Trimin1|348622|estExt_Genemark1.C_Ctg_280054 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|348622
Unique NameTrimin1|348622|estExt_Genemark1.C_Ctg_280054
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length127
Homology
BLAST of jgi.p|Trimin1|348622 vs. uniprot
Match: A0A835YXU0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXU0_9STRA)

HSP 1 Score: 253 bits (647), Expect = 2.100e-85
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0
Query:    1 STPVTALQPPAAPRCSSNRRAALFSVFLPVAAAAGIALGEPALAAAAETAEGKRLWLSGKSGGPKTDDKAGTKKDSKYLRCLSNCLAGCQKPSYDGERDRDECLQRCQDSCCFSYVQCTYPVVQNK 126
            STPVTALQPPAAPRCSSNRRAALFSVFLPVAAAAGIALGEPALAAAAETAEGKRLWLSGKSGGPKTDDKAGTKKDSKYLRCLSNCLAGCQKPSYDGERDRDECLQRCQDSCCFSYVQCTYPVVQNK
Sbjct:    1 STPVTALQPPAAPRCSSNRRAALFSVFLPVAAAAGIALGEPALAAAAETAEGKRLWLSGKSGGPKTDDKAGTKKDSKYLRCLSNCLAGCQKPSYDGERDRDECLQRCQDSCCFSYVQCTYPVVQNK 126          
BLAST of jgi.p|Trimin1|348622 vs. uniprot
Match: D8LIY2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIY2_ECTSI)

HSP 1 Score: 122 bits (305), Expect = 1.800e-32
Identity = 60/98 (61.22%), Postives = 69/98 (70.41%), Query Frame = 0
Query:   30 VAAAAGIALGEPALAAAAETAEGKRLWLSGKSGGPK-TDDKAGTKKDSKYLRCLSNCLAGCQKPSYDGERDRDECLQRCQDSCCFSYVQCTYPVVQNK 126
            V A  G+A  E A AA       ++ W+SGK   PK +DDK GT+K+SKYLRCLSNCLA CQKP+Y  ERDR+ECLQ CQD CC SY QCTY V QNK
Sbjct:   97 VGAGGGLAFPEEARAAKGSADATQKEWISGKGAQPKGSDDKTGTRKESKYLRCLSNCLADCQKPTYGPERDREECLQACQDECCMSYEQCTYTVTQNK 194          
BLAST of jgi.p|Trimin1|348622 vs. uniprot
Match: A0A0G4ECE9_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4ECE9_VITBC)

HSP 1 Score: 97.8 bits (242), Expect = 1.960e-23
Identity = 55/109 (50.46%), Postives = 70/109 (64.22%), Query Frame = 0
Query:   18 NRRAALFSVFLPVAAAAGIALGEPALAAAAETAEG-KRLWLSGKSGGPKTDDKA--GTKKDSKYLRCLSNCLAGCQKP-SYDGERDRDECLQRCQDSCCFSYVQCTYPV 122
            +RR A     +   AAA   L     A+AAE  EG KRLW+SGKS  PK D KA  GTK+D K+L+CLS CL+ C+KP SY   +  DECL+ C+D CCF+Y QC+Y +
Sbjct:   45 SRRDAPLLPLISAIAAASWQLAVSISASAAEGGEGEKRLWISGKSTEPKKDPKAREGTKRDPKFLKCLSQCLSECKKPGSYGYSKSEDECLEDCRDECCFTYEQCSYAI 153          
BLAST of jgi.p|Trimin1|348622 vs. uniprot
Match: A0A7S2UWJ7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWJ7_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 9.200e-22
Identity = 54/106 (50.94%), Postives = 70/106 (66.04%), Query Frame = 0
Query:   18 NRRAALFSVFLPVAAAAGIALGEPALAAAAETAEGKRLWLSGKSGGPK-TDDKAGTKKDSKYLRCLSNCLAGCQKPSYDGERDRDECLQRCQDSCCFSYVQCTYPV 122
             RRAA+ +     AA+ G+ L  P   + A+ A+ +RLWLSGK   PK + D  GTKKD  +LRCLSNCLA CQKP+   +RDR ECL+ C+D CC +Y QCTY +
Sbjct:  110 GRRAAVATAL---AASLGVIL--PPAFSPADAAD-ERLWLSGKGDKPKDSKDTKGTKKDINFLRCLSNCLAVCQKPTSGVQRDRSECLEDCRDECCQTYEQCTYTI 209          
BLAST of jgi.p|Trimin1|348622 vs. uniprot
Match: A0A7S2H145_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H145_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 7.020e-19
Identity = 41/73 (56.16%), Postives = 53/73 (72.60%), Query Frame = 0
Query:   49 TAEGKRLWLSGKSGGPK-TDDKAGTKKDSKYLRCLSNCLAGCQKPSYDGER-DRDECLQRCQDSCCFSYVQCT 119
            +AE  +LW+SGKS  PK + DK GTKKD+K+LRCLSNC++ CQ+    G+  DRD C  +CQD CC +Y QCT
Sbjct:   64 SAEPSKLWISGKSEKPKDSKDKTGTKKDTKFLRCLSNCVSDCQQLGATGKMTDRDTCYAQCQDDCCETYEQCT 136          
BLAST of jgi.p|Trimin1|348622 vs. uniprot
Match: W7U4A4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U4A4_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 2.030e-17
Identity = 37/68 (54.41%), Postives = 47/68 (69.12%), Query Frame = 0
Query:   54 RLWLSGKSGGPK-TDDKAGTKKDSKYLRCLSNCLAGCQKPSYDGERDRDECLQRCQDSCCFSYVQCTY 120
            R W+SGKS  P+ + D+ GTK+DS YLRCLS+C   C+KP     +D  ECL+ CQD CC +Y QCTY
Sbjct:  163 RRWISGKSEKPRGSKDRTGTKRDSNYLRCLSDCTTECRKPGQGPSKDNAECLEACQDYCCKTYEQCTY 230          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348622 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A835YXU0_9STRA2.100e-85100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LIY2_ECTSI1.800e-3261.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A0G4ECE9_VITBC1.960e-2350.46Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
A0A7S2UWJ7_9STRA9.200e-2250.94Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2H145_9STRA7.020e-1956.16Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
W7U4A4_9STRA2.030e-1754.41Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_28contigContig_28:496154..497566 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348622mRNA_9002Tribonema minus UTEX_B_3156 mRNAContig_28 496152..497896 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|348622|estExt_Genemark1.C_Ctg_280054 ID=Trimin1|348622|estExt_Genemark1.C_Ctg_280054|Name=jgi.p|Trimin1|348622|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=127bp
STPVTALQPPAAPRCSSNRRAALFSVFLPVAAAAGIALGEPALAAAAETA
EGKRLWLSGKSGGPKTDDKAGTKKDSKYLRCLSNCLAGCQKPSYDGERDR
DECLQRCQDSCCFSYVQCTYPVVQNK*
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