mRNA_1971 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|163519
Unique NamemRNA_1971
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|163519 vs. uniprot
Match: A0A835Z314_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z314_9STRA)

HSP 1 Score: 742 bits (1916), Expect = 1.620e-269
Identity = 406/406 (100.00%), Postives = 406/406 (100.00%), Query Frame = 1
Query:    1 MACTSKKRAAVSAPTWGSTLGRWVCLETSGEGPCPRSGHHVVQSGNTAFLFGGCGHTELDKLAALNDAYSFNLETHQWQLVKVNSEPPTARSSFSMCAPPDGSRSIFVAGGTGADPDSLCHDIVEFDTHARTWSRVVDVGDTPWILYGQSQCAYGGSLILFGGTSGLEYVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAFMPQYSVVDVYCLNLITLVWKAVNTSGEAPQSRVAHTCSFDGATDTILMWGGFSSTLHRLQDFHILHCSTATWTTETSNQPPPRAFHAACFHKGALYLFCGADGDNRYNDVWRYTVRESPPSLGVLAARQLRATEGDDEKPVKPRKNHLSDNAATASRKCISQSAGNSVQLPAEVASALCGFNKYATSLSV 1218
            MACTSKKRAAVSAPTWGSTLGRWVCLETSGEGPCPRSGHHVVQSGNTAFLFGGCGHTELDKLAALNDAYSFNLETHQWQLVKVNSEPPTARSSFSMCAPPDGSRSIFVAGGTGADPDSLCHDIVEFDTHARTWSRVVDVGDTPWILYGQSQCAYGGSLILFGGTSGLEYVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAFMPQYSVVDVYCLNLITLVWKAVNTSGEAPQSRVAHTCSFDGATDTILMWGGFSSTLHRLQDFHILHCSTATWTTETSNQPPPRAFHAACFHKGALYLFCGADGDNRYNDVWRYTVRESPPSLGVLAARQLRATEGDDEKPVKPRKNHLSDNAATASRKCISQSAGNSVQLPAEVASALCGFNKYATSLSV
Sbjct:    1 MACTSKKRAAVSAPTWGSTLGRWVCLETSGEGPCPRSGHHVVQSGNTAFLFGGCGHTELDKLAALNDAYSFNLETHQWQLVKVNSEPPTARSSFSMCAPPDGSRSIFVAGGTGADPDSLCHDIVEFDTHARTWSRVVDVGDTPWILYGQSQCAYGGSLILFGGTSGLEYVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAFMPQYSVVDVYCLNLITLVWKAVNTSGEAPQSRVAHTCSFDGATDTILMWGGFSSTLHRLQDFHILHCSTATWTTETSNQPPPRAFHAACFHKGALYLFCGADGDNRYNDVWRYTVRESPPSLGVLAARQLRATEGDDEKPVKPRKNHLSDNAATASRKCISQSAGNSVQLPAEVASALCGFNKYATSLSV 406          
BLAST of jgi.p|Trimin1|163519 vs. uniprot
Match: A0A836CEB6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEB6_9STRA)

HSP 1 Score: 351 bits (900), Expect = 4.580e-115
Identity = 184/365 (50.41%), Postives = 217/365 (59.45%), Query Frame = 1
Query:   13 SKKRAAVSAPTWGSTLGRWVCLETSGEGPCPRSGHHVVQSGNTAFLFGGCGHTELDKLAALNDAYSFNLETHQWQLVKVNSEPPTARSSFSMCAPPDGSRSIFVAGGTGADPDSLCHDIVEFDTHARTWSRVV-DVGDTPWILYGQSQCAYGGSLILFGGTSGLEYVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAFMPQYSVVDVYCLNLITLVWKAVNTSGEAPQSRVAHTCSFDGATDTILMWGGFSSTLHRLQDFHILHCSTATWTTETS--------------------NQPPPRAFHAACFHKGALYLFCGADGDNRYNDVWRYTVRESPPSLGVLAARQLRA 1044
            S+KR A  A  W  TLGRWVCL+TSG+GP PRSGH VV  G  A+LFGGCG    D++A LND Y+F+L+THQW  V VN EPP  R+SF MCA P   RSI VAGGTG + DSL  DIVEFDT  R W RVV D  +TP   YGQS C YG SL+LFGG++G+ Y N                                          G F P+ S +DV+ L+L TL W  V TSG+ P+SRVAH+C +D  T TI +WGGF+S L RLQDF+ LHC TATW    +                      PP RAFHAACF + ALY+F GA+GD RY+DVWRY    SPPSLGVLAAR +RA
Sbjct:    4 SRKRPAHVA--WEDTLGRWVCLQTSGQGPSPRSGHDVVVIGRKAYLFGGCGGESNDQIACLNDVYTFDLDTHQWNAVAVNGEPPLPRASFGMCARPSPHRSIVVAGGTGVEMDSLRADIVEFDTRTRAWRRVVTDSEETPCRFYGQSLCTYGESLLLFGGSTGMHYTNDLYEYNTTTQRWRKLTTTGRKPTPRYKHQAVIVGASMYVIGGGCFKPEQSTIDVHRLDLATLAWDEVATSGDVPKSRVAHSCCYDAGTGTIFLWGGFTSELSRLQDFYTLHCETATWRAAAALAPAVVSGVVXXXXXXXXXXXLPPARAFHAACFFEDALYVFSGANGDVRYSDVWRYQACASPPSLGVLAARLVRA 366          
BLAST of jgi.p|Trimin1|163519 vs. uniprot
Match: D7FP90_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP90_ECTSI)

HSP 1 Score: 298 bits (764), Expect = 1.250e-94
Identity = 152/343 (44.31%), Postives = 200/343 (58.31%), Query Frame = 1
Query:   64 RWVCLETSGEGPCPRSGHHVVQSGNTAFLFGGCGHTELDKLAALNDAYSFNLETHQWQLVKVNSEPPTARSSFSMCAPPDGSRSIFVAGGTGADPDSLCHDIVEFDTHARTWSRVV-DVGDTPWILYGQSQCAYGGSLILFGGTSGLEYVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAFMPQYSVVDVYCLNLITLVWKAVNTSGEAPQSRVAHTCSFDGATDTILMWGGFSSTLHRLQDFHILHCSTATWT---------------TETSNQPPPRAFHAACFHKGALYLFCGADGDNRYNDVWRYTVRESPPSLGVLAARQLRA 1044
            +W  L TSG+ P PRSGH VV  G+ A+LFGGCG  E D++  LND Y FNLE H+W  V V  + P  R+SF MCA P    ++ VAGGTG + DSL  D+VE++   RTW++++ D  +TP   YGQS C YG +L+LFGG++GL Y N                                          G F P+ S +D+YCL+L +LVW+     GE P++RVAH+CSFD  TDTI +WGGF+S L RLQDF   HC TATW                T+    PP RAFH+A F +G LY+F GA+GD RY+DVWR+ VR +PPSL +L A ++++
Sbjct:   36 QWTKLNTSGDSPSPRSGHDVVVIGHKAYLFGGCG-GEQDQITCLNDVYVFNLELHRWSKVTVKGDAPLPRASFGMCAGP-APGTLIVAGGTGVEMDSLRADVVEYNVPNRTWTQILTDSEETPCKFYGQSVCTYGDNLLLFGGSTGLHYTNDLFEYNVRTNKWKRLVTSGRMPSPRYKHQAVVVGHKMYVIGGGCFKPEQSGIDLYCLDLRSLVWEETTMKGELPKARVAHSCSFDAETDTIYLWGGFTSELSRLQDFFGFHCPTATWVRMAEEPTQAPVAGGATDLVGAPPARAFHSAAFFQGGLYVFSGANGDVRYSDVWRFQVRSTPPSLSMLVAHKIKS 376          
BLAST of jgi.p|Trimin1|163519 vs. uniprot
Match: D7FP81_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP81_ECTSI)

HSP 1 Score: 291 bits (745), Expect = 6.210e-92
Identity = 153/336 (45.54%), Postives = 197/336 (58.63%), Query Frame = 1
Query:   52 STLGRWVCLETSGEGPCPRSGHHVVQSGNTAFLFGGCGHTELDKLAALNDAYSFNLETHQWQLVKVNSEPPTARSSFSMCAPPDGSRSIFVAGGTGADPDSLCHDIVEFDTHARTWSRVV-DVGDTPWILYGQSQCAYGGSLILFGGTSGLEYVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAFMPQYSVVDVYCLNLITLVWKAVNTS--GEAPQSRVAHTCSFDGATDTILMWGGFSSTLHRLQDFHILHCSTATWTTETSN----QPPPRAFHAACFHKGALYLFCGADGDNRYNDVWRYTVRESPPSLGVLAARQL 1038
            +T+GRWV L+TSG  P PRSGH V   GN A+LFGGCG  E D++  LND Y F+L+ H+W+      +   AR+SF MC  P    ++ VAGGTG + DSL  D+VE++T  RTW+ V+ D  +TP   YGQS C YG +L+LFGG++GL Y N                                          G F P+ S +D+YCL+L TLVW+   T   G+ P++RVAH+CSFD     I +WGGF+  L RL DF++ +C +A W           PP RAFH+A FH GALYLF GA+GD RYNDVWRY VR SPPSL VLA++ L
Sbjct:   27 TTMGRWVRLQTSGRPPSPRSGHDVAVIGNKAYLFGGCGGDE-DQITCLNDMYVFDLQLHRWERAVPKGDSIHARASFGMCQGPTPG-TVIVAGGTGVEMDSLRADVVEYNTRTRTWTSVLTDSEETPCKFYGQSVCTYGDNLLLFGGSTGLHYSNDLFEYNVCSNRWRKLTTTGRKPSPRYKHQAVAVGDKMYVIGGGCFKPEQSSIDLYCLDLKTLVWEMDETEMKGDLPKARVAHSCSFDPVGGDIYLWGGFTGELSRLADFYVYNCKSACWRRLVMEGGDASPPARAFHSAVFHDGALYLFSGANGDIRYNDVWRYQVRGSPPSLAVLASKVL 360          
BLAST of jgi.p|Trimin1|163519 vs. uniprot
Match: A0A835ZFC9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFC9_9STRA)

HSP 1 Score: 285 bits (729), Expect = 3.050e-89
Identity = 155/352 (44.03%), Postives = 195/352 (55.40%), Query Frame = 1
Query:   64 RWVCLETSGEGPCPRSGHHVVQSGNTAFLFGGCGHTELDKLAALNDAYSFNLETHQWQLVKVNSEP-PTARSSFSMCAPPDGSRSIFVAGGTGADPDSLCHDIVEFDTHARTWSRVV-DVGDTPWILYGQSQCAYGGSLILFGGTSGLEYVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAFMPQYSVVDVYCLNLITLVWKAVNTSGEAPQSRVAHTCSFDGATDTILMWGGFSSTLHRLQDFHILHCSTATWTTETSNQPPP-------------------------RAFHAACFHKGALYLFCGADGDNRYNDVWRYTVRESPPSLGVLAARQL 1038
            RWV L+  G  P PRSGH V   GN  +LFGGCG  E D +  LND Y+F+L+ H W+L+    E  PTAR+SF+MC+ PD  +++ VAGGTG + DSL  DI++FDT  R W ++  D  D P   YGQ+ C YG  L+LFGG++GL Y N                                          G F P+ S +D+YCLNL TLVW    ++G  P++RVAH+CSFD  T TI +WGGF+  L RLQDF+  H  T  WT E    PP                          RAFH+A F+KGALY+F GA+GD RYNDVWRY +R SPP+LGVLA R L
Sbjct:   34 RWVKLQVCGTVPSPRSGHDVAVVGNKLYLFGGCG-GENDAINCLNDMYTFDLDRHVWELIPHRGEEMPTARASFAMCSGPD-EKTLIVAGGTGVEMDSLRSDILQFDTRTRRWIKLHRDGDDAPSKFYGQTVCRYGDVLLLFGGSTGLHYTNDLFEYNVVTNCWRKLVTQGRRPSPRYKHQAVVVGDFMYVIGGGCFKPEQSAIDMYCLNLRTLVWAQPRSAGAVPRARVAHSCSFDPETCTIYLWGGFTGELSRLQDFYAYHAPTGEWT-EIRTAPPXXXXXXXXXXXXXXXXXXXXXVAPYARAFHSAVFYKGALYVFSGANGDVRYNDVWRYRMRSSPPALGVLAGRAL 382          
BLAST of jgi.p|Trimin1|163519 vs. uniprot
Match: A0A836CQE2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQE2_9STRA)

HSP 1 Score: 280 bits (717), Expect = 1.390e-87
Identity = 155/364 (42.58%), Postives = 202/364 (55.49%), Query Frame = 1
Query:    7 CTSKKRAAVSAPTWGSTLGRWVCLETSGEGPCPRSGHHVVQSGNTAFLFGGCGHTELDKLAALNDAYSFNLETHQWQLVKVNSEP-PTARSSFSMCAPPDGSRSIFVAGGTGADPDSLCHDIVEFDTHARTWSRVVDVG-DTPWILYGQSQCAYGGSLILFGGTSGLEYVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAFMPQYSVVDVYCLNLITLVWKAVNTSGEAPQSRVAHTCSFDGATDTILMWGGFSSTLHRLQDFHILHCSTATWT---TETSNQPPP---------------RAFHAACFHKGALYLFCGADGDNRYNDVWRYTVRESPPSLGVLAARQL 1038
            C SKK  A ++        +WV L+TSG  P PRSGH V   G+  +LFGGCG  E D +  LND Y+F+L++H+W+ V    +  P+AR+SF MCA P  + +I VAGGTG + DSL  D++EFDT  + WS++   G D P   YGQ+ C YG  L+LFGG++GL Y N                                          G F P+ + +D+Y L+L TLVW      GE P++RVAH+CSFD AT TI +WGGF+  L RLQDF     + A W    T  ++   P               RAFH+A FH GALY+F GA+GD RYNDVWR+ VR +PP+LGVLAAR L
Sbjct:   10 CKSKKAVAKASLPRRQEHQQWVKLQTSGTVPSPRSGHDVAVVGSKVYLFGGCG-GENDAINCLNDMYTFDLDSHRWETVTAKGDSVPSARASFGMCAGP-AANTIIVAGGTGVEMDSLRSDVLEFDTRTKLWSKITGDGEDAPSRFYGQTVCRYGSVLLLFGGSTGLHYTNDLFEYNMTTNCWRKLATTGKRPSPRYKHQAVVVGDAMYVIGGGCFKPEQAAIDLYRLDLRTLVWDTPAMGGEVPRARVAHSCSFDPATSTIYLWGGFTGELSRLQDFFAYDTARAEWAEIKTPPADAAAPSAXXXXXXXXXXPYARAFHSAVFHDGALYVFSGANGDVRYNDVWRFKVRSTPPALGVLAARAL 371          
BLAST of jgi.p|Trimin1|163519 vs. uniprot
Match: A0A7S2XVZ9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVZ9_9STRA)

HSP 1 Score: 221 bits (564), Expect = 8.730e-65
Identity = 128/343 (37.32%), Postives = 173/343 (50.44%), Query Frame = 1
Query:   58 LGRWVCLETSGEGPCPRSGHHVVQSGNTAFLFGGCGHTELDKLAALNDAYSFNLETHQWQLVKVNSEPPTARSSFSMCAPPDGSRSIFVAGGTGADPDSLCHDIVEFDTHARTWSRVVDVGDTPWI-LYGQSQCAYGGSLILFGGTSGLEYVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAFMPQYSVVDVYCLNLITLVWKAVNTSGEAPQSRVAHTCSFDGATDTILMWGGFSSTLHRLQDFHILHCSTATWTTETS--NQPP-PRAFHAACFHKGALYLFCGADGDNRYNDVWRYTVRESPPSL-----GVLAARQLRATEGDD 1059
            L  W  +  +G     RSGH +V   +  +LFGGCG   +++ + L+D   F+  T  W  V+   EPP AR+SF M   PD   ++ VAGGTG D D+   DI E++  + TW  ++      +   YGQS C Y G+L  FGG+ G  Y N                                          G + P    +DV+ L+L+TL W    TSG  PQ RVAHTC++D  T  I +WGGF+  LHRL DFH+L  +T  W+T  S  NQ P PRAFH +C H G+ Y+F GADGD R++DVWR+    +PPSL     G +A  Q   T  D+
Sbjct:   30 LKTWQKVPCAGTITGGRSGHGMVVYQSKVYLFGGCGGESVEERSCLSDFLVFDFSTQSWSAVQTRGEPPHARASFGMSRGPDPG-TLIVAGGTGQDMDTFS-DIYEYNISSSTWRLLIKGEKANFCKYYGQSICEYKGNLFFFGGSRGRTYSNVLYRYDCAQEEGAAVPTTGKAPCPRYKQQMMVVKDSLLVIGGGNYRPPTHQIDVHELDLLTLNWSQWKTSGNVPQGRVAHTCTYDENTHQIYLWGGFNVVLHRLNDFHVLDIATRKWSTIISLDNQSPRPRAFHCSCLHDGSFYIFGGADGDFRHSDVWRFRTNVTPPSLMSICAGTVAKSQSPKTAADE 370          
BLAST of jgi.p|Trimin1|163519 vs. uniprot
Match: A0A7S3XN17_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XN17_HETAK)

HSP 1 Score: 214 bits (544), Expect = 4.160e-61
Identity = 128/340 (37.65%), Postives = 172/340 (50.59%), Query Frame = 1
Query:   58 LGRWVCLETSGEGPCPRSGHHVVQSGNTAFLFGGCGHTELDKLAALNDAYSFNLETHQWQLVKVNSEPPTARSSFSMCAPPDGSRSIFVAGGTGADPDSLC-HDIVEFDTHARTWSRVV--DVGDTPWILYGQSQCAYGGSLILFGG-TSGLEYVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAFMPQYSVVDVYCLNLITLVWKAVNTSGEA-PQSRVAHTCSFDGATDTILMWGGFSSTLHRLQDFHILHCSTATWTTET--------SNQPPPRAFHAACFHKGALYLFCGADGDNRYNDVWRYTVRESPPSLGVLAARQL 1038
            L  W  L   G+ PC RSGH VV  G+T +LFGG G +E   LA +N   SF+LET +W  +K + + P  R++F+MC   D   SIF+ GGT  D   L   ++ +F  HAR W RVV  + G      +G+S  AY  SL+ FGG   G  + N                                          G ++P    +D +CL+L T+VW  +  SG A P+ R AHTC +D     + MWGGF+ +L  LQD H L  +T  WT            N PP R+FHAACFH+G+LY F G+DG+ RY+DV RY +R +P  L  LAAR +
Sbjct:   97 LNVWKTLHQVGQVPCERSGHAVVLVGSTVYLFGGYGGSEPVHLADIN---SFDLETRRWNRIKDSGDVPCPRTAFAMCW--DKQDSIFLWGGTDHDLQGLADQEVYQFHIHARKWERVVTRNRGILNLRYFGRSATAYKNSLLFFGGGVKGGRFTNELLQLDLDTMVWSRLETTGEAPCARYKHQALLVQDKLYIVGGGCYLPPTEEIDAFCLDLRTMVWAKLAMSGAALPEGRAAHTCEYDPVGHALYMWGGFNKSLVPLQDLHRLDLATGAWTALCRNAKEGGGGNAPPCRSFHAACFHRGSLYSFNGSDGERRYDDVARYQLRRAPARLAQLAARSV 431          
BLAST of jgi.p|Trimin1|163519 vs. uniprot
Match: A0A7S2V4S9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4S9_9STRA)

HSP 1 Score: 207 bits (526), Expect = 3.230e-59
Identity = 132/351 (37.61%), Postives = 185/351 (52.71%), Query Frame = 1
Query:   13 SKKRAAVSAPTWGSTLGRWVCLETSGEGPCPRSGHHVVQSGNTAFLFGGCGHTELDKLAALNDAYSFNLETHQWQLVKVNSEPPTARSSFSMCAPPDGSRSIFVAGGTGADPDSLCHDIVEFDTHARTWSRVVDVGDTPWILYGQSQCAYGGSLILFGGTSGLEYVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAFMPQYSVVDVYCLNLITLVWKAVNTSGEAPQSRVAHTCSFDGATDTILMWGGFSSTLHRLQDFHILHCSTATWTT-------------ETSNQPPPRAFHAACFHKGALYLFCGADGDNRYNDVWRYTVRESPPSLGVLA 1026
            +K+ +A SAP   + L  W  ++  GE P  RSGH +   G+  ++FGGCG    D  A + D    +++T  WQ V+ + E P+ R+SF+M   P+ S SI V+GGTG   D LC D+ EF+     W R++  G+     YGQS C +   +  FGG+ G +Y N  XXXXXXXXXX                              G + P    +DVY LN+IT+ W  V+T+G  P+ RVAH   +D  ++ I +WGGF+STLHRL DF  L   +  W               +  + P PRAFH A F+  ++Y+F GADG NR+ D+W+Y +R SP SL  LA
Sbjct:    9 AKRDSATSAPEDNNKLNCWKVVKFQGEHPGARSGHGLAIIGHYLYIFGGCG-GPTDGGACMADFMRMDMKTLTWQNVRSHGENPSPRASFAMVGVPERS-SIIVSGGTG--DDLLCDDLFEFNIPTGHWCRILSDGNNFAKYYGQSVCVFRSHVYFFGGSKGTQYTNQLXXXXXXXXXXSEVQTRGTVPDARYKHQALMVGSNMFVIGGGNYRPVNENLDVYKLNMITMEWSCVHTTGCIPKGRVAHVAEYDRLSNKIYVWGGFTSTLHRLHDFFSLALDSMEWECLSEKNGWMEKNDRQMKSGPCPRAFHGAFFYDSSMYIFGGADGQNRHEDMWKYQLRCSPLSLLDLA 355          
BLAST of jgi.p|Trimin1|163519 vs. uniprot
Match: A0A7S2UXP7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXP7_9STRA)

HSP 1 Score: 201 bits (512), Expect = 2.080e-57
Identity = 121/339 (35.69%), Postives = 173/339 (51.03%), Query Frame = 1
Query:   64 RWVCLETSGEGPCPRSGHHVVQSGNTAFLFGGCGHTELDKLAALNDAYSFNLETHQWQLVKVNSEPPTARSSFSMCAPPDGSRSIFVAGGTGADPDSLCHDIVEFDTHARTWSRVV----DVGDTPWILYGQSQCAYGGSLILFGGTSGLEYVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAFMPQYSVVDVYCLNLITLVWKAVNTSGEAPQSRVAHTCSFDGATDTILMWGGFSSTLHRLQDFHILHCSTATWTTETSNQ-----PPPRAFHAACFHKGALYLFCGADGDNRYNDVWRYTVRESPPSLGVLAARQLRATEG 1053
            +W  L+ +      R  H VV  G  A++FGGC    +  +A   D   F+ +  +   +K   E P+ R+SF+MC  PD   ++ +AGGTG D      DI E+++ +R W+R+      +  T   LYGQS C YG SLI FGG+SG  Y N                                          G ++P    +DV+CL+  TL W  VN  G+ PQ+RVAHT   D  ++ I +WGGF+++L+RLQDF      T+TWT    N+     P PRAFHA+C +   +++F GA+ +NRY+DVW+Y VR +P SL VLA R   +T G
Sbjct:    3 QWKRLKCNVNEISARCDHGVVVLGPYAYIFGGCT-GPVSSMACSPDLICFDFKARRCIKIKCAGEKPSGRASFAMCKGPD-KGTLILAGGTG-DDGLPRGDIWEYNSLSRKWNRLFLSDGGLASTFCRLYGQSVCCYGRSLIFFGGSSGKCYSNEVFKFDVDTLQYEQLKTKGTAPYARYKHQANIVGNKMFIFGGGNYLPSTKNIDVFCLDFETLRWNKVNALGQEPQARVAHTTVMDEISNKIYLWGGFNTSLNRLQDFFCFDIITSTWTALHCNKTSSYCPSPRAFHASCIYGDGIFIFGGANEENRYSDVWKYLVRHNPLSLMVLATRATLSTSG 338          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|163519 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z314_9STRA1.620e-269100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CEB6_9STRA4.580e-11550.41Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7FP90_ECTSI1.250e-9444.31Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FP81_ECTSI6.210e-9245.54Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZFC9_9STRA3.050e-8944.03Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CQE2_9STRA1.390e-8742.58Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2XVZ9_9STRA8.730e-6537.32Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3XN17_HETAK4.160e-6137.65Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2V4S9_9STRA3.230e-5937.61Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2UXP7_9STRA2.080e-5735.69Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_26contigContig_26:654628..656604 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|163519|e_gw1.26.171.1
BRITEko00000,ko04131
KEGG koko:K20285
Descriptionnitrile biosynthetic process
COG categoryP
Max annot lvl2759|Eukaryota
EggNOG OGsKOG0379@1|root,KOG0379@2759|Eukaryota
Evalue2.05e-95
Seed ortholog2880.D7FP90
Hectar predicted targeting categoryother localisation
TranscriptId163841
TrackFilteredModels1
ProteinId163519
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|163519gene_1971Tribonema minus UTEX_B_3156 geneContig_26 654628..656604 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|163519Trimin1|163519|e_gw1.26.171.1Tribonema minus UTEX_B_3156 polypeptideContig_26 654628..656604 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_1971_1exon_1971_1Tribonema minus UTEX_B_3156 exonContig_26 654628..654744 +
exon_1971_2exon_1971_2Tribonema minus UTEX_B_3156 exonContig_26 654967..655160 +
exon_1971_3exon_1971_3Tribonema minus UTEX_B_3156 exonContig_26 655339..655490 +
exon_1971_4exon_1971_4Tribonema minus UTEX_B_3156 exonContig_26 655633..655769 +
exon_1971_5exon_1971_5Tribonema minus UTEX_B_3156 exonContig_26 655984..656604 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_1971CDS_1971Tribonema minus UTEX_B_3156 CDSContig_26 654628..654744 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_1971 ID=mRNA_1971|Name=jgi.p|Trimin1|163519|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1221bp|location=Sequence derived from alignment at Contig_26:654628..656604+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGCATGCACTAGCAAAAAGCGTGCAGCAGTCTCTGCACCAACATGGGG
TAGCACTTTGGGGCGTTGGGTTTGCCTGGAAACATCAGGGGAAGGCCCTT
GTCCGCGATCAGGACATCATGTCGTTCAAAGCGGCAATACCGCCTTCCTA
TTTGGAGGTTGCGGTCACACGGAATTAGACAAGCTTGCTGCCCTCAACGA
TGCATACTCCTTCAACCTGGAAACGCACCAGTGGCAGCTGGTGAAGGTCA
ACTCCGAACCTCCCACGGCCAGGTCCAGCTTCAGCATGTGTGCTCCCCCC
GACGGCAGCAGGTCCATCTTCGTTGCAGGAGGCACAGGAGCAGACCCAGA
CAGTCTGTGCCATGACATTGTGGAGTTTGACACACATGCTCGGACATGGA
GCAGGGTAGTGGATGTGGGGGATACGCCTTGGATCTTGTACGGCCAGAGC
CAATGCGCCTACGGTGGTTCGCTCATCCTGTTTGGCGGCACAAGTGGCCT
CGAATATGTCAACGATCTCTATGAGATTGACATCAAGACACGACGGTGGC
GCAAGCTCACTACCACCGGCTCGATTCCCTCTCCACGCTACCAACATCAG
GCCATTGTGGTCGGCGATTCCATGTACGTAATCGGAGGCGGCGCATTCAT
GCCCCAGTATTCCGTCGTTGATGTCTACTGCCTCAATCTCATCACGCTCG
TCTGGAAAGCTGTCAACACCTCGGGGGAGGCCCCCCAGAGCCGCGTTGCG
CACACCTGCTCCTTTGATGGTGCCACAGACACCATCCTGATGTGGGGTGG
CTTCTCGTCCACACTGCATCGTCTCCAAGACTTCCACATCCTGCACTGCT
CAACCGCCACATGGACCACAGAGACCTCCAATCAGCCACCACCGCGTGCA
TTCCATGCAGCATGCTTCCACAAAGGTGCACTGTACCTGTTTTGCGGTGC
CGACGGAGACAACCGTTATAATGATGTGTGGCGCTACACGGTGCGTGAGA
GCCCGCCAAGTCTGGGCGTTCTAGCAGCGCGTCAGCTGAGGGCGACCGAG
GGCGACGACGAGAAACCCGTCAAGCCCCGCAAGAATCACCTGAGTGACAA
TGCTGCCACTGCAAGTCGCAAGTGCATCTCCCAAAGCGCCGGCAACAGTG
TACAGCTGCCTGCTGAGGTAGCCAGCGCCCTGTGCGGCTTCAACAAGTAC
GCCACCAGTCTCTCTGTGTAG
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protein sequence of jgi.p|Trimin1|163519

>Trimin1|163519|e_gw1.26.171.1 ID=Trimin1|163519|e_gw1.26.171.1|Name=jgi.p|Trimin1|163519|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=407bp
MACTSKKRAAVSAPTWGSTLGRWVCLETSGEGPCPRSGHHVVQSGNTAFL
FGGCGHTELDKLAALNDAYSFNLETHQWQLVKVNSEPPTARSSFSMCAPP
DGSRSIFVAGGTGADPDSLCHDIVEFDTHARTWSRVVDVGDTPWILYGQS
QCAYGGSLILFGGTSGLEYVNDLYEIDIKTRRWRKLTTTGSIPSPRYQHQ
AIVVGDSMYVIGGGAFMPQYSVVDVYCLNLITLVWKAVNTSGEAPQSRVA
HTCSFDGATDTILMWGGFSSTLHRLQDFHILHCSTATWTTETSNQPPPRA
FHAACFHKGALYLFCGADGDNRYNDVWRYTVRESPPSLGVLAARQLRATE
GDDEKPVKPRKNHLSDNAATASRKCISQSAGNSVQLPAEVASALCGFNKY
ATSLSV*
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mRNA from alignment at Contig_26:654628..656604+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_1971 ID=mRNA_1971|Name=jgi.p|Trimin1|163519|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1977bp|location=Sequence derived from alignment at Contig_26:654628..656604+ (Tribonema minus UTEX_B_3156 )
ATGGCATGCACTAGCAAAAAGCGTGCAGCAGTCTCTGCACCAACATGGGG TAGCACTTTGGGGCGTTGGGTTTGCCTGGAAACATCAGGGGAAGGCCCTT GTCCGCGATCAGGACATGTAAGAGTCTGCGCTGCTGTACAATTTATCAGA GCTGCACTCTCACAACAATGCTTGCTTTTGTTGTTTTTCCATAGTCCACT CTTGTGTTGCAGCATTCAATGCAACTAGCGATGCCTACTCGCTTGAAGCT GCTAGAACTCTAGCGACTGCATTCAATGTGTCAACTGCACAGCTCACATC TTGCATCTGATGCCTTTCCTCTCTGCTTTTGCACTGCAGCATGTCGTTCA AAGCGGCAATACCGCCTTCCTATTTGGAGGTTGCGGTCACACGGAATTAG ACAAGCTTGCTGCCCTCAACGATGCATACTCCTTCAACCTGGAAACGCAC CAGTGGCAGCTGGTGAAGGTCAACTCCGAACCTCCCACGGCCAGGTCCAG CTTCAGCATGTGTGCTCCCCCCGACGGCAGCAGGTGCACCTTTAGATGTC ACTCGTTTTATGAGACTTGATGCACTTGCAGCTAAACATTGCCTATTGTT ATTTGCAAGTCTGGCTTATGCCGAGTGTGTGTGTGGATCTGGCGTACCTG CATTAGACTGGCGACCGCCTGCAACCTTGAAACATGTGCTCCCACTGCTG CCCCCACGCAGGTCCATCTTCGTTGCAGGAGGCACAGGAGCAGACCCAGA CAGTCTGTGCCATGACATTGTGGAGTTTGACACACATGCTCGGACATGGA GCAGGGTAGTGGATGTGGGGGATACGCCTTGGATCTTGTACGGCCAGAGC CAATGCGCCTACGGTGAGTGTCATACCTGTCAGTTTCTGAGCACCCCACT GCTTGAGCCCCCCCCCCATCATCACTATAGCTCTGTGTATGCCATGTAGG CACAGCGCATGTGGTAATTGTGCCCCTTGCTCCTCTTTCGTTTACACCAT GACAGGTGGTTCGCTCATCCTGTTTGGCGGCACAAGTGGCCTCGAATATG TCAACGATCTCTATGAGATTGACATCAAGACACGACGGTGGCGCAAGCTC ACTACCACCGGCTCGATTCCCTCTCCACGCTACCAACATCAGGTACAGCT CTCCATCGAACTGGTAACCATTTATCATGCCACCGTTCACTAGATAGACT TGACCTGCCTGCAACACTCTCATCTGCATTTGAAATAGAACCTGTTGTCG CTTATTTCTTACACAAGTGCTCAATCAACTGCACGAACAGGCCTGCAATC ATGTCTAGTCGACAACTCCACTGACCACACCCCTCCCTGCTTTCTTTCTC CACCAGGCCATTGTGGTCGGCGATTCCATGTACGTAATCGGAGGCGGCGC ATTCATGCCCCAGTATTCCGTCGTTGATGTCTACTGCCTCAATCTCATCA CGCTCGTCTGGAAAGCTGTCAACACCTCGGGGGAGGCCCCCCAGAGCCGC GTTGCGCACACCTGCTCCTTTGATGGTGCCACAGACACCATCCTGATGTG GGGTGGCTTCTCGTCCACACTGCATCGTCTCCAAGACTTCCACATCCTGC ACTGCTCAACCGCCACATGGACCACAGAGACCTCCAATCAGCCACCACCG CGTGCATTCCATGCAGCATGCTTCCACAAAGGTGCACTGTACCTGTTTTG CGGTGCCGACGGAGACAACCGTTATAATGATGTGTGGCGCTACACGGTGC GTGAGAGCCCGCCAAGTCTGGGCGTTCTAGCAGCGCGTCAGCTGAGGGCG ACCGAGGGCGACGACGAGAAACCCGTCAAGCCCCGCAAGAATCACCTGAG TGACAATGCTGCCACTGCAAGTCGCAAGTGCATCTCCCAAAGCGCCGGCA ACAGTGTACAGCTGCCTGCTGAGGTAGCCAGCGCCCTGTGCGGCTTCAAC AAGTACGCCACCAGTCTCTCTGTGTAG
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Coding sequence (CDS) from alignment at Contig_26:654628..656604+

>mRNA_1971 ID=mRNA_1971|Name=jgi.p|Trimin1|163519|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1221bp|location=Sequence derived from alignment at Contig_26:654628..656604+ (Tribonema minus UTEX_B_3156 )
ATGGCATGCACTAGCAAAAAGCGTGCAGCAGTCTCTGCACCAACATGGGG
TAGCACTTTGGGGCGTTGGGTTTGCCTGGAAACATCAGGGGAAGGCCCTT
GTCCGCGATCAGGACATCATGTCGTTCAAAGCGGCAATACCGCCTTCCTA
TTTGGAGGTTGCGGTCACACGGAATTAGACAAGCTTGCTGCCCTCAACGA
TGCATACTCCTTCAACCTGGAAACGCACCAGTGGCAGCTGGTGAAGGTCA
ACTCCGAACCTCCCACGGCCAGGTCCAGCTTCAGCATGTGTGCTCCCCCC
GACGGCAGCAGGTCCATCTTCGTTGCAGGAGGCACAGGAGCAGACCCAGA
CAGTCTGTGCCATGACATTGTGGAGTTTGACACACATGCTCGGACATGGA
GCAGGGTAGTGGATGTGGGGGATACGCCTTGGATCTTGTACGGCCAGAGC
CAATGCGCCTACGGTGGTTCGCTCATCCTGTTTGGCGGCACAAGTGGCCT
CGAATATGTCAACGATCTCTATGAGATTGACATCAAGACACGACGGTGGC
GCAAGCTCACTACCACCGGCTCGATTCCCTCTCCACGCTACCAACATCAG
GCCATTGTGGTCGGCGATTCCATGTACGTAATCGGAGGCGGCGCATTCAT
GCCCCAGTATTCCGTCGTTGATGTCTACTGCCTCAATCTCATCACGCTCG
TCTGGAAAGCTGTCAACACCTCGGGGGAGGCCCCCCAGAGCCGCGTTGCG
CACACCTGCTCCTTTGATGGTGCCACAGACACCATCCTGATGTGGGGTGG
CTTCTCGTCCACACTGCATCGTCTCCAAGACTTCCACATCCTGCACTGCT
CAACCGCCACATGGACCACAGAGACCTCCAATCAGCCACCACCGCGTGCA
TTCCATGCAGCATGCTTCCACAAAGGTGCACTGTACCTGTTTTGCGGTGC
CGACGGAGACAACCGTTATAATGATGTGTGGCGCTACACGGTGCGTGAGA
GCCCGCCAAGTCTGGGCGTTCTAGCAGCGCGTCAGCTGAGGGCGACCGAG
GGCGACGACGAGAAACCCGTCAAGCCCCGCAAGAATCACCTGAGTGACAA
TGCTGCCACTGCAAGTCGCAAGTGCATCTCCCAAAGCGCCGGCAACAGTG
TACAGCTGCCTGCTGAGGTAGCCAGCGCCCTGTGCGGCTTCAACAAGTAC
GCCACCAGTCTCTCTGTGTAG
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