mRNA_1921 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|163436
Unique NamemRNA_1921
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|163436 vs. uniprot
Match: A0A835Z861_9STRA (Metallo-dependent phosphatase-like protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z861_9STRA)

HSP 1 Score: 515 bits (1327), Expect = 4.580e-185
Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 1
Query:    1 MQLQIASDLHLEQGCTSNYYSIIKPAADILILAGDVAYATHAQIPPFMRKMSEAFEKVLLVPGNHERYSHDLSMSMTEMDMHLHGVLQEFSNVSLLNNKVEERKGVKFVGSTLWSHIPQQDRYEVSTCINDYRYILDGTGRAITPAYTSGLHRDAVAFLEKHCDTNSVVITHHCPQTTRTSHPRYAGSPTNCAFSTDVSLTQMPQLWVSGHTHFNHDFVKAGTRFISNQYRNENWCMPYSASKTVTIA 744
            MQLQIASDLHLEQGCTSNYYSIIKPAADILILAGDVAYATHAQIPPFMRKMSEAFEKVLLVPGNHERYSHDLSMSMTEMDMHLHGVLQEFSNVSLLNNKVEERKGVKFVGSTLWSHIPQQDRYEVSTCINDYRYILDGTGRAITPAYTSGLHRDAVAFLEKHCDTNSVVITHHCPQTTRTSHPRYAGSPTNCAFSTDVSLTQMPQLWVSGHTHFNHDFVKAGTRFISNQYRNENWCMPYSASKTVTIA
Sbjct:    1 MQLQIASDLHLEQGCTSNYYSIIKPAADILILAGDVAYATHAQIPPFMRKMSEAFEKVLLVPGNHERYSHDLSMSMTEMDMHLHGVLQEFSNVSLLNNKVEERKGVKFVGSTLWSHIPQQDRYEVSTCINDYRYILDGTGRAITPAYTSGLHRDAVAFLEKHCDTNSVVITHHCPQTTRTSHPRYAGSPTNCAFSTDVSLTQMPQLWVSGHTHFNHDFVKAGTRFISNQYRNENWCMPYSASKTVTIA 248          
BLAST of jgi.p|Trimin1|163436 vs. uniprot
Match: A0A835Z6I0_9STRA (Metallo-dependent phosphatase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6I0_9STRA)

HSP 1 Score: 278 bits (711), Expect = 2.660e-91
Identity = 136/249 (54.62%), Postives = 177/249 (71.08%), Query Frame = 1
Query:    1 MQLQIASDLHLEQGCTSNYYSIIKPAADILILAGDVAYATHAQIPPFMRKMSEAFEKVLLVPGNHERYSHDLSMSMTEMDMHLHGVLQEFSNVSLLNNKVEERKGVKFVGSTLWSHIPQQDRYEVSTCINDYRYILDGTGRAITPAYTSGLHRDAVAFLEKHCDTNSVVITHHCPQTTRTSHPRYAGSPTNCAFSTDVSLTQMPQLWVSGHTHFNHDFVK--AGTRFISNQYRNENWCMPYSASKTVTI 741
            M++ + SD+HLE G    + S++   AD+L+LAGD+A AT  ++P F+ + SE +E+VL VPGNHE Y    S SM EM   L   L  F NV+LL++ V E  GVKFVGSTLWS +P     EVS C+NDYR++     R I+P  T+ LH ++V FL +HCD +SVVITHHCP+T +TSHPRY GS  +CAF+TDVSL +MP+LWVSGHTHFNHDF +   GTRF+SNQYRNENW +P+S + T+ I
Sbjct:    1 MRIHVVSDVHLEYGGAPPFSSLVAAEADVLVLAGDIAAATCPELPDFVARASEIYERVLYVPGNHEYYHS--SNSMAEMRACLRAALDPFGNVTLLDDDVAEIGGVKFVGSTLWSRVPADSELEVSRCVNDYRFVR-AKCRPISPCETTELHAESVDFLRRHCDADSVVITHHCPRTRKTSHPRYDGSSASCAFATDVSLPRMPRLWVSGHTHFNHDFQEPQGGTRFLSNQYRNENWRLPHSPTMTLEI 246          
BLAST of jgi.p|Trimin1|163436 vs. uniprot
Match: A0A835Z038_9STRA (Metallo-dependent phosphatase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z038_9STRA)

HSP 1 Score: 259 bits (661), Expect = 9.330e-84
Identity = 127/247 (51.42%), Postives = 169/247 (68.42%), Query Frame = 1
Query:    1 MQLQIASDLHLEQGCTSNYYSIIKPAADILILAGDVAYATHAQIPPFMRKMSEAFEKVLLVPGNHERYSHDLSMSMTEMDMHLHGVLQEFSNVSLLNNKVEERKGVKFVGSTLWSHIPQQDRYEVSTCINDYRYILDGTGRAITPAYTSGLHRDAVAFLEKHCDTNSVVITHHCPQTTRTSHPRYAGSPTNCAFSTDVSLTQMPQLWVSGHTHFNHDFVKAGTRFISNQYRNENWCMPYSASKTVTI 741
            M +Q  SD+HLEQG    +  ++ PAAD+LI+AGDVA A H  +P F+R  SEAFEKVL V GNHE YS     SM E++ H+  ++ E+SNVS++N  V E +GV FVG T+WSH+P   R E + C+NDYR++    G  ++PA T   H+   AFL  +   +SVVITHH P+T  TSHPRYAG   NC F+TD++L  MP+LW++GHTHFN DFV   TRF+SN +RNEN+ +P+S  KT+ I
Sbjct:    1 MLIQFLSDVHLEQGAVP-FSDVVTPAADLLIVAGDVAPARHFSLPYFVRHCSEAFEKVLWVYGNHEWYSQ--CESMDEIESHMADLISEYSNVSIMNRDVIEWRGVNFVGCTMWSHVPASAREEAALCVNDYRFVRKEHG-PVSPADTDAFHQRDSAFLSSNSTADSVVITHHAPRTRTTSHPRYAGCSNNCCFATDMNLPAMPKLWIAGHTHFNFDFVDGDTRFVSNMFRNENYRVPFSRCKTIEI 243          
BLAST of jgi.p|Trimin1|163436 vs. uniprot
Match: A0A835YX12_9STRA (Metallophos domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX12_9STRA)

HSP 1 Score: 243 bits (621), Expect = 2.410e-74
Identity = 126/245 (51.43%), Postives = 164/245 (66.94%), Query Frame = 1
Query:    7 LQIASDLHLEQGCTSNYYSIIKPAADILILAGDVAYATHAQIPPFMRKMSEAFEKVLLVPGNHERYSHDLSMSMTEMDMHLHGVLQEFSNVSLLNNKVEERKGVKFVGSTLWSHIPQQDRYEVSTCINDYRYILDGTGRAITPAYTSGLHRDAVAFLEKHCDTNSVVITHHCPQTTRTSHPRYAGSPTNCAFSTDVSLTQMPQLWVSGHTHFNHDFVKAGTRFISNQYRNENWCMPYSASKTVTI 741
            L+IA  LH       N Y ++ PAA++LI+AGDVA A H  +P F+R  SEAFEKVL V GNHE YS     SM E   H+  ++ E+SNVS++N  V E +GVKFVG T+WSH+P   R E + C+NDYR++    G  ++PA T   H+   AFL  +   +SVVITHH P+T  TSHPRYAG   NC F+TD++L  MP+LW++GHTHFN DFV   TRF+SN +RNEN+ +P+S  KTV I
Sbjct:  277 LRIAVPLH-------NTY-VVTPAAELLIVAGDVAPAHHFALPYFVRHCSEAFEKVLWVYGNHEWYSR--CESMDESASHMADLISEYSNVSVMNPDVVEWRGVKFVGCTMWSHVPVSAREEAALCVNDYRFVRKAHG-PVSPADTDAFHQRDSAFLSSNSTADSVVITHHAPRTRTTSHPRYAGCSNNCCFATDMNLPAMPKLWIAGHTHFNFDFVDGDTRFVSNMFRNENYRVPFSPCKTVEI 510          
BLAST of jgi.p|Trimin1|163436 vs. uniprot
Match: A0A1W6E5L5_9BACT (Metallophos domain-containing protein n=2 Tax=Fibrella TaxID=861914 RepID=A0A1W6E5L5_9BACT)

HSP 1 Score: 133 bits (334), Expect = 2.470e-34
Identity = 90/243 (37.04%), Postives = 131/243 (53.91%), Query Frame = 1
Query:    1 MQLQIASDLHLEQGCTSNYY--SIIKPAADILILAGDVA----YATHAQIPPFMRKMSEAFEKVLLVPGNHERYSHDLSMSMTEMDMHLHGVLQEFSNVSLLNNKVEERKGVKFVGSTLWSHIPQQDRYEVSTCINDYRYILDGTGRAITPA-YTSGLHRDAVAFLE----KHCDTNSVVITHHCPQTTRTSHPRYAGSPTNCAFSTDVS---LTQMPQLWVSGHTHFNHDFVKAG-TRFISN 684
            M +Q  SDLHLE    + Y   + I+PA D+LILAGD+     Y +  Q   F + +S  F +V  VPGNHE Y    S+    +D  L   L   +NV LLNN      GV+F+ STLWSHI Q++ Y++ T + D++ +++  G  + PA YT  LH+ ++ FL     K     +VV+THH P   +  HPR+ GS     F T++    L   P  W+ GH+H N   ++ G T+ +SN
Sbjct:    1 MTIQYVSDLHLEFPDNATYLLANPIEPAGDVLILAGDITSLAYYKSRKQEKAFFKTLSNQFRQVYYVPGNHEFYR---SLDARLLDQPLQETLH--ANVFLLNNVARTYGGVRFLFSTLWSHIDQENEYQLGTGMADFQ-LINYRGNRLKPAMYTRFLHQPSLDFLRTELAKPVSEPTVVVTHHLPSL-QCVHPRHTGSLLEQGFVTNLDSLILDTQPAYWIYGHSHANRPAIQLGNTQLLSN 236          
BLAST of jgi.p|Trimin1|163436 vs. uniprot
Match: A0A4Q3PKY6_9BACT (Metallophosphoesterase n=1 Tax=Cytophagaceae bacterium TaxID=2026729 RepID=A0A4Q3PKY6_9BACT)

HSP 1 Score: 128 bits (322), Expect = 1.490e-32
Identity = 87/243 (35.80%), Postives = 130/243 (53.50%), Query Frame = 1
Query:    1 MQLQIASDLHLEQGCTSNYY--SIIKPAADILILAGDVA----YATHAQIPPFMRKMSEAFEKVLLVPGNHERYSHDLSMSMTEMDMHLHGVLQEFSNVSLLNNKVEERKGVKFVGSTLWSHIPQQDRYEVSTCINDYRYILDGTGRAITPA-YTSGLHRDAVAFLE----KHCDTNSVVITHHCPQTTRTSHPRYAGSPTNCAFSTDVS---LTQMPQLWVSGHTHFNHDFVKAG-TRFISN 684
            M +Q ASDLHLE    + +   + I+P  D+LILAGD+     Y +  Q   F R ++  F +V  +PGNHE Y    S+    +D      L    NV LLNN      GV+F+ STLWSHI Q++ Y V + + D++ +++  G+ + PA Y+  LH  ++AFL+    K     +VV+THH P   +  HPR+ GS     F+ D+    L   P  W+ GH+H N   ++ G T+ +SN
Sbjct:    1 MIIQYASDLHLEFPANAAHLLANPIEPVGDVLILAGDITSLSYYKSRRQEKTFFRTLANQFRQVYYIPGNHEFYR---SLDARLVDQPFQEALHP--NVFLLNNVACTYGGVRFLFSTLWSHIDQENEYHVGSGMADFQ-LINYHGKRLHPAVYSRDLHGPSLAFLQSELAKPTTIPTVVVTHHLPSL-QCVHPRHVGSSLEQGFANDLDKLILDSQPDYWIYGHSHANRPPIQVGKTQLVSN 236          
BLAST of jgi.p|Trimin1|163436 vs. uniprot
Match: A0A3B7MYA7_9BACT (Metallophosphoesterase n=1 Tax=Paraflavitalea soli TaxID=2315862 RepID=A0A3B7MYA7_9BACT)

HSP 1 Score: 124 bits (311), Expect = 5.570e-31
Identity = 88/243 (36.21%), Postives = 127/243 (52.26%), Query Frame = 1
Query:    1 MQLQIASDLHLEQGCTSNYYSI--IKPAADILILAGDVA-YATHAQIPPFMRKMSEAFEKVLLVPGNHERYSHDLSMSMTEMDMHLHGVLQEF--SNVSLLNNKVEERKGVKFVGSTLWSHIPQQDRYEVSTCINDYRYILDGTGRAITPAYTSGLHRDAVAFLEKH---CDTNSVVI-THHCPQTTRTSHP-RYAGSPTNCAFST---DVSLTQMPQLWVSGHTHFNH-DFVKAGTRFISNQ 687
            M +Q  SDLHLE+     ++    I PAAD LILAGD+  +A   Q P F   +S+ F+    +PGNHE Y  D+        +H  G  +E    NV LLNN+VE+ +G+  V STLWSHI     + ++  + D+R I  G G    P +++ LH++   F+E       T+ +V+ THH P  T  ++P +Y  SP N AF+T   D         W+ GH H N  +F    TR ++NQ
Sbjct:    1 MTIQYCSDLHLERPENYAWWKKRPILPAADTLILAGDILPFAEMDQFPDFFHYLSDHFQATYWLPGNHEYYGSDI--------LHRSGPFREAIRPNVFLLNNQVEQLEGITLVFSTLWSHISPAAEWTIARYVTDFRAITHG-GERYLPLHSNRLHKECRQFIETAVAAAPTSKIVVATHHIP--TFLNYPAKYKNSPVNEAFATELHDFIYQSSIDTWIFGHHHVNTPEFNVGNTRMLTNQ 232          
BLAST of jgi.p|Trimin1|163436 vs. uniprot
Match: UPI00037BF1E1 (metallophosphoesterase n=1 Tax=Lewinella persica TaxID=70998 RepID=UPI00037BF1E1)

HSP 1 Score: 122 bits (305), Expect = 4.290e-30
Identity = 88/240 (36.67%), Postives = 129/240 (53.75%), Query Frame = 1
Query:    1 MQLQIASDLHLEQGCTSNYY--SIIKPAADILILAGDVAY-ATHAQIPPFMRKMSEAFEKVLLVPGNHERYSHDLSMSMTEMDMHLHGVLQEFSNVSLLNNKVEERKGVKFVGSTLWSHIPQQDRYEVSTCINDYRYILDGTGRAITPAYTSGLHRDAVAFLEKHC---DTN-SVVITHHCPQTTRTSHPRYAGSPTNCAFSTDVS-LTQMPQL--WVSGHTHFN-HDFVKAGTRFISNQ 687
            M++Q  SDLHLE      +   + I PA +IL++AGD  Y   H +   F+R ++  F +  L+PGNHE Y       +TE        L E  NV++LNN VEE+ GV+ + ST+WS I  +D   +   +ND+R ++   G+ +T A  + LH  ++ FL        TN  VV+THH P     +HPR+ G+  N AF TD + L +   L  W+ GH+H N   F   GTR ++NQ
Sbjct:    1 MKIQYLSDLHLEFAANRAWLRENPIVPAGEILVVAGDTFYLGEHHKADDFIRYVARHFRQTYLIPGNHEYYG---GFDVTETPFSFRQSLAE--NVTMLNNVVEEKDGVRLIFSTMWSLI-DRDEIGIMRGLNDFR-LIQNQGKLLTVAGFNELHARSMDFLRGELARPSTNPKVVVTHHLPAD-GCNHPRFRGTLLNPAFCTDYTELIEAADLTAWIYGHSHRNVAKFELKGTRILTNQ 232          
BLAST of jgi.p|Trimin1|163436 vs. uniprot
Match: A0A372FDC1_9BACT (Metallophosphoesterase n=1 Tax=Emticicia sp. C21 TaxID=2302915 RepID=A0A372FDC1_9BACT)

HSP 1 Score: 120 bits (300), Expect = 2.640e-29
Identity = 87/246 (35.37%), Postives = 125/246 (50.81%), Query Frame = 1
Query:    1 MQLQIASDLHLEQGCTSNYY--SIIKPAADILILAGDVAYATHAQIP-----PFMRKMSEAFEKVLLVPGNHERY-SHDLSMSMTEMDMHLHGVLQEF-SNVSLLNNKVEERKGVKFVGSTLWSHIPQQDRYEVSTCINDYRYILDGTGRAITPAYTSGLHRDAVAFLEKHC----DTNSVVITHHCPQTTRTSHPRYAGSPTNCAFSTDVS---LTQMPQLWVSGHTHFNHDFVKAG-TRFISNQ 687
            M++Q  SDLHLE      Y   + I+P  ++LILAGD+  A +   P      F + +SE FE+V ++ GNHE Y S D+S+    +       L+E  SNV LLNN+  + K V F  +TLWS I Q D   +   + D+  I       +   Y   LH+ A+ FL+       +T  VVI+HH P   R  H  + GS    AF+TD+    L   P  WV GH+H N   ++ G T+ ++NQ
Sbjct:    1 MKIQYCSDLHLEMTINKEYLLQNPIEPVGEVLILAGDITNAKYYDDPRPIEKQFFKTLSEQFEQVFIIAGNHEFYRSWDISVLEKPL-------LKEIVSNVFLLNNQTIDYKDVSFFFTTLWSEIHQLDEDYIRRSMPDFSLISYHKKTFLVKHYNE-LHKQALNFLDSSLPQSENTKKVVISHHLPSL-RCVHSDHIGSRLGSAFATDLDKFILKHQPDYWVYGHSHRNRSEIQIGKTKLVTNQ 237          
BLAST of jgi.p|Trimin1|163436 vs. uniprot
Match: A0A650DB74_9VIRU (Metallophosphatase n=3 Tax=Moumouvirus TaxID=985782 RepID=A0A650DB74_9VIRU)

HSP 1 Score: 120 bits (300), Expect = 4.530e-29
Identity = 80/257 (31.13%), Postives = 127/257 (49.42%), Query Frame = 1
Query:    7 LQIASDLHLEQGCTSNYYSIIKPAAD-------------ILILAGDVAYATHAQIPPFMRKMSEAFEKVLLVPGNHERYSHDL--SMSMTEMDMHLHGVLQEFSNVSLLNNKVEERKGVKFVGSTLWSHIPQQDRYEVSTCINDY----RYILDGTGRAITPAYTSGLHRDAVAFLE---KHCDTNSVVITHHCP------QTTRTSHPRYAGSPTNCAFSTDVS--LTQMPQLWVSGHTHFNHDFVKAGTRFISNQ 687
            L+ ASDLHLE      + +I KP                 L L GD+       +  F+ K+S  +  V  VPGNHE Y+ D   S  + +M   L  +  +F N+  ++N+  + + +KF+GSTLWSHIP +   E++  INDY    +Y +DG    I    T+  +++++ F++   K+ +   +++THH P      +   T+ P Y  SP N AF  D+S  +T    LW+ GHTH++  F        +NQ
Sbjct:    4 LRYASDLHLEY-----FDNIYKPKIMELWNFNTCEKDEYYLALVGDIGNPYQKNLELFLEKVSSKYSLVFYVPGNHEYYNLDKKNSRDIEKMKKKLRKICYKFHNIVFMDNESYDLEDIKFIGSTLWSHIPDEKNLEINKSINDYHLIKKYNIDGELEKINCDDTNKWNKESIDFIKQELKNTNKPCIILTHHAPLFSDPEKNHFTADPIYINSPNNFAFHNDLSEIITHPIILWIYGHTHYSGIFHYNNVSICTNQ 255          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|163436 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z861_9STRA4.580e-185100.00Metallo-dependent phosphatase-like protein n=2 Tax... [more]
A0A835Z6I0_9STRA2.660e-9154.62Metallo-dependent phosphatase-like protein n=1 Tax... [more]
A0A835Z038_9STRA9.330e-8451.42Metallo-dependent phosphatase-like protein n=1 Tax... [more]
A0A835YX12_9STRA2.410e-7451.43Metallophos domain-containing protein n=1 Tax=Trib... [more]
A0A1W6E5L5_9BACT2.470e-3437.04Metallophos domain-containing protein n=2 Tax=Fibr... [more]
A0A4Q3PKY6_9BACT1.490e-3235.80Metallophosphoesterase n=1 Tax=Cytophagaceae bacte... [more]
A0A3B7MYA7_9BACT5.570e-3136.21Metallophosphoesterase n=1 Tax=Paraflavitalea soli... [more]
UPI00037BF1E14.290e-3036.67metallophosphoesterase n=1 Tax=Lewinella persica T... [more]
A0A372FDC1_9BACT2.640e-2935.37Metallophosphoesterase n=1 Tax=Emticicia sp. C21 T... [more]
A0A650DB74_9VIRU4.530e-2931.13Metallophosphatase n=3 Tax=Moumouvirus TaxID=98578... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_26contigContig_26:510737..511483 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|163436|e_gw1.26.111.1
DescriptionCalcineurin-like phosphoesterase
COG categoryS
Max annot lvl976|Bacteroidetes
EggNOG OGsCOG1409@1|root,COG1409@2|Bacteria,4NNCZ@976|Bacteroidetes,1IS86@117747|Sphingobacteriia
Evalue7.03e-31
Seed ortholog1122179.KB890425_gene3532
Hectar predicted targeting categoryother localisation
TranscriptId163758
TrackFilteredModels1
ProteinId163436
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|163436gene_1921Tribonema minus UTEX_B_3156 geneContig_26 510737..511483 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_1921_1exon_1921_1Tribonema minus UTEX_B_3156 exonContig_26 510737..511483 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_1921CDS_1921Tribonema minus UTEX_B_3156 CDSContig_26 510737..511483 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|163436Trimin1|163436|e_gw1.26.111.1Tribonema minus UTEX_B_3156 polypeptideContig_26 510737..511483 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_1921 ID=mRNA_1921|Name=jgi.p|Trimin1|163436|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=747bp|location=Sequence derived from alignment at Contig_26:510737..511483- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCAACTTCAAATAGCGTCGGATTTGCACCTGGAGCAGGGGTGCACCAG
CAATTATTACAGCATCATAAAGCCTGCGGCTGACATACTCATATTGGCAG
GTGATGTTGCGTATGCGACGCACGCTCAGATACCACCATTCATGAGAAAG
ATGTCAGAGGCGTTCGAAAAGGTACTACTGGTGCCAGGTAATCATGAAAG
ATACAGCCATGACCTGAGCATGTCCATGACTGAGATGGATATGCATCTCC
ATGGTGTGCTGCAGGAGTTTTCGAATGTGAGCTTGCTGAACAACAAGGTC
GAAGAGCGGAAAGGCGTCAAGTTTGTTGGAAGCACACTATGGTCACACAT
CCCTCAGCAGGACCGATATGAAGTGTCGACATGCATCAATGATTACCGCT
ACATTCTGGATGGAACGGGGAGAGCCATCACCCCAGCATACACCTCTGGT
CTGCACAGAGACGCAGTAGCATTTCTGGAGAAGCACTGCGACACCAACTC
TGTAGTCATTACACATCACTGTCCACAAACAACAAGAACCTCACACCCAA
GGTATGCAGGCTCACCAACCAACTGCGCTTTTTCAACAGATGTGTCACTT
ACACAGATGCCGCAGCTGTGGGTGAGTGGACATACACACTTCAACCATGA
CTTTGTGAAGGCGGGCACCAGATTTATTTCAAATCAATATAGAAATGAAA
ATTGGTGTATGCCCTACTCAGCATCGAAAACGGTAACAATTGCATAA
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protein sequence of jgi.p|Trimin1|163436

>Trimin1|163436|e_gw1.26.111.1 ID=Trimin1|163436|e_gw1.26.111.1|Name=jgi.p|Trimin1|163436|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=249bp
MQLQIASDLHLEQGCTSNYYSIIKPAADILILAGDVAYATHAQIPPFMRK
MSEAFEKVLLVPGNHERYSHDLSMSMTEMDMHLHGVLQEFSNVSLLNNKV
EERKGVKFVGSTLWSHIPQQDRYEVSTCINDYRYILDGTGRAITPAYTSG
LHRDAVAFLEKHCDTNSVVITHHCPQTTRTSHPRYAGSPTNCAFSTDVSL
TQMPQLWVSGHTHFNHDFVKAGTRFISNQYRNENWCMPYSASKTVTIA*
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mRNA from alignment at Contig_26:510737..511483-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_1921 ID=mRNA_1921|Name=jgi.p|Trimin1|163436|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=747bp|location=Sequence derived from alignment at Contig_26:510737..511483- (Tribonema minus UTEX_B_3156 )
ATGCAACTTCAAATAGCGTCGGATTTGCACCTGGAGCAGGGGTGCACCAG CAATTATTACAGCATCATAAAGCCTGCGGCTGACATACTCATATTGGCAG GTGATGTTGCGTATGCGACGCACGCTCAGATACCACCATTCATGAGAAAG ATGTCAGAGGCGTTCGAAAAGGTACTACTGGTGCCAGGTAATCATGAAAG ATACAGCCATGACCTGAGCATGTCCATGACTGAGATGGATATGCATCTCC ATGGTGTGCTGCAGGAGTTTTCGAATGTGAGCTTGCTGAACAACAAGGTC GAAGAGCGGAAAGGCGTCAAGTTTGTTGGAAGCACACTATGGTCACACAT CCCTCAGCAGGACCGATATGAAGTGTCGACATGCATCAATGATTACCGCT ACATTCTGGATGGAACGGGGAGAGCCATCACCCCAGCATACACCTCTGGT CTGCACAGAGACGCAGTAGCATTTCTGGAGAAGCACTGCGACACCAACTC TGTAGTCATTACACATCACTGTCCACAAACAACAAGAACCTCACACCCAA GGTATGCAGGCTCACCAACCAACTGCGCTTTTTCAACAGATGTGTCACTT ACACAGATGCCGCAGCTGTGGGTGAGTGGACATACACACTTCAACCATGA CTTTGTGAAGGCGGGCACCAGATTTATTTCAAATCAATATAGAAATGAAA ATTGGTGTATGCCCTACTCAGCATCGAAAACGGTAACAATTGCATAA
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Coding sequence (CDS) from alignment at Contig_26:510737..511483-

>mRNA_1921 ID=mRNA_1921|Name=jgi.p|Trimin1|163436|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=747bp|location=Sequence derived from alignment at Contig_26:510737..511483- (Tribonema minus UTEX_B_3156 )
ATGCAACTTCAAATAGCGTCGGATTTGCACCTGGAGCAGGGGTGCACCAG
CAATTATTACAGCATCATAAAGCCTGCGGCTGACATACTCATATTGGCAG
GTGATGTTGCGTATGCGACGCACGCTCAGATACCACCATTCATGAGAAAG
ATGTCAGAGGCGTTCGAAAAGGTACTACTGGTGCCAGGTAATCATGAAAG
ATACAGCCATGACCTGAGCATGTCCATGACTGAGATGGATATGCATCTCC
ATGGTGTGCTGCAGGAGTTTTCGAATGTGAGCTTGCTGAACAACAAGGTC
GAAGAGCGGAAAGGCGTCAAGTTTGTTGGAAGCACACTATGGTCACACAT
CCCTCAGCAGGACCGATATGAAGTGTCGACATGCATCAATGATTACCGCT
ACATTCTGGATGGAACGGGGAGAGCCATCACCCCAGCATACACCTCTGGT
CTGCACAGAGACGCAGTAGCATTTCTGGAGAAGCACTGCGACACCAACTC
TGTAGTCATTACACATCACTGTCCACAAACAACAAGAACCTCACACCCAA
GGTATGCAGGCTCACCAACCAACTGCGCTTTTTCAACAGATGTGTCACTT
ACACAGATGCCGCAGCTGTGGGTGAGTGGACATACACACTTCAACCATGA
CTTTGTGAAGGCGGGCACCAGATTTATTTCAAATCAATATAGAAATGAAA
ATTGGTGTATGCCCTACTCAGCATCGAAAACGGTAACAATTGCATAA
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