mRNA_6601 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|348454
Unique NamemRNA_6601
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|348454 vs. uniprot
Match: A0A836CF87_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF87_9STRA)

HSP 1 Score: 907 bits (2344), Expect = 0.000e+0
Identity = 640/640 (100.00%), Postives = 640/640 (100.00%), Query Frame = 1
Query:   88 MPNPPQLCLSTTGAGGQAVAWLLGVPGASATLLEATVPYSPLSGRQWMGGAAAAPTSLCSEEAAIAMAREAYKRALQLTVAERGLARAAAACALGVGATAAVASTRPKRGDHRWDGGGARCVRGAGVPVHACLVAVGVVVIDQAYVGAACALGVGATAALASTQPKRGDHRCHVAACGAAGTTLYSLTLAKGRRDRAGEDAVVSRLVLRAVLEPPEAFLRAALLLDXXXXXXXXSAPQPPEAVPAARHTAPPDALDRLLAGHIGQVLVLPGGANGEVDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQMMFPELPVPAPALVFPGSFNPLHNGHVALVQAAQACYARTQADSSAGSXXXXXXXXXGSDAAAAAHHPLPVLFELSVANADKGALPRAELLRRVAQFAGGGGATLGAQYAVALTAAPLFLQKARLFPGCVFVVGVDTVRRILDPKYYADGDAAEMAAALAEIKYLGCRIIVGGRVQQAASPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRFETLSDVLRDSPLPQSLRGMFIGLEEDDFRVDLSSTELRAKAAAXXXXXXAAAMRRVSADDGALPHER 2007
            MPNPPQLCLSTTGAGGQAVAWLLGVPGASATLLEATVPYSPLSGRQWMGGAAAAPTSLCSEEAAIAMAREAYKRALQLTVAERGLARAAAACALGVGATAAVASTRPKRGDHRWDGGGARCVRGAGVPVHACLVAVGVVVIDQAYVGAACALGVGATAALASTQPKRGDHRCHVAACGAAGTTLYSLTLAKGRRDRAGEDAVVSRLVLRAVLEPPEAFLRAALLLDXXXXXXXXSAPQPPEAVPAARHTAPPDALDRLLAGHIGQVLVLPGGANGEVDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQMMFPELPVPAPALVFPGSFNPLHNGHVALVQAAQACYARTQADSSAGSXXXXXXXXXGSDAAAAAHHPLPVLFELSVANADKGALPRAELLRRVAQFAGGGGATLGAQYAVALTAAPLFLQKARLFPGCVFVVGVDTVRRILDPKYYADGDAAEMAAALAEIKYLGCRIIVGGRVQQAASPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRFETLSDVLRDSPLPQSLRGMFIGLEEDDFRVDLSSTELRAKAAAXXXXXXAAAMRRVSADDGALPHER
Sbjct:    1 MPNPPQLCLSTTGAGGQAVAWLLGVPGASATLLEATVPYSPLSGRQWMGGAAAAPTSLCSEEAAIAMAREAYKRALQLTVAERGLARAAAACALGVGATAAVASTRPKRGDHRWDGGGARCVRGAGVPVHACLVAVGVVVIDQAYVGAACALGVGATAALASTQPKRGDHRCHVAACGAAGTTLYSLTLAKGRRDRAGEDAVVSRLVLRAVLEPPEAFLRAALLLDXXXXXXXXSAPQPPEAVPAARHTAPPDALDRLLAGHIGQVLVLPGGANGEVDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQMMFPELPVPAPALVFPGSFNPLHNGHVALVQAAQACYARTQADSSAGSXXXXXXXXXGSDAAAAAHHPLPVLFELSVANADKGALPRAELLRRVAQFAGGGGATLGAQYAVALTAAPLFLQKARLFPGCVFVVGVDTVRRILDPKYYADGDAAEMAAALAEIKYLGCRIIVGGRVQQAASPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRFETLSDVLRDSPLPQSLRGMFIGLEEDDFRVDLSSTELRAKAAAXXXXXXAAAMRRVSADDGALPHER 640          
BLAST of jgi.p|Trimin1|348454 vs. uniprot
Match: A0A6H5J5Q6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J5Q6_9PHAE)

HSP 1 Score: 251 bits (641), Expect = 4.840e-70
Identity = 223/697 (31.99%), Postives = 291/697 (41.75%), Query Frame = 1
Query:   46 VPPDVHALLSELYSMPNPPQLCLSTTGAGGQAVAWLLGVPGASATLLEATVPYSPLSGRQWMGGAAAAPTSLCSEEAAIAMAREAYKRALQLTVAERGLARAAAACALGVGATAAVASTRPKRGDHRWDGGGARCVRGAGVPVHACLVAVGVVVIDQAYVGAACALGVGATAALASTQPKRGDHRCHVAACGAAGTTLYSLTLAKGRRDRAGEDAVVSRLVLRAVLEP-----PEAFLRAALLLDXXXXXXXXSAPQPP----------------------EAVPAARHTAPPDALDRLLAGHIGQVLVLPGGANGEVDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQMMFPELPVPAPALVFPGSFNPLHNGHVALVQAAQACYART---------------QADSSA------GSXXXXXXXXXGSDAAAAAHHPLPV-----------------------LFELSVANADKGALPRAELLRRVAQFAGGGGATLGAQYAVALTAAPLFLQKARLFPGCVFVVGVDTVRRILDPKYYADGDAAEMAAALAEIKYLGCRIIVGGRVQQAASPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRFETLSDVLRDSPLPQSLRGMFIGLEEDDFRVDLSSTELRA 1923
            VP D  AL+  +Y     PQ+C+ST GAGGQA++WLLGVPGASA LLEATVPY   +    M   + AP   CS EAA  +AR+AY RA+ L VAE                        P RG H                          V+ D+  +       VG TAA+ S++P+RG H+C+V A  A G   Y LTL+KGRRDR+GEDA VSRL+L+A+ +      P  F    LLLD        S  +                        E VP A     PDA++ L+AG  G  LV+P    G  + A                                                                     M     +    ++ PGS+NPLH GHV L++AA++                     AD +A      G          G+ AA+A      +                       +FE+SV+N DKG L   E+ RRV QF+  GG  +G  Y VA+T APLF +KARLFPGC FVVG DT +RI+DP+YY +    EM +AL+EI++LGC  IVGGR                                                 RF TL +V+ +S LP+SLR MF+GL+E  FR DLSS+ +RA
Sbjct:  124 VPDDASALIRAVYDSKPTPQVCVSTAGAGGQAISWLLGVPGASACLLEATVPYCFKAFEDRMAAGSRAP-GYCSREAAEGLARKAYARAVSLCVAES-----------------------PDRGPH--------------------------VLPDRRVIA------VGCTAAVLSSKPRRGPHQCYVCAQTADGLAHYELTLSKGRRDRSGEDAAVSRLLLQAIADAVGVPVPFGFKADHLLLDGGGGGDLPSVHEEEGVEAGRGEATAAAGEAEAVVSAEVVPTADLAHDPDAIEELVAGRCGTALVVPRDTRGATNEAGEAGAPVVVLREGA-------------------------------------------------------MVRAALLRGATVILPGSYNPLHRGHVGLLEAARSLLDAEINGESRRGETPQKPPAADKAAAGWGREGEQGVQTDEGMGAGAASAXXXXXXLDVDAGGGDVGDEEREKKRTAVHGIFEISVSNVDKGGLGVEEIQRRVMQFSEPGG--VGWPYPVAVTKAPLFSEKARLFPGCAFVVGADTAKRIIDPRYYGNSQV-EMVSALSEIRHLGCSFIVGGREDVGG--------------------------------------------RFLTLDEVIAESGLPESLRSMFLGLDESSFREDLSSSSIRA 662          
BLAST of jgi.p|Trimin1|348454 vs. uniprot
Match: A0A7S2DDP4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DDP4_9STRA)

HSP 1 Score: 193 bits (490), Expect = 2.000e-50
Identity = 188/630 (29.84%), Postives = 249/630 (39.52%), Query Frame = 1
Query:   46 VPPDVHALLSELYSMPNPPQLCLSTTGAGGQAVAWLLGVPGASATLLEATVPYSPLSGRQWMGGAAAAPTSLCSEEAAIAMAREAYKRALQLTVAERGLARAAAACALGVGATAAVASTRPKRGDHRWDGGGARCVRGAGVPVHACLVAVGVVVIDQAYVGAACALGVGATAALASTQPKRGDHRCHVAACGAAGTTLYSLTLAKGRRDRAGEDAVVSRLVLRAVLE----PPEAFLRAALLLDXXXXXXXXSAPQPPEAVPAARHTAPPDALDRLLAGHIGQVLVLPGGANGEVDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQMMFPELPVPA-PALVFPGSFNPLHNGHVALVQAAQACYARTQADSSAGSXXXXXXXXXGSDAAAAAHHPLPVLFELSVANADKGALPRAELLRRVAQFAGGGGATLGAQYAVALTAAPLFLQKARLFPGCVFVVGVDTVRRILDPKYYADGDAAEMAAALAEIKYLGCRIIVGGRVQQAASPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRFETLSDVLRDSPLPQSLRGMFIGLEEDDFRVDLSSTELR 1920
            VP DV   +  LY+MP P ++ +  TGAG  A +WLLGVPGASA++LE  VPY+  S  +++GG    P   C EE A+AMA +AY+RAL L + +                                  G   CV G                           +GV  T A+ S+ PKRG+HR HVAA  A GTT Y+L LAKG RDR GE+ V SRLV+RA+ E    P      A  LL+              E V     T    AL +LL+  +  VLVLP G+                                                                                  +PA  +++ PGSFNP+H GHV + + AQ     T A +             G      A    P++ E+S  NADK  +    +  RV      G        AVA+T APLF  KA++FP  +FVVG DT RRI+D KYY  G  A +  AL  I++ GC  IV GR +                                                F TL  +L+ S LP +L+ +F  LE  DFR+D+SST++R
Sbjct:   45 VPADVTQTIRNLYAMPKPARIYIVATGAGSTAGSWLLGVPGASASVLEMCVPYAKASLAKFLGGE---PKHFCCEETAVAMAEKAYERALHLWMMDND--------------------------------GNPHCVGGENF------------------------MGVSITGAIVSSTPKRGEHRVHVAAKTALGTTTYTLCLAKGERDRVGEEHVASRLVIRAIAEAAQTPVSDEFSACSLLEG-------------EVVQGPIFTPTSSALQKLLSSKLSNVLVLPLGSMPSTPQGPGAATTATALEIADF------------------------------------------------------------IPARKSILVPGSFNPIHQGHVEMAKKAQQQVILTAAAA-------------GEAEDGDAGITPPIILEISAFNADKPTIGYDAVADRVRLIQKAG-------LAVAVTNAPLFSDKAKMFPNSLFVVGADTARRIIDKKYYG-GTEAGVVLALGYIRHQGCGFIVAGRKET--------------------------------------------DDEFLTLPMILQGSTLPPALQSLFTELE--DFRLDISSTDIR 475          
BLAST of jgi.p|Trimin1|348454 vs. uniprot
Match: A0A6N8YWS7_9CHLR (CTP_transf_like domain-containing protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A6N8YWS7_9CHLR)

HSP 1 Score: 149 bits (376), Expect = 1.040e-35
Identity = 173/622 (27.81%), Postives = 235/622 (37.78%), Query Frame = 1
Query:   55 DVHALLSELYSMPNPPQLCLSTTGAGGQAVAWLLGVPGASATLLEATVPYSPLSGRQWMGGAAAAPTSLCSEEAAIAMAREAYKRALQLTVAERGLARAAAACALGVGATAAVASTRPKRGDHRWDGGGARCVRGAGVPVHACLVAVGVVVIDQAYVGAACALGVGATAALASTQPKRGDHRCHVAACGAAGTTLYSLTLAKGRRDRAGEDAVVSRLVLRAVLEPPEAFLRAALLLDXXXXXXXXSAPQPPEAVPAARHTAPPDALDRLLAGHIGQVLVLPGGANGEVDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQMMFPELPVPAPALVFPGSFNPLHNGHVALVQAAQACYARTQADSSAGSXXXXXXXXXGSDAAAAAHHPLPVLFELSVANADKGALPRAELLRRVAQFAGGGGATLGAQYAVALTAAPLFLQKARLFPGCVFVVGVDTVRRILDPKYYADGDAAEMAAALAEIKYLGCRIIVGGRVQQAASPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRFETLSDVLRDSPLPQSLRGMFIGLEEDDFRVDLSSTELR 1920
            ++  ++++++  P+  +  L   GAG  A++WLLGV GAS T+LE  VPY  LS    +G     P+   SE+ A AMA  AY R + L                                  R D                          D   VG AC      TA +A+ +PKRGDHR  +A      T   +L + KG+RDR GE+ +VSRL+++A+         A             +A + PE V +A H +P   + RLL G   +V ++  G  G++ A                                                                               PA V PGSFNPLH GH+ L   A+A                      G D          +++EL+V N DK  L   E+LRR+A    GGGA       VALT  P F  KAR+FPG VFV+G DT+ R++DPKYY  G  A+M  ALAEI   GCR +V GR  Q +                                             F TL +V     +PQ  + +F  + ED FR D+SSTELR
Sbjct:    4 NIERVITQMHDTPH--KSVLVVAGAGSSAMSWLLGVSGASRTILETLVPYGRLSMIDLVGEE---PSQYVSEQNARAMAYAAYCRGMDL----------------------------------RED--------------------------DSPVVGVAC------TATIATDRPKRGDHRACIATWDERRTFGCNLVIDKGKRDRTGEEELVSRLLIQAM---------ARSFGVESEFEIGFTAAESPE-VTSANHDSP---VQRLLRG---EVDLVKAGLEGKLSAVESGKHE------------------------------------------------------------------------PAAVLPGSFNPLHEGHMRLAAVARAM--------------------TGMD----------LVYELAVLNVDKPPLEEEEVLRRIAGI--GGGAP------VALTRTPTFRLKARIFPGSVFVIGWDTMVRLIDPKYYG-GSEADMLTALAEIWAQGCRFLVAGRENQGS---------------------------------------------FRTLDEVA----VPQGFQPLFQAIPEDKFRADISSTELR 378          
BLAST of jgi.p|Trimin1|348454 vs. uniprot
Match: A0A7S3XRD4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XRD4_HETAK)

HSP 1 Score: 146 bits (368), Expect = 1.490e-34
Identity = 97/261 (37.16%), Postives = 129/261 (49.43%), Query Frame = 1
Query: 1150 PVPAPALVFPGSFNPLHNGHVALVQAAQACYARTQADSSAGSXXXXXXXXXGSDAAAAAHHPLPVLFELSVANADKGALPRAELLRRVAQFAGGGGATLGAQYAVALTAAPLFLQKARLFPGCVFVVGVDTVRRILDPKYYADGDAAEMAAALAEIKYLGCRIIVGGRVQQAASPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRFETLSDVLRDSPLPQSLRGMFIGLEEDDFRVDLSSTELRAKAA 1932
            P P   +V+PGS+NPLH GH++L++ A+A  A                    + A A    P   +FE++  NADK  L R  L  R+ QF     +T    +AV +T  PLF++KARLFP C FVVG DT  R++DPKYY +GD  EM  AL+EI  LGCR +VGGR  +                                               F T+  VLR+  LPQ ++ MF G+ E+ FR+D+SSTELR KAA
Sbjct:  156 PFPPGTIVYPGSYNPLHEGHLSLMRTARALAA--------------------AGARAEGRPPPAAVFEIAAFNADKPPLARPALEARLQQFTN---STPETSWAVVVTKVPLFIEKARLFPNCTFVVGADTATRLIDPKYY-NGDPLEMINALSEIAVLGCRFVVGGRRVEGRG--------------------------------------------FLTVDHVLREQRLPQKIKNMFYGIVEEAFRMDISSTELRQKAA 348          
BLAST of jgi.p|Trimin1|348454 vs. uniprot
Match: A0A7R9YBG6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBG6_9STRA)

HSP 1 Score: 146 bits (369), Expect = 2.370e-34
Identity = 104/271 (38.38%), Postives = 130/271 (47.97%), Query Frame = 1
Query: 1147 LPVPAPALVFPGSFNPLHNGHVALVQAAQACYARTQADSSAGSXXXXXXXXXGSDAAAAAHHPLPVLFELSVANADKGALPRAELLRRVAQFAGGGGATLGA-------------QYAVALTAAPLFLQKARLFPGCVFVVGVDTVRRILDPKYYADGDAAEMAAALAEIKYLGCRIIVGGRVQQAASPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRFETLSDVLRDSPLPQSLRGMFIGLEEDDFRVDLSSTELR 1920
            +P+P   LVFPGSFNPLH GHV +   A+A  +R  A+                         LP+L+E++  NADKGA+P   + RRV QF+    A   +             + AVA+T+ PLF QKA LFPG VF+VG DT +RI+DPKYY D D   M AA+AE+   GC  IVGGR     S                                            FE   DVL D+ LP+ LR MF  L ED+FRVD+SSTELR
Sbjct:  227 MPLPCKCLVFPGSFNPLHGGHVRM---AEAAVSRWMAEKK---------------------QVLPILYEITAFNADKGAIPLETVQRRVEQFSAAVAAEEDSDAAESIRVGPEKVRAAVAVTSVPLFSQKAELFPGSVFLVGADTAKRIVDPKYYGD-DHENMVAAIAELYAKGCSFIVGGRTTGNGS--------------------------------------------FELAEDVLDDAALPRHLREMFWTLSEDEFRVDVSSTELR 428          
BLAST of jgi.p|Trimin1|348454 vs. uniprot
Match: A0A6L7PZ14_9CHLR (CTP_transf_like domain-containing protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A6L7PZ14_9CHLR)

HSP 1 Score: 144 bits (364), Expect = 4.120e-34
Identity = 155/532 (29.14%), Postives = 205/532 (38.53%), Query Frame = 1
Query:   58 VHALLSELYSMPNPPQLCLSTTGAGGQAVAWLLGVPGASATLLEATVPYSPLSGRQWMGGAAAAPTSLCSEEAAIAMAREAYKRALQLTVAERGLARAAAACALGVGATAAVASTRPKRGDHRWDGGGARCVRGAGVPVHACLVAVGVVVIDQAYVGAACALGVGATAALASTQPKRGDHRCHVAACGAAGTTLYSLTLAKGRRDRAGEDAVVSRLVLRAVLEPPEAFLRAALLLDXXXXXXXXSAPQPPEAVPAARHTAPPDALDRLLAGHIGQVLVLPGGANGEVDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQMMFPELPVPAPALVFPGSFNPLHNGHVALVQAAQACYARTQADSSAGSXXXXXXXXXGSDAAAAAHHPLPVLFELSVANADKGALPRAELLRRVAQFAGGGGATLGAQYAVALTAAPLFLQKARLFPGCVFVVGVDTVRRILDPKYYADGDAAEMAAALAEIKYLGCRIIVGGR 1653
            + A+++ +++ P+  Q  ++  GAG  A+AWLLGV GAS T+LE  +PY  L+   ++ G A  P    S + A  MAR A++R L L                             + GD                P+                      +G+G TA +A+ + KRGDHR ++A    AG T  +LTL KG R+RAGE+ VVSRLV+ A        L  A  +D        S+ Q       ARH  P   + RLL G    V + P G+   VDA                                                                               P  + PGSFNPLH GHV L  AA A  A                               PV +ELSV N DK  L   E+ RR+ QF G G         V LT A  F +KA+LFPGC FV+G DT  R++ P+YY D ++A M  ALAE+   G R  V GR
Sbjct:    5 IAAVVASIHNTPH--QAVVAVAGAGNYALAWLLGVGGASRTVLETRIPYGYLAMTDFLAGYA--PEQTVSADTARRMARSAWQRGLAL-----------------------------REGD---------------API----------------------VGLGCTATIATDRTKRGDHRAYIATWDDAGVTTDALTLEKGLRERAGEEDVVSRLVIAA--------LARACTVDAEIDLRLASSEQ--LTTETARHADP---VQRLLDGDARWVTIHPDGSMA-VDADP-----------------------------------------------------------------------------PQALLPGSFNPLHPGHVELAAAASAALAA------------------------------PVAYELSVVNVDKPPLAVDEVQRRIQQFQGVG--------TVVLTGAETFYKKAQLFPGCGFVIGWDTATRLIQPRYYNDSESA-MLTALAEMWASGSRFAVAGR 336          
BLAST of jgi.p|Trimin1|348454 vs. uniprot
Match: A0A7S0IFP8_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0IFP8_MICPS)

HSP 1 Score: 140 bits (354), Expect = 2.840e-32
Identity = 133/385 (34.55%), Postives = 171/385 (44.42%), Query Frame = 1
Query:  541 LGVGATAALASTQPKRGDHRCHVAACGAAGTTLYSLTLAKGRRDRAGEDAVVSRLVLRAVLEPPEAFLRAALLLDXXXXXXXXSAPQPPEAVPAARHTAPPDALDRLLA--GHIGQVLVLPGGANGEVDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQMMFPELPVPAPALVFPGSFNPLHNGHVALVQAAQACYARTQADSSAGSXXXXXXXXXGSDAAAAAHHPLPVLFELSVANADKGALPRAELLRRVAQFAGGG---GATLGAQYA----VALTAAPLFLQKARLFPGCVFVVGVDTVRRILDPKYYADGDAAEMAAALAEIKYLGCRIIVGGRVQQAA 1668
            +G+G T ALAS  PKRG+HRCHVA  GA G   Y LT+ KGRRDR  ED + S LV++A+ +             XXXXX    + +P + V   R   P D  +R     G   + L+   G   E DA+                                                                          P+P  A+V PGSFNPLH+GH ++++AA A                      GS          PV +EL+V NADKG LP AE+ RRVAQFAG G   GA+  A+ +    + LT APL+ QKA L PG  FV+G DT  R+L+PKYY  G   EM AAL  ++  GC  +V GRV+Q A
Sbjct:  102 VGLGCTCALASQPPKRGEHRCHVATFGARGFAEYHLTMEKGRRDRWEEDGLASALVVQALADAXXXXXXXXXXXXXXXXXHRQPSVKPDDVV-TGRVVPPGDVFERTRTPLGDPLEYLISGDGDVVEFDASSGVCTAVGVA----------------------------------------------------------------PLPNRAVVLPGSFNPLHDGHRSMLRAALAT------------------RPPGST---------PV-YELAVTNADKGTLPTAEVRRRVAQFAGVGDDSGASDEAESSSHPRLWLTRAPLYSQKAALMPGATFVLGYDTAVRLLNPKYY--GGEGEMRAALRTMRASGCTFVVAGRVEQGA 391          
BLAST of jgi.p|Trimin1|348454 vs. uniprot
Match: A0A6T6T7R1_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A6T6T7R1_9EUKA)

HSP 1 Score: 141 bits (355), Expect = 3.910e-32
Identity = 156/613 (25.45%), Postives = 232/613 (37.85%), Query Frame = 1
Query:  103 QLCLSTTGAGGQAVAWLLGVPGASATLLEATVPYSPLSGRQWMGGAAAAPTSLCSEEAAIAMAREAYKRALQLTVAERGLARAAAACALGVGATAAVASTRPKRGDHRWDGGGARCVRGAGVPVHACLVAVGVVVIDQAYVGAACALGVGATAALASTQPKRGDHRCHVAACGAAGTTLYSLTLAKGRRDRAGEDAVVSRLVLRAVLEPPEAFLRAALLLDXXXXXXXXSAPQPPEAVPAARHTAPPDALDRLLAGHIGQVLVLPGGANGEVDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQMMFPELPVPAPALVFPGSFNPLHNGHVALVQAAQACYARTQADSSAGSXXXXXXXXXGSDAAAAAHHPLPVLFELSVANADKGALPRAELLRRVAQF---AGGGGATLGAQYAVALTAAPLFLQKARLFPGCVFVVGVDTVRRILDPKYYADGDAAEMAAALAEIKYLGCRIIVGGRVQQAASPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRFETLSDVLR--DSPLPQSLRGMFIGLEEDDFRVDLSSTELRAK 1926
            ++ ++TTG+GG+A+A L  VPG S+ + E  VPY+  S  Q++G A        S+E AI +AR A++R+++++                          RP+                                          ++G+G TAA+ ST+PK+GDH+ +VA C      +  L +AK  R+R  ED  V+ L++R   E       + LL          S P+  + +           + R+L+G     L LP       D                                                                       + P     A  L++PGSFNPLH GH+ L +AA                         S AA      + ++FE+SV+NADK  + + E+L RV+QF   A   G T  + + VA+T A  F+ KA+LFPGC FVVG DT  RI+DPKYY D +   M   L  +   G R  VG RV +                                                +T+ D L+  D  +   L+ MF+ + E DFR+DLSSTE+R+K
Sbjct:   70 KMVIATTGSGGEAIAQLCQVPGMSSLIQEMIVPYAEESSEQFVGSAV---KKWVSKEMAIELARAAHRRSVEISAKSPDF----------------FTKPRPR------------------------------------------SIGLGCTAAVVSTRPKKGDHQAYVATCDDLKIRVCRLVMAKNMRNRQEEDRCVAALIIRMASEAITGDTESYLLRQLKQNT---SVPKITDVIEGPNEAPRQTPVQRVLSGECSFALFLPNEKVAYCDTR---------------------------------------------------------------------LSPSSSNDALTLLYPGSFNPLHEGHLVLAKAAI------------------------SRAAKETDRKINLIFEISVSNADKATIDQKEILSRVSQFSSQASEDGKTFES-FPVAITTAKYFVDKAKLFPGCWFVVGADTAIRIIDPKYY-DSNKWNMFRVLCGLYESGVRFTVGVRVDKHGKLLTT-----------------------------------------QTILDELKALDEVIYDGLKHMFVDIPEKDFRLDLSSTEIRSK 482          
BLAST of jgi.p|Trimin1|348454 vs. uniprot
Match: A5UTC4_ROSS1 (Uncharacterized protein n=1 Tax=Roseiflexus sp. (strain RS-1) TaxID=357808 RepID=A5UTC4_ROSS1)

HSP 1 Score: 137 bits (346), Expect = 1.220e-31
Identity = 149/475 (31.37%), Postives = 180/475 (37.89%), Query Frame = 1
Query:  526 GAACALGVGATAALASTQPKRGDHRCHVAACGAAGTTLYSLTLAKGRRDRAGEDAVVSRLVLRAVLE-----PPEAFLRAALLLDXXXXXXXXSAPQPPEAVPAARHTAPPDALDRLLAGHIGQVLVLPGGANGEVDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQMMFPELPVPAPALVFPGSFNPLHNGHVALVQAAQACYARTQADSSAGSXXXXXXXXXGSDAAAAAHHPLPVLFELSVANADKGALPRAELLRRVAQFAGGGGATLGAQYAVALTAAPLFLQKARLFPGCVFVVGVDTVRRILDPKYYADGDAAEMAAALAEIKYLGCRIIVGGRVQQAASPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRFETLSDVLRDSPLPQSLRGMFIGLEEDDFRVDLSSTELRAKAAA 1935
            GAA  LGV  TAA+A+ + KRGDH C VA    A   +  LTLAKG RDRAGE+A++S L++RA+ E     PP      AL L+            P E V      A PD L  LL G I  V V   G +G +                                                                                 PA +  GSFNPLH GH  L QAA                                    PV FEL V NADK  L   EL RR+ QF G        +Y V LT APLF+QKA LFPGC FV+G DT  RI+DP+YY DG+A    AA A I    C  +V GRV+                                                F TL+D+     +P +LR +F  L E  FR+DLSST +R  +AA
Sbjct:   90 GAAPCLGVACTAAIATDRVKRGDHGCSVAVYDGATLRVSRLTLAKGARDRAGEEALISLLIIRAIAEACGVAPP------ALALE------------PSETV-EVEEEASPDPLMLLLNGDIAAVFV---GKDGRICREGAP---------------------------------------------------------------------------PAALLSGSFNPLHAGHEYLAQAAAVVLDT------------------------------PVTFELPVLNADKPPLRYIELERRLDQFRG--------RYPVVLTRAPLFVQKADLFPGCTFVIGYDTALRIIDPRYY-DGEAGR-DAAFARIAAQRCTFLVAGRVRDGI---------------------------------------------FRTLADI----DMPPALRPLFRELPERLFRIDLSSTAIRNASAA 378          
BLAST of jgi.p|Trimin1|348454 vs. uniprot
Match: A0A836CI39_9STRA (GRIP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI39_9STRA)

HSP 1 Score: 1294 bits (3349), Expect = 0.000e+0
Identity = 1240/1240 (100.00%), Postives = 1240/1240 (100.00%), Query Frame = 1
Query:    1 MFKNFGDVFSVLDLDQLADEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFASPASATQPQSLLGDTLTGFWSTPTRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAATEDGWEEWDDGATVPDSKPVDITAAAAAHAPPPAPETPKATPAMPLPSPRPPAXXXXXXXXXXXXXXXXXXXXXXAEMKAKLDTALGTLRRLKGVVLQREGELAEAARAAERSAQGRAELQAECAQLQRALSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDKPAGADRDEPTCADAEQQPQGTECEAQSLAARLAAAEAXXXXXXXXXXXXXXXXXXXXXRAAVMGAALEEAAESAQLAXXXXXXXXXXXXXXXXXXXXESAEQMHEYALAAAAEAAAADALAHAAAMEAVEGRLAAADEEARQXXXXXAGAAECMRRLEGQSTDGMKLLDVVDCCSACSAAGKAELDESQELSAQLLRELGSERTAAEEAQRTLEQQVAAALRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASLAQRAADAQARVAALEQELXXXXXXXXXXXXXRSWSVARVHYGSECVCGGTAIVLGANAPCWRKARARVAALGRELQGATDRKQQLEAQLSQYKLRSVEALRKFTAQAAELSAARNALEDEADALRAAAAEAQRAAQFGHRAEAAAATSNFHSVFAMILPDALTQAAAXXXXXXXAQEDLGRAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQCAQLQARVLELEXXXXXXXXXXXXXXXXXXXXXXXEAAALAQRLGSPAPASPSAANGYFSSXXXXXXXXXXXXXXXXXXXXXASGSVTPSADGGAXXXXXXXXXXXXXXXXXXXXDAFGAGNGVRADGDVVSSGYGAAXXXXXXXXXXXXXXXXXXDPSMTKLRASSSFAGSVDGXXXSSIDGSEHGRRAXXXXXXXXQQLWNVHTPRRSLPGSFSIGGGGGATLAAAAGAASIGEDGGDXXXXXXXXXXXXRALAREXXXXDAEAAHAQEGDDAARRAQLFLVDQLQEARRRDQARAQALTRELEGALRALEAAQATESTLKNKLEKFENGVRREEVLHKSPSAHVNLEYLKAAVVRYMQSDEPSEHSRLLPVIATILQLSTSEQQAVATSIKRRSSASAVLPFSWFPAGGPGKT 3720
            MFKNFGDVFSVLDLDQLADEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFASPASATQPQSLLGDTLTGFWSTPTRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAATEDGWEEWDDGATVPDSKPVDITAAAAAHAPPPAPETPKATPAMPLPSPRPPAXXXXXXXXXXXXXXXXXXXXXXAEMKAKLDTALGTLRRLKGVVLQREGELAEAARAAERSAQGRAELQAECAQLQRALSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDKPAGADRDEPTCADAEQQPQGTECEAQSLAARLAAAEAXXXXXXXXXXXXXXXXXXXXXRAAVMGAALEEAAESAQLAXXXXXXXXXXXXXXXXXXXXESAEQMHEYALAAAAEAAAADALAHAAAMEAVEGRLAAADEEARQXXXXXAGAAECMRRLEGQSTDGMKLLDVVDCCSACSAAGKAELDESQELSAQLLRELGSERTAAEEAQRTLEQQVAAALRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASLAQRAADAQARVAALEQELXXXXXXXXXXXXXRSWSVARVHYGSECVCGGTAIVLGANAPCWRKARARVAALGRELQGATDRKQQLEAQLSQYKLRSVEALRKFTAQAAELSAARNALEDEADALRAAAAEAQRAAQFGHRAEAAAATSNFHSVFAMILPDALTQAAAXXXXXXXAQEDLGRAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQCAQLQARVLELEXXXXXXXXXXXXXXXXXXXXXXXEAAALAQRLGSPAPASPSAANGYFSSXXXXXXXXXXXXXXXXXXXXXASGSVTPSADGGAXXXXXXXXXXXXXXXXXXXXDAFGAGNGVRADGDVVSSGYGAAXXXXXXXXXXXXXXXXXXDPSMTKLRASSSFAGSVDGXXXSSIDGSEHGRRAXXXXXXXXQQLWNVHTPRRSLPGSFSIGGGGGATLAAAAGAASIGEDGGDXXXXXXXXXXXXRALAREXXXXDAEAAHAQEGDDAARRAQLFLVDQLQEARRRDQARAQALTRELEGALRALEAAQATESTLKNKLEKFENGVRREEVLHKSPSAHVNLEYLKAAVVRYMQSDEPSEHSRLLPVIATILQLSTSEQQAVATSIKRRSSASAVLPFSWFPAGGPGKT
Sbjct:    1 MFKNFGDVFSVLDLDQLADEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFASPASATQPQSLLGDTLTGFWSTPTRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAATEDGWEEWDDGATVPDSKPVDITAAAAAHAPPPAPETPKATPAMPLPSPRPPAXXXXXXXXXXXXXXXXXXXXXXAEMKAKLDTALGTLRRLKGVVLQREGELAEAARAAERSAQGRAELQAECAQLQRALSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDKPAGADRDEPTCADAEQQPQGTECEAQSLAARLAAAEAXXXXXXXXXXXXXXXXXXXXXRAAVMGAALEEAAESAQLAXXXXXXXXXXXXXXXXXXXXESAEQMHEYALAAAAEAAAADALAHAAAMEAVEGRLAAADEEARQXXXXXAGAAECMRRLEGQSTDGMKLLDVVDCCSACSAAGKAELDESQELSAQLLRELGSERTAAEEAQRTLEQQVAAALRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASLAQRAADAQARVAALEQELXXXXXXXXXXXXXRSWSVARVHYGSECVCGGTAIVLGANAPCWRKARARVAALGRELQGATDRKQQLEAQLSQYKLRSVEALRKFTAQAAELSAARNALEDEADALRAAAAEAQRAAQFGHRAEAAAATSNFHSVFAMILPDALTQAAAXXXXXXXAQEDLGRAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQCAQLQARVLELEXXXXXXXXXXXXXXXXXXXXXXXEAAALAQRLGSPAPASPSAANGYFSSXXXXXXXXXXXXXXXXXXXXXASGSVTPSADGGAXXXXXXXXXXXXXXXXXXXXDAFGAGNGVRADGDVVSSGYGAAXXXXXXXXXXXXXXXXXXDPSMTKLRASSSFAGSVDGXXXSSIDGSEHGRRAXXXXXXXXQQLWNVHTPRRSLPGSFSIGGGGGATLAAAAGAASIGEDGGDXXXXXXXXXXXXRALAREXXXXDAEAAHAQEGDDAARRAQLFLVDQLQEARRRDQARAQALTRELEGALRALEAAQATESTLKNKLEKFENGVRREEVLHKSPSAHVNLEYLKAAVVRYMQSDEPSEHSRLLPVIATILQLSTSEQQAVATSIKRRSSASAVLPFSWFPAGGPGKT 1240          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348454 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CF87_9STRA0.000e+0100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5J5Q6_9PHAE4.840e-7031.99Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2DDP4_9STRA2.000e-5029.84Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A6N8YWS7_9CHLR1.040e-3527.81CTP_transf_like domain-containing protein n=1 Tax=... [more]
A0A7S3XRD4_HETAK1.490e-3437.16Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7R9YBG6_9STRA2.370e-3438.38Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A6L7PZ14_9CHLR4.120e-3429.14CTP_transf_like domain-containing protein n=1 Tax=... [more]
A0A7S0IFP8_MICPS2.840e-3234.55Hypothetical protein n=1 Tax=Micromonas pusilla Ta... [more]
A0A6T6T7R1_9EUKA3.910e-3225.45Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
A5UTC4_ROSS11.220e-3131.37Uncharacterized protein n=1 Tax=Roseiflexus sp. (s... [more]

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BLAST of jgi.p|Trimin1|348454 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A836CI39_9STRA0.000e+0100.00GRIP domain-containing protein n=1 Tax=Tribonema m... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_25contigContig_25:104899..111511 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|348454|estExt_Genemark1.C_Ctg_250006
Max annot lvl2759|Eukaryota
EggNOG OGs28KTS@1|root,2QTA1@2759|Eukaryota
Evalue2.82e-68
Seed ortholog2880.D8LCX0
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionnucleotidyltransferase
Ec32 orthologEc-07_007220.1
TranscriptId348776
TrackFilteredModels1
ProteinId348454
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348454gene_6601Tribonema minus UTEX_B_3156 geneContig_25 104899..111511 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348454Trimin1|348454|estExt_Genemark1.C_Ctg_250006Tribonema minus UTEX_B_3156 polypeptideContig_25 105038..111424 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_6601_7exon_6601_7Tribonema minus UTEX_B_3156 exonContig_25 104899..105169 -
exon_6601_6exon_6601_6Tribonema minus UTEX_B_3156 exonContig_25 106083..106394 -
exon_6601_5exon_6601_5Tribonema minus UTEX_B_3156 exonContig_25 107376..107708 -
exon_6601_4exon_6601_4Tribonema minus UTEX_B_3156 exonContig_25 108173..108679 -
exon_6601_3exon_6601_3Tribonema minus UTEX_B_3156 exonContig_25 108962..109088 -
exon_6601_2exon_6601_2Tribonema minus UTEX_B_3156 exonContig_25 110019..110444 -
exon_6601_1exon_6601_1Tribonema minus UTEX_B_3156 exonContig_25 111339..111511 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_6601UTR3_6601Tribonema minus UTEX_B_3156 three_prime_UTRContig_25 104899..105037 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_6601CDS_6601Tribonema minus UTEX_B_3156 CDSContig_25 111339..111424 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR5_6601UTR5_6601Tribonema minus UTEX_B_3156 five_prime_UTRContig_25 111425..111511 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_6601 ID=mRNA_6601|Name=jgi.p|Trimin1|348454|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2149bp|location=Sequence derived from alignment at Contig_25:104899..111511- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
CGATCATCGACATCACAGGAACATAGCAGCGGCGGCGGCTCGGCGGTGCC
TCCAGATGTGCATGCGCTGCTGTCTGAGCTATATTCGATGCCAAATCCCC
CACAGCTGTGCCTGTCCACTACTGGCGCGGGGGGGCAAGCCGTGGCCTGG
CTGCTGGGGGTGCCTGGAGCAAGCGCGACTCTGCTCGAGGCGACCGTCCC
CTACTCCCCGCTGTCGGGGCGCCAGTGGATGGGCGGCGCCGCCGCCGCGC
CAACGAGCCTGTGCTCGGAGGAGGCGGCGATAGCGATGGCGCGCGAGGCG
TACAAGCGCGCGCTGCAGCTGACGGTCGCGGAGCGCGGGCTCGCGCGCGC
GGCGGCGGCGTGCGCGCTCGGCGTGGGCGCGACAGCCGCCGTCGCCAGCA
CGCGGCCGAAGCGCGGCGACCACAGGTGGGACGGGGGGGGGGCGCGTTGC
GTGCGCGGCGCGGGGGTTCCGGTACACGCCTGTCTGGTGGCTGTTGGGGT
TGTCGTCATTGATCAAGCTTACGTGGGAGCAGCGTGCGCGCTCGGCGTGG
GCGCGACGGCGGCCCTCGCCAGCACGCAGCCGAAGCGCGGCGACCACAGG
TGCCACGTGGCAGCATGTGGCGCGGCGGGCACAACGCTGTACTCGCTGAC
GCTCGCCAAGGGACGGCGCGACCGTGCGGGCGAGGACGCCGTCGTGAGCC
GCCTGGTGCTGCGCGCCGTGTTGGAGCCGCCGGAGGCCTTCCTGCGCGCG
GCGCTGCTGCTCGATGGCGGCGGCGCCAGCAGCAGCGGCAGCGCGCCGCA
GCCGCCCGAGGCCGTCCCCGCCGCGCGGCACACGGCGCCGCCGGACGCCC
TCGACCGCCTCCTCGCGGGGCACATCGGCCAGGTGCTGGTGCTGCCGGGC
GGCGCCAACGGCGAGGTCGACGCGGCGGCGGCGGCGACGGCGGAGGACGC
GGCGGCAGCGGCGGCGGCGGCGGATGATGCGGCGGCGGCGGATGCGGAGG
GGGCGGCGCGGGGCGGGGGGGAGCCGTCGGCGGCGGACGCAGCGGCGGCA
CGGTTACGGTCGGCAGGCAGCGGGGAGCAGGCGCGCAGAGCGGAAGGGGG
GGCAGCGGCGGCGGCGGGCGGCGGCGTGCAGATGATGTTCCCGGAGCTGC
CGGTGCCGGCGCCGGCGCTCGTGTTTCCCGGGTCGTTCAACCCGCTGCAC
AACGGGCACGTGGCGCTCGTGCAGGCGGCGCAGGCGTGCTACGCGCGCAC
GCAGGCGGACAGCAGCGCCGGCAGCAGCGGCGGCGGCGGCAGCGCCGACG
TCGGCAGCGACGCCGCCGCAGCCGCGCACCACCCCCTCCCTGTCCTCTTC
GAGCTCTCGGTCGCCAACGCGGACAAGGGCGCGCTGCCGCGCGCGGAGCT
GCTGCGGCGCGTCGCGCAGTTCGCCGGCGGCGGCGGCGCGACGCTCGGCG
CGCAGTACGCCGTCGCGCTCACCGCGGCGCCGCTGTTCCTGCAGAAGGCG
CGTCTGTTCCCGGGGTGCGTCTTCGTGGTCGGCGTCGACACGGTGCGGCG
CATACTGGACCCGAAGTACTACGCGGACGGCGACGCCGCGGAGATGGCCG
CGGCGCTGGCCGAGATCAAGTACCTCGGGTGCCGCATCATCGTGGGCGGG
CGCGTGCAGCAGGCGGCGTCGCCGCAGGCATCAGCGGCTCAGCAGCAGCA
GCAGCGGCAGCAGAATGGCTTCGACGAGCAGCAGCACGCGCCGCAGGAGG
CGCCGCCGCAGCAGCAGCAGCAGCAGCCGCGGCAGCAGCAGCGGCGCCAG
CGGTTCGAGACGCTGTCCGACGTGCTGCGCGACTCGCCGCTGCCGCAGAG
CCTGCGCGGCATGTTCATTGGCCTGGAGGAAGACGACTTCCGCGTCGACC
TGAGCTCCACGGAGCTCCGCGCCAAGGCCGCGGCCGCGGCGGCGCGGAAG
CGCGCCGCCGCCATGCGGCGCGTCTCCGCCGACGACGGCGCGCTGCCGCA
CGAGCGGTGACGCTGCGGCGCGCGGTTTGTAGCATCATGGCATTTTATCG
TCAGTGGCGCGACGTCGTGCGTGCGCACGCAGGGGCTGCGTATTACAGTG
AGCATTATGATGGCTTGGCGATGCGTACATGGCACCTCGTAATATGATA
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protein sequence of jgi.p|Trimin1|348454

>Trimin1|348454|estExt_Genemark1.C_Ctg_250006 ID=Trimin1|348454|estExt_Genemark1.C_Ctg_250006|Name=jgi.p|Trimin1|348454|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=641bp
MPNPPQLCLSTTGAGGQAVAWLLGVPGASATLLEATVPYSPLSGRQWMGG
AAAAPTSLCSEEAAIAMAREAYKRALQLTVAERGLARAAAACALGVGATA
AVASTRPKRGDHRWDGGGARCVRGAGVPVHACLVAVGVVVIDQAYVGAAC
ALGVGATAALASTQPKRGDHRCHVAACGAAGTTLYSLTLAKGRRDRAGED
AVVSRLVLRAVLEPPEAFLRAALLLDGGGASSSGSAPQPPEAVPAARHTA
PPDALDRLLAGHIGQVLVLPGGANGEVDAAAAATAEDAAAAAAAADDAAA
ADAEGAARGGGEPSAADAAAARLRSAGSGEQARRAEGGAAAAAGGGVQMM
FPELPVPAPALVFPGSFNPLHNGHVALVQAAQACYARTQADSSAGSSGGG
GSADVGSDAAAAAHHPLPVLFELSVANADKGALPRAELLRRVAQFAGGGG
ATLGAQYAVALTAAPLFLQKARLFPGCVFVVGVDTVRRILDPKYYADGDA
AEMAAALAEIKYLGCRIIVGGRVQQAASPQASAAQQQQQRQQNGFDEQQH
APQEAPPQQQQQQPRQQQRRQRFETLSDVLRDSPLPQSLRGMFIGLEEDD
FRVDLSSTELRAKAAAAAARKRAAAMRRVSADDGALPHER*
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mRNA from alignment at Contig_25:104899..111511-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_6601 ID=mRNA_6601|Name=jgi.p|Trimin1|348454|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=6613bp|location=Sequence derived from alignment at Contig_25:104899..111511- (Tribonema minus UTEX_B_3156 )
CGATCATCGACATCACAGGAACATAGCAGCGGCGGCGGCTCGGCGGTGCC TCCAGATGTGCATGCGCTGCTGTCTGAGCTATATTCGATGCCAAATCCCC CACAGCTGTGCCTGTCCACTACTGGCGCGGGGGGGCAAGCCGTGGCCTGG CTGCTGGGGGTGCCTGGAGCAAGGTTAGACTCTCAAACATAATAGTCACA GTCGGATCGAAACACTCACTGGCGCGCTTTAATCGGATGCAGGTGACGTG TCGCTGCTGCTTGCTGCTGAACAACCACCCTCACAACGTGAATTTAGGAA TAATCAATACTTCAAGTTCAGAATAGGCATGCTGAGCTGCAAGGCATATC GAGTGACTGTGCTATATTAATCAACGCTGTGATTCAGCTTGTCATGTGCA GCAGTGTGCTATTAAGCACCAAGTTGGTGCGCAGCCAGAGCGTCAGCTCA ATGATGTGCCTTGTCTTGTGTACTGCTGACGCATCCGTGCACACGCATTT CTTCGTTGTGCTCATTACAACCGTAGTAAAGTGCTGACGCATCTATGCAC ACGCCATTCCGTCGGTGTGCTCATTGCAATCGAGTAATTATCGCTGTCCA TGCAAATGCGCTGCAAATGCTGCCTGAGTCTGTGATCTGGATCTGCTGCG ATGGCGGCGCAGTGCTGTGCTTAAGTTAGACGGCGTCTTGTAGAAGTCGT GCACCTAGCCGCAGGCTGACTCTGTTCTGAAGCCCAGCACACAACTGGCT GCACAAAGCTCTCAGCCCAGTCATGAATGCTGCCTGCATGAATATGCAGA ACTCTTTGGCTTGTCCTTCTCTTTCAGCTCACATCAATCCGACATGGACA CCAGTTTTCTTTGGCGTTCGACCTTAGAAGCTGTCCGCGCTGGCATCAAG CATCACAACGCATCAGAGGGACCTTCTGCGCTGGTCATCCACCCAATAAC CCCCACCTCCCTCTCACTCATTCAGCACTCGATCGCCCCCTTCAAACCCA CCCCAACGTGCAATGCCACCCCCCCCTTACCCCCTTGTACCCATCCCCCC CCCCCCCCCCCTCCCAGCGCGACTCTGCTCGAGGCGACCGTCCCCTACTC CCCGCTGTCGGGGCGCCAGTGGATGGGCGGCGCCGCCGCCGCGCCAACGA GCCTGTGCTCGGAGGAGGCGGCGATAGCGATGGCGCGCGAGGCGTACAAG CGCGCGCTGCAGCTGACGGTCGCGGAGCGCGGGCTCGCGCGCGCGGCGGC GGCGTGCGCGCTCGGCGTGGGCGCGACAGCCGCCGTCGCCAGCACGCGGC CGAAGCGCGGCGACCACAGGTGGGACGGGGGGGGGGCGCGTTGCGTGCGC GGCGCGGGGGTTCCGGTACACGCCTGTCTGGTGGCTGTTGGGGTTGTCGT CATTGATCAAGCTTACGTGGGAGCAGCGTGCGCGCTCGGCGTGGGCGCGA CGGCGGCCCTCGCCAGCACGCAGCCGAAGCGCGGCGACCACAGGTGGGAG GGGCGGGGGGGGGGGGGGGGGGGGCGAGGTTGCGCACACGCGGCGAAGCT TTCATTCACAAGCTTGCATTTGGCTCACAGCAGCAGTAGTAGCAGCACCT CTCCAGCACACCGACACACGGCGGGGCCCGGTGCGCGCCTCTCTGGTGGC TGGCAGGGTTGTGGTGCGAGCTTCTGGGGGAGCGGTTGCCGTACTGGTCA CCGCCGCCGTCAGCACCGGAGTGGTGCGAGCTTCTGCGAGCGGGTGTTTT GCGGGGGCCGTGCCGGTTGTCGCCACCATCAGCAGCAGGCGCAGCCTGGT GATGTTCTGGTTTCGCAGAGAGCGGGCGTCATTGCGTGAGGGGTCTGCCG TCGTGCGCTGTCGCGTTGGATCTCTCGTTGCGGACCACCGAATGATCGTG CAGCGCAACGCAGCTGGCATCAGCGCTCAGGTGCAGCGGCACGCGACGCT GATCTCGACGGCGCAGCGCCTGATGGCCTTTTCTTTTGCCTAATTGCGCC TGTACACGGTGCTGCCTAACAGGGTCTGTGCTGAGCACGTGCCCGCATGG CACACCTGTGGCTTCTGTGTACCGCGCCGCCGCGCCTGAGACGCAGATGT GCCTGCGCGGGCACTCAGGACCCGCGCACCCTGGCCCCGTGTCAAAATTT TACTTAAACCCTAACCTCAACGCTGACGCACGTGACCTGCAATGCATCGC GTGCGGGGCCCCCGTGCAGCAAGGCGTCGCAGTCACATACGACAAAGAGG GGAGCTGACGCCGCGCGTGAGCTAAACCAATCGATCGGAATTTGTTCAGC AGCACGACGAGAGATGCACAGCGCATCAGAGACACCGCCATCACCATGCC TACCTACACCATGACTTTGTGGCTGCGACGCCGCACGTGACCGACTCGCG CCATGTATGTATGTATCGTGCAGGTGCCACGTGGCAGCATGTGGCGCGGC GGGCACAACGCTGTACTCGCTGACGCTCGCCAAGGGACGGCGCGACCGTG CGGGCGAGGACGCCGTCGTGAGCCGCCTGGTGCTGCGCGCCGTGTTGGAG GTACGCATGGTACTGATGCTGTTACTGATGTCTACAAGCTGACGCAATTA GTCTATGTGTTGTGGGATTTTTTGTGACTGTATGCATGCGGTGTTGCACG GCGTTGTGGAGCCGGTGACAGTTGGTGTTTCCATGCTGCTTGAGGGTTCA TGTCACTCCTACACTGGGGCAGCCGAAGTCTGCCCTGTTTGAATCCTAGC AAGGGCTTATGGCAGCAAGCAACAACAACAATCATTGACGCTGCTGCGCT GCCCCAACACCGCGTAGGCTGCTGGCCTGCAGCCGCCGGAGGCCTTCCTG CGCGCGGCGCTGCTGCTCGATGGCGGCGGCGCCAGCAGCAGCGGCAGCGC GCCGCAGCCGCCCGAGGCCGTCCCCGCCGCGCGGCACACGGCGCCGCCGG ACGCCCTCGACCGCCTCCTCGCGGGGCACATCGGCCAGGTGCTGGTGCTG CCGGGCGGCGCCAACGGCGAGGTCGACGCGGCGGCGGCGGCGACGGCGGA GGACGCGGCGGCAGCGGCGGCGGCGGCGGATGATGCGGCGGCGGCGGATG CGGAGGGGGCGGCGCGGGGCGGGGGGGAGCCGTCGGCGGCGGACGCAGCG GCGGCACGGTTACGGTCGGCAGGCAGCGGGGAGCAGGCGCGCAGAGCGGA AGGGGGGGCAGCGGCGGCGGCGGGCGGCGGCGTGCAGATGATGTTCCCGG AGCTGCCGGTGCCGGCGCCGGCGCTCGTGTTTCCCGGGTCGTTCAACCCG CTGCACAACGGGCACGTGGCGCTCGTGCAGGCGGCGCAGGTGCGCTTGCT TACGCGCCGTGGAGCGTCACAACTGTTTGCTCAGCGTGCGCTTTACTTCA GTGTCAAAGCAGTTCACCCAGTGTTCGCATTAGACAGTCTGAGCACAGGC ACGAACTTTGCGAACGCAGCTGGCACCGTCAAATAGCGGCTGCCGGCTGG TGGCGTGGGGAAGTTGCGTTGCACTTCGTCGTGGCGCATGCAGCACCCAC ACTCCGCCTTGATTAACTAGCACGCTGCATGTTGCAGGCGTGTGACTCAG TGTGTCCGCCGCCAGTGGCACCTGAGCAGCTCTACTGAACGGCCGGCACC AACGCTGGCACCTGTTGCACTTGTACCTTTTGCAACTATGGTTAGGTGTC GCTCAATGTGGTTTCCGGCTCTGTCCGCGCTCAGCGCACTGTCCGGTCAA AGTTCACGTACCACGCCTGACGCCGCTGTGCGTCGCGTGCCCGCCCCCCG CAGGCGTGCTACGCGCGCACGCAGGCGGACAGCAGCGCCGGCAGCAGCGG CGGCGGCGGCAGCGCCGACGTCGGCAGCGACGCCGCCGCAGCCGCGCACC ACCCCCTCCCTGTCCTCTTCGAGCTCTCGGTCGCCAACGCGGACAAGGGC GCGCTGCCGCGCGCGGAGCTGCTGCGGCGCGTCGCGCAGTTCGCCGGCGG CGGCGGCGCGACGCTCGGCGCGCAGTACGCCGTCGCGCTCACCGCGGCGC CGCTGTTCCTGCAGAAGGCGCGTCTGTTCCCGGGGTGCGTCTTCGTGGTC GGCGTCGACACGGTGCGGCGCATACTGGACCCGAAGGTGAGGGGAGGAGC GCGCGCGCGAGAGAGAGAGAGAAAGGGGGGGAATGGCCGTCGACATGAGG CGCGTTGTCTGGCATGTGATTTGGCGGGGGGCGCTGCGGGGGGCTCGCCA GTTTCCCGTGCGCGTGTCAAATGGGCGTCGGCACAATGCGGTGCGTGCTT GGAACGCGATAGCGTGAGCTGCAGATGGTGGTGGTGTGCACAGACTCCTT GCGCAGGGGGAGGTTGCGCACACAACAACCCGTCACAACGATACTCTGAT CCAGGGACTCGATGTACGCCTTATACACGCATACGTGCTGTGTGAAACGT GCAGCGCGCGCGCTTCAAGTACTATCTCGCTGCTATTCCTGGTATGCCCA AGTACCGGTTTGAGGCACAAAAAATGGTGTTTGTGGCACGCGCAAGCTCT TAAGCGTTTCTTGTTGCCCACAGCTGCCAACAGCAAGCCTGGCGCATGAT CAGCCGCCCATGAAATGGGTAAGCTGCAAGTCAGTTCTCGCCGCCGCTGG CGGCGGGCACCTCTCGCTTTTTCTCGCGCGCAAATTCAAATGAACGCTCT CATCATGCCGCCGCCACCGGCTCGCACAAGGCGGTTCGCAGCGCCGTGCT GCGCGGCCATCGCAATGCGGCTTGCGCCACGCGGGCGGCGACCGCACCGA TGCGCTGACGTGCACGCCCCTGCTGCCCCGCTCGCATGGCACGCCCCGCC GCCGCATGCTGTTAGTAGTAGACGCCCAAAAGCTTGCACACAGAAGTCTT TTGACTACTGTGGATATGGTGGCACTGTTTGACCCGTGGCCAACTGCCGC AGCGGCGGCGACCACGGACGCTGGTGGAAGGCATTCAGTTTGACGGCTAT ACCTTGTCAGCTAGAGCTCTACGAGCTTTTGATTCGGTTCCATTAGGTCT TTGTGAACACCTCGAAAGTGTCTCAATGCGCGTTGCCGATCACTTCTGAA CGCCATCGCCGTACCAGTACTACGCGGACGGCGACGCCGCGGAGATGGCC GCGGCGCTGGCCGAGATCAAGTACCTCGGGTGCCGCATCATCGTGGGCGG GCGCGTGCAGCAGGCGGCGTCGCCGCAGGCATCAGCGGCTCAGCAGCAGC AGCAGCGGCAGCAGAATGGCTTCGACGAGCAGCAGCACGCGCCGCAGGAG GCGCCGCCGCAGCAGCAGCAGCAGCAGCCGCGGCAGCAGCAGCGGCGCCA GCGGTTCGAGACGCTGTCCGACGTGCTGCGCGACTCGCCGCTGCCGCAGA GCCTGCGCGGCATGTTCATTGGCCTGGAGGTACGTTGCGCAGAATGTCGA AGCGTCCTGCGGAACGGATTTTTGTGGAAACGTCATGCGGAATGAGGATA GCGAGCTGCTCCTCAGCTTGCACCGCCAGCCTCGGCTGCGCGCTGCTTTC ATCTCCCGCTGCGAGGCCAGCCTGTGTACGAGTTGCTCAAAACGTGTGCT CACAACAAGCTCTACAGGCGCCGTTTCTTGCGACACTCTATTACTGGTCC ATCACGACACGAACCAGAAATTGCGGTAGCCTCGCCAATACATGTGCGCA TCATATCAACAGGATGCCAAAACCTCTGACGCGCGACTAAACATCATGTC ACAAAAGCCCCTTCTGGCGATCTGCAGTGCTATACTGCCAGCTCTGCCCA GAACCACCCGGCGTGAGAATTTGCTGTGTTGCGGAGCAGCTCCACGTTCA TGGAGTGAACTGCGCGCGCGCTTCAAAGTAATACGCAAGGCGCCATATTA TACTTCCATATATGCGTCTACATATTTGTTGTGCGCCTAGGTATTGTCTA TACACTGCATCTCCAGGTGTCACGCCTGGTGTAGTGGTACCAAGATAAAG TGTATCGACAACACCTGGGCACACGTATCGCCAGCCGCATTGCCACACTG CCCCGCAGGACCCGGGACCTGGTTTACGAGCCCGTCTGAGCCCCGCACAG CTGCACGCCGCCGCCGCTGAGGGCTTCATCCGCTTGCGTACGTCAGCGAA CGCCGAGTCAGCATCAATGTTTTCATGCGTCCACCGGCTCTCAATGCAAT CGCATGCCTGTTGGACACAGTGTAGCGTATTGCATGCGCCAGCATCGACA ACAGCGGGACGCACTGCAGTTCTCTACACACGAGCACCCCCCGCATGGGA CACGTGCCTCATCGCCCCCCCCCCTTCCCCCTGCCCTCTCAGGAAGACGA CTTCCGCGTCGACCTGAGCTCCACGGAGCTCCGCGCCAAGGCCGCGGCCG CGGCGGCGCGGAAGCGCGCCGCCGCCATGCGGCGCGTCTCCGCCGACGAC GGCGCGCTGCCGCACGAGCGGTGACGCTGCGGCGCGCGGTTTGTAGCATC ATGGCATTTTATCGTCAGTGGCGCGACGTCGTGCGTGCGCACGCAGGGGC TGCGTATTACAGTGAGCATTATGATGGCTTGGCGATGCGTACATGGCACC TCGTAATATGATA
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Coding sequence (CDS) from alignment at Contig_25:104899..111511-

>mRNA_6601 ID=mRNA_6601|Name=jgi.p|Trimin1|348454|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1923bp|location=Sequence derived from alignment at Contig_25:104899..111511- (Tribonema minus UTEX_B_3156 )
ATGCCAAATCCCCCACAGCTGTGCCTGTCCACTACTGGCGCGGGGGGGCA
AGCCGTGGCCTGGCTGCTGGGGGTGCCTGGAGCAAGCGCGACTCTGCTCG
AGGCGACCGTCCCCTACTCCCCGCTGTCGGGGCGCCAGTGGATGGGCGGC
GCCGCCGCCGCGCCAACGAGCCTGTGCTCGGAGGAGGCGGCGATAGCGAT
GGCGCGCGAGGCGTACAAGCGCGCGCTGCAGCTGACGGTCGCGGAGCGCG
GGCTCGCGCGCGCGGCGGCGGCGTGCGCGCTCGGCGTGGGCGCGACAGCC
GCCGTCGCCAGCACGCGGCCGAAGCGCGGCGACCACAGGTGGGACGGGGG
GGGGGCGCGTTGCGTGCGCGGCGCGGGGGTTCCGGTACACGCCTGTCTGG
TGGCTGTTGGGGTTGTCGTCATTGATCAAGCTTACGTGGGAGCAGCGTGC
GCGCTCGGCGTGGGCGCGACGGCGGCCCTCGCCAGCACGCAGCCGAAGCG
CGGCGACCACAGGTGCCACGTGGCAGCATGTGGCGCGGCGGGCACAACGC
TGTACTCGCTGACGCTCGCCAAGGGACGGCGCGACCGTGCGGGCGAGGAC
GCCGTCGTGAGCCGCCTGGTGCTGCGCGCCGTGTTGGAGCCGCCGGAGGC
CTTCCTGCGCGCGGCGCTGCTGCTCGATGGCGGCGGCGCCAGCAGCAGCG
GCAGCGCGCCGCAGCCGCCCGAGGCCGTCCCCGCCGCGCGGCACACGGCG
CCGCCGGACGCCCTCGACCGCCTCCTCGCGGGGCACATCGGCCAGGTGCT
GGTGCTGCCGGGCGGCGCCAACGGCGAGGTCGACGCGGCGGCGGCGGCGA
CGGCGGAGGACGCGGCGGCAGCGGCGGCGGCGGCGGATGATGCGGCGGCG
GCGGATGCGGAGGGGGCGGCGCGGGGCGGGGGGGAGCCGTCGGCGGCGGA
CGCAGCGGCGGCACGGTTACGGTCGGCAGGCAGCGGGGAGCAGGCGCGCA
GAGCGGAAGGGGGGGCAGCGGCGGCGGCGGGCGGCGGCGTGCAGATGATG
TTCCCGGAGCTGCCGGTGCCGGCGCCGGCGCTCGTGTTTCCCGGGTCGTT
CAACCCGCTGCACAACGGGCACGTGGCGCTCGTGCAGGCGGCGCAGGCGT
GCTACGCGCGCACGCAGGCGGACAGCAGCGCCGGCAGCAGCGGCGGCGGC
GGCAGCGCCGACGTCGGCAGCGACGCCGCCGCAGCCGCGCACCACCCCCT
CCCTGTCCTCTTCGAGCTCTCGGTCGCCAACGCGGACAAGGGCGCGCTGC
CGCGCGCGGAGCTGCTGCGGCGCGTCGCGCAGTTCGCCGGCGGCGGCGGC
GCGACGCTCGGCGCGCAGTACGCCGTCGCGCTCACCGCGGCGCCGCTGTT
CCTGCAGAAGGCGCGTCTGTTCCCGGGGTGCGTCTTCGTGGTCGGCGTCG
ACACGGTGCGGCGCATACTGGACCCGAAGTACTACGCGGACGGCGACGCC
GCGGAGATGGCCGCGGCGCTGGCCGAGATCAAGTACCTCGGGTGCCGCAT
CATCGTGGGCGGGCGCGTGCAGCAGGCGGCGTCGCCGCAGGCATCAGCGG
CTCAGCAGCAGCAGCAGCGGCAGCAGAATGGCTTCGACGAGCAGCAGCAC
GCGCCGCAGGAGGCGCCGCCGCAGCAGCAGCAGCAGCAGCCGCGGCAGCA
GCAGCGGCGCCAGCGGTTCGAGACGCTGTCCGACGTGCTGCGCGACTCGC
CGCTGCCGCAGAGCCTGCGCGGCATGTTCATTGGCCTGGAGGAAGACGAC
TTCCGCGTCGACCTGAGCTCCACGGAGCTCCGCGCCAAGGCCGCGGCCGC
GGCGGCGCGGAAGCGCGCCGCCGCCATGCGGCGCGTCTCCGCCGACGACG
GCGCGCTGCCGCACGAGCGGTGA
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