCGTCAGCGGCGTCGTGCAAGAACATT
AACTCGCGCTTCTGCAAGAGCGCAAACACTGCGGCCAAGACTGTGTTGGG
GGTGGCCTCCAGTGCCTTCTCTGACGTCAGGGCTCTCTATGTGGGGCTCA
CCCTCGCTCTGTACGGCAGCGCCAAGACCACCAGCAAGCAGATGAGTGAG
TGGACGCGGCGGTGCGTACCGAACTCAAACCTTCCCTCTACAGCAAAGTT
CCTGGCCGCGTGCAACGTCGCTTACGCAGATGCGCTCCCCCGGCCGCCGG
CGCCGGTGCCAGTTCAACCAGCCACGGCAGATGTCGCTGCGGCGGAGAGC
GAGGAGAATGAGATCGAGGACGTCAAAGCGCGTGCAGGCGGCAGCTGCGC
TGTGCACGCAGACACCGTATGACGCGACCGCACCATTGAATATTTGAGGT
GCGCACGTGTGCACAGAAGCCAGTAGGCATGCGTGAAGTTGAGAGTTTTG
CACGACATGCGTCATCATGACGTGGATGCTTGCTGCACGACGGCTTCATT
TCCATAGTCTGGAGGAAAGGCACTTCAATGCTGGCCGTGTACACAGCAGT
ATCACTGTCGGTGAGGCGCAGCGGTGGCAGCGCTGTGCTGCTGCACTGCG
CGGCGCAAAAGGTCTTGCTAGTCTGCTCTACGACGACAAGCTGGAACATG
CGATACGTTGTCCACGCTGTGAAAGTGGTTCAGGCATGATGCGGCGGGTG
CAGCAGGGCATGCGCACAAGCGTGTCACAACAAGCAATTGCTGCAGCGCC
AATGCCATTGTGTGCGCAGCAGCCATTAGCGCATTCATCACGCACCCTTC
ATTCATCGGGTTTTATGGGCACACGCACCAGCGGCTGTGCTCAGCGGCTG
TGCTGCGCTCTGTTCCCTGTTCCACTGCGATCCCAGCGAATAGAGAATGC
ACTACAACGGTTTCACAATAATATCAAAACATCAGCAATACTGCTTCTCA
GCGATGATACTCATTGGCGCCAAATGATGCAATGCACATATGAAACTGCG
GACTGAACCCCATTTCTTCTCCCCTGTCCCCCTGCTCAACCCCCTCTGCA
CCGTCTACATCCGGGTCCTGTTTTGCATCACCAGCCAGATGCGTCGAGGA
GGCCACGGGGAGGGGGCCAACGGCACGCGCTACGCACACACGCGAGCGAG
TGGTCATGCGGATGGCGCTAGCAGCGTCGGGATGGCGGTGACACAATGTT
GTACTTCTGAAGTAGTTGTGTTGAAGTTGCAGGAGGCATCGCTTGGTGTG
TCCTGGGGGCGCCGCGCGGCACTCTCAGCCTGCACAGTGGCACACGATTT
TGTGGTATTGAGTCAGGCGCTGGATGTGTTTGCGGCGCATTTGCGGTAAA
GAAACGCAGTGTGTTTGAGGTCAGAGCTGCCAATCTGCTCTGCAGAGGTG
ACCAATCACGTTGTGTCATTTGCTCAAGCGCCTTTCAAGTGCGTGGGGGA
CAGAGATCCGGTCAGACAAGCAACTTTGAGCTCCCGAGGGCGGCACTGCT
AAGGAAAGAGGTCGGACACACGGTCCTTGCAACTTGACACAACTGGATCG
ATTGGGCCTCAAAGCTAGAATGTGAACGACAAATAGTCATGCACTCAAGC
AGTCACTTGAACGAATGACGCTTATAAGCCACTACTCACATCTGCAGGGC
GCGTTTGACCACTGGGCCTGCGATGGCCATCGCAATGTCGACCGCATCGC
CAGTGACCTGCACAAGGATGCAGCAGTCTGAGAGGGCGTGACGCTCACCA
GCTGTCTGCCAGACTTACTCGACAGTATTGACTAGCCTCCGCAAGTCGCA
TTGTCCGGGTAGCGTTGTGCAAGCGGCAGTTGCGCCGCTGAGTCTGAAGC
CGTCACGCACTCTCGCGGATGAGTCTGCTCACCGACATGAAGAGGTTGTA
GTACTGTGACTGTTGGTACTTGAGAACCACGCTGCCGTTCAGGTCACTAT
ACCGAGGATAAGCGAGAGCTCATTTAGTCCCGGTGAGTTATCACTGCCGA
GTCTAAAGTGCGCTGTTGCCCGCGGGTCATGAGGTGTGGTCGTGGTTGAG
TCTGTTGATGGTGGTTTGTATCAGATGGCACTTGTGCACACTGCGGCTGC
TTTGTAATTTCTCAGTGATGAGAGGTGTCGTCGGTCGCAACATTGCACAC
ATGGGATGCATGGAGCAGGTGAGAGCTCTATCGCTGGCATGTGCGTGATT
GCTTGGCTTGACTGCAAGTCGTTCTGATGCAAACCAAGGGGCGTTTTAAA
TACGGGCACTGGGCATTTCACACAAACAGCACTTCATGCCGTTTCTGCAA
TTGCATCCATGCATCCATTGATCCATGGACTTAACACGTTAGGACAATGA
ACCATCTCGGCGTGGAGCACTGGGGCTCCCCCGTGCGGTCCGCCGTGCCG
CACTTAGTGCGGTTGTTGTAATGATCTATGCATCGTGACGAATTCAGCTG
CGGAGCTGCACCGTGCACGACAATAGACAGGTTTGCGTGCATAACAACAC
AAGAGTCAAGGGCAGGGCAGCGCAGCTGGCAAAACACGCACATGAGCCCG
ATCGATGTGCAGCGAGCATGCAACAACACGGACTATTGGTGTGGCTATCG
AGCGTGGCGCAGCGGCCTCACTAAAGCACCTTACGAATGCGCTGCTGGAA
TTGCAATGCCAATACGTTGGATGTTCACACAGCAGTGCAGCATACGAATC
TTGCAGTGGTTGCGGCAGTAGAGCAATCATGTTCATGAAAGAATACAAAT
TGCAGGCACTGACTCCATGGACTTGAGCACAGTGCGCATCGACCTTGTCT
CATTTTGACTTGCTGTCTTATGGTGTGTTTTCACACGTGTGTCTGAGGCC
CGATGATTATGTTGCTACCACTGTTGTACACCTGAGAGCTGCTGGCACCA
ATCACACTGCATAAGCTGCTGGCACCCTTTGCACGCTTGCTTCGATTTTG
CTGACACTACTTTCTAGCACCGTGATACAGGTGCATGTTTGCTGGCACGT
GTGCACGCGCTTTTAGATTGCCATTGTCATTTGTCACCACTTGGCTCCGT
GGATGCTGGCCTAGTGGCATGGGGAATGGTTGAGACTGTGGAAAGCACCT
GTGTACAACTGCATGTGCGTGTAAGTGTGTGTGTGGGGTGGGGGATGGGG
GTGACAGTTTGAGAAGATCGTGGCTATTGGGTAATCCATGCATGACCATC
ACCTTTATGATCAATCAGTTGCGAGACTGAGCGCCTCAAGCCTGTGTACC
AGAGGCCAGACAAAGGGCAAAGCATAGCGCTTTTGCTGAACGCGTTGTCC
TCATCTACCAGTCGTGATGCCTACACTGAGAGTTTGACACGGTGTACCTG
AAGAATATGACATGTGCCGCGGTGCGTGTGTGGCAGAGGAACAGCTGTTA
GACTGTGGCTTGCAACTAGTGCCCGGACACATGCTTGGGCGTCCTGACGC
GTAGTGTTTTCGCGGTGCTCCGCAGCATAGTCTGTATCCCACAAATGGGT
TGGGGATGACTGATGTTAGCGAGCGCCACTCTGGCTGAGTTGAGTCAATT
CTGCATGCCGCCGCTGTGCTCCCTGTTTCTGCGCAAAGATCAGTCACGCG
TTGAGCGACTGCGTCATCAGTATGTGAGCAGTCGCACGTGCCGCTGGCGC
AGAGCAGTTCTATGCCAACAGGTGAAGTACAAGCGCTGCGTCTGACTGGA
ATACAAGCCGAAGCACACAATATGGCACCCGGTCCGGTAGACGCTGATCT
GTGACAAATCGAAACGGTGCGAACCTGGCTGGCTGCCTGCTGTTTCCACA
ACAGGTCAGACGTGACGTGCGGCGCTAATGGCGCAGCGGCGGTCGTGGCG
CGGGACTCCTTTCGAAGGCTAGCGCTGTGCCCAGAGCCATGAGTAAGGCG
GATGACTGAGTGCCCTTGATCACTTGTGTGGATGCAGTCCCTTCACGGCA
ACAAAGGAAGCGTCGCTTGATGACCTCTCTGCAACTTGAAGTCCAGACTG
TATTGGTCCCACCGGCACCAAAAAATCCATGTATACATGCATGGCAGGTG
ATGCGTCCAACTGTGGCACTGCCAGGCTGCACCTGGACTCAGCCTGGTGA
GACATAAATCCGCATTATGATCACACGCGGAGACTCTGAATGCGTTGCTA
ACTGATGACGCGCAAGTTGAAGGTGTGCGATCGCATTGCAGCGTACCTCA
AGTGGTATGCCCTGGGACCGTCCCCTTCATACACGCACCAGGTGCGAAGT
CGCTTCTACCAACCAGCTACCATGCCACAATGTACATGATGCCCATGATA
TTAATATACTACTGAAGTGAAGGTACTCAGCACTGTTGCTCTGTAGCCAC
TGCGCACAGTCCAAGCGCATGGCCTGGTAAAAAAACACTTGGATGTAATC
AGCAGTAATTGTAGATAGTACTTGAACTTGACGTTGAGTAATAGTGTTCG
CTTCACACATGCGCTGCTGATGGTCGCGCAGCACCATGTTCAAGCGTTGC
ATCAGATGCGGACTTTGATGTGTTGGCGTTGAGGACTTGTGGCACTTCGA
GGCACGCGTCTGATGTGGCACAGCAGTGGCAGCGCTCATGAGCCTTGCAT
CTCATCAACCTGTGGTTTTTATCACTGTGTGTGACTGTTGCACAATTGTC
ATTTCGCTCATGTTCAGCATTGACCCATGAGCGGTTTGCACTACAAAGGA
AGTAAAGGCGTTGCCAGACCAAGCGTTGCTGCTCGACGAAGCTGGACCAT
TCATGGCGTTCCTCAAGAAAAAGGGGCCTCAACGGTGCAATGCCCACGTT
TGTCTCTGACTACGAAAGTGATGCTGCACGCATATTCGGCTGCACGCTTG
TTCGGCCGCACGCCCCAGGACCTGGTGCACCAGTTCAGGGTGGGGCTCGA
CGAACGGCTGGTGGAGGGCACCATTGTTGCCATTAGCTTTGTACACAAGC
ACGGCGGCCGCGACGCTTACGCGGTTCTGCTCAGTGACTTGTGCTGCATC
ATTAACCAAGCAGTGCACTAAAGTATGCTTGGCATTCAGTGCGCAAAGGG
CCTGATGTCCTTGAACGAGATTGGTTCAAAGTTTGCAAATCAATTACGCA
GCCTATGACGCTCGGCTGCACTTGGTAACAGGTAGGGTTAGGGCTAGGGC
TAAAGGCTAGCAGTGCACTTATAAATTGATACACGCGGCGAGACTTGCTG
AGCACTCTTGTAAAGAAGATGATGCCATGCCATGCAGGTGGCATGCAGGT
GGAATGAGCTGAGCTGTATGCTCATCATCTGTCGCTGAACTTTCAAACCG
CGTCTTGTGGTACTAATAACCGCAGTGTAAGACACTGGGTTTGTACCGCC
ACTCACCAAAGACCACTGACAAGCCCATGATTGGTATGAAACACATCTCA
CCTGATGCTGGTAGGGCCATCAATCGCACTGGTCCTGAAAGCTGCACTGT
CTTTGGTTCGATCAGTTGACAATGCCAGTAAGATCCTTGCACCGTTGGTA
GCATTGGCACTGCAAGATCATCAGCCATGATTCTGCGGCACCTGCAATAA
CCATTGACCACAACAAACATCAGGTAGGGATATCGCGTCCTGCACCATAT
AAACTGAAAGTGCACTTTGATAACATAGGTACCGGTACCGGCACATGGAG
GTTCCGTGCGCGGCACCTTTCAGGATGCACACAGGATACAAGTGCAGAAG
CTGGCCAAAAACACAAACTGCAAGGGCAGCTGCATCGGACAGTTGATGCA
TGCCGAGAATCGCGCACTTGTGCAGCCAGTCCATTACAAGGGTTCAAGGA
AGGCGAGCACAACAAGCCCGTGGCAGAGGTAGTGCAGGGAAGTACCCGGC
GCCCCGCATACATAGCATGAGCCCGCACTTGCGAAGGATCATACCAACTT
TACATGGGAGTTGAGAATGAAAGAACTACTGAAGTGTCAGGAGTGCTTAT
GCTCATATATGGGGCGAATCGAAATTAGATACGTGCCTGCAAGAGACGTT
GAAAGGGATTGTGTCAAAGCGTGCTTTTATTCAGACACCACCACCGCCGC
GTGCAACCCTCATGTGCAACTTGCGAATCCTAGTGTAAGCCTGTACAGGA
GCGGAACGGTGCTGCATGGCTACACTCACGCCTGGCATTCAGTGATGGTA
GCTTTCTACATCCTTCAAGTATCACGCTCAAATCCATTTATAAGATGTAG
TACACTGATGAGTGCCTTTGCCTAGTCAGGAGTCGCTGTTTGTGACAAGT
CCTGGGTTATGAACCTACCACAACGTATACATCTGCTGCTGTTCCGTTTT
GGTGCAGAGCAGGATGTGCCAAATATAATGACATACCGCACTACCCGAGA
GCTGTGCGTCTCATGGCGGAGAACAGCAGATATTGAAGGACATCAGTGGC
GTTGACGGGCCCTTTCAGGTAGATCTCAGCGTGGTGCGCGTCCATACATA
GCTCATCGTAAAGGCTGGCGTAGGCACAACACTTTTTGACACTGAAGTGA
GTGCGCACCATTGAACCATGGCGCTACAACCACAGCCTACCACGGATCGA
TGACGTCACGGTAAAGCACTACACAGAGGGGTTTAACAAAAGACCATGAC
AGGAGCAGCTACCGGCATATGCATTGCATCTGATCACCTGCCCCTCGGCA
CGCAGGTGCAGATCATCGGTGTGGAAGCCGTAGAGGAGAGAGCATACTTT
GTGCCTGACTTCCAGATGCCAAAATGGGACGCAGGTGACACCCGTGACAG
GCGTTTCTACTTCTAAGTACGTGAACCCCCACGCTCATCGCTGCTGGTAA
CAAACAGCACAAAACTTCTCAATGTCGATGTCAATACATGTGTGATCAAC
TGAGCAGATGGCAGCCACTTGCTACTGGTTGACTACCGTTCAGCATTGAC
TGCTTGCATTCTTCTAGACTGGGTTTGAGCACTCACTGCCGCCATTGAGC
AATTGGTCATTTCGTCCATCTTTGTGTAATCATGAATGCGCAGAAACAGA
AATCTCACGGCTGCTTGATTTACTGTAACTGCCGGGCTTGGCTGACGCGC
GCATCTCAGGGTGTGCGGTGTGTACTACCTGAAGGTGCTTGCCTTTGTAT
GAGAGCAGCAACCTCGCTGGTGTGTGATCTTCGTCACTCCAGTCATGACT
GCGCCGTCCATCGCCAGCAGTGCCTGAGCGGTTCCTTGCGGCTCCTGGTC
CTCAGAATAAAGGTGGGAGAGGTGCGTGCTGAGCTGCGCACGATCGACTG
GCGTGTAACCGCACGAATTCACTGCTCTATAGGCAATGTGCGGAGCGCAG
GGCGAGCGGCAGAAATCACCCAAAGTGCAGTCAGTGCAGCTGCAGACACG
ATGGTACAGCGACATGTCTCGAGTTATATGCATGTGAGTGGCAACTGATC
TTGAAGTTTCCGGCAGTAGCTGTGCGCTTCCTAGCAGCTTCCTGTCCTCA
GAAAGGTGGGAGACATGAATAATAAGCTGCGACCAAGACAAATTCACTGC
TCATTGGGCAGTGTGCGGAGCGCATCAAGCTGTGGCAATCATGTCCAGGC
AGAGGTAATACGTCAGATGCGCAGGAGATCAGCAGGCACCCAAGTTGTAC
TGAATTACCCGAGCCTTGAAGTTGGTATATGCAGTGCGGGCCGAGCGGCG
GAAAGGCAACTGATCTTGAAGGTGCGCGAAGAGCACAACGGGCACACTGC
TACTTTCTCGTCTCAGTGGCATGCAACCTCACTGCCGCATTTTTGCGACG
TACCTCACTGGTTTTGGTCGTGCACGTGCCTCAGGCTGTTGCCTGATTTT
TCAAAAGCCATCTGGTGCGTCGCAGTGCAACGCACAGGGCGCATCAGCGA
CCTTTCTGCACTATCGCCGCCACCCCCCCCGGCACCCCCCCTGAACCGTT
CAAGCAGACCCAGTGCACGAAACGTGCAGGGGAAGCATCGGGGCAGTCAC
GGCGGTGTTGCAGAGGCTCGCAAGAGTGAAAGCACAAACGCAACACGCGT
CGGCAGCAGCACGCAGGATGCAGTCGACAGCAGCCCGAGCGGCATCGGAG
GCGATGCAGTGTGGGCCCCTCAAATAATACGTGCCAGCATGCCGTTCAGC
ATATGCGGGCAGACCATCAACATGGCACCGCCAGCGCCGCAGGTGCTCAC
CTCTGTGCCTCCGTGAACATGGCAGTTGCTGGCGGCGTTGGCAGCGGCGC
AGGCGCAAAGCCGCTTCGAGCGTACGCGGCGAATCGCGCCAGTGGCGGGC
GGCGGCGGCGGCGACGGAGACGTCTGCAGGTGTTCAGGTGGCTGCTGAGC
TGCTCGCGCATGCCAAGCAGGGACAGCGCGTCGAGGCCAGCAGGGCCATG
ATGGACGAGATACAGCAGACGCTGGGGCCCTCGCGTAAGCTGCTCCTGCG
CCGCAACATGGCAGAGCAGCGCATGCGCCATGAGGCGGCAATGCTCAGGC
GGTGGATGCTGTCTAG

Coding sequence (CDS) from alignment at Contig_285:54917..63432-

>mRNA_18671 ID=mRNA_18671|Name=jgi.p|Trimin1|354599|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=636bp|location=Sequence derived from alignment at Contig_285:54917..63432- (Tribonema minus UTEX_B_3156 )
ATGAAACAGGTGGCGTCAGCGGCGTCGTGCAAGAACATTAACTCGCGCTT
CTGCAAGAGCGCAAACACTGCGGCCAAGACTGTGTTGGGGGTGGCCTCCA
GTGCCTTCTCTGACGTCAGGGCTCTCTATGTGGGGCTCACCCTCGCTCTG
TACGGCAGCGCCAAGACCACCAGCAAGCAGATGACCACGGCAGATGTCGC
TGCGGCGGAGAGCGAGGAGAATGAGATCGAGGACGTCAAAGCGCGTGCAG
GCGGCAGCTGCGCTGTGCACGCAGACACCGACCTGGTGCACCAGTTCAGG
GTGGGGCTCGACGAACGGCTGGTGGAGGGCACCATTGTTGCCATTAGCTT
TGTACACAAGCACGGCGGCCGCGACGCTTACGCGGTGCAGATCATCGGTG
TGGAAGCCCAGTGCCTGAGCGGTTCCTTGCGGCTCCTGGTCCTCAGAATA
AAGGTGGGAGAGTGGCGGGCGGCGGCGGCGGCGACGGAGACGTCTGCAGG
TGTTCAGGTGGCTGCTGAGCTGCTCGCGCATGCCAAGCAGGGACAGCGCG
TCGAGGCCAGCAGGGCCATGATGGACGAGATACAGCAGACGCTGGGGCCC
TCGCGCGGCAATGCTCAGGCGGTGGATGCTGTCTAG