mRNA_17301 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|354039
Unique Name	mRNA_17301
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|354039 vs. uniprot
Match: A0A835Z1Q7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1Q7_9STRA)

HSP 1 Score: 1450 bits (3754), Expect = 0.000e+0
Identity = 1170/1170 (100.00%), Postives = 1170/1170 (100.00%), Query Frame = 1

Query:    1 MIIAVPHGAPASPIASRGSPPPLSRVTVLNSMDTTASSLGFGFGSSALSAQRGGGRHEGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSDLAHMRAASVPTSCGSQRSGGXXXXXXXXXXXXXXXXSAFDWHRPGSAQRSSGHHHNVGRGAGNVNREDAEGAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSGSRSVRHESWTLEEDQRLLAAVRMEWRDNTDWHSVALVVGTRSKVQCRDRWHNALGPALAAFQQAGVWADGDAQYRLGAPGSAQLPQQPAQAGSAATFSHSSSVFGALNIGDTNQQGAQRREQELPVDNGHFHPAEDQLILRLQGQMGNCWGVIASQLPGRTLMRAALRTRSVGSASPARQSSWPSVTSTSMFAPGAPSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPRRQPQSGGAADRRNSFTSAAAAIGWLGVSPLSATRQPRAHARVDSGSGGADRSAVPAAXXXXXXEDGTGAGSRFDEFWRQFAELTSDSGGGLSGXXXXXXXXXXXXXXXXXXXXXXXSQRSDRPATASPRDTRRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQSRLDRAVLLREATIGAGRAAEHQRPHAHAPLQPPPARSVRQRRGSRGSAVNQTLTASERQXXXXXXXXXSGSLQRSRXXHRQQRWWGVARGDLGRKRRARGGLRGSTGDVGSSGSAAAHTPAQQAAATAGAADTEADIKAALHEWAEALESDAAAAAVTGASGTDATLRTGVQFSNAAHVEAPLPSRGFMWPASAGVQPPXXXXXXXXQKFNFNRRHSAGMLDEGNRGASTLSMASFSAAAAAEPRAGSVPAAYPQWAFGPAPPLVPRPPLAPTMGAAAAGARMLPHANTAFSAGAAAWRPHDTQAGAPAAAAATXXXXXXXXXXLQVPVREGSGFRXXXXXXXXXGRMAARPAVPGAAXXXXXXXXXXXXXXXXXXXXAQRMLQGQVRRWQQRAAQRSQDGLPAXXXXXARNNAWDAQVFLGEIARDLDFARYQHSGGSRDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRGAPLQHTRSCANEVRVTAM 3510
            MIIAVPHGAPASPIASRGSPPPLSRVTVLNSMDTTASSLGFGFGSSALSAQRGGGRHEGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSDLAHMRAASVPTSCGSQRSGGXXXXXXXXXXXXXXXXSAFDWHRPGSAQRSSGHHHNVGRGAGNVNREDAEGAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSGSRSVRHESWTLEEDQRLLAAVRMEWRDNTDWHSVALVVGTRSKVQCRDRWHNALGPALAAFQQAGVWADGDAQYRLGAPGSAQLPQQPAQAGSAATFSHSSSVFGALNIGDTNQQGAQRREQELPVDNGHFHPAEDQLILRLQGQMGNCWGVIASQLPGRTLMRAALRTRSVGSASPARQSSWPSVTSTSMFAPGAPSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPRRQPQSGGAADRRNSFTSAAAAIGWLGVSPLSATRQPRAHARVDSGSGGADRSAVPAAXXXXXXEDGTGAGSRFDEFWRQFAELTSDSGGGLSGXXXXXXXXXXXXXXXXXXXXXXXSQRSDRPATASPRDTRRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQSRLDRAVLLREATIGAGRAAEHQRPHAHAPLQPPPARSVRQRRGSRGSAVNQTLTASERQXXXXXXXXXSGSLQRSRXXHRQQRWWGVARGDLGRKRRARGGLRGSTGDVGSSGSAAAHTPAQQAAATAGAADTEADIKAALHEWAEALESDAAAAAVTGASGTDATLRTGVQFSNAAHVEAPLPSRGFMWPASAGVQPPXXXXXXXXQKFNFNRRHSAGMLDEGNRGASTLSMASFSAAAAAEPRAGSVPAAYPQWAFGPAPPLVPRPPLAPTMGAAAAGARMLPHANTAFSAGAAAWRPHDTQAGAPAAAAATXXXXXXXXXXLQVPVREGSGFRXXXXXXXXXGRMAARPAVPGAAXXXXXXXXXXXXXXXXXXXXAQRMLQGQVRRWQQRAAQRSQDGLPAXXXXXARNNAWDAQVFLGEIARDLDFARYQHSGGSRDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRGAPLQHTRSCANEVRVTAM
Sbjct:    1 MIIAVPHGAPASPIASRGSPPPLSRVTVLNSMDTTASSLGFGFGSSALSAQRGGGRHEGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSDLAHMRAASVPTSCGSQRSGGXXXXXXXXXXXXXXXXSAFDWHRPGSAQRSSGHHHNVGRGAGNVNREDAEGAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSGSRSVRHESWTLEEDQRLLAAVRMEWRDNTDWHSVALVVGTRSKVQCRDRWHNALGPALAAFQQAGVWADGDAQYRLGAPGSAQLPQQPAQAGSAATFSHSSSVFGALNIGDTNQQGAQRREQELPVDNGHFHPAEDQLILRLQGQMGNCWGVIASQLPGRTLMRAALRTRSVGSASPARQSSWPSVTSTSMFAPGAPSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPRRQPQSGGAADRRNSFTSAAAAIGWLGVSPLSATRQPRAHARVDSGSGGADRSAVPAAXXXXXXEDGTGAGSRFDEFWRQFAELTSDSGGGLSGXXXXXXXXXXXXXXXXXXXXXXXSQRSDRPATASPRDTRRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQSRLDRAVLLREATIGAGRAAEHQRPHAHAPLQPPPARSVRQRRGSRGSAVNQTLTASERQXXXXXXXXXSGSLQRSRXXHRQQRWWGVARGDLGRKRRARGGLRGSTGDVGSSGSAAAHTPAQQAAATAGAADTEADIKAALHEWAEALESDAAAAAVTGASGTDATLRTGVQFSNAAHVEAPLPSRGFMWPASAGVQPPXXXXXXXXQKFNFNRRHSAGMLDEGNRGASTLSMASFSAAAAAEPRAGSVPAAYPQWAFGPAPPLVPRPPLAPTMGAAAAGARMLPHANTAFSAGAAAWRPHDTQAGAPAAAAATXXXXXXXXXXLQVPVREGSGFRXXXXXXXXXGRMAARPAVPGAAXXXXXXXXXXXXXXXXXXXXAQRMLQGQVRRWQQRAAQRSQDGLPAXXXXXARNNAWDAQVFLGEIARDLDFARYQHSGGSRDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRGAPLQHTRSCANEVRVTAM 1170

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BLAST of jgi.p|Trimin1|354039 vs. uniprot
Match: A0A2R5GJM5_9STRA (Transcription factor MYB3R-4 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GJM5_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 7.850e-7
Identity = 49/155 (31.61%), Postives = 69/155 (44.52%), Query Frame = 1

Query:  769 WTLEEDQRLLAAVRMEWRDNTDWHSVALVVGTRSKVQCRDRWHNALGPALAAFQQAGVWADGDAQYRLGAPGSAQLPQQPAQAGSAATFSHSSSVFGALNIGDTNQQGAQRREQELP--VDNGHFHPAEDQLILRLQGQMGNCWGVIASQLPGRT 1227
            WT EED  L  AV      N  W  VA  +  R++ QC  RW   L P +    + G W+          P   ++ QQ  Q      +S  S     L  G   +Q  +R    L   V+   +   ED+LI++L+G++GN W  IA +LPGRT
Sbjct:   52 WTTEEDDILREAVARHKGKN--WKCVASALPNRTRAQCAHRWQKVLNPTI----KKGAWS----------PEEDEMLQQALQRYGCGKWSRVS----CLVPGRNGKQCRERWHNHLKPDVNKEPWSAEEDELIVKLRGELGNKWAAIARELPGRT 186

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BLAST of jgi.p|Trimin1|354039 vs. uniprot
Match: A0A6B2LNX0_9EUKA (Uncharacterized protein (Fragment) n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LNX0_9EUKA)

HSP 1 Score: 55.5 bits (132), Expect = 3.330e-5
Identity = 42/139 (30.22%), Postives = 59/139 (42.45%), Query Frame = 1

Query:  832 DWHSVALVVGTRSKVQCRDRWHNALGPALAAFQQAGVWADGDAQ-----YRLGAPGSAQLPQQPAQAGSAATFSHSSSVFGALNIGDTNQQGAQRREQELP--VDNGHFHPAEDQLILRLQGQMGNCWGVIASQLPGRT 1227
            +W  +A  V  RS+VQC  RW   L P L      G W + + +      +L  P                      S+  +   G   +Q  +R    L   +  G++ P ED+LI +LQG+MGN W  IA  LPGRT
Sbjct:   12 NWKKIASFVPGRSEVQCLHRWQKVLNPELVK----GSWTEEEDRKVRELVKLYGP-------------------KKWSLIASQLPGRIGKQCRERWTNHLDPGIRKGNWEPWEDELITKLQGEMGNKWARIAQHLPGRT 127

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BLAST of jgi.p|Trimin1|354039 vs. uniprot
Match: D8LSJ8_ECTSI (Myb-like DNA-binding protein, putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSJ8_ECTSI)

HSP 1 Score: 59.7 bits (143), Expect = 3.740e-5
Identity = 51/156 (32.69%), Postives = 71/156 (45.51%), Query Frame = 1

Query:  769 WTLEEDQRLL-AAVRMEWRDNTDWHSVALVVGTRSKVQCRDRWHNALGPALAAFQQAGVWADGDAQYRLGAPGSAQLPQQPAQAGSAATFSHSSSVFGALNIGDTNQQGAQRREQELP--VDNGHFHPAEDQLILRLQGQMGNCWGVIASQLPGRT 1227
            W+ EED+RL  A VR        W  +A +V TR+ VQC  RW   L P L      G W+  +    +G      + +     G  A+F            G T++Q  +R    L   V  G +   ED+LI+ LQG++GN W  IA +L GRT
Sbjct:  103 WSAEEDRRLRDAVVRFS---EARWKDIASLVETRNHVQCLQRWKKVLKPGLVK----GQWSAEEDDRLVGL-----VEKGFRNWGQVASFMD----------GRTSKQCRERWCHHLDPAVRKGGYTTEEDELIIFLQGEVGNRWADIAKRLTGRT 236

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|354039 vs. uniprot

BLAST of jgi.p|Trimin1|354039 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 4


Match Name	E-value	Identity	Description
A0A835Z1Q7_9STRA	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A2R5GJM5_9STRA	7.850e-7	31.61	Transcription factor MYB3R-4 n=1 Tax=Hondaea ferme...	[more]
A0A6B2LNX0_9EUKA	3.330e-5	30.22	Uncharacterized protein (Fragment) n=1 Tax=Arcella...	[more]
D8LSJ8_ECTSI	3.740e-5	32.69	Myb-like DNA-binding protein, putative n=2 Tax=Ect...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_204	contig	Contig_204:159934..170018 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|354039\|estExt_Genemark1.C_Ctg_2040024
Description	RNA polymerase II transcription regulator recruiting activity
COG category	ADK
Max annot lvl	2880.D7FQG8\|-
EggNOG OGs	COG5147@1\|root,KOG0048@2759\|Eukaryota
Evalue	2.9e-09
Seed ortholog	2880.D7FQG8
Hectar predicted targeting category	other localisation
TranscriptId	354361
Track	FilteredModels1
ProteinId	354039

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|354039	gene_17301	Tribonema minus UTEX_B_3156	gene	Contig_204 159934..170018 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|354039	Trimin1\|354039\|estExt_Genemark1.C_Ctg_2040024	Tribonema minus UTEX_B_3156	polypeptide	Contig_204 160099..170018 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_17301_11	exon_17301_11	Tribonema minus UTEX_B_3156	exon	Contig_204 159934..160166 -
exon_17301_10	exon_17301_10	Tribonema minus UTEX_B_3156	exon	Contig_204 160304..160598 -
exon_17301_9	exon_17301_9	Tribonema minus UTEX_B_3156	exon	Contig_204 161129..161734 -
exon_17301_8	exon_17301_8	Tribonema minus UTEX_B_3156	exon	Contig_204 161860..162159 -
exon_17301_7	exon_17301_7	Tribonema minus UTEX_B_3156	exon	Contig_204 162307..162467 -
exon_17301_6	exon_17301_6	Tribonema minus UTEX_B_3156	exon	Contig_204 162775..163630 -
exon_17301_5	exon_17301_5	Tribonema minus UTEX_B_3156	exon	Contig_204 164055..164202 -
exon_17301_4	exon_17301_4	Tribonema minus UTEX_B_3156	exon	Contig_204 164614..164687 -
exon_17301_3	exon_17301_3	Tribonema minus UTEX_B_3156	exon	Contig_204 166955..167080 -
exon_17301_2	exon_17301_2	Tribonema minus UTEX_B_3156	exon	Contig_204 167990..168693 -
exon_17301_1	exon_17301_1	Tribonema minus UTEX_B_3156	exon	Contig_204 169844..170018 -

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_17301	UTR3_17301	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_204 159934..160098 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_17301	CDS_17301	Tribonema minus UTEX_B_3156	CDS	Contig_204 169844..170018 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_204:159934..170018-
coding sequence from alignment at Contig_204:159934..170018-

spliced messenger RNA

>mRNA_17301 ID=mRNA_17301|Name=jgi.p|Trimin1|354039|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3678bp|location=Sequence derived from alignment at Contig_204:159934..170018- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGATTATCGCTGTGCCGCACGGCGCGCCGGCCAGCCCCATAGCATCAAG
AGGGTCGCCGCCGCCGCTGTCGCGCGTCACAGTGCTCAACTCTATGGACA
CCACCGCCTCTTCATTGGGCTTCGGCTTCGGTTCTAGTGCACTGTCAGCA
CAGCGCGGCGGCGGCCGCCACGAAGGCGCTGCAAGTCCTGCTGCCGCGCT
CGCGATGCCGAGTGGCGCAGCGCGCGCTGCCGCTGCGGCGCAGCAGCGGC
AGCAGCGGCTGCCGCCGCGCCCTTCACCATCGCAGCAGCAGTCGCAAGGC
GCCCCTCTTGCTGCTGCAGCAGCAAGCTCAGACCTGGCGCACATGCGGGC
CGCTTCTGTTCCGACAAGTTGCGGCTCGCAGCGCAGCGGCGGCGGCGGCA
GCGGCGCCGGCAGCGGCAGCAGCGGCAGCGGCAGCGGTGGCAGCGCATTT
GACTGGCACCGCCCCGGCAGCGCTCAGCGCAGCAGCGGTCATCACCACAA
CGTGGGCAGAGGTGCTGGCAATGTGAATCGCGAAGATGCGGAAGGGGCCT
TTGCGGATGGCGGAAGTGGCAGCGGCGGTGGCGGCGGAAGCGGCGCTGGC
AGCGGTGGCGGTGGCGACGACGGCGGCGGCGGCGGCGGCGGCGGCGGCGG
CGGCGGTGGCGGCGGCGGCGGCGGCAGTGGTGCTGACGACAGTGGCAGCG
GCAGCAGCGCAGGTGGCGGCGATCGCAGCCGGCACGGCAGCGGCAGTCGC
AGCGTGCGGCATGAGTCATGGACGTTGGAAGAGGACCAGAGGCTGCTAGC
GGCAGTGCGCATGGAATGGCGCGATAACACGGACTGGCATAGCGTTGCGC
TGGTGGTCGGTACCCGCAGCAAGGTTCAGTGTCGCGACCGGTGGCACAAC
GCACTCGGCCCCGCCCTTGCCGCGTTTCAACAGGCGGGCGTGTGGGCAGA
CGGTGATGCTCAATACCGGTTGGGCGCCCCTGGATCCGCACAGTTGCCGC
AGCAGCCGGCGCAGGCGGGCAGCGCAGCAACGTTCAGCCACAGCTCGTCC
GTGTTTGGAGCGCTGAATATAGGCGACACCAACCAGCAAGGCGCACAGCG
GCGCGAGCAAGAGCTGCCAGTTGACAACGGTCACTTCCACCCTGCTGAGG
ACCAACTTATCCTGAGGCTGCAGGGGCAGATGGGCAACTGCTGGGGTGTC
ATCGCGTCGCAACTTCCTGGCCGCACGCTCATGCGCGCCGCGCTGCGCAC
GCGCTCCGTCGGCAGCGCCAGCCCCGCGCGACAGTCGTCCTGGCCCAGCG
TCACGTCTACGTCCATGTTCGCGCCTGGCGCGCCATCGCCCGCCGCCGCT
GCCGCCGCCGCCGCCGCCGCGCAGCACTTCCAGGAGGCTTTTGCCCCAGC
GAGCGGTGCAGCCAGCATCGGCGGTGGCGGCGGTCACGGCGGCGGCGCCG
GTGCTGGTGGCAGCGGCAGTGGCAGCGCACCACGGCGCCAGCCTCAAAGC
GGCGGCGCCGCCGACCGTCGGAACAGTTTTACCTCAGCTGCTGCTGCCAT
CGGATGGCTCGGTGTGTCTCCTTTGTCCGCGACGCGGCAGCCGCGAGCGC
ACGCGCGCGTGGACTCCGGCAGCGGCGGCGCGGACCGCAGCGCCGTGCCT
GCCGCAGCGGCAGCAGCGGCTGCGGAAGACGGCACGGGAGCGGGCTCCAG
GTTCGACGAGTTCTGGAGGCAGTTTGCGGAGCTGACGAGTGACTCGGGCG
GCGGTCTGAGCGGCGGCAGCGGCAGCAGCGGCGGCAGCGGCGGCGGCGGC
AGCGCGAGCAGCGGCGCGTCCTTCAGCGCAGCGTCGCAGCGCTCGGACCG
GCCTGCCACCGCGAGCCCGCGCGACACGCGCCGCGCCGCCGGCGCCGCCA
CCGCCGCCGCCGCCGTCGCTGCTGCGTCGCGACGCGCTGGCGCTAGCGCT
GACACGCCTCCGGCACTCGGCGGCGCCGATGTGGTGGCGGCAGCGCAGGG
CGCCGCAGCGGCGCTGCTGCTGCAGAGCAGGCTGGACAGGGCTGTGCTGC
TGCGCGAAGCGACGATCGGCGCGGGTCGCGCAGCTGAGCATCAGCGGCCG
CACGCGCACGCGCCGCTGCAGCCGCCGCCGGCGCGCTCCGTGCGGCAGCG
CCGCGGCAGCCGCGGCTCCGCTGTCAATCAAACGCTCACGGCCAGCGAGC
GGCAGCAGCAGCAGAGCAGCCCGCGACGCGGCAGCGGCAGCCTTCAGCGG
TCGCGCCGGCAGCACCGACAGCAGCGTTGGTGGGGGGTGGCGAGGGGGGA
TTTGGGGCGCAAGAGGCGCGCCAGAGGCGGCCTCAGAGGCAGCACTGGCG
ATGTCGGCAGCAGCGGCAGCGCCGCGGCGCACACTCCAGCGCAGCAGGCC
GCCGCCACTGCTGGCGCCGCCGACACTGAGGCGGACATCAAGGCGGCGCT
GCACGAGTGGGCGGAGGCGCTCGAGAGCGATGCCGCCGCCGCCGCCGTCA
CTGGAGCGTCGGGCACTGATGCCACGCTGCGGACGGGCGTGCAGTTTTCA
AACGCCGCTCACGTTGAAGCGCCCCTGCCGTCGCGCGGCTTCATGTGGCC
AGCGTCCGCCGGCGTGCAGCCGCCGCCGCAGCAGCAGCAGCAGCGCCAGC
AGAAGTTCAACTTCAACCGCCGCCACTCCGCGGGCATGCTGGACGAGGGC
AACCGCGGCGCGTCGACTCTGTCTATGGCATCGTTCAGCGCTGCGGCCGC
TGCAGAGCCTCGCGCCGGTTCCGTGCCCGCTGCGTACCCGCAGTGGGCCT
TCGGGCCGGCGCCGCCGCTGGTGCCGCGACCACCACTGGCGCCGACGATG
GGAGCGGCGGCAGCGGGAGCGCGGATGCTGCCGCACGCAAACACGGCCTT
TTCTGCCGGTGCAGCTGCGTGGCGACCGCATGACACGCAGGCAGGCGCGC
CAGCGGCAGCGGCGGCGACAGCAGCTGCTGCAGGAGCTGCAGCAGCAGCA
CTGCAGGTGCCCGTGCGTGAGGGCTCGGGCTTCCGCGCTGGCACCGTTGC
GTGGACACCTGATGGACGCATGGCTGCGCGGCCTGCGGTGCCTGGCGCGG
CGGCGGCGGCGGCGGCGGCGGCGGCGGCGGTGGCGGCGGCGGCTGCCGCG
GCGGCGGACGATGCGCAGCGCATGCTGCAGGGGCAGGTGCGGCGGTGGCA
GCAGCGCGCGGCGCAGCGCAGCCAGGACGGACTGCCCGCAGCGGCAGCAG
CAGCGGCGCGCAACAACGCGTGGGACGCCCAAGTGTTCCTTGGCGAAATA
GCCCGTGATCTCGACTTTGCGCGCTACCAGCATAGTGGTGGCAGTAGAGA
CGGCAGCGGCGACGGCGGCGGCAGCGGCGGCGGCCGTGGAGGCGGCGGTG
GCGGCGGCGGCGGCGGCGGCGGCGGCAGCAGCGGCAGTGGCGGCGGGCAG
CGTGGAGCGCCGCTGCAGCACACGCGCAGCTGCGCGAACGAGGTTCGCGT
GACTGCTATGTGACGCGCCGACGTCTTCTTGCTTGGCCACCTGAGTAATT
CTACTTGAGGCCGCCCCTGCCTGCGCATATGGTGCCTCAGAAGTGCACTG
GGCGTGCGCTTCAGACATCGAGATTGTACCTTGTTACCGCGCCCTCCAAG
CGTGTGCATGTACAATTGTGCCTAGTCA

protein sequence of jgi.p|Trimin1|354039

>Trimin1|354039|estExt_Genemark1.C_Ctg_2040024 ID=Trimin1|354039|estExt_Genemark1.C_Ctg_2040024|Name=jgi.p|Trimin1|354039|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1171bp
MIIAVPHGAPASPIASRGSPPPLSRVTVLNSMDTTASSLGFGFGSSALSA
QRGGGRHEGAASPAAALAMPSGAARAAAAAQQRQQRLPPRPSPSQQQSQG
APLAAAAASSDLAHMRAASVPTSCGSQRSGGGGSGAGSGSSGSGSGGSAF
DWHRPGSAQRSSGHHHNVGRGAGNVNREDAEGAFADGGSGSGGGGGSGAG
SGGGGDDGGGGGGGGGGGGGGGGGGSGADDSGSGSSAGGGDRSRHGSGSR
SVRHESWTLEEDQRLLAAVRMEWRDNTDWHSVALVVGTRSKVQCRDRWHN
ALGPALAAFQQAGVWADGDAQYRLGAPGSAQLPQQPAQAGSAATFSHSSS
VFGALNIGDTNQQGAQRREQELPVDNGHFHPAEDQLILRLQGQMGNCWGV
IASQLPGRTLMRAALRTRSVGSASPARQSSWPSVTSTSMFAPGAPSPAAA
AAAAAAAQHFQEAFAPASGAASIGGGGGHGGGAGAGGSGSGSAPRRQPQS
GGAADRRNSFTSAAAAIGWLGVSPLSATRQPRAHARVDSGSGGADRSAVP
AAAAAAAAEDGTGAGSRFDEFWRQFAELTSDSGGGLSGGSGSSGGSGGGG
SASSGASFSAASQRSDRPATASPRDTRRAAGAATAAAAVAAASRRAGASA
DTPPALGGADVVAAAQGAAAALLLQSRLDRAVLLREATIGAGRAAEHQRP
HAHAPLQPPPARSVRQRRGSRGSAVNQTLTASERQQQQSSPRRGSGSLQR
SRRQHRQQRWWGVARGDLGRKRRARGGLRGSTGDVGSSGSAAAHTPAQQA
AATAGAADTEADIKAALHEWAEALESDAAAAAVTGASGTDATLRTGVQFS
NAAHVEAPLPSRGFMWPASAGVQPPPQQQQQRQQKFNFNRRHSAGMLDEG
NRGASTLSMASFSAAAAAEPRAGSVPAAYPQWAFGPAPPLVPRPPLAPTM
GAAAAGARMLPHANTAFSAGAAAWRPHDTQAGAPAAAAATAAAAGAAAAA
LQVPVREGSGFRAGTVAWTPDGRMAARPAVPGAAAAAAAAAAAVAAAAAA
AADDAQRMLQGQVRRWQQRAAQRSQDGLPAAAAAAARNNAWDAQVFLGEI
ARDLDFARYQHSGGSRDGSGDGGGSGGGRGGGGGGGGGGGGGSSGSGGGQ
RGAPLQHTRSCANEVRVTAM*

mRNA from alignment at Contig_204:159934..170018-

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_17301 ID=mRNA_17301|Name=jgi.p|Trimin1|354039|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=10085bp|location=Sequence derived from alignment at Contig_204:159934..170018- (Tribonema minus UTEX_B_3156 )
ATGATTATCGCTGTGCCGCACGGCGCGCCGGCCAGCCCCATAGCATCAAG
AGGGTCGCCGCCGCCGCTGTCGCGCGTCACAGTGCTCAACTCTATGGACA
CCACCGCCTCTTCATTGGGCTTCGGCTTCGGTTCTAGTGCACTGTCAGCA
CAGCGCGGCGGCGGCCGCCACGAAGGTGACGCGCGCATGCAAATTCATGT
GCTCGCTCGCAGATTCACACGCAGATTCGTGCTGGAGTCGCCGTGAGTTG
AAGTAGGTGCCGTGCTATTGCGATTCTCTATGCGAGGTCTGCATGCGACT
ACATGATGCGCGTCCTCACGAATGACGTGTGATGCCGTGAGTTGATCAAC
CGTCCTGCGCGCGTGATGAGGTCACGTGGCGTTGGCCATCTTACAACGGC
GCCATATTGTACATACCAACTGCTACAATCTTATTACTTCTATGTTGGTT
TGGGAATTACAGTCAGGGCGACCATTCTAAGCCATTAAATTTACGATGGC
TTCATGCATGAACAGAAGAAAGCCCTTGACCTCACGTGCTGGCAGTTTGC
AAACGGACCCGTACAGGCACTGCAGTAGCATGTTTGCAAGACAATAGGCC
TGCTCGCGAAGGTGCACGCATGATGTCAATGCCGCAGGCTACTCACATAA
CTGCCAACATCAGCGAATGATTGTCAGGCTGTTCACCTTGTCATGTAGAA
GTACTGACGAGCAGAGGGGTCGTCCCCATGTACTTCGAAGAAGAGCTCTG
CCTGTTGTCAACGCCTCAAGTACTAACGCCAGCTTCATCAGATACTTCAA
AATTACTTACACCGTGACGCAATCTAAAATGCCCTGCAGTAGCCCAGCTG
CAGCCGCTGCAGCACATCAGTCCCCAAGTAAAAACTTAAGTGTTCGTCAA
TGTTTGCTGAGTAGCTTTGCATCCTGCCACACATCTGGGGGCTCTCTACA
GCACAGCATGCATGGAAGCAGTCGTGAACGAGTTCACGTGCTGTGTGCGC
CGTGCTCTACGCTTCATTGCGTGCGCTTCGCATCCATCACAATAGGGTGC
GCTCTACATACTCCTCTGAGCTTTCAGATGCGCCATGGCAGAGGTGCCAC
TCATGCGGTTACAAGCTCTGCGTGCTGCTGGTTGTGCCGCGTGCAATTGG
TATACTATAGTGCTGCTGCTGCCGCTATCGTCGGCGCCGCCGCTGTTGCT
GCTTCGTGCCTGTGCCTGAGCACTGTGATGCGCACGTACGTGTCACACTC
CAACGCCAGGGTGTGGCGCTGACGGTCAGCTAGCCCCTAACACAATCCGT
GCTGCTGCGAAACTGCGGCGCGCAGGCGCTGCAAGTCCTGCTGCCGCGCT
CGCGATGCCGAGTGGCGCAGCGCGCGCTGCCGCTGCGGCGCAGCAGCGGC
AGCAGCGGCTGCCGCCGCGCCCTTCACCATCGCAGCAGCAGTCGCAAGGC
GCCCCTCTTGCTGCTGCAGCAGCAAGCTCAGACCTGGCGCACATGCGGGC
CGCTTCTGTTCCGACAAGTTGCGGCTCGCAGCGCAGCGGCGGCGGCGGCA
GCGGCGCCGGCAGCGGCAGCAGCGGCAGCGGCAGCGGTGGCAGCGCATTT
GACTGGCACCGCCCCGGCAGCGCTCAGCGCAGCAGCGGTCATCACCACAA
CGTGGGCAGAGGTGCTGGCAATGTGAATCGCGAAGATGCGGAAGGGGCCT
TTGCGGATGGCGGAAGTGGCAGCGGCGGTGGCGGCGGAAGCGGCGCTGGC
AGCGGTGGCGGTGGCGACGACGGCGGCGGCGGCGGCGGCGGCGGCGGCGG
CGGCGGTGGCGGCGGCGGCGGCGGCAGTGGTGCTGACGACAGTGGCAGCG
GCAGCAGCGCAGGTGGCGGCGATCGCAGCCGGCACGGCAGCGGCAGTCGC
AGCGTGCGGCATGAGTCATGGACGTTGGAAGAGGACCAGAGGCTGCTAGC
GGCAGTGCGCATGGAATGGCGCGATAACACGGACTGGCATAGCGTTGCGC
TGGTGGTCGGTACCCGCAGCAAGGTTCAGGTAAGCGAGCGCTAACATGTT
GTGTTACAACGTAGAGAGCTGCTGCGCACTGCCCTGTTGCTCCATACCGG
CAGAGGTAGACATCAAGGTGACCAATGCAGCGGAAGACCGACGCCAGTCG
TGTGCTGCTAGAAGTGAATGTATTGTAGTCTGTCTACCATCAAGTGTAAG
TGCCGTAACCGTCAAGCGTGCAAACAGCAATGAGCATGCAACTGCCACAT
GCTCCAACATGATGTTTACGTGGCAAAGGGGGACAGGGCACCCGTGTCAA
ACTTCAACAACCACACAAAACATGGTAATGGTTGTAGCTAACACGTAGTG
AGCAGTCTGGAGCCCTAGCTGATGTCTGACGTCTGTGTGTTGGCTTGATC
ACTCTGCGCACCTATTTGCTCTGGCTATTTGGTCCAACCACTCTCGCACT
GAAGTTGAAGTTGATATATACGTTCAGTGCCACATGGCAGTGAGAGGCCC
CGCAGTGACTACTCGATTCATTTCGTGTGCTCTACGGTTTGAAGAGCTGC
CGGAGCTGCTGGTTGCAAGCATCTGAGGCTAACTCTAACCCTAGGTGCAC
CAGTCGCTGAACTGCGGATTGTGCATGTACAGCAGCTGTACGCGGACACG
CCAATCACCTGACAGGGCTGCAGATGATGAAACGTTGAGGCGACGAAGCG
GCCGGTCACAGCGCTCAGCACGGAACTTGACCCAGCAGCCCGCTCCTTGT
GCAGGCATACCACGGCGGGCTCATCATCTACCCCCCCTCTCACTATATAC
GCATGGCAACGCCCCCAGAGCTCCCCCATGAATGGCCCCTTGTGATGATG
CTCACACCACTGGAAGAAAGCCCCCCCTCCCCCCCGTACAAGCTCACATT
GCTGCTCCGTTGCCGCACGATGCCCTACGCGCTCGCAGTGTCGCGACCGG
TGGCACAACGCACTCGGCCCCGCCCTTGCCGCGTTTCAACAGGCGGGCGT
GTGGGCAGACGGTGATGCTCAATACCGGTTGGGCGCCCCTGGATCCGCAC
AGTTGCCGCAGCAGGTGAGCTCGAATCCGGACCAACAACAACAGCAAGTG
ACTTTAGGTGTCGGCTTGTGAGGCCTGCAGTCGTGCAGATTGAGGGAATG
GTAGCATAGGGGTAGGCAGAGATGCCCCGTACTGCCATCATCGCACCAGT
CGCGCGTAGCGCGAGAAAAAACCTACCCGGTACCGGTACCAGTAGTGAAT
AACTGGTACCAGCAGCAATCCGTGCCAGTTTAACTGGTGCGCTGCGACAA
CCGGTACCAGTATACTGATGAAACCGGTAAAAACTGGTCTGACCGGTTTT
CACCTGTGGTACCAGTTTTTTACTAGTAATGCCAGGGCTTTTCTCATATG
CATAGCATACGTAGTATACCGTGCGATCAGTACATACAACTACAAAGGCT
TCAGGAACTTCGATTGGATAATGCTTCTGAGGAGTTAGAGGATTCCAGAT
TATGCAGCCGAATAGACCCAAGTGCATAGTGCGCAGCTCAAAGCCTTACC
CACAGCATCCTAGCGCAGTATTTGCTCCTGTAAGTGACACTCAAAGTGCA
CCCATCACGATGCAAAGGCAGTCAGCAACATGTGTGCAGCATGCAGCCAG
CAAAAGTATGGGCAGCATGCTCATATATCACACTGCCTGCTGCCACCTGT
TTCGACTTTCGCTCTGCAATTGGCACCCTTGCACTTGTGGATCAGCAAAC
AACCTTTGTCATATGTGTAAACCAGGTTTTCATGTTTTCATGTTTACGCA
GCTGAAGCTTGAGCCTTTCGTTGGCGACAGCGACAGCGACAGCGCATCGG
AGCGGAAACAATCCGATCCGGAGTTGCGTTCCTCAAAATGAATGCATCGC
GTCCCACGTCGGTTGATGGATGCTTATGCTTTGCATCCAACCTGCTATCT
CAGCCTGCAGAAGCTGCTTGTGCATTCAGCGACATCAAACAGTCGCGCAT
CCATCAATCGGAGACTGCCACCTGTGTTCAGTTTTTGCGCCACATGCCAT
CACTAGCCGGACCAATATGTCAACAGCAGCATCAGTAGGTCGACTCACAA
CCATATCTGCCAGTATACACCGTCCATTACACTTGTCGAGTCGTGTCGCT
CCCGCGCTGAACTAACTTCAAGGCACGAAAAGAATAAACGCTGAAACGGT
CTACTTGCATTTTAACTGGTGGCGCGGTCATCAGCTACGGCATCGGTACG
TGTTTACGGGTTGCCTCACGCGGCCAATTACCCGTACCGGTTAGCGAGCG
GCAACCAGTTACCGGTCAAAACTGGTACAAAAACTGGTACGGGTACCGGT
GCTACCAGTTAACGGGGCATCTCTGGGGGTAGGGTTAGGTTAGGGTTAGG
TTTAGGAAAACCCTAGCCCTAACCCTAAGATGTGACGGCTGGTGAGCGCA
TGGGCAATATGTCGTCTGCGTCGGCCTTAAAGTGCAGGCCAGCCTGCTGC
AACGCCATGCGGACCTGGCCATGGACAAATGTCACAAGTTCAAGTTGAAG
TAGCAGCATCAATCTGCCTGTTGAAAGTCTCTGACACGGGGTCAGTGGCG
AATAGCGCAATGGTGAAGATGGCTGGCCCGCAAGTCACCGATGTAGATGT
GAAGTACGTCATCGCGCACACTTCATGGCCAGGTATGTACACGTGCGCAC
GTACATATCGCAGTGCATGCATGCATATGTACATCCATACTGCAATTGTA
CATACTCCATGAATACACACGCGCATGGACAATACAATGGCAGCTCATAA
CGTCAAGAGACCCTAGCCCTAATTCCGGGGCAAACGGGGGCGGTTCCGCG
AGTGCGTGCGCGTTCCTTTTGAACCAAATGCTATTGAATTCACGCCAAAG
GAATCAACTCATCGCAGCTGAGGAGTTAGCTATAAATTTCTTTTAGAATG
CAGTGCGAGCACAACAACATTGCAGTAAAGCGTGTTCTCAGCTTACCTGA
GACCGCAAACGCAGGCCGTTGCGATACCCATGCAGATCACTTTAGTGTGC
TCCGTCGCCGAGCCATGCCTACCCTAAAGTGCACCTGTACACGTCGTAGC
ACTGGATGAGCGTCACCACCTGGCACCGTGCCTCAACCCCCCCCCCCCCC
CCCCCCCCGTGACACGTGGCTTGACAGAGGAGGGTACCGACGCACGTCAC
TTATTGCTCTGCCAATCCACAAACCACGACGTCAGTTTTTGTTGATGTGG
ACTTATGCCGCGTAATGACGCGAGCCTGAGACTTGTCGCACGCGTTTCAA
CGTTTGGTGCGACTGCTGTGCATCTGCGCAGCCGGCGCAGGCGGGCAGCG
CAGCAACGTTCAGCCACAGCTCGTCCGTGTTTGGAGCGCTGAATATAGGC
GACACGTGAGTACTGCTGCGCGCGAGCGCCATGCGATGATAGCCCTGCAT
GCATGCAGCATTGAGTGCGGCACGTTCAAACGGGGGTTGCGCGCACCGCT
GTGTCAATGCTCAGGCATCCACGGCGCTGTCTGTGCGAATAGTGGTGGGG
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTCACACTGTG
ATCAGCATTGAAGTTGGGCCAGCCACAGCGAAAAAGTTGTGCTCTGTCAT
GCGTGCCACCATGTGGTCTGTATTGCAACTGCCCCCTGAGTGCTGTGATC
TCGTACACACAAGCGCAATCGTCAAGTTCCTCTGCAGTTCAGGTTGAAGC
GTATGCTGGAGGTCACTCTCGCCCGAACTCTGACCCTGCGCTGCATGGAT
TGCATGCATTGCTCAGCAACCAGCAAGGCGCACAGCGGCGCGAGCAAGAG
CTGCCAGTTGACAACGGTCACTTCCACCCTGCTGAGGACCAACTTATCCT
GAGGCTGCAGGGGCAGATGGGCAACTGCTGGGGTGTCATCGCGTCGCAAC
TTCCTGGCCGCACGGTACGTATGTATACAAGGCTCAAGCACATGCATATA
TGTACTTTGACGTGTGCAGAGGTACTACAGAGTGTTGTGATGTAGACATT
TGTCCAAGTATGTCAAAGCATGTACATACTCTCAAAGAGCATGTTTAGCG
TACACTTTGAACTGGAAGCCGTGTGCGCGCACATGGGCACTGGCCGGCCT
GCATTGCAGCACGTGATGCGACATGTATCAGGGGAAACATCGGCGCTGGA
AAACAGCGCGCCCTAGAGCGCAGCCGCAAGCTGGCCGCATTGCGGCGCTA
GCAGCACGGTTCTTCAGACGCCTAATAAACACCAGGGTGTTCACCTTGCT
CCTCATTGCCCCCCCCCCACACCACCGCTCGCCCCGGCGCGCCGCCGTCC
CGCTGCAATAACGAGCCATCAAGTCGCGGTGGCTCCAGCTCATGCGCGCC
GCGCTGCGCACGCGCTCCGTCGGCAGCGCCAGCCCCGCGCGACAGTCGTC
CTGGCCCAGCGTCACGTCTACGTCCATGTTCGCGCCTGGCGCGCCATCGC
CCGCCGCCGCTGCCGCCGCCGCCGCCGCCGCGCAGCACTTCCAGGAGGCT
TTTGCCCCAGCGAGCGGTGCAGCCAGCATCGGCGGTGGCGGCGGTCACGG
CGGCGGCGCCGGTGCTGGTGGCAGCGGCAGTGGCAGCGCACCACGGCGCC
AGCCTCAAAGCGGCGGCGCCGCCGACCGTCGGAACAGTTTTACCTCAGCT
GCTGCTGCCATCGGATGGCTCGGTGTGTCTCCTTTGTCCGCGACGCGGCA
GCCGCGAGCGCACGCGCGCGTGGACTCCGGCAGCGGCGGCGCGGACCGCA
GCGCCGTGCCTGCCGCAGCGGCAGCAGCGGCTGCGGAAGACGGCACGGGA
GCGGGCTCCAGGTTCGACGAGTTCTGGAGGCAGTTTGCGGAGCTGACGAG
TGACTCGGGCGGCGGTCTGAGCGGCGGCAGCGGCAGCAGCGGCGGCAGCG
GCGGCGGCGGCAGCGCGAGCAGCGGCGCGTCCTTCAGCGCAGCGTCGCAG
CGCTCGGACCGGCCTGCCACCGCGAGCCCGCGCGACACGCGCCGCGCCGC
CGGCGCCGCCACCGCCGCCGCCGCCGTCGCTGCTGCGTCGCGACGCGCTG
GCGCTAGCGCTGACACGCCTCCGGCACTCGGCGGCGCCGATGTGGTGGCG
GCAGCGCAGGGCGCCGCAGCGGCGCTGCTGCTGCAGAGCAGGCTGGACAG
GGCTGTGCTGCTGCGCGAAGCGACGATCGGCGCGGGTCGCGCAGGTGGGT
TCTCAAGTGCTGTCTGCGTTTTCAAATTCTGAGCGGCAGCGAAGGCACAT
CTGACACAGTGCCTCACCAACCGTGGCACGATCAGCAGCTTGTCAGCGCT
GCAGCACGATGACAGGAGCACAGGCAAATGGTGGCGTGAAAGGAACTTGT
TTTTCAAAGCGGCCGCTTGTGCTAAGCACCTCTCTGGTCAAGGCATTCTG
TACGCAGCTGACGGCGTCCTCGCAGAACACACTGCCGCTCTGCCTGCCGC
TCATTGCTGATCTCGGCGCCTCGTAACCGCTTGCCCGCAACCGCCGCGCA
GCTGAGCATCAGCGGCCGCACGCGCACGCGCCGCTGCAGCCGCCGCCGGC
GCGCTCCGTGCGGCAGCGCCGCGGCAGCCGCGGCTCCGCTGTCAATCAAA
CGCTCACGGCCAGCGAGCGGCAGCAGCAGCAGAGCAGCCCGCGACGCGGC
AGCGGCAGCCTTGTCGGCGCCGGCATCGACGGCAGGATTTCGGGACAAGG
CGATGCTGCACATGCAAGCATTGGCGGCAGCAGCGGCGCCGCCGCCGCGC
CTTTCTCCGATGACTGAGCAGCTGACCGCATTGCAGCAGCGCCGCTTCGG
CGGCGGCAGCAGCGGTCGCGCCGGCAGCACCGACAGCAGCGTTGGTGGGG
GGTGGCGAGGGGGGATTTGGGGCGCAAGAGGCGCGCCAGAGGCGGCCTCA
GAGGCAGCACTGGCGATGTCGGCAGCAGCGGCAGCGCCGCGGCGCACACT
CCAGCGCAGCAGGCCGCCGCCACTGCTGGCGCCGCCGACACTGAGGCGGA
CATCAAGGCGGCGCTGCACGAGTGGGCGGAGGCGCTCGAGAGCGATGCCG
CCGCCGCCGCCGTCACTGGAGCGTCGGGCACTGATGCCACGCTGCGGACG
GGCGTGCAGGTGCAGCAGCAGCAGCTCCTGCAGCAGTAGGCACGGCGCCA
GCTGCAGCTGCTGCTGCAGCGGCAGCAGCGCGCGCAGCAGATGCCGCCTC
AAGAGCTGCCGCCATTCGTGCAGCGCTCCGCGAGTTTTCAAACGCCGCTC
ACGTTGAAGCGCCCCTGCCGTCGCGCGGCTTCATGTGGCCAGCGTCCGCC
GGCGTGCAGCCGCCGCCGCAGCAGCAGCAGCAGCGCCAGCAGAAGTTCAA
CTTCAACCGCCGCCACTCCGCGGGCATGCTGGACGAGGGCAACCGCGGCG
CGTCGACTCTGTCTATGGCATCGTTCAGCGCTGCGGCCGCTGCAGAGCCT
CGCGCCGGTTCCGTGCCCGCTGCGTACCCGCAGTGGGCCTTCGGGCCGGC
GCCGCCGCTGGTGCCGCGACCACCACTGGCGCCGACGATGGGAGCGGCGG
CAGCGGGAGCGCGGATGCTGCCGCACGCAAACACGGCCTTTTCTGCCGGT
GCAGCTGCGTGGCGACCGCATGACACGCAGGCAGGCGCGCCAGCGGCAGC
GGCGGCGACAGCAGCTGCTGCAGGAGCTGCAGCAGCAGCACTGCAGGTGC
CCGTGCGTGAGGGCTCGGGCTTCCGCGCTGGCACCGTTGCGTGGACACCT
GATGGACGCATGGCTGCGCGGCCTGCGGTGCCTGGCGCGGCGGCGGCGGC
GGCGGCGGCGGCGGCGGCGGTGGCGGCGGCGGCTGCCGCGGTGCCGCCGC
AGCTGTCCAACGCCCAACAAAGGCAGCGCACACAGGCAAGTTTCAAGATG
CGTCTGCATTGCGACAGTGCTCTGGCCTTGCTGGTCGGCCCCTGTTGCCA
GTAAGTTCTGTATGAACTCGCACAGCAGGTCGTAGGCGGTTAAAGCGGCG
CGTGTGAGTGTGGCTGACCGCATCAGCTGCGGACACCGCGGTAGGTACTG
AACACCGCACATGCAGTTTGCTTGTCTGTGCCATGCCACGCCACCCCTAA
GTAACATAGTACTTGTGTAAAGGAGATCATGCACACAGTGAAATGATGCA
CACAGTGAAGACGGGCAACCCTGTGCTTATGACTGGAGCACATGCTATGC
GATGCAGCGCTCATTGCGTCGAGCGCTAGTACCATTCGCCGATGACGACA
TGTTCCACAGGTGGCCCATTCTGCAATCAAAGTGCAGCGCAATGACTTGT
GACACAGCGCCCCAAGCGGCATCTCTGCTTGAAACCTCAAGACTGCCGAC
GCTCCTGTGGCCTTGCGCAGGCGGCGGACGATGCGCAGCGCATGCTGCAG
GGGCAGGTGCGGCGGTGGCAGCAGCGCGCGGCGCAGCGCAGCCAGGACGG
ACTGCCCGCAGCGGCAGCAGCAGCGGCGCGCAACAACGCGTGGGACGCCC
AAGTGTTCCTTGGCGAAATAGCCCGTGATCTCGACTTTGCGCGCTACCAG
CATAGTGGTGGCAGTAGAGACGGCAGCGGCGACGGCGGCGGCAGCGGCGG
CGGCCGTGGAGGCGGCGGTGGCGGCGGCGGCGGCGGCGGCGGCGGCAGCA
GCGGCAGTGGCGGCGGTAGCGGCAGTGCTAGCCCGTGAGGTGCTGGCAGT
GCATCTTCAAGACCACATGCGCGCCTGACATGCAAGGCCTTGGTCAGGTG
TAGACGATTGCGGAGGCGGCATAAGCCGGTCTCCCCACGCGTTGCCCACG
AGGGCAGCGTGGAGCGCCGCTGCAGCACACGCGCAGCTGCGCGAACGAGG
TTCGCGTGACTGCTATGTGACGCGCCGACGTCTTCTTGCTTGGCCACCTG
AGTAATTCTACTTGAGGCCGCCCCTGCCTGCGCATATGGTGCCTCAGAAG
TGCACTGGGCGTGCGCTTCAGACATCGAGATTGTACCTTGTTACCGCGCC
CTCCAAGCGTGTGCATGTACAATTGTGCCTAGTCA

Coding sequence (CDS) from alignment at Contig_204:159934..170018-

>mRNA_17301 ID=mRNA_17301|Name=jgi.p|Trimin1|354039|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=3513bp|location=Sequence derived from alignment at Contig_204:159934..170018- (Tribonema minus UTEX_B_3156 )
ATGATTATCGCTGTGCCGCACGGCGCGCCGGCCAGCCCCATAGCATCAAG
AGGGTCGCCGCCGCCGCTGTCGCGCGTCACAGTGCTCAACTCTATGGACA
CCACCGCCTCTTCATTGGGCTTCGGCTTCGGTTCTAGTGCACTGTCAGCA
CAGCGCGGCGGCGGCCGCCACGAAGGCGCTGCAAGTCCTGCTGCCGCGCT
CGCGATGCCGAGTGGCGCAGCGCGCGCTGCCGCTGCGGCGCAGCAGCGGC
AGCAGCGGCTGCCGCCGCGCCCTTCACCATCGCAGCAGCAGTCGCAAGGC
GCCCCTCTTGCTGCTGCAGCAGCAAGCTCAGACCTGGCGCACATGCGGGC
CGCTTCTGTTCCGACAAGTTGCGGCTCGCAGCGCAGCGGCGGCGGCGGCA
GCGGCGCCGGCAGCGGCAGCAGCGGCAGCGGCAGCGGTGGCAGCGCATTT
GACTGGCACCGCCCCGGCAGCGCTCAGCGCAGCAGCGGTCATCACCACAA
CGTGGGCAGAGGTGCTGGCAATGTGAATCGCGAAGATGCGGAAGGGGCCT
TTGCGGATGGCGGAAGTGGCAGCGGCGGTGGCGGCGGAAGCGGCGCTGGC
AGCGGTGGCGGTGGCGACGACGGCGGCGGCGGCGGCGGCGGCGGCGGCGG
CGGCGGTGGCGGCGGCGGCGGCGGCAGTGGTGCTGACGACAGTGGCAGCG
GCAGCAGCGCAGGTGGCGGCGATCGCAGCCGGCACGGCAGCGGCAGTCGC
AGCGTGCGGCATGAGTCATGGACGTTGGAAGAGGACCAGAGGCTGCTAGC
GGCAGTGCGCATGGAATGGCGCGATAACACGGACTGGCATAGCGTTGCGC
TGGTGGTCGGTACCCGCAGCAAGGTTCAGTGTCGCGACCGGTGGCACAAC
GCACTCGGCCCCGCCCTTGCCGCGTTTCAACAGGCGGGCGTGTGGGCAGA
CGGTGATGCTCAATACCGGTTGGGCGCCCCTGGATCCGCACAGTTGCCGC
AGCAGCCGGCGCAGGCGGGCAGCGCAGCAACGTTCAGCCACAGCTCGTCC
GTGTTTGGAGCGCTGAATATAGGCGACACCAACCAGCAAGGCGCACAGCG
GCGCGAGCAAGAGCTGCCAGTTGACAACGGTCACTTCCACCCTGCTGAGG
ACCAACTTATCCTGAGGCTGCAGGGGCAGATGGGCAACTGCTGGGGTGTC
ATCGCGTCGCAACTTCCTGGCCGCACGCTCATGCGCGCCGCGCTGCGCAC
GCGCTCCGTCGGCAGCGCCAGCCCCGCGCGACAGTCGTCCTGGCCCAGCG
TCACGTCTACGTCCATGTTCGCGCCTGGCGCGCCATCGCCCGCCGCCGCT
GCCGCCGCCGCCGCCGCCGCGCAGCACTTCCAGGAGGCTTTTGCCCCAGC
GAGCGGTGCAGCCAGCATCGGCGGTGGCGGCGGTCACGGCGGCGGCGCCG
GTGCTGGTGGCAGCGGCAGTGGCAGCGCACCACGGCGCCAGCCTCAAAGC
GGCGGCGCCGCCGACCGTCGGAACAGTTTTACCTCAGCTGCTGCTGCCAT
CGGATGGCTCGGTGTGTCTCCTTTGTCCGCGACGCGGCAGCCGCGAGCGC
ACGCGCGCGTGGACTCCGGCAGCGGCGGCGCGGACCGCAGCGCCGTGCCT
GCCGCAGCGGCAGCAGCGGCTGCGGAAGACGGCACGGGAGCGGGCTCCAG
GTTCGACGAGTTCTGGAGGCAGTTTGCGGAGCTGACGAGTGACTCGGGCG
GCGGTCTGAGCGGCGGCAGCGGCAGCAGCGGCGGCAGCGGCGGCGGCGGC
AGCGCGAGCAGCGGCGCGTCCTTCAGCGCAGCGTCGCAGCGCTCGGACCG
GCCTGCCACCGCGAGCCCGCGCGACACGCGCCGCGCCGCCGGCGCCGCCA
CCGCCGCCGCCGCCGTCGCTGCTGCGTCGCGACGCGCTGGCGCTAGCGCT
GACACGCCTCCGGCACTCGGCGGCGCCGATGTGGTGGCGGCAGCGCAGGG
CGCCGCAGCGGCGCTGCTGCTGCAGAGCAGGCTGGACAGGGCTGTGCTGC
TGCGCGAAGCGACGATCGGCGCGGGTCGCGCAGCTGAGCATCAGCGGCCG
CACGCGCACGCGCCGCTGCAGCCGCCGCCGGCGCGCTCCGTGCGGCAGCG
CCGCGGCAGCCGCGGCTCCGCTGTCAATCAAACGCTCACGGCCAGCGAGC
GGCAGCAGCAGCAGAGCAGCCCGCGACGCGGCAGCGGCAGCCTTCAGCGG
TCGCGCCGGCAGCACCGACAGCAGCGTTGGTGGGGGGTGGCGAGGGGGGA
TTTGGGGCGCAAGAGGCGCGCCAGAGGCGGCCTCAGAGGCAGCACTGGCG
ATGTCGGCAGCAGCGGCAGCGCCGCGGCGCACACTCCAGCGCAGCAGGCC
GCCGCCACTGCTGGCGCCGCCGACACTGAGGCGGACATCAAGGCGGCGCT
GCACGAGTGGGCGGAGGCGCTCGAGAGCGATGCCGCCGCCGCCGCCGTCA
CTGGAGCGTCGGGCACTGATGCCACGCTGCGGACGGGCGTGCAGTTTTCA
AACGCCGCTCACGTTGAAGCGCCCCTGCCGTCGCGCGGCTTCATGTGGCC
AGCGTCCGCCGGCGTGCAGCCGCCGCCGCAGCAGCAGCAGCAGCGCCAGC
AGAAGTTCAACTTCAACCGCCGCCACTCCGCGGGCATGCTGGACGAGGGC
AACCGCGGCGCGTCGACTCTGTCTATGGCATCGTTCAGCGCTGCGGCCGC
TGCAGAGCCTCGCGCCGGTTCCGTGCCCGCTGCGTACCCGCAGTGGGCCT
TCGGGCCGGCGCCGCCGCTGGTGCCGCGACCACCACTGGCGCCGACGATG
GGAGCGGCGGCAGCGGGAGCGCGGATGCTGCCGCACGCAAACACGGCCTT
TTCTGCCGGTGCAGCTGCGTGGCGACCGCATGACACGCAGGCAGGCGCGC
CAGCGGCAGCGGCGGCGACAGCAGCTGCTGCAGGAGCTGCAGCAGCAGCA
CTGCAGGTGCCCGTGCGTGAGGGCTCGGGCTTCCGCGCTGGCACCGTTGC
GTGGACACCTGATGGACGCATGGCTGCGCGGCCTGCGGTGCCTGGCGCGG
CGGCGGCGGCGGCGGCGGCGGCGGCGGCGGTGGCGGCGGCGGCTGCCGCG
GCGGCGGACGATGCGCAGCGCATGCTGCAGGGGCAGGTGCGGCGGTGGCA
GCAGCGCGCGGCGCAGCGCAGCCAGGACGGACTGCCCGCAGCGGCAGCAG
CAGCGGCGCGCAACAACGCGTGGGACGCCCAAGTGTTCCTTGGCGAAATA
GCCCGTGATCTCGACTTTGCGCGCTACCAGCATAGTGGTGGCAGTAGAGA
CGGCAGCGGCGACGGCGGCGGCAGCGGCGGCGGCCGTGGAGGCGGCGGTG
GCGGCGGCGGCGGCGGCGGCGGCGGCAGCAGCGGCAGTGGCGGCGGGCAG
CGTGGAGCGCCGCTGCAGCACACGCGCAGCTGCGCGAACGAGGTTCGCGT
GACTGCTATGTGA