Trimin1|354509|estExt_Genemark1.C_Ctg_2580014 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|354509
Unique NameTrimin1|354509|estExt_Genemark1.C_Ctg_2580014
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length230
Homology
BLAST of jgi.p|Trimin1|354509 vs. uniprot
Match: A0A835YSF1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSF1_9STRA)

HSP 1 Score: 405 bits (1041), Expect = 4.240e-142
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0
Query:    1 MDATTLKLRSRMEAGGESLPYHCHLHGMFQHKRHEHVAKRALIESQLWAWGEPMLDVLDLAGCSGVSVTEVLGMHDFELHSKLREAATAFRETKYRALRLEAALEAAYSKKKLLQARIAELESKLQQVQQLLQRELATVSTQVELAPVCSAXXXXXXXXXXXXXXXXXLHEALTAAPAAAPSSTRAGNKGARGGGDIRPYDSCTYGTKAQDDVKVPVWCLTFAYNIRIG 229
            MDATTLKLRSRMEAGGESLPYHCHLHGMFQHKRHEHVAKRALIESQLWAWGEPMLDVLDLAGCSGVSVTEVLGMHDFELHSKLREAATAFRETKYRALRLEAALEAAYSKKKLLQARIAELESKLQQVQQLLQRELATVSTQVELAPVCSAXXXXXXXXXXXXXXXXXLHEALTAAPAAAPSSTRAGNKGARGGGDIRPYDSCTYGTKAQDDVKVPVWCLTFAYNIRIG
Sbjct:    1 MDATTLKLRSRMEAGGESLPYHCHLHGMFQHKRHEHVAKRALIESQLWAWGEPMLDVLDLAGCSGVSVTEVLGMHDFELHSKLREAATAFRETKYRALRLEAALEAAYSKKKLLQARIAELESKLQQVQQLLQRELATVSTQVELAPVCSAXXXXXXXXXXXXXXXXXLHEALTAAPAAAPSSTRAGNKGARGGGDIRPYDSCTYGTKAQDDVKVPVWCLTFAYNIRIG 229          
BLAST of jgi.p|Trimin1|354509 vs. uniprot
Match: A0A835ZGW1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGW1_9STRA)

HSP 1 Score: 322 bits (826), Expect = 2.690e-101
Identity = 191/197 (96.95%), Postives = 194/197 (98.48%), Query Frame = 0
Query:    1 MDATTLKLRSRMEAGGESLPYHCHLHGMFQHKRHEHVAKRALIESQLWAWGEPMLDVLDLAGCSGVSVTEVLGMHDFELHSKLREAATAFRETKYRALRLEAALEAAYSKKKLLQARIAELESKLQQVQQLLQRELATVSTQVELAPVCSAXXXXXXXXXXXXXXXXXLHEALTAAPAAAPSSTRAGNKGARGGGDI 197
            MDATTLKLRSRMEAGGESLPYHCHLHGMFQHKRHEHVAKRALIE QLWAWGEPMLDVLDLAGCSGVSVTEVLGMHDFELHSKLREAATAFRETKYRA+RLEAALEAAYSKKKLLQARIAELESKLQQVQQL QRELATVSTQVELAPVCS XXXXXXXXXXXXXXXXXLHEALTAAPAAAPSSTRAG+KGARGGGD+
Sbjct:    1 MDATTLKLRSRMEAGGESLPYHCHLHGMFQHKRHEHVAKRALIEPQLWAWGEPMLDVLDLAGCSGVSVTEVLGMHDFELHSKLREAATAFRETKYRAIRLEAALEAAYSKKKLLQARIAELESKLQQVQQLPQRELATVSTQVELAPVCSXXXXXXXXXXXXXXXXXXLHEALTAAPAAAPSSTRAGDKGARGGGDM 197          
BLAST of jgi.p|Trimin1|354509 vs. uniprot
Match: A0A836CGY8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGY8_9STRA)

HSP 1 Score: 172 bits (435), Expect = 2.680e-50
Identity = 96/124 (77.42%), Postives = 108/124 (87.10%), Query Frame = 0
Query:   12 MEAGGESLPYHCHLHGMF--QHKRHEHVAKRALIESQLWAWGEPMLDVLDLAGCSGVSVTEVLGMHDFELHSKLREA--ATAFRETKYRALRLEAALEAAYSKKKLLQARIAELESKLQQVQQL 131
            MEA GESLPYHCHL+G++  Q+K HEHV KRAL ESQLWAWGEPMLD+LDLAG SGV  TEVLGMHD ELHSKLREA  ATAFRETK++A+ LEAAL+AA SK+ LLQ RIAEL+S+LQQVQQL
Sbjct:    1 MEARGESLPYHCHLYGIYKLQNKWHEHVVKRALTESQLWAWGEPMLDLLDLAGRSGVFFTEVLGMHDDELHSKLREALAATAFRETKFKAICLEAALKAANSKETLLQTRIAELDSELQQVQQL 124          
BLAST of jgi.p|Trimin1|354509 vs. uniprot
Match: A0A835Z351_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z351_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 1.860e-14
Identity = 53/103 (51.46%), Postives = 64/103 (62.14%), Query Frame = 0
Query:    1 MDATTLKLRSRMEAGGESLPYHCHLH--GMFQHKRHEHVAKRALIESQLWAWGEPMLDVLDLAGCSGVSVTEVLGMHDFELHSKLREAATAFRETKYRALRLE 101
            MDATTLK+ S MEAGGES   H H       QH+      +RAL+ SQL  WGE +L +L LA CS VSV   L M D +L +KLREAATAF + K +  +LE
Sbjct:   10 MDATTLKMESSMEAGGESSRCHGHYSTTAESQHQWDAVKNRRALVHSQLQQWGEELLKLLKLADCSDVSVQ--LDMSDLQLRTKLREAATAFADAKCQGDQLE 110          
BLAST of jgi.p|Trimin1|354509 vs. uniprot
Match: A0A835Z9F0_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9F0_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 3.280e-7
Identity = 25/26 (96.15%), Postives = 25/26 (96.15%), Query Frame = 0
Query:  198 RPYDSCTYGTKAQDDVKVPVWCLTFA 223
            RPYDSCT GTKAQDDVKVPVWCLTFA
Sbjct:    9 RPYDSCTNGTKAQDDVKVPVWCLTFA 34          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|354509 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A835YSF1_9STRA4.240e-142100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZGW1_9STRA2.690e-10196.95Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CGY8_9STRA2.680e-5077.42Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z351_9STRA1.860e-1451.46Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z9F0_9STRA3.280e-796.15Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 104..138

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_258contigContig_258:105474..106746 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|354509mRNA_18076Tribonema minus UTEX_B_3156 mRNAContig_258 105354..106746 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|354509|estExt_Genemark1.C_Ctg_2580014 ID=Trimin1|354509|estExt_Genemark1.C_Ctg_2580014|Name=jgi.p|Trimin1|354509|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=230bp
MDATTLKLRSRMEAGGESLPYHCHLHGMFQHKRHEHVAKRALIESQLWAW
GEPMLDVLDLAGCSGVSVTEVLGMHDFELHSKLREAATAFRETKYRALRL
EAALEAAYSKKKLLQARIAELESKLQQVQQLLQRELATVSTQVELAPVCS
ASTQVELAPVCSVSTQVQLHEALTAAPAAAPSSTRAGNKGARGGGDIRPY
DSCTYGTKAQDDVKVPVWCLTFAYNIRIG*
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