mRNA_6601 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|348454 vs. uniprot
Match: A0A836CF87_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF87_9STRA) HSP 1 Score: 907 bits (2344), Expect = 0.000e+0 Identity = 640/640 (100.00%), Postives = 640/640 (100.00%), Query Frame = 1 Query: 88 MPNPPQLCLSTTGAGGQAVAWLLGVPGASATLLEATVPYSPLSGRQWMGGAAAAPTSLCSEEAAIAMAREAYKRALQLTVAERGLARAAAACALGVGATAAVASTRPKRGDHRWDGGGARCVRGAGVPVHACLVAVGVVVIDQAYVGAACALGVGATAALASTQPKRGDHRCHVAACGAAGTTLYSLTLAKGRRDRAGEDAVVSRLVLRAVLEPPEAFLRAALLLDXXXXXXXXSAPQPPEAVPAARHTAPPDALDRLLAGHIGQVLVLPGGANGEVDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQMMFPELPVPAPALVFPGSFNPLHNGHVALVQAAQACYARTQADSSAGSXXXXXXXXXGSDAAAAAHHPLPVLFELSVANADKGALPRAELLRRVAQFAGGGGATLGAQYAVALTAAPLFLQKARLFPGCVFVVGVDTVRRILDPKYYADGDAAEMAAALAEIKYLGCRIIVGGRVQQAASPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRFETLSDVLRDSPLPQSLRGMFIGLEEDDFRVDLSSTELRAKAAAXXXXXXAAAMRRVSADDGALPHER 2007 MPNPPQLCLSTTGAGGQAVAWLLGVPGASATLLEATVPYSPLSGRQWMGGAAAAPTSLCSEEAAIAMAREAYKRALQLTVAERGLARAAAACALGVGATAAVASTRPKRGDHRWDGGGARCVRGAGVPVHACLVAVGVVVIDQAYVGAACALGVGATAALASTQPKRGDHRCHVAACGAAGTTLYSLTLAKGRRDRAGEDAVVSRLVLRAVLEPPEAFLRAALLLDXXXXXXXXSAPQPPEAVPAARHTAPPDALDRLLAGHIGQVLVLPGGANGEVDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQMMFPELPVPAPALVFPGSFNPLHNGHVALVQAAQACYARTQADSSAGSXXXXXXXXXGSDAAAAAHHPLPVLFELSVANADKGALPRAELLRRVAQFAGGGGATLGAQYAVALTAAPLFLQKARLFPGCVFVVGVDTVRRILDPKYYADGDAAEMAAALAEIKYLGCRIIVGGRVQQAASPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRFETLSDVLRDSPLPQSLRGMFIGLEEDDFRVDLSSTELRAKAAAXXXXXXAAAMRRVSADDGALPHER Sbjct: 1 MPNPPQLCLSTTGAGGQAVAWLLGVPGASATLLEATVPYSPLSGRQWMGGAAAAPTSLCSEEAAIAMAREAYKRALQLTVAERGLARAAAACALGVGATAAVASTRPKRGDHRWDGGGARCVRGAGVPVHACLVAVGVVVIDQAYVGAACALGVGATAALASTQPKRGDHRCHVAACGAAGTTLYSLTLAKGRRDRAGEDAVVSRLVLRAVLEPPEAFLRAALLLDXXXXXXXXSAPQPPEAVPAARHTAPPDALDRLLAGHIGQVLVLPGGANGEVDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQMMFPELPVPAPALVFPGSFNPLHNGHVALVQAAQACYARTQADSSAGSXXXXXXXXXGSDAAAAAHHPLPVLFELSVANADKGALPRAELLRRVAQFAGGGGATLGAQYAVALTAAPLFLQKARLFPGCVFVVGVDTVRRILDPKYYADGDAAEMAAALAEIKYLGCRIIVGGRVQQAASPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRFETLSDVLRDSPLPQSLRGMFIGLEEDDFRVDLSSTELRAKAAAXXXXXXAAAMRRVSADDGALPHER 640
BLAST of jgi.p|Trimin1|348454 vs. uniprot
Match: A0A6H5J5Q6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J5Q6_9PHAE) HSP 1 Score: 251 bits (641), Expect = 4.840e-70 Identity = 223/697 (31.99%), Postives = 291/697 (41.75%), Query Frame = 1 Query: 46 VPPDVHALLSELYSMPNPPQLCLSTTGAGGQAVAWLLGVPGASATLLEATVPYSPLSGRQWMGGAAAAPTSLCSEEAAIAMAREAYKRALQLTVAERGLARAAAACALGVGATAAVASTRPKRGDHRWDGGGARCVRGAGVPVHACLVAVGVVVIDQAYVGAACALGVGATAALASTQPKRGDHRCHVAACGAAGTTLYSLTLAKGRRDRAGEDAVVSRLVLRAVLEP-----PEAFLRAALLLDXXXXXXXXSAPQPP----------------------EAVPAARHTAPPDALDRLLAGHIGQVLVLPGGANGEVDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQMMFPELPVPAPALVFPGSFNPLHNGHVALVQAAQACYART---------------QADSSA------GSXXXXXXXXXGSDAAAAAHHPLPV-----------------------LFELSVANADKGALPRAELLRRVAQFAGGGGATLGAQYAVALTAAPLFLQKARLFPGCVFVVGVDTVRRILDPKYYADGDAAEMAAALAEIKYLGCRIIVGGRVQQAASPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRFETLSDVLRDSPLPQSLRGMFIGLEEDDFRVDLSSTELRA 1923 VP D AL+ +Y PQ+C+ST GAGGQA++WLLGVPGASA LLEATVPY + M + AP CS EAA +AR+AY RA+ L VAE P RG H V+ D+ + VG TAA+ S++P+RG H+C+V A A G Y LTL+KGRRDR+GEDA VSRL+L+A+ + P F LLLD S + E VP A PDA++ L+AG G LV+P G + A M + ++ PGS+NPLH GHV L++AA++ AD +A G G+ AA+A + +FE+SV+N DKG L E+ RRV QF+ GG +G Y VA+T APLF +KARLFPGC FVVG DT +RI+DP+YY + EM +AL+EI++LGC IVGGR RF TL +V+ +S LP+SLR MF+GL+E FR DLSS+ +RA Sbjct: 124 VPDDASALIRAVYDSKPTPQVCVSTAGAGGQAISWLLGVPGASACLLEATVPYCFKAFEDRMAAGSRAP-GYCSREAAEGLARKAYARAVSLCVAES-----------------------PDRGPH--------------------------VLPDRRVIA------VGCTAAVLSSKPRRGPHQCYVCAQTADGLAHYELTLSKGRRDRSGEDAAVSRLLLQAIADAVGVPVPFGFKADHLLLDGGGGGDLPSVHEEEGVEAGRGEATAAAGEAEAVVSAEVVPTADLAHDPDAIEELVAGRCGTALVVPRDTRGATNEAGEAGAPVVVLREGA-------------------------------------------------------MVRAALLRGATVILPGSYNPLHRGHVGLLEAARSLLDAEINGESRRGETPQKPPAADKAAAGWGREGEQGVQTDEGMGAGAASAXXXXXXLDVDAGGGDVGDEEREKKRTAVHGIFEISVSNVDKGGLGVEEIQRRVMQFSEPGG--VGWPYPVAVTKAPLFSEKARLFPGCAFVVGADTAKRIIDPRYYGNSQV-EMVSALSEIRHLGCSFIVGGREDVGG--------------------------------------------RFLTLDEVIAESGLPESLRSMFLGLDESSFREDLSSSSIRA 662
BLAST of jgi.p|Trimin1|348454 vs. uniprot
Match: A0A7S2DDP4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DDP4_9STRA) HSP 1 Score: 193 bits (490), Expect = 2.000e-50 Identity = 188/630 (29.84%), Postives = 249/630 (39.52%), Query Frame = 1 Query: 46 VPPDVHALLSELYSMPNPPQLCLSTTGAGGQAVAWLLGVPGASATLLEATVPYSPLSGRQWMGGAAAAPTSLCSEEAAIAMAREAYKRALQLTVAERGLARAAAACALGVGATAAVASTRPKRGDHRWDGGGARCVRGAGVPVHACLVAVGVVVIDQAYVGAACALGVGATAALASTQPKRGDHRCHVAACGAAGTTLYSLTLAKGRRDRAGEDAVVSRLVLRAVLE----PPEAFLRAALLLDXXXXXXXXSAPQPPEAVPAARHTAPPDALDRLLAGHIGQVLVLPGGANGEVDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQMMFPELPVPA-PALVFPGSFNPLHNGHVALVQAAQACYARTQADSSAGSXXXXXXXXXGSDAAAAAHHPLPVLFELSVANADKGALPRAELLRRVAQFAGGGGATLGAQYAVALTAAPLFLQKARLFPGCVFVVGVDTVRRILDPKYYADGDAAEMAAALAEIKYLGCRIIVGGRVQQAASPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRFETLSDVLRDSPLPQSLRGMFIGLEEDDFRVDLSSTELR 1920 VP DV + LY+MP P ++ + TGAG A +WLLGVPGASA++LE VPY+ S +++GG P C EE A+AMA +AY+RAL L + + G CV G +GV T A+ S+ PKRG+HR HVAA A GTT Y+L LAKG RDR GE+ V SRLV+RA+ E P A LL+ E V T AL +LL+ + VLVLP G+ +PA +++ PGSFNP+H GHV + + AQ T A + G A P++ E+S NADK + + RV G AVA+T APLF KA++FP +FVVG DT RRI+D KYY G A + AL I++ GC IV GR + F TL +L+ S LP +L+ +F LE DFR+D+SST++R Sbjct: 45 VPADVTQTIRNLYAMPKPARIYIVATGAGSTAGSWLLGVPGASASVLEMCVPYAKASLAKFLGGE---PKHFCCEETAVAMAEKAYERALHLWMMDND--------------------------------GNPHCVGGENF------------------------MGVSITGAIVSSTPKRGEHRVHVAAKTALGTTTYTLCLAKGERDRVGEEHVASRLVIRAIAEAAQTPVSDEFSACSLLEG-------------EVVQGPIFTPTSSALQKLLSSKLSNVLVLPLGSMPSTPQGPGAATTATALEIADF------------------------------------------------------------IPARKSILVPGSFNPIHQGHVEMAKKAQQQVILTAAAA-------------GEAEDGDAGITPPIILEISAFNADKPTIGYDAVADRVRLIQKAG-------LAVAVTNAPLFSDKAKMFPNSLFVVGADTARRIIDKKYYG-GTEAGVVLALGYIRHQGCGFIVAGRKET--------------------------------------------DDEFLTLPMILQGSTLPPALQSLFTELE--DFRLDISSTDIR 475
BLAST of jgi.p|Trimin1|348454 vs. uniprot
Match: A0A6N8YWS7_9CHLR (CTP_transf_like domain-containing protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A6N8YWS7_9CHLR) HSP 1 Score: 149 bits (376), Expect = 1.040e-35 Identity = 173/622 (27.81%), Postives = 235/622 (37.78%), Query Frame = 1 Query: 55 DVHALLSELYSMPNPPQLCLSTTGAGGQAVAWLLGVPGASATLLEATVPYSPLSGRQWMGGAAAAPTSLCSEEAAIAMAREAYKRALQLTVAERGLARAAAACALGVGATAAVASTRPKRGDHRWDGGGARCVRGAGVPVHACLVAVGVVVIDQAYVGAACALGVGATAALASTQPKRGDHRCHVAACGAAGTTLYSLTLAKGRRDRAGEDAVVSRLVLRAVLEPPEAFLRAALLLDXXXXXXXXSAPQPPEAVPAARHTAPPDALDRLLAGHIGQVLVLPGGANGEVDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQMMFPELPVPAPALVFPGSFNPLHNGHVALVQAAQACYARTQADSSAGSXXXXXXXXXGSDAAAAAHHPLPVLFELSVANADKGALPRAELLRRVAQFAGGGGATLGAQYAVALTAAPLFLQKARLFPGCVFVVGVDTVRRILDPKYYADGDAAEMAAALAEIKYLGCRIIVGGRVQQAASPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRFETLSDVLRDSPLPQSLRGMFIGLEEDDFRVDLSSTELR 1920 ++ ++++++ P+ + L GAG A++WLLGV GAS T+LE VPY LS +G P+ SE+ A AMA AY R + L R D D VG AC TA +A+ +PKRGDHR +A T +L + KG+RDR GE+ +VSRL+++A+ A +A + PE V +A H +P + RLL G +V ++ G G++ A PA V PGSFNPLH GH+ L A+A G D +++EL+V N DK L E+LRR+A GGGA VALT P F KAR+FPG VFV+G DT+ R++DPKYY G A+M ALAEI GCR +V GR Q + F TL +V +PQ + +F + ED FR D+SSTELR Sbjct: 4 NIERVITQMHDTPH--KSVLVVAGAGSSAMSWLLGVSGASRTILETLVPYGRLSMIDLVGEE---PSQYVSEQNARAMAYAAYCRGMDL----------------------------------RED--------------------------DSPVVGVAC------TATIATDRPKRGDHRACIATWDERRTFGCNLVIDKGKRDRTGEEELVSRLLIQAM---------ARSFGVESEFEIGFTAAESPE-VTSANHDSP---VQRLLRG---EVDLVKAGLEGKLSAVESGKHE------------------------------------------------------------------------PAAVLPGSFNPLHEGHMRLAAVARAM--------------------TGMD----------LVYELAVLNVDKPPLEEEEVLRRIAGI--GGGAP------VALTRTPTFRLKARIFPGSVFVIGWDTMVRLIDPKYYG-GSEADMLTALAEIWAQGCRFLVAGRENQGS---------------------------------------------FRTLDEVA----VPQGFQPLFQAIPEDKFRADISSTELR 378
BLAST of jgi.p|Trimin1|348454 vs. uniprot
Match: A0A7S3XRD4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XRD4_HETAK) HSP 1 Score: 146 bits (368), Expect = 1.490e-34 Identity = 97/261 (37.16%), Postives = 129/261 (49.43%), Query Frame = 1 Query: 1150 PVPAPALVFPGSFNPLHNGHVALVQAAQACYARTQADSSAGSXXXXXXXXXGSDAAAAAHHPLPVLFELSVANADKGALPRAELLRRVAQFAGGGGATLGAQYAVALTAAPLFLQKARLFPGCVFVVGVDTVRRILDPKYYADGDAAEMAAALAEIKYLGCRIIVGGRVQQAASPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRFETLSDVLRDSPLPQSLRGMFIGLEEDDFRVDLSSTELRAKAA 1932 P P +V+PGS+NPLH GH++L++ A+A A + A A P +FE++ NADK L R L R+ QF +T +AV +T PLF++KARLFP C FVVG DT R++DPKYY +GD EM AL+EI LGCR +VGGR + F T+ VLR+ LPQ ++ MF G+ E+ FR+D+SSTELR KAA Sbjct: 156 PFPPGTIVYPGSYNPLHEGHLSLMRTARALAA--------------------AGARAEGRPPPAAVFEIAAFNADKPPLARPALEARLQQFTN---STPETSWAVVVTKVPLFIEKARLFPNCTFVVGADTATRLIDPKYY-NGDPLEMINALSEIAVLGCRFVVGGRRVEGRG--------------------------------------------FLTVDHVLREQRLPQKIKNMFYGIVEEAFRMDISSTELRQKAA 348
BLAST of jgi.p|Trimin1|348454 vs. uniprot
Match: A0A7R9YBG6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBG6_9STRA) HSP 1 Score: 146 bits (369), Expect = 2.370e-34 Identity = 104/271 (38.38%), Postives = 130/271 (47.97%), Query Frame = 1 Query: 1147 LPVPAPALVFPGSFNPLHNGHVALVQAAQACYARTQADSSAGSXXXXXXXXXGSDAAAAAHHPLPVLFELSVANADKGALPRAELLRRVAQFAGGGGATLGA-------------QYAVALTAAPLFLQKARLFPGCVFVVGVDTVRRILDPKYYADGDAAEMAAALAEIKYLGCRIIVGGRVQQAASPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRFETLSDVLRDSPLPQSLRGMFIGLEEDDFRVDLSSTELR 1920 +P+P LVFPGSFNPLH GHV + A+A +R A+ LP+L+E++ NADKGA+P + RRV QF+ A + + AVA+T+ PLF QKA LFPG VF+VG DT +RI+DPKYY D D M AA+AE+ GC IVGGR S FE DVL D+ LP+ LR MF L ED+FRVD+SSTELR Sbjct: 227 MPLPCKCLVFPGSFNPLHGGHVRM---AEAAVSRWMAEKK---------------------QVLPILYEITAFNADKGAIPLETVQRRVEQFSAAVAAEEDSDAAESIRVGPEKVRAAVAVTSVPLFSQKAELFPGSVFLVGADTAKRIVDPKYYGD-DHENMVAAIAELYAKGCSFIVGGRTTGNGS--------------------------------------------FELAEDVLDDAALPRHLREMFWTLSEDEFRVDVSSTELR 428
BLAST of jgi.p|Trimin1|348454 vs. uniprot
Match: A0A6L7PZ14_9CHLR (CTP_transf_like domain-containing protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A6L7PZ14_9CHLR) HSP 1 Score: 144 bits (364), Expect = 4.120e-34 Identity = 155/532 (29.14%), Postives = 205/532 (38.53%), Query Frame = 1 Query: 58 VHALLSELYSMPNPPQLCLSTTGAGGQAVAWLLGVPGASATLLEATVPYSPLSGRQWMGGAAAAPTSLCSEEAAIAMAREAYKRALQLTVAERGLARAAAACALGVGATAAVASTRPKRGDHRWDGGGARCVRGAGVPVHACLVAVGVVVIDQAYVGAACALGVGATAALASTQPKRGDHRCHVAACGAAGTTLYSLTLAKGRRDRAGEDAVVSRLVLRAVLEPPEAFLRAALLLDXXXXXXXXSAPQPPEAVPAARHTAPPDALDRLLAGHIGQVLVLPGGANGEVDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQMMFPELPVPAPALVFPGSFNPLHNGHVALVQAAQACYARTQADSSAGSXXXXXXXXXGSDAAAAAHHPLPVLFELSVANADKGALPRAELLRRVAQFAGGGGATLGAQYAVALTAAPLFLQKARLFPGCVFVVGVDTVRRILDPKYYADGDAAEMAAALAEIKYLGCRIIVGGR 1653 + A+++ +++ P+ Q ++ GAG A+AWLLGV GAS T+LE +PY L+ ++ G A P S + A MAR A++R L L + GD P+ +G+G TA +A+ + KRGDHR ++A AG T +LTL KG R+RAGE+ VVSRLV+ A L A +D S+ Q ARH P + RLL G V + P G+ VDA P + PGSFNPLH GHV L AA A A PV +ELSV N DK L E+ RR+ QF G G V LT A F +KA+LFPGC FV+G DT R++ P+YY D ++A M ALAE+ G R V GR Sbjct: 5 IAAVVASIHNTPH--QAVVAVAGAGNYALAWLLGVGGASRTVLETRIPYGYLAMTDFLAGYA--PEQTVSADTARRMARSAWQRGLAL-----------------------------REGD---------------API----------------------VGLGCTATIATDRTKRGDHRAYIATWDDAGVTTDALTLEKGLRERAGEEDVVSRLVIAA--------LARACTVDAEIDLRLASSEQ--LTTETARHADP---VQRLLDGDARWVTIHPDGSMA-VDADP-----------------------------------------------------------------------------PQALLPGSFNPLHPGHVELAAAASAALAA------------------------------PVAYELSVVNVDKPPLAVDEVQRRIQQFQGVG--------TVVLTGAETFYKKAQLFPGCGFVIGWDTATRLIQPRYYNDSESA-MLTALAEMWASGSRFAVAGR 336
BLAST of jgi.p|Trimin1|348454 vs. uniprot
Match: A0A7S0IFP8_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0IFP8_MICPS) HSP 1 Score: 140 bits (354), Expect = 2.840e-32 Identity = 133/385 (34.55%), Postives = 171/385 (44.42%), Query Frame = 1 Query: 541 LGVGATAALASTQPKRGDHRCHVAACGAAGTTLYSLTLAKGRRDRAGEDAVVSRLVLRAVLEPPEAFLRAALLLDXXXXXXXXSAPQPPEAVPAARHTAPPDALDRLLA--GHIGQVLVLPGGANGEVDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQMMFPELPVPAPALVFPGSFNPLHNGHVALVQAAQACYARTQADSSAGSXXXXXXXXXGSDAAAAAHHPLPVLFELSVANADKGALPRAELLRRVAQFAGGG---GATLGAQYA----VALTAAPLFLQKARLFPGCVFVVGVDTVRRILDPKYYADGDAAEMAAALAEIKYLGCRIIVGGRVQQAA 1668 +G+G T ALAS PKRG+HRCHVA GA G Y LT+ KGRRDR ED + S LV++A+ + XXXXX + +P + V R P D +R G + L+ G E DA+ P+P A+V PGSFNPLH+GH ++++AA A GS PV +EL+V NADKG LP AE+ RRVAQFAG G GA+ A+ + + LT APL+ QKA L PG FV+G DT R+L+PKYY G EM AAL ++ GC +V GRV+Q A Sbjct: 102 VGLGCTCALASQPPKRGEHRCHVATFGARGFAEYHLTMEKGRRDRWEEDGLASALVVQALADAXXXXXXXXXXXXXXXXXHRQPSVKPDDVV-TGRVVPPGDVFERTRTPLGDPLEYLISGDGDVVEFDASSGVCTAVGVA----------------------------------------------------------------PLPNRAVVLPGSFNPLHDGHRSMLRAALAT------------------RPPGST---------PV-YELAVTNADKGTLPTAEVRRRVAQFAGVGDDSGASDEAESSSHPRLWLTRAPLYSQKAALMPGATFVLGYDTAVRLLNPKYY--GGEGEMRAALRTMRASGCTFVVAGRVEQGA 391
BLAST of jgi.p|Trimin1|348454 vs. uniprot
Match: A0A6T6T7R1_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A6T6T7R1_9EUKA) HSP 1 Score: 141 bits (355), Expect = 3.910e-32 Identity = 156/613 (25.45%), Postives = 232/613 (37.85%), Query Frame = 1 Query: 103 QLCLSTTGAGGQAVAWLLGVPGASATLLEATVPYSPLSGRQWMGGAAAAPTSLCSEEAAIAMAREAYKRALQLTVAERGLARAAAACALGVGATAAVASTRPKRGDHRWDGGGARCVRGAGVPVHACLVAVGVVVIDQAYVGAACALGVGATAALASTQPKRGDHRCHVAACGAAGTTLYSLTLAKGRRDRAGEDAVVSRLVLRAVLEPPEAFLRAALLLDXXXXXXXXSAPQPPEAVPAARHTAPPDALDRLLAGHIGQVLVLPGGANGEVDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQMMFPELPVPAPALVFPGSFNPLHNGHVALVQAAQACYARTQADSSAGSXXXXXXXXXGSDAAAAAHHPLPVLFELSVANADKGALPRAELLRRVAQF---AGGGGATLGAQYAVALTAAPLFLQKARLFPGCVFVVGVDTVRRILDPKYYADGDAAEMAAALAEIKYLGCRIIVGGRVQQAASPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRFETLSDVLR--DSPLPQSLRGMFIGLEEDDFRVDLSSTELRAK 1926 ++ ++TTG+GG+A+A L VPG S+ + E VPY+ S Q++G A S+E AI +AR A++R+++++ RP+ ++G+G TAA+ ST+PK+GDH+ +VA C + L +AK R+R ED V+ L++R E + LL S P+ + + + R+L+G L LP D + P A L++PGSFNPLH GH+ L +AA S AA + ++FE+SV+NADK + + E+L RV+QF A G T + + VA+T A F+ KA+LFPGC FVVG DT RI+DPKYY D + M L + G R VG RV + +T+ D L+ D + L+ MF+ + E DFR+DLSSTE+R+K Sbjct: 70 KMVIATTGSGGEAIAQLCQVPGMSSLIQEMIVPYAEESSEQFVGSAV---KKWVSKEMAIELARAAHRRSVEISAKSPDF----------------FTKPRPR------------------------------------------SIGLGCTAAVVSTRPKKGDHQAYVATCDDLKIRVCRLVMAKNMRNRQEEDRCVAALIIRMASEAITGDTESYLLRQLKQNT---SVPKITDVIEGPNEAPRQTPVQRVLSGECSFALFLPNEKVAYCDTR---------------------------------------------------------------------LSPSSSNDALTLLYPGSFNPLHEGHLVLAKAAI------------------------SRAAKETDRKINLIFEISVSNADKATIDQKEILSRVSQFSSQASEDGKTFES-FPVAITTAKYFVDKAKLFPGCWFVVGADTAIRIIDPKYY-DSNKWNMFRVLCGLYESGVRFTVGVRVDKHGKLLTT-----------------------------------------QTILDELKALDEVIYDGLKHMFVDIPEKDFRLDLSSTEIRSK 482
BLAST of jgi.p|Trimin1|348454 vs. uniprot
Match: A5UTC4_ROSS1 (Uncharacterized protein n=1 Tax=Roseiflexus sp. (strain RS-1) TaxID=357808 RepID=A5UTC4_ROSS1) HSP 1 Score: 137 bits (346), Expect = 1.220e-31 Identity = 149/475 (31.37%), Postives = 180/475 (37.89%), Query Frame = 1 Query: 526 GAACALGVGATAALASTQPKRGDHRCHVAACGAAGTTLYSLTLAKGRRDRAGEDAVVSRLVLRAVLE-----PPEAFLRAALLLDXXXXXXXXSAPQPPEAVPAARHTAPPDALDRLLAGHIGQVLVLPGGANGEVDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQMMFPELPVPAPALVFPGSFNPLHNGHVALVQAAQACYARTQADSSAGSXXXXXXXXXGSDAAAAAHHPLPVLFELSVANADKGALPRAELLRRVAQFAGGGGATLGAQYAVALTAAPLFLQKARLFPGCVFVVGVDTVRRILDPKYYADGDAAEMAAALAEIKYLGCRIIVGGRVQQAASPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRFETLSDVLRDSPLPQSLRGMFIGLEEDDFRVDLSSTELRAKAAA 1935 GAA LGV TAA+A+ + KRGDH C VA A + LTLAKG RDRAGE+A++S L++RA+ E PP AL L+ P E V A PD L LL G I V V G +G + PA + GSFNPLH GH L QAA PV FEL V NADK L EL RR+ QF G +Y V LT APLF+QKA LFPGC FV+G DT RI+DP+YY DG+A AA A I C +V GRV+ F TL+D+ +P +LR +F L E FR+DLSST +R +AA Sbjct: 90 GAAPCLGVACTAAIATDRVKRGDHGCSVAVYDGATLRVSRLTLAKGARDRAGEEALISLLIIRAIAEACGVAPP------ALALE------------PSETV-EVEEEASPDPLMLLLNGDIAAVFV---GKDGRICREGAP---------------------------------------------------------------------------PAALLSGSFNPLHAGHEYLAQAAAVVLDT------------------------------PVTFELPVLNADKPPLRYIELERRLDQFRG--------RYPVVLTRAPLFVQKADLFPGCTFVIGYDTALRIIDPRYY-DGEAGR-DAAFARIAAQRCTFLVAGRVRDGI---------------------------------------------FRTLADI----DMPPALRPLFRELPERLFRIDLSSTAIRNASAA 378
BLAST of jgi.p|Trimin1|348454 vs. uniprot
Match: A0A836CI39_9STRA (GRIP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI39_9STRA) HSP 1 Score: 1294 bits (3349), Expect = 0.000e+0 Identity = 1240/1240 (100.00%), Postives = 1240/1240 (100.00%), Query Frame = 1 Query: 1 MFKNFGDVFSVLDLDQLADEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFASPASATQPQSLLGDTLTGFWSTPTRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAATEDGWEEWDDGATVPDSKPVDITAAAAAHAPPPAPETPKATPAMPLPSPRPPAXXXXXXXXXXXXXXXXXXXXXXAEMKAKLDTALGTLRRLKGVVLQREGELAEAARAAERSAQGRAELQAECAQLQRALSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDKPAGADRDEPTCADAEQQPQGTECEAQSLAARLAAAEAXXXXXXXXXXXXXXXXXXXXXRAAVMGAALEEAAESAQLAXXXXXXXXXXXXXXXXXXXXESAEQMHEYALAAAAEAAAADALAHAAAMEAVEGRLAAADEEARQXXXXXAGAAECMRRLEGQSTDGMKLLDVVDCCSACSAAGKAELDESQELSAQLLRELGSERTAAEEAQRTLEQQVAAALRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASLAQRAADAQARVAALEQELXXXXXXXXXXXXXRSWSVARVHYGSECVCGGTAIVLGANAPCWRKARARVAALGRELQGATDRKQQLEAQLSQYKLRSVEALRKFTAQAAELSAARNALEDEADALRAAAAEAQRAAQFGHRAEAAAATSNFHSVFAMILPDALTQAAAXXXXXXXAQEDLGRAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQCAQLQARVLELEXXXXXXXXXXXXXXXXXXXXXXXEAAALAQRLGSPAPASPSAANGYFSSXXXXXXXXXXXXXXXXXXXXXASGSVTPSADGGAXXXXXXXXXXXXXXXXXXXXDAFGAGNGVRADGDVVSSGYGAAXXXXXXXXXXXXXXXXXXDPSMTKLRASSSFAGSVDGXXXSSIDGSEHGRRAXXXXXXXXQQLWNVHTPRRSLPGSFSIGGGGGATLAAAAGAASIGEDGGDXXXXXXXXXXXXRALAREXXXXDAEAAHAQEGDDAARRAQLFLVDQLQEARRRDQARAQALTRELEGALRALEAAQATESTLKNKLEKFENGVRREEVLHKSPSAHVNLEYLKAAVVRYMQSDEPSEHSRLLPVIATILQLSTSEQQAVATSIKRRSSASAVLPFSWFPAGGPGKT 3720 MFKNFGDVFSVLDLDQLADEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFASPASATQPQSLLGDTLTGFWSTPTRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAATEDGWEEWDDGATVPDSKPVDITAAAAAHAPPPAPETPKATPAMPLPSPRPPAXXXXXXXXXXXXXXXXXXXXXXAEMKAKLDTALGTLRRLKGVVLQREGELAEAARAAERSAQGRAELQAECAQLQRALSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDKPAGADRDEPTCADAEQQPQGTECEAQSLAARLAAAEAXXXXXXXXXXXXXXXXXXXXXRAAVMGAALEEAAESAQLAXXXXXXXXXXXXXXXXXXXXESAEQMHEYALAAAAEAAAADALAHAAAMEAVEGRLAAADEEARQXXXXXAGAAECMRRLEGQSTDGMKLLDVVDCCSACSAAGKAELDESQELSAQLLRELGSERTAAEEAQRTLEQQVAAALRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASLAQRAADAQARVAALEQELXXXXXXXXXXXXXRSWSVARVHYGSECVCGGTAIVLGANAPCWRKARARVAALGRELQGATDRKQQLEAQLSQYKLRSVEALRKFTAQAAELSAARNALEDEADALRAAAAEAQRAAQFGHRAEAAAATSNFHSVFAMILPDALTQAAAXXXXXXXAQEDLGRAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQCAQLQARVLELEXXXXXXXXXXXXXXXXXXXXXXXEAAALAQRLGSPAPASPSAANGYFSSXXXXXXXXXXXXXXXXXXXXXASGSVTPSADGGAXXXXXXXXXXXXXXXXXXXXDAFGAGNGVRADGDVVSSGYGAAXXXXXXXXXXXXXXXXXXDPSMTKLRASSSFAGSVDGXXXSSIDGSEHGRRAXXXXXXXXQQLWNVHTPRRSLPGSFSIGGGGGATLAAAAGAASIGEDGGDXXXXXXXXXXXXRALAREXXXXDAEAAHAQEGDDAARRAQLFLVDQLQEARRRDQARAQALTRELEGALRALEAAQATESTLKNKLEKFENGVRREEVLHKSPSAHVNLEYLKAAVVRYMQSDEPSEHSRLLPVIATILQLSTSEQQAVATSIKRRSSASAVLPFSWFPAGGPGKT Sbjct: 1 MFKNFGDVFSVLDLDQLADEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFASPASATQPQSLLGDTLTGFWSTPTRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAATEDGWEEWDDGATVPDSKPVDITAAAAAHAPPPAPETPKATPAMPLPSPRPPAXXXXXXXXXXXXXXXXXXXXXXAEMKAKLDTALGTLRRLKGVVLQREGELAEAARAAERSAQGRAELQAECAQLQRALSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDKPAGADRDEPTCADAEQQPQGTECEAQSLAARLAAAEAXXXXXXXXXXXXXXXXXXXXXRAAVMGAALEEAAESAQLAXXXXXXXXXXXXXXXXXXXXESAEQMHEYALAAAAEAAAADALAHAAAMEAVEGRLAAADEEARQXXXXXAGAAECMRRLEGQSTDGMKLLDVVDCCSACSAAGKAELDESQELSAQLLRELGSERTAAEEAQRTLEQQVAAALRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASLAQRAADAQARVAALEQELXXXXXXXXXXXXXRSWSVARVHYGSECVCGGTAIVLGANAPCWRKARARVAALGRELQGATDRKQQLEAQLSQYKLRSVEALRKFTAQAAELSAARNALEDEADALRAAAAEAQRAAQFGHRAEAAAATSNFHSVFAMILPDALTQAAAXXXXXXXAQEDLGRAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQCAQLQARVLELEXXXXXXXXXXXXXXXXXXXXXXXEAAALAQRLGSPAPASPSAANGYFSSXXXXXXXXXXXXXXXXXXXXXASGSVTPSADGGAXXXXXXXXXXXXXXXXXXXXDAFGAGNGVRADGDVVSSGYGAAXXXXXXXXXXXXXXXXXXDPSMTKLRASSSFAGSVDGXXXSSIDGSEHGRRAXXXXXXXXQQLWNVHTPRRSLPGSFSIGGGGGATLAAAAGAASIGEDGGDXXXXXXXXXXXXRALAREXXXXDAEAAHAQEGDDAARRAQLFLVDQLQEARRRDQARAQALTRELEGALRALEAAQATESTLKNKLEKFENGVRREEVLHKSPSAHVNLEYLKAAVVRYMQSDEPSEHSRLLPVIATILQLSTSEQQAVATSIKRRSSASAVLPFSWFPAGGPGKT 1240 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348454 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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BLAST of jgi.p|Trimin1|348454 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_6601 ID=mRNA_6601|Name=jgi.p|Trimin1|348454|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2149bp|location=Sequence derived from alignment at Contig_25:104899..111511- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. CGATCATCGACATCACAGGAACATAGCAGCGGCGGCGGCTCGGCGGTGCCback to top protein sequence of jgi.p|Trimin1|348454 >Trimin1|348454|estExt_Genemark1.C_Ctg_250006 ID=Trimin1|348454|estExt_Genemark1.C_Ctg_250006|Name=jgi.p|Trimin1|348454|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=641bp MPNPPQLCLSTTGAGGQAVAWLLGVPGASATLLEATVPYSPLSGRQWMGGback to top mRNA from alignment at Contig_25:104899..111511- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_6601 ID=mRNA_6601|Name=jgi.p|Trimin1|348454|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=6613bp|location=Sequence derived from alignment at Contig_25:104899..111511- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_25:104899..111511- >mRNA_6601 ID=mRNA_6601|Name=jgi.p|Trimin1|348454|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1923bp|location=Sequence derived from alignment at Contig_25:104899..111511- (Tribonema minus UTEX_B_3156 )back to top |