Trimin1|354553|estExt_Genemark1.C_Ctg_2690004 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|354553
Unique NameTrimin1|354553|estExt_Genemark1.C_Ctg_2690004
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length284
Homology
BLAST of jgi.p|Trimin1|354553 vs. uniprot
Match: A0A835YYM1_9STRA (Peptidylprolyl isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYM1_9STRA)

HSP 1 Score: 496 bits (1278), Expect = 2.000e-176
Identity = 283/283 (100.00%), Postives = 283/283 (100.00%), Query Frame = 0
Query:    1 MPGWDVAVQTMEKGERASIICSPQYAYGEAGAPPKIPPGASLECELELLDWEDVAARYSEYARPGETHEERMERWEQEIESGTSPIKEDVGPQPGIRTVTADEVTKGKMVDVNDPQVRRAAARQLVCGQGEGYTYLEKGAFLDLYVTVPEGTRAXXXXXXXXXXXXXXXXXAANEXXXXXXXXXXXXXXXXXADVLCDIAPRRLSLRITAQPDAPPLTILEGTLHGRVALDGSYWVMSEVAPEAYDELRSDVGFGLTARGAFVQVYLEKLPPDDTIWPDVFAE 283
            MPGWDVAVQTMEKGERASIICSPQYAYGEAGAPPKIPPGASLECELELLDWEDVAARYSEYARPGETHEERMERWEQEIESGTSPIKEDVGPQPGIRTVTADEVTKGKMVDVNDPQVRRAAARQLVCGQGEGYTYLEKGAFLDLYVTVPEGTRAXXXXXXXXXXXXXXXXXAANEXXXXXXXXXXXXXXXXXADVLCDIAPRRLSLRITAQPDAPPLTILEGTLHGRVALDGSYWVMSEVAPEAYDELRSDVGFGLTARGAFVQVYLEKLPPDDTIWPDVFAE
Sbjct:    1 MPGWDVAVQTMEKGERASIICSPQYAYGEAGAPPKIPPGASLECELELLDWEDVAARYSEYARPGETHEERMERWEQEIESGTSPIKEDVGPQPGIRTVTADEVTKGKMVDVNDPQVRRAAARQLVCGQGEGYTYLEKGAFLDLYVTVPEGTRAXXXXXXXXXXXXXXXXXAANEXXXXXXXXXXXXXXXXXADVLCDIAPRRLSLRITAQPDAPPLTILEGTLHGRVALDGSYWVMSEVAPEAYDELRSDVGFGLTARGAFVQVYLEKLPPDDTIWPDVFAE 283          
BLAST of jgi.p|Trimin1|354553 vs. uniprot
Match: D8LCA4_ECTSI (Peptidylprolyl isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCA4_ECTSI)

HSP 1 Score: 157 bits (397), Expect = 1.070e-40
Identity = 98/294 (33.33%), Postives = 147/294 (50.00%), Query Frame = 0
Query:    3 GWDVAVQTMEKGERASIICSPQYAYGEAGAPPKIPPGASLECELELLDWEDVAARYSEYARPGETHEERMERWEQEIESGTSPIKEDVGPQPGIRTVTADEVT--------KGKMV-DVNDPQVRRAAARQLVCGQGEGYTYLEKGAFLDLYVTVPEGTRAXXXXXXXXXXXXXXXXXAANEXXXXXXXXXXXXXXXXXADVLCDIAPRRLSLRITAQPDAPPLTILEGTLHGRVALDGSYWVMSEVAPE-----AYDELRSDVGFGLTARG-AFVQVYLEKLPPDDTIWPDVF 281
            GWD A+  M +GE A++IC PQYA+G AGAPP+IPP A++E  LEL DW D+AA Y+      ET EE  ERW +++  GTSP+K++ G    ++   + + +        +GK + D+   + R   A+Q V G    + Y+E+  +LDLY+ VP GTRA                                       DV  +I P R+ + +          + +G   G+VALDG +W+MS+++ +     A      +V  G   RG   VQV+LEK  P DT+W +V+
Sbjct:  286 GWDKAISAMHRGEVATLICGPQYAFGAAGAPPRIPPNATVETRLELEDWLDLAAEYNAVPGKVETDEELRERWSEDLADGTSPMKDEAGLNKKLQAEMSAKASATPENTDHRGKKIYDLESKEAREIMAKQKVQGYTPDFGYVERANYLDLYIPVPAGTRAK--------------------------------------DVTVEIHPDRMLVVVKGTG-----VVTQGHFQGKVALDGCHWLMSDLSLDPPGSTALGTQDDEVRQGPVYRGETCVQVFLEKRKPFDTLWENVY 536          
BLAST of jgi.p|Trimin1|354553 vs. uniprot
Match: A0A6J2X8A5_SITOR (Peptidylprolyl isomerase n=1 Tax=Sitophilus oryzae TaxID=7048 RepID=A0A6J2X8A5_SITOR)

HSP 1 Score: 80.5 bits (197), Expect = 1.920e-13
Identity = 40/85 (47.06%), Postives = 57/85 (67.06%), Query Frame = 0
Query:    3 GWDVAVQTMEKGERASIICSPQYAYGEAGAPPKIPPGASLECELELLDW--EDVAARYS------EYARPGETHEERMERWEQEI 79
            GWD  V TM+KGERA + C+P+YAYGEAG+PP IPP ++L+ ++E+LDW  ED++ ++       E   PGE +E   E  + EI
Sbjct:   71 GWDFGVATMKKGERAILTCTPEYAYGEAGSPPTIPPSSTLKFDVEVLDWKCEDLSPKHDGGIERLEIITPGEGYETPNELSQVEI 155          
BLAST of jgi.p|Trimin1|354553 vs. uniprot
Match: A0A653DL88_CALMS (Peptidylprolyl isomerase n=1 Tax=Callosobruchus maculatus TaxID=64391 RepID=A0A653DL88_CALMS)

HSP 1 Score: 78.2 bits (191), Expect = 3.630e-13
Identity = 30/49 (61.22%), Postives = 42/49 (85.71%), Query Frame = 0
Query:    4 WDVAVQTMEKGERASIICSPQYAYGEAGAPPKIPPGASLECELELLDWE 52
            WD+ V TM+KGERA + C+P+YAYGEAG+PP IPP ++L+ ++E+LDWE
Sbjct:   72 WDIGVATMKKGERAMLTCAPEYAYGEAGSPPTIPPNSTLKFDVEVLDWE 120          
BLAST of jgi.p|Trimin1|354553 vs. uniprot
Match: A0A7S3MPV9_9SPIT (Peptidylprolyl isomerase (Fragment) n=1 Tax=Favella ehrenbergii TaxID=182087 RepID=A0A7S3MPV9_9SPIT)

HSP 1 Score: 74.3 bits (181), Expect = 1.000e-12
Identity = 33/50 (66.00%), Postives = 40/50 (80.00%), Query Frame = 0
Query:    3 GWDVAVQTMEKGERASIICSPQYAYGEAGAPPKIPPGASLECELELLDWE 52
            GW+VAV  M KGERASI CSPQYAYG+ G PP IPP A+L  ++EL+D+E
Sbjct:   66 GWEVAVGAMAKGERASITCSPQYAYGKKGIPPLIPPDATLVFDVELIDFE 115          
BLAST of jgi.p|Trimin1|354553 vs. uniprot
Match: A0A653DKR1_CALMS (Peptidylprolyl isomerase n=1 Tax=Callosobruchus maculatus TaxID=64391 RepID=A0A653DKR1_CALMS)

HSP 1 Score: 78.2 bits (191), Expect = 1.160e-12
Identity = 30/49 (61.22%), Postives = 42/49 (85.71%), Query Frame = 0
Query:    4 WDVAVQTMEKGERASIICSPQYAYGEAGAPPKIPPGASLECELELLDWE 52
            WD+ V TM+KGERA + C+P+YAYGEAG+PP IPP ++L+ ++E+LDWE
Sbjct:   72 WDIGVATMKKGERAMLTCAPEYAYGEAGSPPTIPPNSTLKFDVEVLDWE 120          
BLAST of jgi.p|Trimin1|354553 vs. uniprot
Match: A0A2T7PJ74_POMCA (Peptidylprolyl isomerase n=1 Tax=Pomacea canaliculata TaxID=400727 RepID=A0A2T7PJ74_POMCA)

HSP 1 Score: 77.8 bits (190), Expect = 1.630e-12
Identity = 32/48 (66.67%), Postives = 39/48 (81.25%), Query Frame = 0
Query:    4 WDVAVQTMEKGERASIICSPQYAYGEAGAPPKIPPGASLECELELLDW 51
            WD+ V TM+KGE A + C P+YAYGEAG+PPKIPP A+L  E+ELLDW
Sbjct:   73 WDIGVATMKKGELARLTCKPEYAYGEAGSPPKIPPNATLIFEVELLDW 120          
BLAST of jgi.p|Trimin1|354553 vs. uniprot
Match: A0A7S2TWK4_9EUKA (Peptidylprolyl isomerase n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TWK4_9EUKA)

HSP 1 Score: 73.9 bits (180), Expect = 2.580e-12
Identity = 30/53 (56.60%), Postives = 39/53 (73.58%), Query Frame = 0
Query:    4 WDVAVQTMEKGERASIICSPQYAYGEAGAPPKIPPGASLECELELLDWEDVAA 56
            WD+A  TM  GERA + C P+YAYGE G+PPKIPP A+L+ ++EL+ W D  A
Sbjct:  124 WDLAFATMNIGERAMLTCEPEYAYGERGSPPKIPPDATLKFDVELISWRDAYA 176          
BLAST of jgi.p|Trimin1|354553 vs. uniprot
Match: M1VGN1_CYAM1 (Peptidylprolyl isomerase n=2 Tax=cellular organisms TaxID=131567 RepID=M1VGN1_CYAM1)

HSP 1 Score: 77.4 bits (189), Expect = 2.610e-12
Identity = 34/52 (65.38%), Postives = 40/52 (76.92%), Query Frame = 0
Query:    3 GWDVAVQTMEKGERASIICSPQYAYGEAGAPPKIPPGASLECELELLDWEDV 54
            GWD+AV++M KGE A    +P YAYGEAGAPPKIPP A+LE E+ELL W  V
Sbjct:  157 GWDIAVKSMAKGEVAVFEIAPSYAYGEAGAPPKIPPNATLEFEIELLSWHSV 208          
BLAST of jgi.p|Trimin1|354553 vs. uniprot
Match: A0A1Y1N7S5_PHOPY (Peptidylprolyl isomerase n=2 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1N7S5_PHOPY)

HSP 1 Score: 77.0 bits (188), Expect = 2.840e-12
Identity = 29/49 (59.18%), Postives = 42/49 (85.71%), Query Frame = 0
Query:    4 WDVAVQTMEKGERASIICSPQYAYGEAGAPPKIPPGASLECELELLDWE 52
            WD+ V TM+KGERA + C+P+YAYGEAG+PP IPP ++L+ ++E+L+WE
Sbjct:   71 WDIGVATMKKGERAMLTCAPEYAYGEAGSPPNIPPNSTLKFDVEVLEWE 119          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|354553 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YYM1_9STRA2.000e-176100.00Peptidylprolyl isomerase n=1 Tax=Tribonema minus T... [more]
D8LCA4_ECTSI1.070e-4033.33Peptidylprolyl isomerase n=2 Tax=Ectocarpus TaxID=... [more]
A0A6J2X8A5_SITOR1.920e-1347.06Peptidylprolyl isomerase n=1 Tax=Sitophilus oryzae... [more]
A0A653DL88_CALMS3.630e-1361.22Peptidylprolyl isomerase n=1 Tax=Callosobruchus ma... [more]
A0A7S3MPV9_9SPIT1.000e-1266.00Peptidylprolyl isomerase (Fragment) n=1 Tax=Favell... [more]
A0A653DKR1_CALMS1.160e-1261.22Peptidylprolyl isomerase n=1 Tax=Callosobruchus ma... [more]
A0A2T7PJ74_POMCA1.630e-1266.67Peptidylprolyl isomerase n=1 Tax=Pomacea canalicul... [more]
A0A7S2TWK4_9EUKA2.580e-1256.60Peptidylprolyl isomerase n=1 Tax=Lotharella oceani... [more]
M1VGN1_CYAM12.610e-1265.38Peptidylprolyl isomerase n=2 Tax=cellular organism... [more]
A0A1Y1N7S5_PHOPY2.840e-1259.18Peptidylprolyl isomerase n=2 Tax=Photinus pyralis ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008978HSP20-like chaperoneGENE3D2.60.40.790coord: 174..283
e-value: 6.9E-10
score: 40.9
IPR008978HSP20-like chaperoneSUPERFAMILY49764HSP20-like chaperonescoord: 179..281
IPR046357Peptidyl-prolyl cis-trans isomerase domain superfamilyGENE3D3.10.50.40coord: 1..72
e-value: 1.3E-17
score: 65.8
IPR001179FKBP-type peptidyl-prolyl cis-trans isomerase domainPFAMPF00254FKBP_Ccoord: 2..49
e-value: 3.6E-10
score: 40.0
IPR001179FKBP-type peptidyl-prolyl cis-trans isomerase domainPROSITEPS50059FKBP_PPIASEcoord: 1..52
score: 16.404095
IPR007052CS domainPFAMPF04969CScoord: 177..238
e-value: 4.3E-4
score: 21.2
IPR007052CS domainPROSITEPS51203CScoord: 164..281
score: 9.205497
NoneNo IPR availablePANTHERPTHR10516:SF420FK506-BINDING PROTEIN 59coord: 3..67
NoneNo IPR availablePANTHERPTHR10516PEPTIDYL-PROLYL CIS-TRANS ISOMERASEcoord: 3..67
NoneNo IPR availableSUPERFAMILY54534FKBP-likecoord: 2..54

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_269contigContig_269:21957..26420 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|354553mRNA_18510Tribonema minus UTEX_B_3156 mRNAContig_269 21957..26420 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|354553|estExt_Genemark1.C_Ctg_2690004 ID=Trimin1|354553|estExt_Genemark1.C_Ctg_2690004|Name=jgi.p|Trimin1|354553|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=284bp
MPGWDVAVQTMEKGERASIICSPQYAYGEAGAPPKIPPGASLECELELLD
WEDVAARYSEYARPGETHEERMERWEQEIESGTSPIKEDVGPQPGIRTVT
ADEVTKGKMVDVNDPQVRRAAARQLVCGQGEGYTYLEKGAFLDLYVTVPE
GTRAEKGAFLDLYVTVPQGTRAANEKGAFLDLYVTVPEGTRAADVLCDIA
PRRLSLRITAQPDAPPLTILEGTLHGRVALDGSYWVMSEVAPEAYDELRS
DVGFGLTARGAFVQVYLEKLPPDDTIWPDVFAE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008978HSP20-like_chaperone
IPR046357PPIase_dom_sf
IPR001179PPIase_FKBP_dom
IPR007052CS_dom