Trimin1|348461|estExt_Genemark1.C_Ctg_250018 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|348461
Unique NameTrimin1|348461|estExt_Genemark1.C_Ctg_250018
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length337
Homology
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BLAST of jgi.p|Trimin1|348461 vs. uniprot
Match: A0A836CG61_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG61_9STRA)

HSP 1 Score: 461 bits (1187), Expect = 7.800e-161
Identity = 336/336 (100.00%), Postives = 336/336 (100.00%), Query Frame = 0 
Query:    1 MEKPMWERARITCGATKSGASSWRAADAHRAHARATALAELTLHGGDGSEDDSRSQSEASGVDGALQGAAAARGARGSPHSSNLGGRSVRSLSRMLLRQVRKAAAAAALIVGGFATRRACAMAESDTDGSAGATGNASSGIALAGGASSDGSAARAMSRATLTSPSSXXXXXXXGTSLAEALAQLDGMHAGQQRSATGGSIPQSPTIDVAAANAXXXXXXXXXXXXXXXXXXXXXAQQEKDRRGDGKAQSPSGVSTRSSLSRKQHRWRSETSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGASRGTRVLIKSEQDETAGWYSAEAAGRG 336
            MEKPMWERARITCGATKSGASSWRAADAHRAHARATALAELTLHGGDGSEDDSRSQSEASGVDGALQGAAAARGARGSPHSSNLGGRSVRSLSRMLLRQVRKAAAAAALIVGGFATRRACAMAESDTDGSAGATGNASSGIALAGGASSDGSAARAMSRATLTSPSSXXXXXXXGTSLAEALAQLDGMHAGQQRSATGGSIPQSPTIDVAAANAXXXXXXXXXXXXXXXXXXXXXAQQEKDRRGDGKAQSPSGVSTRSSLSRKQHRWRSETSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGASRGTRVLIKSEQDETAGWYSAEAAGRG
Sbjct:    1 MEKPMWERARITCGATKSGASSWRAADAHRAHARATALAELTLHGGDGSEDDSRSQSEASGVDGALQGAAAARGARGSPHSSNLGGRSVRSLSRMLLRQVRKAAAAAALIVGGFATRRACAMAESDTDGSAGATGNASSGIALAGGASSDGSAARAMSRATLTSPSSXXXXXXXGTSLAEALAQLDGMHAGQQRSATGGSIPQSPTIDVAAANAXXXXXXXXXXXXXXXXXXXXXAQQEKDRRGDGKAQSPSGVSTRSSLSRKQHRWRSETSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGASRGTRVLIKSEQDETAGWYSAEAAGRG 336
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348461 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A836CG61_9STRA7.800e-161100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 155..336
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 190..207
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 155..179
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 40..87

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_25contigContig_25:213294..216538 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348461mRNA_6615Tribonema minus UTEX_B_3156 mRNAContig_25 213294..216731 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|348461|estExt_Genemark1.C_Ctg_250018 ID=Trimin1|348461|estExt_Genemark1.C_Ctg_250018|Name=jgi.p|Trimin1|348461|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=337bp
MEKPMWERARITCGATKSGASSWRAADAHRAHARATALAELTLHGGDGSE
DDSRSQSEASGVDGALQGAAAARGARGSPHSSNLGGRSVRSLSRMLLRQV
RKAAAAAALIVGGFATRRACAMAESDTDGSAGATGNASSGIALAGGASSD
GSAARAMSRATLTSPSSGGGRSSRGTSLAEALAQLDGMHAGQQRSATGGS
IPQSPTIDVAAANAAAAGGASGGALTASALAAADAAQQEKDRRGDGKAQS
PSGVSTRSSLSRKQHRWRSETSSAAGGGGQEVLRRWRRRGGRRSSRGDDA
AAAQRRRGASRGTRVLIKSEQDETAGWYSAEAAGRG*
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