Trimin1|348444|estExt_Genemark1.C_Ctg_240078 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|348444
Unique Name	Trimin1\|348444\|estExt_Genemark1.C_Ctg_240078
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	984

Homology

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BLAST of jgi.p|Trimin1|348444 vs. uniprot
Match: A0A835Z1R5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1R5_9STRA)

HSP 1 Score: 1068 bits (2763), Expect = 0.000e+0
Identity = 983/983 (100.00%), Postives = 983/983 (100.00%), Query Frame = 0

Query:    1 MEVAAQVSSPMQGEGGLAGGASAAEVASTAPAAAXAVNKTTPKAIASGRPSSASKATVKTTPGSTPVKKXXXXXXXXXXXXXXXXXXXXXXAVRTVSATRTRAAXXXXXXXXXXXXXXXXXXXXXXXXPRTPAARAAVTPKSTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEXXXAKRLTLAERQAKXXXXXXXXXXXXXXXXXXXXXXXXXPDTPSAGRLSVGSTVSTKTXXXXXXXXXXXXXXXXXXXSAQPGATAPAGPKMVRTNSFNRLHEEAQLRAERQRQRREAAEAQDTPTFTPEISSHAKRSRSLSVSSTCSAFERLHGERTELEARRQAAAAQRNQEVMQQCTFAPTIGPNFVAGVGMPAQPRGRSSNRASLGGESADGTGDAAAAAAAAGPMHTRMAVFLQQRQARLDKLRADVAAQQGKDLTFSPKLNRPKTAKTSPPKDASAPTEGGQEDRGVDSSVPGPAKEAESGKQNAAAAPVAKLKAAAGGKQSPRGDGAAAKISAGSHAKSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPVFERLLADASEHAARLRREQEAGEARALAECTFAPAIPSSRKSSVSARRSSGASAGSTGGAGVFDRLAAAAGPSHREPAAAPVSAAEVLARHVKVGGGKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSAADAAAAVAAFEXXXXXXXXXXXXXXXXXXXXXHGKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAQQHGAADADEPAAAAAPGLEALLDLDGNDDADAADAGPVFDVAEMLTKDSAATVSEVTTDAAAAVANGGAAVAWDLDAAGAREGASAAAVSESVESLLHADGGSDAHGRSSAQKDKKYDGGGNAAACGTILDTHIAWEEEMRDQIHQAGVL 983
            MEVAAQVSSPMQGEGGLAGGASAAEVASTAPAAAXAVNKTTPKAIASGRPSSASKATVKTTPGSTPVKKXXXXXXXXXXXXXXXXXXXXXXAVRTVSATRTRAAXXXXXXXXXXXXXXXXXXXXXXXXPRTPAARAAVTPKSTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEXXXAKRLTLAERQAKXXXXXXXXXXXXXXXXXXXXXXXXXPDTPSAGRLSVGSTVSTKTXXXXXXXXXXXXXXXXXXXSAQPGATAPAGPKMVRTNSFNRLHEEAQLRAERQRQRREAAEAQDTPTFTPEISSHAKRSRSLSVSSTCSAFERLHGERTELEARRQAAAAQRNQEVMQQCTFAPTIGPNFVAGVGMPAQPRGRSSNRASLGGESADGTGDAAAAAAAAGPMHTRMAVFLQQRQARLDKLRADVAAQQGKDLTFSPKLNRPKTAKTSPPKDASAPTEGGQEDRGVDSSVPGPAKEAESGKQNAAAAPVAKLKAAAGGKQSPRGDGAAAKISAGSHAKSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPVFERLLADASEHAARLRREQEAGEARALAECTFAPAIPSSRKSSVSARRSSGASAGSTGGAGVFDRLAAAAGPSHREPAAAPVSAAEVLARHVKVGGGKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSAADAAAAVAAFEXXXXXXXXXXXXXXXXXXXXXHGKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAQQHGAADADEPAAAAAPGLEALLDLDGNDDADAADAGPVFDVAEMLTKDSAATVSEVTTDAAAAVANGGAAVAWDLDAAGAREGASAAAVSESVESLLHADGGSDAHGRSSAQKDKKYDGGGNAAACGTILDTHIAWEEEMRDQIHQAGVL
Sbjct:    1 MEVAAQVSSPMQGEGGLAGGASAAEVASTAPAAAXAVNKTTPKAIASGRPSSASKATVKTTPGSTPVKKXXXXXXXXXXXXXXXXXXXXXXAVRTVSATRTRAAXXXXXXXXXXXXXXXXXXXXXXXXPRTPAARAAVTPKSTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEXXXAKRLTLAERQAKXXXXXXXXXXXXXXXXXXXXXXXXXPDTPSAGRLSVGSTVSTKTXXXXXXXXXXXXXXXXXXXSAQPGATAPAGPKMVRTNSFNRLHEEAQLRAERQRQRREAAEAQDTPTFTPEISSHAKRSRSLSVSSTCSAFERLHGERTELEARRQAAAAQRNQEVMQQCTFAPTIGPNFVAGVGMPAQPRGRSSNRASLGGESADGTGDAAAAAAAAGPMHTRMAVFLQQRQARLDKLRADVAAQQGKDLTFSPKLNRPKTAKTSPPKDASAPTEGGQEDRGVDSSVPGPAKEAESGKQNAAAAPVAKLKAAAGGKQSPRGDGAAAKISAGSHAKSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPVFERLLADASEHAARLRREQEAGEARALAECTFAPAIPSSRKSSVSARRSSGASAGSTGGAGVFDRLAAAAGPSHREPAAAPVSAAEVLARHVKVGGGKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSAADAAAAVAAFEXXXXXXXXXXXXXXXXXXXXXHGKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAQQHGAADADEPAAAAAPGLEALLDLDGNDDADAADAGPVFDVAEMLTKDSAATVSEVTTDAAAAVANGGAAVAWDLDAAGAREGASAAAVSESVESLLHADGGSDAHGRSSAQKDKKYDGGGNAAACGTILDTHIAWEEEMRDQIHQAGVL 983

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|348444 vs. uniprot

BLAST of jgi.p|Trimin1|348444 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A835Z1R5_9STRA	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 327..347
None	No IPR available	COILS	Coil	Coil	coord: 758..778
None	No IPR available	COILS	Coil	Coil	coord: 279..301
None	No IPR available	COILS	Coil	Coil	coord: 415..435
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 614..657
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..309
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 44..78
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 636..656
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 224..238
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 370..403
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 798..835
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 274..297
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 786..862
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 710..751
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 92..115
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 436..602

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_24	contig	Contig_24:804607..813975 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|348444	mRNA_7540	Tribonema minus UTEX_B_3156	mRNA	Contig_24 804607..813975 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|348444|estExt_Genemark1.C_Ctg_240078 ID=Trimin1|348444|estExt_Genemark1.C_Ctg_240078|Name=jgi.p|Trimin1|348444|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=984bp
MEVAAQVSSPMQGEGGLAGGASAAEVASTAPAAAAAVNKTTPKAIASGRP
SSASKATVKTTPGSTPVKKPSTPGGSATPAASGAGGVSRPSAVRTVSATR
TRAAAASSPASATASPAQHAAAAATAGSPRTPAARAAVTPKSTAAAAAAA
AAAAAAPAAAEDGSPSSAADGGSGGKEAAAAKRLTLAERQAKATAAAVAR
ASARTSRSPGGSAKAAAPDTPSAGRLSVGSTVSTKTPAKKAPSPKARPLS
AGGSGSAQPGATAPAGPKMVRTNSFNRLHEEAQLRAERQRQRREAAEAQD
TPTFTPEISSHAKRSRSLSVSSTCSAFERLHGERTELEARRQAAAAQRNQ
EVMQQCTFAPTIGPNFVAGVGMPAQPRGRSSNRASLGGESADGTGDAAAA
AAAAGPMHTRMAVFLQQRQARLDKLRADVAAQQGKDLTFSPKLNRPKTAK
TSPPKDASAPTEGGQEDRGVDSSVPGPAKEAESGKQNAAAAPVAKLKAAA
GGKQSPRGDGAAAKISAGSHAKSPPAAAATTAVAPSNGHHTPAAKPARKP
AASHGAAATKADKPASAAAVAAATAAAVKGEHAARRGSGGSSGGGGGAPV
FERLLADASEHAARLRREQEAGEARALAECTFAPAIPSSRKSSVSARRSS
GASAGSTGGAGVFDRLAAAAGPSHREPAAAPVSAAEVLARHVKVGGGKAK
ADAAAAAAGKSTGGAGAQGAGKQDAAAETLGEEGAAAAPKGAEGGTSAAD
AAAAVAAFEAAEAQAAAAAQAAAALEAAAAHGKTSAAAAHSAEAEDAAGD
EAAEYAGDGDDEQHSADGDDDQPDADDDDDDAQQHGAADADEPAAAAAPG
LEALLDLDGNDDADAADAGPVFDVAEMLTKDSAATVSEVTTDAAAAVANG
GAAVAWDLDAAGAREGASAAAVSESVESLLHADGGSDAHGRSSAQKDKKY
DGGGNAAACGTILDTHIAWEEEMRDQIHQAGVL*