mRNA_17576 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|180563
Unique NamemRNA_17576
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|180563 vs. uniprot
Match: A0A836CG28_9STRA (Peroxyredoxin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG28_9STRA)

HSP 1 Score: 324 bits (831), Expect = 2.510e-112
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 1 
Query:    1 MALKEGDMVPMDAVFSRLVDGKPTNVPAADLFAGKKVAICGVPGAMTPTCSEKHLPGFIAALEELKSKGVDTVACISVNDPFVMGAWGKKLECDDKVMMLADGGANFAKAIGHEFDTKDFGGIRLKRLAMLVKDGVVQKLGVEDGGAFEGASDVKTILEAL 483
            MALKEGDMVPMDAVFSRLVDGKPTNVPAADLFAGKKVAICGVPGAMTPTCSEKHLPGFIAALEELKSKGVDTVACISVNDPFVMGAWGKKLECDDKVMMLADGGANFAKAIGHEFDTKDFGGIRLKRLAMLVKDGVVQKLGVEDGGAFEGASDVKTILEAL
Sbjct:    1 MALKEGDMVPMDAVFSRLVDGKPTNVPAADLFAGKKVAICGVPGAMTPTCSEKHLPGFIAALEELKSKGVDTVACISVNDPFVMGAWGKKLECDDKVMMLADGGANFAKAIGHEFDTKDFGGIRLKRLAMLVKDGVVQKLGVEDGGAFEGASDVKTILEAL 161
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BLAST of jgi.p|Trimin1|180563 vs. uniprot
Match: A0A836CPD9_9STRA (Peroxyredoxin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPD9_9STRA)

HSP 1 Score: 240 bits (612), Expect = 2.230e-78
Identity = 118/161 (73.29%), Postives = 130/161 (80.75%), Query Frame = 1 
Query:    1 MALKEGDMVPMDAVFSRLVDGKPTNVPAADLFAGKKVAICGVPGAMTPTCSEKHLPGFIAALEELKSKGVDTVACISVNDPFVMGAWGKKLECDDKVMMLADGGANFAKAIGHEFDTKDFGGIRLKRLAMLVKDGVVQKLGVEDGGAFEGASDVKTILEAL 483
            M LKEGD +PMDA F RLVDGKPT V AADLFAGKKV ICGVPGAMTPTCSE H+P FI A+++ K+KGVDTVA ISVNDPFVM AWGKKLE  D +MML DG A FAK+ G   DT DFGG+RLKR+AMLV DGVV+KLGVEDGG F   SD K+IL AL
Sbjct:   40 MVLKEGDKLPMDATFQRLVDGKPTPVSAADLFAGKKVVICGVPGAMTPTCSESHVPTFINAIDDFKAKGVDTVAVISVNDPFVMSAWGKKLEVGDSIMMLGDGSAAFAKSTGLNMDTGDFGGVRLKRMAMLVNDGVVEKLGVEDGGGFTDISDAKSILAAL 200
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BLAST of jgi.p|Trimin1|180563 vs. uniprot
Match: A0A7S2UXP0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXP0_9STRA)

HSP 1 Score: 225 bits (573), Expect = 1.790e-72
Identity = 107/154 (69.48%), Postives = 123/154 (79.87%), Query Frame = 1 
Query:   13 EGDMVPMDAVFSRLVDGKPTNVPAADLFAGKKVAICGVPGAMTPTCSEKHLPGFIAALEELKSKGVDTVACISVNDPFVMGAWGKKLECDDKVMMLADGGANFAKAIGHEFDTKDFGGIRLKRLAMLVKDGVVQKLGVEDGGAFEGASDVKTIL 474
            EGD +P+D VF  L DGKP+ +PA++LFAGKKVAICG+PGA TPTCS  HLPGFI   E++K+KGVDTV CISVNDPFVMGAWGK+L  DDKV MLADGGA FAKA G +FDT  FGG RLKRL+MLV DGV+ KL VEDG AF   S  +T+L
Sbjct:   41 EGDKIPLDGVFQLLADGKPSELPASELFAGKKVAICGLPGAFTPTCSNTHLPGFIEVAEDIKAKGVDTVCCISVNDPFVMGAWGKQLGADDKVTMLADGGAAFAKATGLDFDTGSFGGTRLKRLSMLVDDGVISKLNVEDGSAFTDISSAETLL 194
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BLAST of jgi.p|Trimin1|180563 vs. uniprot
Match: A0A7S2UXL6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXL6_9STRA)

HSP 1 Score: 225 bits (573), Expect = 2.040e-72
Identity = 107/154 (69.48%), Postives = 123/154 (79.87%), Query Frame = 1 
Query:   13 EGDMVPMDAVFSRLVDGKPTNVPAADLFAGKKVAICGVPGAMTPTCSEKHLPGFIAALEELKSKGVDTVACISVNDPFVMGAWGKKLECDDKVMMLADGGANFAKAIGHEFDTKDFGGIRLKRLAMLVKDGVVQKLGVEDGGAFEGASDVKTIL 474
            EGD +P+D VF  L DGKP+ +PA++LFAGKKVAICG+PGA TPTCS  HLPGFI   E++K+KGVDTV CISVNDPFVMGAWGK+L  DDKV MLADGGA FAKA G +FDT  FGG RLKRL+MLV DGV+ KL VEDG AF   S  +T+L
Sbjct:   45 EGDKIPLDGVFQLLADGKPSELPASELFAGKKVAICGLPGAFTPTCSNTHLPGFIEVAEDIKAKGVDTVCCISVNDPFVMGAWGKQLGADDKVTMLADGGAAFAKATGLDFDTGSFGGTRLKRLSMLVDDGVISKLNVEDGSAFTDISSAETLL 198
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BLAST of jgi.p|Trimin1|180563 vs. uniprot
Match: D8LG20_ECTSI (Peroxyredoxin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG20_ECTSI)

HSP 1 Score: 187 bits (476), Expect = 1.220e-57
Identity = 93/161 (57.76%), Postives = 113/161 (70.19%), Query Frame = 1 
Query:    1 MALKEGDMVPMDAVFSRLVDGKPTNVPAADLFAGKKVAICGVPGAMTPTCSEKHLPGFIAALEELKSKGVDTVACISVNDPFVMGAWGKKLECDDKVMMLADGGANFAKAIGHEFDTKDFGGIRLKRLAMLVKDGVVQKLGVEDGGAFEGASDVKTILEAL 483
            MA+KEGD  PMD+ F    D  P +VPA+++FAGKKV ICGVPGA TPTC + HLP FIA  ++ K KGVDTVAC+SVND FVM  W K L+ +DKV MLADGGA FA+  G    T  FGG RL+RLAM+V DG ++KL +EDG  +   S   T+L AL
Sbjct:   45 MAIKEGDKFPMDSTFQIKGDAGPADVPASEIFAGKKVVICGVPGAFTPTCDDNHLPSFIANADKFKEKGVDTVACMSVNDAFVMSRWIKSLDAEDKVTMLADGGAVFAEESGLCVKTGKFGGTRLQRLAMIVNDGTIEKLFLEDGTGYTDVSSGDTVLAAL 205
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BLAST of jgi.p|Trimin1|180563 vs. uniprot
Match: B7ZGN1_9PHAE (Peroxyredoxin n=1 Tax=Laminaria digitata TaxID=80365 RepID=B7ZGN1_9PHAE)

HSP 1 Score: 186 bits (472), Expect = 1.230e-57
Identity = 95/161 (59.01%), Postives = 111/161 (68.94%), Query Frame = 1 
Query:    1 MALKEGDMVPMDAVFSRLVDGKPTNVPAADLFAGKKVAICGVPGAMTPTCSEKHLPGFIAALEELKSKGVDTVACISVNDPFVMGAWGKKLECDDKVMMLADGGANFAKAIGHEFDTKDFGGIRLKRLAMLVKDGVVQKLGVEDGGAFEGASDVKTILEAL 483
            MA+KEGD  P    F  L DG P +VPAAD+FAGKKV ICGVPGA TPTCS+ HLP FIA  +E K+KGVDTVAC+SVND FVM  W K L+  DKV MLADGG  FA+  G    T  FGG RL+RLAM+V DG ++KL +EDG  +   S    +L AL
Sbjct:    1 MAIKEGDKFPAGTSFQILGDGGPADVPAADVFAGKKVVICGVPGAFTPTCSDDHLPSFIALADEFKAKGVDTVACLSVNDAFVMSRWIKSLDAADKVTMLADGGGVFAEESGLCVKTGKFGGTRLQRLAMIVNDGTIEKLFLEDGTGYTDLSSGAGVLAAL 161
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BLAST of jgi.p|Trimin1|180563 vs. uniprot
Match: A0A8J5XPE4_DIALT (Thioredoxin domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XPE4_DIALT)

HSP 1 Score: 185 bits (469), Expect = 9.680e-57
Identity = 92/159 (57.86%), Postives = 115/159 (72.33%), Query Frame = 1 
Query:    7 LKEGDMVPMDAVFSRLVDGKPTNVPAADLFAGKKVAICGVPGAMTPTCSEKHLPGFIAALEELKSKGVDTVACISVNDPFVMGAWGKKLECDDKVMMLADGGANFAKAIGHEFDTKDFGGIRLKRLAMLVKDGVVQKLGVEDGGAFEGASDVKTILEAL 483
            L  GD +PM   F  ++D  P  +PA D+FAGKKV + G+PGAMTPTCSEK LPGFI+     K+KGVDT+AC+SVNDPFVM AW K  +    V+MLADGGA F KA G  FDT +FGG+R  R AM+V+DG V  LG+E GGAF+GAS  +++L+AL
Sbjct:   36 LAVGDSLPMTGEFM-VIDSGPKPLPAKDVFAGKKVVLFGLPGAMTPTCSEKQLPGFISQAAAFKAKGVDTIACLSVNDPFVMAAWSKDKDPSGAVLMLADGGAAFTKAAGLSFDTGNFGGVRCVRCAMVVEDGKVTALGLEKGGAFDGASSAESMLKAL 193
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BLAST of jgi.p|Trimin1|180563 vs. uniprot
Match: A0A069E8G9_9PROT (Glutathione-dependent peroxiredoxin n=8 Tax=Hyphomonadaceae TaxID=69657 RepID=A0A069E8G9_9PROT)

HSP 1 Score: 167 bits (424), Expect = 2.330e-50
Identity = 86/153 (56.21%), Postives = 104/153 (67.97%), Query Frame = 1 
Query:    1 MALKEGDMVPMDAVFSRLVDGKPTNVPAADLFAGKKVAICGVPGAMTPTCSEKHLPGFIAALEELKSKGVDTVACISVNDPFVMGAWGKKLECDDKVMMLADGGANFAKAIGHEFDTKDFG-GIRLKRLAMLVKDGVVQKLGVEDGGAFEGAS 456
            M++K GD +P DA F  + +  P     AD+F GK VA+  VPGA TPTCS KHLPGF+  L++LK KGVD V C SVND FVMGAWGK  + D KV MLADG   FAKA+G E D   FG G R +R +M+VKDGVV +L VE GG F+ +S
Sbjct:    1 MSIKVGDKLP-DATFMEMTEDGPAPCTTADVFGGKTVALFAVPGAFTPTCSAKHLPGFVEKLDDLKGKGVDDVVCTSVNDVFVMGAWGKSADADGKVRMLADGNGTFAKALGLEMDGSGFGMGQRSQRYSMIVKDGVVSELNVEQGGEFKVSS 152
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BLAST of jgi.p|Trimin1|180563 vs. uniprot
Match: A0A6P2BEJ6_9GAMM (Glutathione-dependent peroxiredoxin n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A6P2BEJ6_9GAMM)

HSP 1 Score: 166 bits (419), Expect = 1.300e-49
Identity = 89/163 (54.60%), Postives = 116/163 (71.17%), Query Frame = 1 
Query:    1 MALKEGDMVPMDAVFSRLVDGK-PTNVPAADLFAGKKVAICGVPGAMTPTCSEKHLPGFIAALEELKSKGVDTVACISVNDPFVMGAWGKKLECDDKVMMLADGGANFAKAIGHEFDTKDFG-GIRLKRLAMLVKDGVVQKLGVEDGGAFEGASDVKTILEAL 483
            MA+KEGD +P DA   +++ GK PT++  AD+F GKKV +  VPGA TPTCS+ HLPGF+   +++K+KGVDT+AC+SVND FVM  WGK    ++ +MMLAD  A+ A+A+G EFD   FG G+R +R AM+V DGVV KL VE  G FE  S  + ILEAL
Sbjct:    1 MAIKEGDRIP-DAKL-KIMGGKGPTDISTADVFGGKKVVLFAVPGAFTPTCSQAHLPGFVTLADKIKAKGVDTIACLSVNDAFVMDCWGKDKNAEE-IMMLADWNADLARAMGLEFDASAFGLGVRAQRFAMIVDDGVVSKLAVEAPGQFE-VSKAEAILEAL 159
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BLAST of jgi.p|Trimin1|180563 vs. uniprot
Match: M2XVK1_GALSU (Peroxiredoxin (Alkyl hydroperoxide reductase subunit C) n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XVK1_GALSU)

HSP 1 Score: 166 bits (421), Expect = 1.630e-49
Identity = 80/159 (50.31%), Postives = 110/159 (69.18%), Query Frame = 1 
Query:    7 LKEGDMVPMDAVFSRLVDGKPTNVPAADLFAGKKVAICGVPGAMTPTCSEKHLPGFIAALEELKSKGVDTVACISVNDPFVMGAWGKKLECDDKVMMLADGGANFAKAIGHEFDTKDFGGIRLKRLAMLVKDGVVQKLGVEDGGAFEGASDVKTILEAL 483
            LKEG  +  D  F  L +GKP  + +  +F+GKKV + G+PGA TPTCS +HLPGF   ++E+KSKGVDTVAC++VNDPFV+  W +      K++MLADGGA   K +G + DT DFGGIR +R + L+ + VV+K+ +E+G  F GAS  +TIL+ L
Sbjct:   31 LKEGSRILSDLKFQILQEGKPQVITSDQVFSGKKVVLFGLPGAFTPTCSRQHLPGFGQKVDEIKSKGVDTVACLAVNDPFVLQQWAESQGVAGKILMLADGGAQSVKKLGLDIDTGDFGGIRCRRFSSLIDNFVVKKIHLEEGTGFSGASSAETILKDL 189
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|180563 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CG28_9STRA2.510e-112100.00Peroxyredoxin n=1 Tax=Tribonema minus TaxID=303371... [more]
A0A836CPD9_9STRA2.230e-7873.29Peroxyredoxin n=1 Tax=Tribonema minus TaxID=303371... [more]
A0A7S2UXP0_9STRA1.790e-7269.48Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2UXL6_9STRA2.040e-7269.48Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
D8LG20_ECTSI1.220e-5757.76Peroxyredoxin n=1 Tax=Ectocarpus siliculosus TaxID... [more]
B7ZGN1_9PHAE1.230e-5759.01Peroxyredoxin n=1 Tax=Laminaria digitata TaxID=803... [more]
A0A8J5XPE4_DIALT9.680e-5757.86Thioredoxin domain-containing protein n=2 Tax=Diac... [more]
A0A069E8G9_9PROT2.330e-5056.21Glutathione-dependent peroxiredoxin n=8 Tax=Hyphom... [more]
A0A6P2BEJ6_9GAMM1.300e-4954.60Glutathione-dependent peroxiredoxin n=1 Tax=Gammap... [more]
M2XVK1_GALSU1.630e-4950.31Peroxiredoxin (Alkyl hydroperoxide reductase subun... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_220contigContig_220:1843..6329 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|180563|e_gw1.220.69.1
Descriptionperoxiredoxin activity
COG categoryO
Max annot lvl2759|Eukaryota
EggNOG OGsCOG0678@1|root,KOG0541@2759|Eukaryota
Evalue2e-58
Seed ortholog2880.D8LG20
Hectar predicted targeting categoryother localisation
TranscriptId180885
TrackFilteredModels1
ProteinId180563
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|180563gene_17576Tribonema minus UTEX_B_3156 geneContig_220 1843..6329 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|180563Trimin1|180563|e_gw1.220.69.1Tribonema minus UTEX_B_3156 polypeptideContig_220 1843..6329 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_17576_4exon_17576_4Tribonema minus UTEX_B_3156 exonContig_220 1843..1929 -
exon_17576_3exon_17576_3Tribonema minus UTEX_B_3156 exonContig_220 2243..2353 -
exon_17576_2exon_17576_2Tribonema minus UTEX_B_3156 exonContig_220 4534..4713 -
exon_17576_1exon_17576_1Tribonema minus UTEX_B_3156 exonContig_220 6222..6329 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_17576CDS_17576Tribonema minus UTEX_B_3156 CDSContig_220 6222..6329 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_17576 ID=mRNA_17576|Name=jgi.p|Trimin1|180563|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=486bp|location=Sequence derived from alignment at Contig_220:1843..6329- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGCTCTCAAGGAGGGAGACATGGTACCGATGGACGCAGTCTTCTCTCG
CCTGGTCGATGGCAAGCCCACGAATGTGCCTGCGGCAGACCTATTTGCGG
GCAAGAAGGTGGCTATTTGCGGCGTGCCGGGGGCGATGACGCCCACGTGC
TCGGAGAAGCACCTCCCGGGGTTCATAGCGGCGCTGGAGGAGCTTAAGTC
CAAGGGCGTGGACACGGTGGCGTGCATCAGCGTCAACGACCCCTTTGTCA
TGGGCGCATGGGGCAAGAAGCTGGAGTGCGATGACAAGGTAATGATGCTG
GCAGATGGGGGTGCCAACTTTGCCAAGGCCATCGGGCACGAGTTTGACAC
CAAGGACTTTGGCGGCATCCGCCTCAAGCGCCTCGCAATGCTGGTCAAGG
ATGGCGTCGTACAGAAGCTGGGAGTAGAGGACGGAGGCGCCTTTGAGGGC
GCATCAGACGTCAAGACAATACTGGAAGCCCTGTGA
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protein sequence of jgi.p|Trimin1|180563

>Trimin1|180563|e_gw1.220.69.1 ID=Trimin1|180563|e_gw1.220.69.1|Name=jgi.p|Trimin1|180563|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=162bp
MALKEGDMVPMDAVFSRLVDGKPTNVPAADLFAGKKVAICGVPGAMTPTC
SEKHLPGFIAALEELKSKGVDTVACISVNDPFVMGAWGKKLECDDKVMML
ADGGANFAKAIGHEFDTKDFGGIRLKRLAMLVKDGVVQKLGVEDGGAFEG
ASDVKTILEAL*
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mRNA from alignment at Contig_220:1843..6329-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_17576 ID=mRNA_17576|Name=jgi.p|Trimin1|180563|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4487bp|location=Sequence derived from alignment at Contig_220:1843..6329- (Tribonema minus UTEX_B_3156 )
ATGGCTCTCAAGGAGGGAGACATGGTACCGATGGACGCAGTCTTCTCTCG
CCTGGTCGATGGCAAGCCCACGAATGTGCCTGCGGCAGACCTATTTGCGG
GCAAGAAGGTGAGCAATCCGACCCTGGCTGGCTTTCTGCCCAGCTCTGGT
GACACTGACATGTGAGGGGGTCAAGTGTGTGCGCGCCGCCGCCGCTGCGG
TGTGCGCGGGCAGGTACTCCCATGGCTTCGGTCATGGCATGGCACTGTGG
TCGAAGCACCACTTTGGCTTGGTGGCCCACGAGGCAACTGGATGACTGGC
GGGCCTGCCAGTGAGCTCTTGCACAATACTGCCGGCACGATCATATCTGT
CAACAAGTGAAGTCTCTGAGCCACAGGCACATACACACATAGTGCCTGAG
GAGTTTATGGGAACAGTCACCACTCGTCTGTAGCGGATGCCGATGAGGTA
GGCTTATGCTGATGTTGAGGTTACCAGAAGCGCTGCTTTGTTGCGCTGCC
TGATGTCACTCACGTTCAAATCAGCAGATGTACCCAAAGTCACACGTGCA
AGCATCACTGTAACATGCGCAGTGCACTGTGGAGCAGCGCACATCATTCA
GACACCGCCGCTCCTACAGGTCGCAGACACGAGAGGGCCCAGAGAGCAGC
GATCAGCTTCTCGCTTGCAACAGCCGCAACACCTTTGACAGATGTGCACA
GATTGTAGCGTACGCACGCAGCGCACCATCTGGTGCGTGCTCATAGGCTA
TGGCAGGCAGAAGCTGTTGCTGAGAGTTGTTGTGCTCGTTGGCACACATC
TGCATCAGGATCAAATCAGGCCAGATCATGAGCTGCTGACAGCAGGCATG
CATGTGCTTGCCGGCACATGTGCACCCGTTGCCAGTTGGGACTGACGCAT
TTGTGCCAGTGCACGCGATCACACTTGATGACAACAGATCCATCAGCTGA
GAACTGCCGCATTTCATGACCCTTGTGTCACGCTCCACTGCGCAACTTGA
AGCTGTTTTTTCTACATTGCAACTGGATCGCTGGCAAAGAAGCGCGTGAC
ACGCAATATGCAGAGACACCACATTATAGTAAGCACTGTGATAAGCAGGC
ATCCAGTGGAAAACGGACCGCCTGCACACCACCTCCATCGACAAAGCCAT
TCCCACCCCTTACTTACCACACAAGTCATCCCACAGTACCCCCTTCTGTG
TCCCCCTCGCCTTTCAAGGCTTTGCTCCAGCACTGGCGCAGGGACCATTA
CAGGATGGGCTGTTCATTCCAGCGCTCCACCCCCACTACCCCCCCGCACT
CTCCCCTTGACGGTGGCGATGTGCGGCGTGCTGTTGAACCCATCCGAATA
CCCCCTCGCACTCTCCCCTTGAAGGTGGCGATTTGCGGCGAGCCGGGGGG
CGATGACCCCCACGTGCTCGGAGAAGCACCTCCGACAGCACCATCATAAA
GCAGGCATCCAGTGTAACTGTCTGGCCGCACACTACCTCCATCAACCAGG
CCAATCGCCATTCCCAGCCCTGCTACACAAGTCGTCCCATGCTAACCCTT
TTTTGCGTCCCACGATGAGCTCTTGAACCCAGCGATCCGACCGCCGCTCA
CTCTCTCTTCTCAAAGGTGGCTATTTGCGGCGTGCCGGGGGCGATGACGC
CCACGTGCTCGGAGAAGCACCTCCCGGGGTTCATAGCGGCGCTGGAGGAG
CTTAAGTCCAAGGGCGTGGACACGGTGGCGTGCATCAGCGTCAACGACCC
CTTTGTCATGGGCGCATGGGGCAAGAAGCTGGAGTGCGATGACAAGGTGA
CTGTGGAAGTTGCGGGAAAATGATAAGACTGAATTGTTTCAGGGAAATTT
CTCTGAAAGTTCAACATTGCAGTTCGGAACAAGTCATCATGTCGACCCAG
CTTTGTGCGCTCAATCAATGAAGCTTACCTGAAGCACCTTGCGGTTCACT
CGCCTTGGACTACAACGTGCCGTGTGTGCCCTATGGAGTTGTCGATGATG
AAGTGGTCACGCGAGTGCCCAACTTCAGATGCGAAGGCTCTGTCTTCAAA
GTCTTTGCGGAGTACACGTGCGTGGTGCCTTGCATTCGCTGTCGCGACGC
AACGCCTGCCTGACCCCACTCCATACCGTCAGTGCTACAGTACCACAGAT
GCGCAGTGTATGCATGGAATAGAGTGATGAGCAAGAAGCCCAATGCTGAG
GTGCTTTGAGGCAGTGAAAATTGCTTCCATATGAGAAGCACTCTGAGTAA
GAAGCTGCAGCGGCAACTATCATGTGATATACGCCGTTTCCCTGTGCCAG
CATCGACCAGTCACACTTGAAGTTGATAGTTGCAGAACGGTCATCAACTT
CAGTAAGTCCCCCTGGTGTCCGAGTGGTGATTGGAAGGCTGAGTGCAATG
GCGATGGCCATAAACGATGCGAAAGTGATCCCTTACACCACAACAACCAT
ACATGTACATGTATGTGCGCAACAGAGCGTGTCATCCGACATGCGTCAAT
GCGCAAGGTCGGCGCTTTCATTGAAGGGCACCAAACTAAGGATCTGCAAC
ACTCGGCGAATGTCTCGCAATCGCCTGCTGCATAAATCTTTATCTTTGCT
CCCATGAAAACCATGAACATAAACATCAGAGGACAAGTTTCAGTGCATTG
CCAACCATAGCTAGTTAGCCTCTTGTCCTCGAAAACAGTGCTTGCTGCCA
CATAACAATGACTCATGGGCAGTGCCATTGCCTTGCTTTTAAATTAAGTT
TTAATAGAACTTCACTCGCGCAGTCAGGGGGTGGTGTGGTCCAACTTCAA
GTGGGGTCTTGTTAAACTCGAGAGCTGACTAGCCCAAGTGAGTTTGGCAT
CAATGGTCTGATGGCAACAAAATGCTATACCAGACCCGATGCTGCACAGG
CTTGTGTATTGTTTAGCCCAATCCACATTGCCAATGAGCGCCAACTAGAT
CGCACACGAGTACAGTGCAGACAGGTCTGCGTAAAAGCTGTGCGCAGAGA
ACTGTGTTGAAAGGCCGACCATGCTAGTCAGTGAGAGCACTGGCGTGTGC
TAATTTCAATCTCAAGCTCAGTCGAACTGCGATTCGGACAAAGCCATACA
GCTACTTGGCCACCCGTCCTTGCGCGCAATGTTGAGGCAGGCAAGCTAGG
CTTCGTCTGCATTGCCAGCTCTTTGGTGCACTTGATGCGACCACCAGTGA
GCATCAGGTCACAATAGAGCGCTGACATGTCAGTGCTGTCAGACGTTCTG
CTGCACCCGTTGGCGCTGACTGTGATTGGACCAACTCTGAGGGACACTTT
TACATGGTGGTGTGGTTGTCACTCACTGCGAGATTCTCGGACTGTACCTG
TTGGCACACATAAACGGTTGGTGGGCATGATACTGTCAGCGTCCATGCAA
TAGTTGAAGTACAATAGTTGAAGTATCACACTTGAGCAGGCTCAGCCAGG
CTGACGTCATAGGAGGTACAGCAGCTAGTGACAGCGTTCATGATCAAATA
TAGACGAGTACTCCTTTTTCTCCCCGGGTTCTACCCCAAGAAGTCCTGTC
GCGAGTCTTCAAAGTATTTGATGGTATACAACGTCAACAGCAGAGCCTGC
GAGGAGCAGGAACTGAACTTGAAGCCACCTTGTTGCCTTTACCAGCTCTG
CATACGCGACACACGCTCACGCGACTTCATCAAATGTTACCCTAATTGGT
TCAACCCAAAAAGTGACTTCATACATACACATACATATTCTGATGTAAGT
GCTGACCGTCGCCTGTGCCATTGCGCGTGCGCCGTTTACCAATACGGTTC
AACCCAGAAAATGGCTTCGTACACCGTTTTCTGATGTAAATGCTGACCAT
CGCCTGTGCCATTGCGCATTCGCCGTGTACTGTCAGGTAATGATGCTGGC
GGGGCTTTATGCACCGTTTTCTGATGCAAGAGCTGACCATTGCCTGTGTC
GTTGCTTATGCGCCGTTCACTGTCAGGTAATGATGCTGGCAGATGGGGGT
GCCAACTTTGCCAAGGCCATCGGGCACGAGTTTGACACCAAGGACTTTGG
CGGCATCCGCCTCAAGCGCCTCGCAATGCTGGTCAAGGTAAGGGCGCGTG
GCAACAACGCTGAGAGCTTGCACACAGAAGTCATTTTGACTACTGTGGAT
ACGGTGGCGCTGTTTGACTCGTGGCCAATTGCTTCAGCAGCGGCGACCAC
GGTGCACCTCGTGCACTGCCGCACATTCTGCATGCACATCTGCAGCATCA
AGACAGTATTGAGACGCCAGGGCAGGCATCATGACATTTGATGCTTACTT
CAAGTTTGAAGTATACTGTTGGCGTCCACGCGCACACCCCAGCCGCCTCG
CCCCTCACACGAAGCACGCTCTGCGCATCTCTCTTGCACGTGGTACGCAG
GATGGCGTCGTACAGAAGCTGGGAGTAGAGGACGGAGGCGCCTTTGAGGG
CGCATCAGACGTCAAGACAATACTGGAAGCCCTGTGA
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Coding sequence (CDS) from alignment at Contig_220:1843..6329-

>mRNA_17576 ID=mRNA_17576|Name=jgi.p|Trimin1|180563|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=486bp|location=Sequence derived from alignment at Contig_220:1843..6329- (Tribonema minus UTEX_B_3156 )
ATGGCTCTCAAGGAGGGAGACATGGTACCGATGGACGCAGTCTTCTCTCG
CCTGGTCGATGGCAAGCCCACGAATGTGCCTGCGGCAGACCTATTTGCGG
GCAAGAAGGTGGCTATTTGCGGCGTGCCGGGGGCGATGACGCCCACGTGC
TCGGAGAAGCACCTCCCGGGGTTCATAGCGGCGCTGGAGGAGCTTAAGTC
CAAGGGCGTGGACACGGTGGCGTGCATCAGCGTCAACGACCCCTTTGTCA
TGGGCGCATGGGGCAAGAAGCTGGAGTGCGATGACAAGGTAATGATGCTG
GCAGATGGGGGTGCCAACTTTGCCAAGGCCATCGGGCACGAGTTTGACAC
CAAGGACTTTGGCGGCATCCGCCTCAAGCGCCTCGCAATGCTGGTCAAGG
ATGGCGTCGTACAGAAGCTGGGAGTAGAGGACGGAGGCGCCTTTGAGGGC
GCATCAGACGTCAAGACAATACTGGAAGCCCTGTGA
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