mRNA_16300 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|181522
Unique NamemRNA_16300
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|181522 vs. uniprot
Match: A0A835Z038_9STRA (Metallo-dependent phosphatase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z038_9STRA)

HSP 1 Score: 514 bits (1324), Expect = 8.910e-185
Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 1
Query:    1 MLIQFLSDVHLEQGAVPFSDVVTPAADLLIVAGDVAPARHFSLPYFVRHCSEAFEKVLWVYGNHEWYSQCESMDEIESHMADLISEYSNVSIMNRDVIEWRGVNFVGCTMWSHVPASAREEAALCVNDYRFVRKEHGPVSPADTDAFHQRDSAFLSSNSTADSVVITHHAPRTRTTSHPRYAGCSNNCCFATDMNLPAMPKLWIAGHTHFNFDFVDGDTRFVSNMFRNENYRVPFSRCKTIEI 729
            MLIQFLSDVHLEQGAVPFSDVVTPAADLLIVAGDVAPARHFSLPYFVRHCSEAFEKVLWVYGNHEWYSQCESMDEIESHMADLISEYSNVSIMNRDVIEWRGVNFVGCTMWSHVPASAREEAALCVNDYRFVRKEHGPVSPADTDAFHQRDSAFLSSNSTADSVVITHHAPRTRTTSHPRYAGCSNNCCFATDMNLPAMPKLWIAGHTHFNFDFVDGDTRFVSNMFRNENYRVPFSRCKTIEI
Sbjct:    1 MLIQFLSDVHLEQGAVPFSDVVTPAADLLIVAGDVAPARHFSLPYFVRHCSEAFEKVLWVYGNHEWYSQCESMDEIESHMADLISEYSNVSIMNRDVIEWRGVNFVGCTMWSHVPASAREEAALCVNDYRFVRKEHGPVSPADTDAFHQRDSAFLSSNSTADSVVITHHAPRTRTTSHPRYAGCSNNCCFATDMNLPAMPKLWIAGHTHFNFDFVDGDTRFVSNMFRNENYRVPFSRCKTIEI 243          
BLAST of jgi.p|Trimin1|181522 vs. uniprot
Match: A0A835YX12_9STRA (Metallophos domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX12_9STRA)

HSP 1 Score: 452 bits (1164), Expect = 2.470e-156
Identity = 212/231 (91.77%), Postives = 219/231 (94.81%), Query Frame = 1
Query:   43 AVPFSD--VVTPAADLLIVAGDVAPARHFSLPYFVRHCSEAFEKVLWVYGNHEWYSQCESMDEIESHMADLISEYSNVSIMNRDVIEWRGVNFVGCTMWSHVPASAREEAALCVNDYRFVRKEHGPVSPADTDAFHQRDSAFLSSNSTADSVVITHHAPRTRTTSHPRYAGCSNNCCFATDMNLPAMPKLWIAGHTHFNFDFVDGDTRFVSNMFRNENYRVPFSRCKTIEI 729
            AVP  +  VVTPAA+LLIVAGDVAPA HF+LPYFVRHCSEAFEKVLWVYGNHEWYS+CESMDE  SHMADLISEYSNVS+MN DV+EWRGV FVGCTMWSHVP SAREEAALCVNDYRFVRK HGPVSPADTDAFHQRDSAFLSSNSTADSVVITHHAPRTRTTSHPRYAGCSNNCCFATDMNLPAMPKLWIAGHTHFNFDFVDGDTRFVSNMFRNENYRVPFS CKT+EI
Sbjct:  280 AVPLHNTYVVTPAAELLIVAGDVAPAHHFALPYFVRHCSEAFEKVLWVYGNHEWYSRCESMDESASHMADLISEYSNVSVMNPDVVEWRGVKFVGCTMWSHVPVSAREEAALCVNDYRFVRKAHGPVSPADTDAFHQRDSAFLSSNSTADSVVITHHAPRTRTTSHPRYAGCSNNCCFATDMNLPAMPKLWIAGHTHFNFDFVDGDTRFVSNMFRNENYRVPFSPCKTVEI 510          
BLAST of jgi.p|Trimin1|181522 vs. uniprot
Match: A0A835Z861_9STRA (Metallo-dependent phosphatase-like protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z861_9STRA)

HSP 1 Score: 261 bits (667), Expect = 1.120e-84
Identity = 127/247 (51.42%), Postives = 169/247 (68.42%), Query Frame = 1
Query:    1 MLIQFLSDVHLEQGAVP-FSDVVTPAADLLIVAGDVAPARHFSLPYFVRHCSEAFEKVLWVYGNHEWYSQ--CESMDEIESHMADLISEYSNVSIMNRDVIEWRGVNFVGCTMWSHVPASAREEAALCVNDYRFVRKEHG-PVSPADTDAFHQRDSAFLSSNSTADSVVITHHAPRTRTTSHPRYAGCSNNCCFATDMNLPAMPKLWIAGHTHFNFDFVDGDTRFVSNMFRNENYRVPFSRCKTIEI 729
            M +Q  SD+HLEQG    +  ++ PAAD+LI+AGDVA A H  +P F+R  SEAFEKVL V GNHE YS     SM E++ H+  ++ E+SNVS++N  V E +GV FVG T+WSH+P   R E + C+NDYR++    G  ++PA T   H+   AFL  +   +SVVITHH P+T  TSHPRYAG   NC F+TD++L  MP+LW++GHTHFN DFV   TRF+SN +RNEN+ +P+S  KT+ I
Sbjct:    1 MQLQIASDLHLEQGCTSNYYSIIKPAADILILAGDVAYATHAQIPPFMRKMSEAFEKVLLVPGNHERYSHDLSMSMTEMDMHLHGVLQEFSNVSLLNNKVEERKGVKFVGSTLWSHIPQQDRYEVSTCINDYRYILDGTGRAITPAYTSGLHRDAVAFLEKHCDTNSVVITHHCPQTTRTSHPRYAGSPTNCAFSTDVSLTQMPQLWVSGHTHFNHDFVKAGTRFISNQYRNENWCMPYSASKTVTI 247          
BLAST of jgi.p|Trimin1|181522 vs. uniprot
Match: A0A835Z6I0_9STRA (Metallo-dependent phosphatase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6I0_9STRA)

HSP 1 Score: 259 bits (663), Expect = 4.260e-84
Identity = 129/246 (52.44%), Postives = 167/246 (67.89%), Query Frame = 1
Query:    1 MLIQFLSDVHLEQG-AVPFSDVVTPAADLLIVAGDVAPARHFSLPYFVRHCSEAFEKVLWVYGNHEWYSQCESMDEIESHMADLISEYSNVSIMNRDVIEWRGVNFVGCTMWSHVPASAREEAALCVNDYRFVRKEHGPVSPADTDAFHQRDSAFLSSNSTADSVVITHHAPRTRTTSHPRYAGCSNNCCFATDMNLPAMPKLWIAGHTHFNFDFVD--GDTRFVSNMFRNENYRVPFSRCKTIEI 729
            M I  +SDVHLE G A PFS +V   AD+L++AGD+A A    LP FV   SE +E+VL+V GNHE+Y    SM E+ + +   +  + NV++++ DV E  GV FVG T+WS VPA +  E + CVNDYRFVR +  P+SP +T   H     FL  +  ADSVVITHH PRTR TSHPRY G S +C FATD++LP MP+LW++GHTHFN DF +  G TRF+SN +RNEN+R+P S   T+EI
Sbjct:    1 MRIHVVSDVHLEYGGAPPFSSLVAAEADVLVLAGDIAAATCPELPDFVARASEIYERVLYVPGNHEYYHSSNSMAEMRACLRAALDPFGNVTLLDDDVAEIGGVKFVGSTLWSRVPADSELEVSRCVNDYRFVRAKCRPISPCETTELHAESVDFLRRHCDADSVVITHHCPRTRKTSHPRYDGSSASCAFATDVSLPRMPRLWVSGHTHFNHDFQEPQGGTRFLSNQYRNENWRLPHSPTMTLEI 246          
BLAST of jgi.p|Trimin1|181522 vs. uniprot
Match: A0A6C0K152_9ZZZZ (Metallophos domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0K152_9ZZZZ)

HSP 1 Score: 137 bits (345), Expect = 3.830e-36
Identity = 80/240 (33.33%), Postives = 128/240 (53.33%), Query Frame = 1
Query:    4 LIQFLSDVHLEQGAVP---FSDVVTPAADLLIVAGDVAPARHFSLPYFVRHCSEAFEKVLWVYGNHEWYSQCESMDEIESHMADLISEYSNVSIMNRDVIEWRGVNFVGCTMWSHVPASAREEAALCVNDYRFVRKEHGPVSPADTDAFHQRDSAFLSSNSTADS----VVITHHAPRTRTTSHPRYAGCSNNCCFATDMN-LPAMPKL--WIAGHTHFNFDFVDGDTRFVSNMFRNENY 693
            L+Q  SD+HL+ G +    FS +V P A +L++AGD+          F+++CSE FE VL+V GNHE+Y    S+ +    + +++ ++SNV  +N +V E+ G+ F+G T+WS +           +ND+R +       SP  ++   + + +F+++  T D     ++ITHHAP  +  S   Y G   NCCFATD+  L   P +  WI GHTH N+  +        N +R  NY
Sbjct:    9 LLQVCSDIHLDYGDISPSEFSKIVEPRAQILVLAGDIGNPFTEIYEQFMQYCSERFECVLYVAGNHEYYKHKHSISQTNHQIYEVLHKFSNVHFLNNNVFEYEGIAFIGTTLWSQIGDEMGPAQLYYMNDFRTING----FSPLVSNYLFKNNLSFITT--TLDKYEVCIIITHHAPSMKCISDD-YLGDKLNCCFATDLEYLFEHPHMMGWIYGHTHHNYKDMGERAFLYGNCYRAPNY 241          
BLAST of jgi.p|Trimin1|181522 vs. uniprot
Match: A0A7Y8KZ44_9BURK (Metallophosphoesterase n=1 Tax=Hydrogenophaga aromaticivorans TaxID=2610898 RepID=A0A7Y8KZ44_9BURK)

HSP 1 Score: 116 bits (291), Expect = 6.070e-28
Identity = 86/243 (35.39%), Postives = 126/243 (51.85%), Query Frame = 1
Query:    1 MLIQFLSDVHLEQGA--VPFSDVVTPA--ADLLIVAGDVAPARHFSLPYFVRHCSEAFEKVLWVYGNHEWYSQCESMDEIESHMADL--ISEYSNVSIMNRDVIEWRGVNFVGCTMWS-------HVPASAREEAALCVNDYRFVRKEHGPV-SPADTDAFHQRDSAFLSSNSTAD----SVVITHHAPRTRTTSHPRYAGCSNNCCFATDMN-LPAMPKLWIAGHTHFNFDFVDGDTRFVSN 672
            M +Q  SD+HLE  A   P   ++ PA  AD+L++AGDVA A + ++  F          VL+V GNHE Y  C     IES + +L   S  ++V  + RDV+++ GV F+GCT+W+              E A L +ND+R +R  +G + SP      H+   A+L    + D    +VV+THHAP   +  HPRYAG   N  FA+D+  L      W+ GH H +F++     R V+N
Sbjct:    1 MKLQLASDLHLEHLARSFPGETLIRPAHQADVLVLAGDVAQASN-AIALF----GNWPVPVLYVLGNHEAYGGC-----IESVIDELRAASRGTSVRFLERDVVDFGGVRFLGCTLWTDYRLRSNRTQRQLMEHAGLRINDHRLIRTRNGELFSPEHALRDHEISRAWLERELSQDYDGKTVVVTHHAPHPLSV-HPRYAGDPTNAAFASDLTELLHKADAWLHGHVHDSFNYKVAGCRVVAN 232          
BLAST of jgi.p|Trimin1|181522 vs. uniprot
Match: A0A2N2TS07_9PROT (Metallophosphoesterase n=1 Tax=Betaproteobacteria bacterium HGW-Betaproteobacteria-16 TaxID=2013707 RepID=A0A2N2TS07_9PROT)

HSP 1 Score: 115 bits (288), Expect = 1.670e-27
Identity = 88/250 (35.20%), Postives = 124/250 (49.60%), Query Frame = 1
Query:    1 MLIQFLSDVHLEQGA--VPFSDVVTPA--ADLLIVAGDVAPARHFSLPYFVRHCSEAFE-------KVLWVYGNHEWYSQC-ES-MDEIESHMADLISEYSNVSIMNRDVIEWRGVNFVGCTMWS-------HVPASAREEAALCVNDYRFVRKEHGPV-SPADTDAFHQRDSAFLSSNST----ADSVVITHHAPRTRTTSHPRYAGCSNNCCFATDMN-LPAMPKLWIAGHTHFNFDFVDGDTRFVSN 672
            M IQ  SD+HLE  A   P   ++ PA  AD+L++AGDV             H SEA          VL+V GNHE Y  C ES +DE+ +   D     ++V ++ RDV ++ GV F+GCT+W+              E A L +ND+R +R   G + SP      H+   A+L    +      +VVITHHAP   +  HPRYAG   N  FA+++  L     +W+ GH H +FD+     R V+N
Sbjct:    1 MRIQLASDLHLEHLARLFPGETLIRPAHQADVLVLAGDVG------------HASEAVALFADWPVPVLYVLGNHEHYGGCLESVLDELRAASRD-----TSVRVLERDVADFGGVRFLGCTLWTDYRLRSNRTQRQLMENARLRINDHRLIRTRSGELFSPEHALRDHEVSRAWLEQELSEVYDGTTVVITHHAPHPLSV-HPRYAGDPANAAFASELTELVQRADIWLHGHVHDSFDYRVAGCRVVAN 232          
BLAST of jgi.p|Trimin1|181522 vs. uniprot
Match: A0A481Z6W4_9VIRU (Calcineurin-like phosphoesterase n=1 Tax=Pithovirus LCPAC302 TaxID=2506593 RepID=A0A481Z6W4_9VIRU)

HSP 1 Score: 110 bits (275), Expect = 1.010e-25
Identity = 72/257 (28.02%), Postives = 122/257 (47.47%), Query Frame = 1
Query:    1 MLIQFLSDVHLE-QGAVPFSDVVTPAADLLIVAGDVAPARHFSLPYFVRHCSEAFEKVLWVYGNHEWYSQCESMDEIESHMADLISEYSNVSIMNRDVIEWRGVNFVGCTMWSHVPASAREEAALCVNDYRFVRKEHGP------VSPADTDAFHQRDSAFLSS-----NSTADSVVITHHAPR-TRTTSHPRYAGCSNNCCFATDMNLPAMPKLWIAGHTHFNFDFVDGDTRFVSNMFRNENYRVP-FSRCKTIEI 729
            M +QF+SD+HLE +  +P  + V P    L + GD+      +   F+ H S+ FE +L + GNHE+YS   +M ++E+ +  +   + NV+ +N D I      F+GCT+WS   ++  E+A   +NDY+++  +HG       + P +    H+    ++       N   D +V+THH P  +    +  Y+ C  + C   +  L    K WI+GHTH        D   +SN        +  F+  K I+ 
Sbjct:    1 MKLQFVSDIHLELRSYIPVIEPVEPGNTYLALCGDIGNPCFKNYKDFLSHHSKTFEHILIISGNHEYYSDSNTMSDMENKIRSICDLFKNVTYLNTDKIIIGRTKFIGCTLWSDT-SNICEKAKGAMNDYKYIYVKHGKFKKTRKIKPLEISKIHRYMRFWIEKEIKLDNRYDDIIVLTHHPPSFSMLDINDVYSPCYGSNC---EYLLKEPVKYWISGHTHSCKSVEINDINLLSNCMGYPRQNIKGFNENKYIDF 253          
BLAST of jgi.p|Trimin1|181522 vs. uniprot
Match: A0A1W6MG32_9FLAO (Metallophos domain-containing protein n=2 Tax=Nonlabens spongiae TaxID=331648 RepID=A0A1W6MG32_9FLAO)

HSP 1 Score: 110 bits (274), Expect = 1.270e-25
Identity = 74/238 (31.09%), Postives = 128/238 (53.78%), Query Frame = 1
Query:    1 MLIQFLSDVHLEQGAVPF---SDVVTPAADLLIVAGDVAPA---RHFSLPYFVRHCSEAFEKVLWVYGNHEWYSQCESMDEIESHMADLISEY-SNVSIMNRDVIEWRGVNFVGCTMWSHVPASAREEAALCVNDYRFVRKEHGPVSPADTDAFHQRDSAFLSSNSTADS-VVITHHAPRTRTTSHP-RYAGCSNNCCFATDMNL---PAMPKLWIAGHTHFNFD-FVDGDTRFVSNM 675
            M+ Q+LSD+H EQ A      ++ + P AD L++AGD+ P    + FS   F+ + S  ++ V+W+ GNHE+YS      ++  ++  ++ +  +N+ + +R VI+  G+N +GCT+WS++  + +      + D+  +  ++  +   D +  H+ D  FL  N   DS +VITHH P  +  ++P +Y G   N  FA++ NL    +    WI GH H N D F   +T  V+N 
Sbjct:    1 MVFQYLSDIHYEQPANRAYLKNNPLRPIADTLLIAGDLMPLNCMKRFS--DFLDYLSSNWKSVIWIPGNHEFYSS-----DLSVYLNPILEKIRNNIHLCHRSVIKVGGLNILGCTLWSYIDKAHQFPIKRYLQDFSKIHWKNRKLDIDDYNIMHELDLKFLEKNRLDDSSIVITHHVPTLQ--NYPEKYKGSILNQAFASENNLLIKDSQVPYWIYGHHHANTDPFKINNTTVVTNQ 229          
BLAST of jgi.p|Trimin1|181522 vs. uniprot
Match: A0A515D7S0_9BURK (Metallophosphoesterase n=1 Tax=Rhodoferax sediminis TaxID=2509614 RepID=A0A515D7S0_9BURK)

HSP 1 Score: 109 bits (273), Expect = 2.520e-25
Identity = 75/241 (31.12%), Postives = 125/241 (51.87%), Query Frame = 1
Query:    1 MLIQFLSDVHLE--QGAVPFSDVVTPA--ADLLIVAGDVAPARHFSLPYFVRHCSEAFEKVLWVYGNHEWYSQCESMDEIESHMADLISEYSNVSIMNRDVIEWRGVNFVGCTMWS-------HVPASAREEAALCVNDYRFVRKEHGPVSPADTDAFHQRDSAFLSSNST----ADSVVITHHAPRTRTTSHPRYAGCSNNCCFATDMN--LPAMPKLWIAGHTHFNFDFVDGDTRFVSN 672
            M +Q  SD+HLE  Q   P   V+ PA  ADLL++AGD+A     ++  F    ++    VL++ GNHE+Y   ES+  +   +    +  +N+  ++ D +EW GV F+GCT+W+       ++ +         +ND+  ++ + G  + A     H++  A+L           +VV+THH P   +  HPRY G + N  F +D++  +P +  LW+ GH H +FD+  GD R V+N
Sbjct:    1 MKLQIASDLHLEFLQKRWPGERVIAPATGADLLVLAGDIANGTQ-AIDLF----ADWPVPVLYLAGNHEFYG--ESLHSVRQDLRKAAAG-TNIHFLDNDRLEWGGVRFLGCTLWTDYRLDNRYLQSDLMGRCERALNDHWCIKMQEGAFTAARALQEHEQSRAWLERELARPFAGPTVVVTHHGPHPGSV-HPRYRGDAVNAAFVSDLSSLMPGV-DLWLHGHVHDSFDYRVGDCRVVAN 231          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|181522 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z038_9STRA8.910e-185100.00Metallo-dependent phosphatase-like protein n=1 Tax... [more]
A0A835YX12_9STRA2.470e-15691.77Metallophos domain-containing protein n=1 Tax=Trib... [more]
A0A835Z861_9STRA1.120e-8451.42Metallo-dependent phosphatase-like protein n=2 Tax... [more]
A0A835Z6I0_9STRA4.260e-8452.44Metallo-dependent phosphatase-like protein n=1 Tax... [more]
A0A6C0K152_9ZZZZ3.830e-3633.33Metallophos domain-containing protein n=1 Tax=vira... [more]
A0A7Y8KZ44_9BURK6.070e-2835.39Metallophosphoesterase n=1 Tax=Hydrogenophaga arom... [more]
A0A2N2TS07_9PROT1.670e-2735.20Metallophosphoesterase n=1 Tax=Betaproteobacteria ... [more]
A0A481Z6W4_9VIRU1.010e-2528.02Calcineurin-like phosphoesterase n=1 Tax=Pithoviru... [more]
A0A1W6MG32_9FLAO1.270e-2531.09Metallophos domain-containing protein n=2 Tax=Nonl... [more]
A0A515D7S0_9BURK2.520e-2531.12Metallophosphoesterase n=1 Tax=Rhodoferax sedimini... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_261contigContig_261:86685..87416 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|181522|e_gw1.261.23.1
DescriptionCalcineurin-like phosphoesterase superfamily domain
COG categoryS
Max annot lvl1236|Gammaproteobacteria
EggNOG OGsCOG1409@1|root,COG1409@2|Bacteria,1R4AZ@1224|Proteobacteria,1S5VS@1236|Gammaproteobacteria,3NKSU@468|Moraxellaceae
Evalue4.46e-24
Seed ortholog349106.PsycPRwf_0945
Hectar predicted targeting categoryother localisation
TranscriptId181844
TrackFilteredModels1
ProteinId181522
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|181522gene_16300Tribonema minus UTEX_B_3156 geneContig_261 86685..87416 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_16300_1exon_16300_1Tribonema minus UTEX_B_3156 exonContig_261 86685..87416 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_16300CDS_16300Tribonema minus UTEX_B_3156 CDSContig_261 86685..87416 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|181522Trimin1|181522|e_gw1.261.23.1Tribonema minus UTEX_B_3156 polypeptideContig_261 86685..87416 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_16300 ID=mRNA_16300|Name=jgi.p|Trimin1|181522|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=732bp|location=Sequence derived from alignment at Contig_261:86685..87416- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCTCATTCAGTTTCTCTCCGATGTACATCTGGAGCAAGGGGCTGTCCC
TTTCTCAGATGTCGTCACGCCCGCGGCAGATCTCCTCATCGTGGCCGGCG
ATGTCGCACCCGCACGCCACTTCTCCCTTCCCTACTTTGTTCGCCACTGC
TCGGAGGCATTTGAAAAGGTTTTGTGGGTGTACGGCAACCACGAGTGGTA
CAGTCAATGCGAAAGCATGGATGAAATCGAAAGTCATATGGCCGATCTTA
TCAGCGAGTACTCTAATGTGAGTATCATGAACCGTGACGTCATCGAGTGG
CGAGGCGTCAATTTCGTCGGTTGCACCATGTGGAGCCACGTCCCCGCGAG
CGCGCGTGAGGAAGCCGCGCTCTGCGTCAACGACTACCGTTTCGTGCGTA
AGGAGCATGGACCTGTGTCGCCGGCCGACACCGATGCATTCCATCAGAGG
GACTCGGCATTTCTCAGCTCGAACAGCACTGCGGATTCGGTCGTCATCAC
GCACCACGCGCCTCGTACGCGAACGACTTCACACCCACGGTACGCCGGAT
GCAGCAACAACTGCTGTTTCGCCACCGACATGAACTTGCCGGCAATGCCA
AAGCTGTGGATCGCAGGGCACACGCATTTCAACTTTGACTTTGTCGACGG
CGACACGCGATTCGTGAGCAACATGTTTCGCAACGAAAACTACCGTGTCC
CTTTTTCTCGCTGCAAAACCATTGAAATTTAA
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protein sequence of jgi.p|Trimin1|181522

>Trimin1|181522|e_gw1.261.23.1 ID=Trimin1|181522|e_gw1.261.23.1|Name=jgi.p|Trimin1|181522|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=244bp
MLIQFLSDVHLEQGAVPFSDVVTPAADLLIVAGDVAPARHFSLPYFVRHC
SEAFEKVLWVYGNHEWYSQCESMDEIESHMADLISEYSNVSIMNRDVIEW
RGVNFVGCTMWSHVPASAREEAALCVNDYRFVRKEHGPVSPADTDAFHQR
DSAFLSSNSTADSVVITHHAPRTRTTSHPRYAGCSNNCCFATDMNLPAMP
KLWIAGHTHFNFDFVDGDTRFVSNMFRNENYRVPFSRCKTIEI*
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mRNA from alignment at Contig_261:86685..87416-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_16300 ID=mRNA_16300|Name=jgi.p|Trimin1|181522|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=732bp|location=Sequence derived from alignment at Contig_261:86685..87416- (Tribonema minus UTEX_B_3156 )
ATGCTCATTCAGTTTCTCTCCGATGTACATCTGGAGCAAGGGGCTGTCCC TTTCTCAGATGTCGTCACGCCCGCGGCAGATCTCCTCATCGTGGCCGGCG ATGTCGCACCCGCACGCCACTTCTCCCTTCCCTACTTTGTTCGCCACTGC TCGGAGGCATTTGAAAAGGTTTTGTGGGTGTACGGCAACCACGAGTGGTA CAGTCAATGCGAAAGCATGGATGAAATCGAAAGTCATATGGCCGATCTTA TCAGCGAGTACTCTAATGTGAGTATCATGAACCGTGACGTCATCGAGTGG CGAGGCGTCAATTTCGTCGGTTGCACCATGTGGAGCCACGTCCCCGCGAG CGCGCGTGAGGAAGCCGCGCTCTGCGTCAACGACTACCGTTTCGTGCGTA AGGAGCATGGACCTGTGTCGCCGGCCGACACCGATGCATTCCATCAGAGG GACTCGGCATTTCTCAGCTCGAACAGCACTGCGGATTCGGTCGTCATCAC GCACCACGCGCCTCGTACGCGAACGACTTCACACCCACGGTACGCCGGAT GCAGCAACAACTGCTGTTTCGCCACCGACATGAACTTGCCGGCAATGCCA AAGCTGTGGATCGCAGGGCACACGCATTTCAACTTTGACTTTGTCGACGG CGACACGCGATTCGTGAGCAACATGTTTCGCAACGAAAACTACCGTGTCC CTTTTTCTCGCTGCAAAACCATTGAAATTTAA
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Coding sequence (CDS) from alignment at Contig_261:86685..87416-

>mRNA_16300 ID=mRNA_16300|Name=jgi.p|Trimin1|181522|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=732bp|location=Sequence derived from alignment at Contig_261:86685..87416- (Tribonema minus UTEX_B_3156 )
ATGCTCATTCAGTTTCTCTCCGATGTACATCTGGAGCAAGGGGCTGTCCC
TTTCTCAGATGTCGTCACGCCCGCGGCAGATCTCCTCATCGTGGCCGGCG
ATGTCGCACCCGCACGCCACTTCTCCCTTCCCTACTTTGTTCGCCACTGC
TCGGAGGCATTTGAAAAGGTTTTGTGGGTGTACGGCAACCACGAGTGGTA
CAGTCAATGCGAAAGCATGGATGAAATCGAAAGTCATATGGCCGATCTTA
TCAGCGAGTACTCTAATGTGAGTATCATGAACCGTGACGTCATCGAGTGG
CGAGGCGTCAATTTCGTCGGTTGCACCATGTGGAGCCACGTCCCCGCGAG
CGCGCGTGAGGAAGCCGCGCTCTGCGTCAACGACTACCGTTTCGTGCGTA
AGGAGCATGGACCTGTGTCGCCGGCCGACACCGATGCATTCCATCAGAGG
GACTCGGCATTTCTCAGCTCGAACAGCACTGCGGATTCGGTCGTCATCAC
GCACCACGCGCCTCGTACGCGAACGACTTCACACCCACGGTACGCCGGAT
GCAGCAACAACTGCTGTTTCGCCACCGACATGAACTTGCCGGCAATGCCA
AAGCTGTGGATCGCAGGGCACACGCATTTCAACTTTGACTTTGTCGACGG
CGACACGCGATTCGTGAGCAACATGTTTCGCAACGAAAACTACCGTGTCC
CTTTTTCTCGCTGCAAAACCATTGAAATTTAA
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