Trimin1|354014|estExt_Genemark1.C_Ctg_2030010 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|354014
Unique NameTrimin1|354014|estExt_Genemark1.C_Ctg_2030010
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length301
Homology
BLAST of jgi.p|Trimin1|354014 vs. uniprot
Match: A0A835Z9D9_9STRA (HotDog domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9D9_9STRA)

HSP 1 Score: 597 bits (1539), Expect = 1.230e-215
Identity = 300/300 (100.00%), Postives = 300/300 (100.00%), Query Frame = 0
Query:    1 MRVSYVKVDGQGATEDEVPAFLREELTLTRHVRTGFDIDFPAIHANPAVHAALGYKGQYFSSGRMDIKRWWNERDRSIVGSVYFTKECEGPPGVTHGGAIATALDDVLGTQVWRYAGYHRRGMPTMSLTIRYIKKVPMETLLVVRASVTRVLGRRVHVMGGLYEPLTGEPYAEADGVFFLPRPVDPEDLLPYEEALRRFGRLAPAEDQVPEIRAYYAARRPSGMAKLALLLRTAFACVSAAAAGALLLRTVERTRMRAAPVTAHRIRRRVVTSGRHGGERRRCVRAWSLRGDGARQPWQR 300
            MRVSYVKVDGQGATEDEVPAFLREELTLTRHVRTGFDIDFPAIHANPAVHAALGYKGQYFSSGRMDIKRWWNERDRSIVGSVYFTKECEGPPGVTHGGAIATALDDVLGTQVWRYAGYHRRGMPTMSLTIRYIKKVPMETLLVVRASVTRVLGRRVHVMGGLYEPLTGEPYAEADGVFFLPRPVDPEDLLPYEEALRRFGRLAPAEDQVPEIRAYYAARRPSGMAKLALLLRTAFACVSAAAAGALLLRTVERTRMRAAPVTAHRIRRRVVTSGRHGGERRRCVRAWSLRGDGARQPWQR
Sbjct:    1 MRVSYVKVDGQGATEDEVPAFLREELTLTRHVRTGFDIDFPAIHANPAVHAALGYKGQYFSSGRMDIKRWWNERDRSIVGSVYFTKECEGPPGVTHGGAIATALDDVLGTQVWRYAGYHRRGMPTMSLTIRYIKKVPMETLLVVRASVTRVLGRRVHVMGGLYEPLTGEPYAEADGVFFLPRPVDPEDLLPYEEALRRFGRLAPAEDQVPEIRAYYAARRPSGMAKLALLLRTAFACVSAAAAGALLLRTVERTRMRAAPVTAHRIRRRVVTSGRHGGERRRCVRAWSLRGDGARQPWQR 300          
BLAST of jgi.p|Trimin1|354014 vs. uniprot
Match: D8LMS8_ECTSI (Thioesterase superfamily protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMS8_ECTSI)

HSP 1 Score: 164 bits (415), Expect = 9.420e-45
Identity = 89/193 (46.11%), Postives = 114/193 (59.07%), Query Frame = 0
Query:    1 MRVSYVKVDGQGATEDEVPAFLREELTLTRHVRTGFDIDFPAIHANPAVHAALGYKGQYFSSGRMDIKRWWNERDRSIVGSVYFTKECEGPPGVTHGGAIATALDDVLGTQVWRYAGYHRRGMPTMSLTIRYIKKVPMETLLVVRASVTRVLGRRVHVMGGLYEPLTGEPY-AEADGVFFL-PRPVDPEDLLP 191
            MRV+Y +       + ++P FLR E       RTGFDIDFPAI   PAV AA+GY G+ F    MDI+RW+N     + GSV F+  CEGPP   HGGA++TALDDVLGT  WR  G+ R G+PTM LT+R++   PME  L     V +  GR+V V   L +P  G    AE +G+F+L  RP  P+   P
Sbjct:   52 MRVAYRR--RHAGPDGQIPDFLRSEFKSGSWERTGFDIDFPAIAKEPAVAAAIGYTGRNFIGDAMDIRRWYNRDANVMAGSVVFSLGCEGPPDHVHGGAVSTALDDVLGTMAWREVGFPRWGLPTMRLTVRFLAGAPMERQLRFDTRVVKREGRKVFVEAALRDPTCGNKLLAEGEGLFYLRKRPASPQTQQP 242          
BLAST of jgi.p|Trimin1|354014 vs. uniprot
Match: M2Y0I1_GALSU (Thioesterase family n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y0I1_GALSU)

HSP 1 Score: 69.7 bits (169), Expect = 1.030e-10
Identity = 39/121 (32.23%), Postives = 65/121 (53.72%), Query Frame = 0
Query:   67 IKRWWNERDRSIVGSVYFTKECEGPPGVTHGGAIATALDDVLGTQVWRYAGYHRRGMPTMSLTIRYIKKVPMETLLVVRASVTRVLGRRVHVMGGLYEPLTGEPYAEADGVFFLPRPVDPE 187
            ++ +  + +  +   V   +  +GPPG  HGGAIAT LDD LG+ V+    +      T +L I Y K +P+ ++  V A   +  GR+++  G +Y+   G  +AEA G+F +PR +  E
Sbjct:   64 VRMFHKKEENKVTYVVRSGERVQGPPGYVHGGAIATLLDDCLGSAVFLSGSFAM----TANLNINYRKPIPLNSVRTVEAFFEKQEGRKLYAKGCIYDK-DGSVHAEATGLFVVPRHLSQE 179          
BLAST of jgi.p|Trimin1|354014 vs. uniprot
Match: UPI00127E7B15 (PaaI family thioesterase n=1 Tax=Desulfuromonas sp. AOP6 TaxID=1566351 RepID=UPI00127E7B15)

HSP 1 Score: 67.8 bits (164), Expect = 3.550e-10
Identity = 45/139 (32.37%), Postives = 70/139 (50.36%), Query Frame = 0
Query:   39 DFPAIHANPAVHAALGYKGQYFSSGRMDIKRWWNERDRSIVGSVYFTKECEGPPGVTHGGAIATALDDVLGTQVWRYAGYHRRGMPTMSLTIRYIKKVPMETLLVVRASVTRVLGRRVHVMGGLYEPLTGEPYAEADGV 177
            D+    A   V A+L +        R  + R++ +  R +   V+F  E EGPPG +HGGA+A   D+VLG   W  AGY    +   +L + +   +P+E ++ V + +  V GR+V V G L     G  YAEA+ +
Sbjct:   24 DWTPFDAPSLVGASLRFVSGEPDGNRYRV-RYYCDGQRRLQARVWFGPETEGPPGHSHGGAMAAVFDEVLGLAAWT-AGY---SVVVGNLNVSFRNMLPLEQVVTVESDIVSVQGRKVKVRGRLCRD--GTVYAEAEAL 155          
BLAST of jgi.p|Trimin1|354014 vs. uniprot
Match: A0A4Y9PCX4_9ACTN (PaaI family thioesterase n=2 Tax=Blastococcus sp. CT_GayMR19 TaxID=2559608 RepID=A0A4Y9PCX4_9ACTN)

HSP 1 Score: 68.6 bits (166), Expect = 8.650e-10
Identity = 50/120 (41.67%), Postives = 62/120 (51.67%), Query Frame = 0
Query:   75 DRSIVGSVYFTKECEGPPGVTHGGAIATALDDVLGTQVWRYAGYHRRGMPTMSLTIRYIKKVPMETLLVVRASVTRVLGRRVHVMGGLY---EPLTGEPYAEADGVFFLPRPVDPEDLLP 191
            D    G V   K  EGPPG+ HGG +AT LD VL   V R AG   RG  T +LT+ Y++ V +   L+V A V    GRR      L    +P  G   AEA+G+F   RP  P D+LP
Sbjct:  130 DGRATGHVTLGKPHEGPPGLVHGGVVATLLDHVLARAV-RAAG---RGGMTATLTVTYLRPVRLGVPLLVTAKVADADGRRTTARARLVARDDP--GSTLAEAEGLFVSLRPDVPADVLP 243          
BLAST of jgi.p|Trimin1|354014 vs. uniprot
Match: A0A2H0P9S1_9BACT (4HBT domain-containing protein n=1 Tax=Elusimicrobia bacterium CG11_big_fil_rev_8_21_14_0_20_64_6 TaxID=2014311 RepID=A0A2H0P9S1_9BACT)

HSP 1 Score: 65.5 bits (158), Expect = 2.400e-9
Identity = 48/152 (31.58%), Postives = 71/152 (46.71%), Query Frame = 0
Query:   39 DFPAIHANPAVHAALGYKGQYFSSGRMDIKRWWNERDRSIVGSVYFTKECEGPPGVTHGGAIATALDDVLGTQVWRYAGYHRRGMPTMSLTIRYIKKVPMETLLVVRASVTRVLGRRVHVMGGLYEPLTGEPYAEADGVFFLPRPVDPEDLL 190
            D+ A+   P   A   + G   +  R+ +K ++   D S+V +  F    EG PG+ HGGAI TALD+ LG   W  AG+    + T  LT  + K VP+   L+V   + R    R+ ++ G         YA ADG F +    D   +L
Sbjct:   13 DWEAVQPFPFATARGAFAGMTSTEDRIVLK-YYRRHDGSLVATARFGPCSEGAPGLVHGGAILTALDEALGAAAW-LAGHP---VMTARLTTEFRKGVPVGATLLVETRLIRER-HRIVILEGTLSDKDHHVYAYADGRFMILADSDQRHIL 158          
BLAST of jgi.p|Trimin1|354014 vs. uniprot
Match: A0A285V1S3_9ACTN (Uncharacterized domain 1-containing protein n=1 Tax=Blastococcus aggregatus TaxID=38502 RepID=A0A285V1S3_9ACTN)

HSP 1 Score: 65.5 bits (158), Expect = 6.500e-9
Identity = 47/116 (40.52%), Postives = 58/116 (50.00%), Query Frame = 0
Query:   75 DRSIVGSVYFTKECEGPPGVTHGGAIATALDDVLGTQVWRYAGYHRRGMPTMSLTIRYIKKVPMETLLVVRASVTRVLGRRVHVMGGLY-EPLTGEPYAEADGVFFLPRPVDPEDL 189
            D    G   F K  EGPPG+ HGG +AT LD VL   V R AG   RG  T +LT+ Y + VP+   +V  A +  V GRR      L  E   G   AEA+G+F   RP    D+
Sbjct:   94 DGRATGRATFGKAHEGPPGLVHGGVVATVLDHVLARAV-RAAG---RGGLTATLTVTYRRPVPLGVPVVATAEMGEVDGRRTTATARLVAEDDPGTTLAEAEGLFVALRPERAADV 205          
BLAST of jgi.p|Trimin1|354014 vs. uniprot
Match: UPI001909D43C (PaaI family thioesterase n=2 Tax=Blastococcus TaxID=38501 RepID=UPI001909D43C)

HSP 1 Score: 65.1 bits (157), Expect = 9.250e-9
Identity = 48/118 (40.68%), Postives = 61/118 (51.69%), Query Frame = 0
Query:   75 DRSIVGSVYFTKECEGPPGVTHGGAIATALDDVLGTQVWRYAGYHRRGMPTMSLTIRYIKKVPMETLLVVRASVTRVLGRRVHVMGGLY---EPLTGEPYAEADGVFFLPRPVDPEDL 189
            D   VG V F K  EGPPG+ HGG +AT LD VL   V R AG   RG  T +LT+ Y + VP+   +V +A +    GRR      L    +P T    AEA+G+F   RP    D+
Sbjct:   94 DGRSVGRVTFGKAHEGPPGLVHGGVVATVLDHVLARAV-RAAG---RGGLTATLTVTYRRPVPLGVPVVAKAEMGATEGRRTVATARLVAEDDPAT--TLAEAEGLFVALRPERAADV 205          
BLAST of jgi.p|Trimin1|354014 vs. uniprot
Match: A0A1E7IEX5_9DELT (Thioesterase n=2 Tax=Deltaproteobacteria TaxID=28221 RepID=A0A1E7IEX5_9DELT)

HSP 1 Score: 63.5 bits (153), Expect = 1.040e-8
Identity = 46/144 (31.94%), Postives = 72/144 (50.00%), Query Frame = 0
Query:   22 LREELTL-TRHVRTGFDIDFPAIHANPAVHAALGYKGQYFSSGRMDIKRW----WNERDRSIVGSVYFTKECEGPPGVTHGGAIATALDDVLGTQVWRYAGYHRRGMPTMSLTIRYIKKVPMETLLVVRASVTRVLGRRVHVMG 160
            +++ L + T +V    D D+    A   V A+L      F SG  D  R+    +   ++ +   ++F  E EGPPG +HGGA+A  LD+VLG   W  AGY    +   +L I +   +P+  ++ V +SV    GR+V V G
Sbjct:    1 MKDSLNIDTTNVDLSGDSDWTTFDAPALVGASLR-----FVSGEPDGDRYRVHYYKNSEQELRARIWFGPETEGPPGHSHGGAMAAVLDEVLGLAAWT-AGY---AIVVGNLNISFRNLLPLGAVVTVESSVVSAQGRKVMVHG 135          
BLAST of jgi.p|Trimin1|354014 vs. uniprot
Match: Q1K443_DESA6 (Thioesterase superfamily n=1 Tax=Desulfuromonas acetoxidans (strain DSM 684 / 11070) TaxID=281689 RepID=Q1K443_DESA6)

HSP 1 Score: 63.5 bits (153), Expect = 1.080e-8
Identity = 43/139 (30.94%), Postives = 70/139 (50.36%), Query Frame = 0
Query:   37 DIDFPAIHANPAVHAALGYKGQYFSSGRMDIKRWWNERDRSIVGSVYFTKECEGPPGVTHGGAIATALDDVLGTQVWRYAGYHRRGMPTMSLTIRYIKKVPMETLLVVRASVTRVLGRRVHVMGGLYEPLTGEPYAEAD 175
            D D+    A   V A+L +        R  + R++   +  +   ++F  E EGPPG +HGGA+A   D+VLG   W  AGY   G+   +L + +   +P+ T+  V ++V    GR++ V G L +  T   +AEA+
Sbjct:   17 DDDWTPFDAPSLVGASLRFVSGEPDGNRYRV-RYYRNAEGELRARIWFGPETEGPPGHSHGGAMAAVFDEVLGLAAWT-AGY---GIVVGNLNVSFRNMLPLGTVATVVSTVLSAEGRKIKVQGRLVQGET--VFAEAE 148          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|354014 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z9D9_9STRA1.230e-215100.00HotDog domain-containing protein n=1 Tax=Tribonema... [more]
D8LMS8_ECTSI9.420e-4546.11Thioesterase superfamily protein n=1 Tax=Ectocarpu... [more]
M2Y0I1_GALSU1.030e-1032.23Thioesterase family n=1 Tax=Galdieria sulphuraria ... [more]
UPI00127E7B153.550e-1032.37PaaI family thioesterase n=1 Tax=Desulfuromonas sp... [more]
A0A4Y9PCX4_9ACTN8.650e-1041.67PaaI family thioesterase n=2 Tax=Blastococcus sp. ... [more]
A0A2H0P9S1_9BACT2.400e-931.584HBT domain-containing protein n=1 Tax=Elusimicrob... [more]
A0A285V1S3_9ACTN6.500e-940.52Uncharacterized domain 1-containing protein n=1 Ta... [more]
UPI001909D43C9.250e-940.68PaaI family thioesterase n=2 Tax=Blastococcus TaxI... [more]
A0A1E7IEX5_9DELT1.040e-831.94Thioesterase n=2 Tax=Deltaproteobacteria TaxID=282... [more]
Q1K443_DESA61.080e-830.94Thioesterase superfamily n=1 Tax=Desulfuromonas ac... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006683Thioesterase domainPFAMPF030614HBTcoord: 93..156
e-value: 1.4E-7
score: 31.8
NoneNo IPR availableGENE3D3.10.129.10Hotdog Thioesterasecoord: 55..184
e-value: 4.9E-27
score: 97.1
NoneNo IPR availablePANTHERPTHR47260UPF0644 PROTEIN PB2B4.06coord: 69..184
NoneNo IPR availableCDDcd03443PaaI_thioesterasecoord: 74..180
e-value: 3.28017E-13
score: 62.9606
IPR029069HotDog domain superfamilySUPERFAMILY54637Thioesterase/thiol ester dehydrase-isomerasecoord: 31..179

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_203contigContig_203:50707..54140 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|354014mRNA_15753Tribonema minus UTEX_B_3156 mRNAContig_203 50707..54329 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|354014|estExt_Genemark1.C_Ctg_2030010 ID=Trimin1|354014|estExt_Genemark1.C_Ctg_2030010|Name=jgi.p|Trimin1|354014|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=301bp
MRVSYVKVDGQGATEDEVPAFLREELTLTRHVRTGFDIDFPAIHANPAVH
AALGYKGQYFSSGRMDIKRWWNERDRSIVGSVYFTKECEGPPGVTHGGAI
ATALDDVLGTQVWRYAGYHRRGMPTMSLTIRYIKKVPMETLLVVRASVTR
VLGRRVHVMGGLYEPLTGEPYAEADGVFFLPRPVDPEDLLPYEEALRRFG
RLAPAEDQVPEIRAYYAARRPSGMAKLALLLRTAFACVSAAAAGALLLRT
VERTRMRAAPVTAHRIRRRVVTSGRHGGERRRCVRAWSLRGDGARQPWQR
*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006683Thioestr_dom
IPR029069HotDog_dom_sf