Trimin1|47509|CE47508_322 (polypeptide) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|47509 vs. uniprot
Match: A0A835YZR7_9STRA (Fucoxanthin chl a/c light-harvesting protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZR7_9STRA) HSP 1 Score: 508 bits (1308), Expect = 1.830e-181 Identity = 269/269 (100.00%), Postives = 269/269 (100.00%), Query Frame = 0 Query: 1 MVARTLAVAAAVAAPALAFVAPSSSSLGVAPRASSSLRMMSDEVMSQSVPFLPRNPVLDSVDLAGDVGFDPLNLAKDEDTLLFYRDAEVKHARLAMLAALGWVVEELFDGRLAQAAGAPDLLVRPDAEGIGLAPSLLNGGLSNIPLAYWLIVVGLTGALEVQFAAITKDIVKQGREPGDYGFDPFGLWPEDPEEQKLARLRELKNGRLGMIAIVAFAFQEAVSRVPVVEETPALFGLTPGEEKIEAEIATDAIQAFDYLEYFLHRLHLI 269 MVARTLAVAAAVAAPALAFVAPSSSSLGVAPRASSSLRMMSDEVMSQSVPFLPRNPVLDSVDLAGDVGFDPLNLAKDEDTLLFYRDAEVKHARLAMLAALGWVVEELFDGRLAQAAGAPDLLVRPDAEGIGLAPSLLNGGLSNIPLAYWLIVVGLTGALEVQFAAITKDIVKQGREPGDYGFDPFGLWPEDPEEQKLARLRELKNGRLGMIAIVAFAFQEAVSRVPVVEETPALFGLTPGEEKIEAEIATDAIQAFDYLEYFLHRLHLI Sbjct: 1 MVARTLAVAAAVAAPALAFVAPSSSSLGVAPRASSSLRMMSDEVMSQSVPFLPRNPVLDSVDLAGDVGFDPLNLAKDEDTLLFYRDAEVKHARLAMLAALGWVVEELFDGRLAQAAGAPDLLVRPDAEGIGLAPSLLNGGLSNIPLAYWLIVVGLTGALEVQFAAITKDIVKQGREPGDYGFDPFGLWPEDPEEQKLARLRELKNGRLGMIAIVAFAFQEAVSRVPVVEETPALFGLTPGEEKIEAEIATDAIQAFDYLEYFLHRLHLI 269
BLAST of jgi.p|Trimin1|47509 vs. uniprot
Match: A0A835YPP6_9STRA (Fucoxanthin chl a/c light-harvesting protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPP6_9STRA) HSP 1 Score: 372 bits (956), Expect = 8.630e-128 Identity = 201/262 (76.72%), Postives = 218/262 (83.21%), Query Frame = 0 Query: 9 AAAVAAPALAFVAPSSSSLGVAPRASSSLRMMS--DEVMSQSVPFLPRNPVLDSVDLAGDVGFDPLNLAKDEDTLLFYRDAEVKHARLAMLAALGWVVEELFDGRLAQAAGAPDLLVRPDAEGIGLAPSLLNGGLSNIPLAYWLIVVGLTGALEVQFAAITKDIVKQGREPGDYGFDPFGLWPEDPEEQKLARLRELKNGRLGMIAIVAFAFQEAVSRVPVVEETPALFGLTPGEEKIEAEIATDAIQAFDYLEYFLHRLHL 268 AAA A A AFVAP ++ +SS+LRM S +EVMS+SVPFLPRNPVLD +LAGDVGFDPLNLAKDE TLLFYRDAEVKHARLAMLAALGWVV ELFDGRLA AA APDLLVRPD EGIGLAPSLLNGGL+ IP AYWL+VVGLTGALE QFAAIT +V QGREPGDYGFDPF LWP++ E QK R +ELKNGRL MIAIVAFAFQEAVSRVPVVEETPALFGLTP E+ EAEI A +F+ +EYFLHRLHL Sbjct: 11 AAATIATASAFVAPHTALPVAKATSSSALRMSSIGNEVMSESVPFLPRNPVLDEFELAGDVGFDPLNLAKDEKTLLFYRDAEVKHARLAMLAALGWVVSELFDGRLAAAANAPDLLVRPDGEGIGLAPSLLNGGLATIPAAYWLLVVGLTGALETQFAAITPGVVAQGREPGDYGFDPFNLWPQEKEAQKDLRTKELKNGRLAMIAIVAFAFQEAVSRVPVVEETPALFGLTPNEKIAEAEIGEVAAASFNVIEYFLHRLHL 272
BLAST of jgi.p|Trimin1|47509 vs. uniprot
Match: A0A1Z5JFF2_FISSO (Light-harvesting complex II chlorophyll a/b binding protein 5 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JFF2_FISSO) HSP 1 Score: 180 bits (456), Expect = 3.370e-52 Identity = 99/191 (51.83%), Postives = 125/191 (65.45%), Query Frame = 0 Query: 45 MSQSVPFLPRNPVLDSVDLAGDVGFDPLNLAKDEDTLLFYRDAEVKHARLAMLAALGWVVEELFDGRLAQAAGAPDLLVRPDAEGIGLAPSLLNGGLSNIPLAYWLIVVGLTGALEVQFAAITKDIVKQGREPGDYGFDPFGLWPEDPEEQKLARLRELKNGRLGMIAIVAFAFQEAVSRVPVVEETPALF 235 MS+S+PF+ R LD LAGDVGFDP AKD +L+ YR+AE+KHARLAMLAA GW + ELF+ + A GAP ++ D APS+LNGGL I YW++ + A+E + K K PG+ GFDP GL+P+DPE Q+ +L E+KNGRL MIAI AFAFQE VS++ VVEETP F Sbjct: 64 MSESLPFMTRPVALDGT-LAGDVGFDPFGFAKDNASLMKYREAEIKHARLAMLAAAGWPMSELFNTKFASTFGAPSIVDATDR-----APSVLNGGLGKISPVYWVVCLVAAAAIEAYGFSQAK---KADYFPGNLGFDPLGLYPKDPEGQRRLQLNEIKNGRLAMIAITAFAFQEFVSKLGVVEETPFFF 245
BLAST of jgi.p|Trimin1|47509 vs. uniprot
Match: A0A7S2PPT6_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PPT6_9STRA) HSP 1 Score: 175 bits (444), Expect = 9.680e-51 Identity = 105/220 (47.73%), Postives = 138/220 (62.73%), Query Frame = 0 Query: 21 APSSSSLGVAPRASSSLRMMSDEVMSQSVPFLPRNPVLDSVDLAGDVGFDPLNLAKDEDTLLFYRDAEVKHARLAMLAALGWVVEELFDGRLAQAAGAPDLLVRPDAEGIGLAPSLLNGGLSNIPLAYWLIVVGLTGALEV---QFAAITKDIVKQGREPGDYGFDPFGLWPEDPEEQ--KLARLRELKNGRLGMIAIVAFAFQEAVSRVPVVEETPALF 235 A SSS+L +A +++ ++ MSQ+VPFL R VLD VDLAGDVGFDPLNLA D L+ R+AE+KHARLAMLAA GW + EL D ++A A L D PSLLNGGL I +W VGLT A+++ + A D + PGD GFDPFGL+PE+ +E+ K +L E+K+GR+ M+A+ +A QEAV + VV+ETP F Sbjct: 8 ASSSSTLLLASLIITNVNALAGPQMSQAVPFLARPKVLDQVDLAGDVGFDPLNLAGTVDNLMEMREAEIKHARLAMLAAAGWPISELLDNKIASALNLSSTLDAADR-----VPSLLNGGLDKISPLWWGFCVGLTAAIDLYGQKRARFVADYI-----PGDLGFDPFGLYPEEMDEEGRKRMQLAEVKHGRIAMLAVTGYAIQEAVLKEGVVDETPFFF 217
BLAST of jgi.p|Trimin1|47509 vs. uniprot
Match: A0A7S4JV13_9STRA (Hypothetical protein n=4 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JV13_9STRA) HSP 1 Score: 173 bits (439), Expect = 1.380e-49 Identity = 101/194 (52.06%), Postives = 126/194 (64.95%), Query Frame = 0 Query: 45 MSQSVPFLPRNPVLDSVDLAGDVGFDPLNLAKDEDTLLFYRDAEVKHARLAMLAALGWVVEELFDGRLAQAAGAPDLLVRPDAEGIGLAPSLLNGGLSNIPLAYWLIVVGLTGALEVQFAAITKDIVKQGRE---PGDYGFDPFGLWPEDPEEQKLARLRELKNGRLGMIAIVAFAFQEAVSRVPVVEETPALF 235 MSQS+PF+ R L +AGDVGFDPL AK E L+ YR+AEVKHARLAMLAA GW + E+FD ++A A L + P + APSLLNGGL + YW+ +GL A V F I K K+ PG+ GFDPFG++P+D + Q+ +L E+KNGRL MIAI AFA QEAVS+V VV+ETP F Sbjct: 67 MSQSMPFMERPAALTGA-IAGDVGFDPLGFAKSESDLMNYREAEVKHARLAMLAAAGWPLSEVFDRKIATA-----LNLAPAVDANDRAPSLLNGGLGKVSPLYWVACLGLAAA--VDFYGIQKS--KENNPDYFPGNLGFDPFGVYPKDKDGQERMQLAEIKNGRLAMIAIFAFAVQEAVSKVGVVDETPLFF 250
BLAST of jgi.p|Trimin1|47509 vs. uniprot
Match: A0A7S1ZQD0_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZQD0_TRICV) HSP 1 Score: 170 bits (430), Expect = 2.820e-48 Identity = 99/194 (51.03%), Postives = 124/194 (63.92%), Query Frame = 0 Query: 45 MSQSVPFLPRNPVLDSVDLAGDVGFDPLNLAKDEDTLLFYRDAEVKHARLAMLAALGWVVEELFDGRLAQAAGAPDLLVRPDAEGIGLAPSLLNGGLSNIPLAYWLIVVGLTGALEVQFAAITKDIVKQGRE---PGDYGFDPFGLWPEDPEEQKLARLRELKNGRLGMIAIVAFAFQEAVSRVPVVEETPALF 235 MS+S+PF+ R VL L GDVGFDP AK E L+ YR+AEVKHARLAMLAA GW + E+FD ++A A G +L D PSLLNGGL I YW+ + L GA++ F I + K G PG+ GFDPFG++P+D E Q+ +L E+KNGRL MIA+ FA QEAVS+V VV+ETP F Sbjct: 63 MSESMPFMARPAVLTG-SLPGDVGFDPFGFAKSESDLMNYREAEVKHARLAMLAAAGWPLSEVFDKKIAGALGMVPMLDANDR-----VPSLLNGGLGKISPLYWVGCIALAGAID--FYGIQRS--KGGNADYFPGNLGFDPFGVYPKDSEGQRWMQLAEIKNGRLAMIAVFGFAIQEAVSKVGVVDETPFFF 246
BLAST of jgi.p|Trimin1|47509 vs. uniprot
Match: A0A1Z5K7G5_FISSO (Light-harvesting complex I chlorophyll a/b binding protein 1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K7G5_FISSO) HSP 1 Score: 168 bits (425), Expect = 6.690e-48 Identity = 88/192 (45.83%), Postives = 127/192 (66.15%), Query Frame = 0 Query: 45 MSQSVPFLPRNPVLDSVDLAGDVGFDPLNLA-KDEDTLLFYRDAEVKHARLAMLAALGWVVEELFDGRLAQAAGAPDLLVRPDAEGIGLAPSLLNGGLSNIPLAYWLIVVGLTGALEVQFAAITKDIVKQGREPGDYGFDPFGLWPEDPEEQKLARLRELKNGRLGMIAIVAFAFQEAVSRVPVVEETPALF 235 MS+++PF+ R +LD LAGDVGFDP A D TL++ R+AE+KH RLAMLA +GW + ELFD +A+ G P L + G +PS+LNGGL I +AYW+ V L G +E++ A + K+ + PGD GFDP L+P+ ++K+ + +E+K+GR+ M+AI+ F QEA+ R+PVV+ETP F Sbjct: 47 MSKALPFVKRPKLLDGT-LAGDVGFDPFGFAGNDIPTLVYMREAEIKHCRLAMLAVVGWPIAELFDKPIAETLGLPTALTKS-----GASPSVLNGGLDRIDIAYWVAVAALAGIVELENAKV-KEAKGKKYTPGDCGFDPLNLYPKSDADKKVMQTKEIKHGRVAMMAILGFVAQEALYRIPVVQETPMFF 231
BLAST of jgi.p|Trimin1|47509 vs. uniprot
Match: A0A7S3YYW7_9EUKA (Hypothetical protein n=2 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YYW7_9EUKA) HSP 1 Score: 168 bits (426), Expect = 1.520e-47 Identity = 94/191 (49.21%), Postives = 123/191 (64.40%), Query Frame = 0 Query: 45 MSQSVPFLPRNPVLDSVDLAGDVGFDPLNLAKDEDTLLFYRDAEVKHARLAMLAALGWVVEELFDGRLAQAAGAPDLLVRPDAEGIGLAPSLLNGGLSNIPLAYWLIVVGLTGALEVQFAAITKDIVKQGREPGDYGFDPFGLWPEDPEEQKLARLRELKNGRLGMIAIVAFAFQEAVSRVPVVEETPALF 235 MSQ++PFLPR LD VD+AGD GFDPL LA D++TL+ YR AE+KH RLAMLAA W ++EL + LA+ G P L+ +E G +PS+LNGGL + YW VV LT +E + D EPGDY FDP GL P+D ++ +L+E+K+GRL MIAI+ F QE V + VV++TP F Sbjct: 89 MSQAIPFLPRPENLDLVDMAGDYGFDPLKLAGDKETLVQYRLAEIKHGRLAMLAAAAWPLQELTNPVLAEKLGLPSLV----SETGGRSPSVLNGGLEQVSYTYWTAVVLLTIVIET----LGNDSWGGKIEPGDYRFDPLGLMPKDEAGKRDMKLKEIKHGRLAMIAILGFVVQEFVKKTAVVDQTPMFF 271
BLAST of jgi.p|Trimin1|47509 vs. uniprot
Match: B7G4U8_PHATC (Protein fucoxanthin chlorophyll a/c protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G4U8_PHATC) HSP 1 Score: 167 bits (423), Expect = 2.740e-47 Identity = 100/192 (52.08%), Postives = 119/192 (61.98%), Query Frame = 0 Query: 45 MSQSVPFLPRNPVLDSVDLAGDVGFDPLNLAKDEDTLLFYRDAEVKHARLAMLAALGWVVEELFDGRLAQAAGAPDLLVRPDAEGIGLAPSLLNGGLSNIPLAYWLIVVGLTGALEVQFAAITKDIVKQGRE-PGDYGFDPFGLWPEDPEEQKLARLRELKNGRLGMIAIVAFAFQEAVSRVPVVEETPALF 235 MSQS+PF+ R LD L GDVGFDPL AK + L+ YR+AEVKHARLAMLAA GW + ELFD ++A G LL D APSLLNGGL + YW V L A + I+K + PG+ G DPFGL+P+D Q+ +L+ELKNGRL MIAI AFAFQE VS+ VV ETP F Sbjct: 59 MSQSLPFMERPAALDGT-LVGDVGFDPLGFAKTKADLINYREAEVKHARLAMLAAAGWPLSELFDAKIANWMGMTPLLDANDR-----APSLLNGGLGKVSPVYW--VACLVAAAAIDVYGISKARKNEPDYFPGNLGIDPFGLFPKDAAAQEDMKLKELKNGRLAMIAISAFAFQEFVSKFGVVSETPIFF 242
BLAST of jgi.p|Trimin1|47509 vs. uniprot
Match: A0A7S4ABF7_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ABF7_9STRA) HSP 1 Score: 166 bits (420), Expect = 2.980e-47 Identity = 94/195 (48.21%), Postives = 122/195 (62.56%), Query Frame = 0 Query: 42 DEVMSQSVPFLPRNPVLDSVDLAGDVGFDPLNLAKDEDTLLFY-RDAEVKHARLAMLAALGWVVEELFDGRLAQAAGAPDLLVRPDAEGIGLAPSLLNGGLSNIPLAYWLIVVGLTGALEVQFAAITKDIVKQGREPGDYGFDPFGLWPEDPEEQKLARLRELKNGRLGMIAIVAFAFQEAVSRVPVVEETPALF 235 D MSQ++PF R +LD +AGDVGFDP LA D+ L Y R+AE+KH+RLAMLAA GW + EL+D ++A A G P LL G APSLLNGGL I AYW+ +V L G +E++ + ++ K GD FDP L P+D E Q +E+K+GR+ M+AI+ FA QEA+ R PVV ETP F Sbjct: 36 DGDMSQALPFAQRPKILDGT-MAGDVGFDPFGLAGDDKAKLMYMREAEIKHSRLAMLAAAGWPISELWDKQIADAVGLPSLLTNA-----GDAPSLLNGGLDKISAAYWVAIVSLAGIIELENMKMKEEKGK-AYIAGDCNFDPLNLLPQDKEGQMQMMTKEIKHGRIAMMAILGFAIQEALYRTPVVAETPFFF 223 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|47509 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Trimin1|47509|CE47508_322 ID=Trimin1|47509|CE47508_322|Name=jgi.p|Trimin1|47509|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=270bpback to top |