Trimin1|354009|estExt_Genemark1.C_Ctg_2030002 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|354009
Unique Name	Trimin1\|354009\|estExt_Genemark1.C_Ctg_2030002
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	919

Homology

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BLAST of jgi.p|Trimin1|354009 vs. uniprot
Match: A0A836CJM5_9STRA (Uncharacterized protein n=3 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJM5_9STRA)

HSP 1 Score: 1333 bits (3450), Expect = 0.000e+0
Identity = 918/918 (100.00%), Postives = 918/918 (100.00%), Query Frame = 0

Query:    1 MAGAARVISLKGPRRIDPAAPVIQFAEDLELIQSFPVHLSFVPLRQPFKSTQWEISQALKKLCPRDSPPLSLEVTLASRGPVTVTARFSDEQSLKVMARAVRHKVLNVSGALLMGDVIEKDVGKSSAAHEVAKQHLTVVLDGVPAKWVECGENGSMEPSRKLLQAMRGFGPVHAVELARSDGDGGXXXXXXXAGDNVDAVISTLSPLNVTIWTKFAMTEGFDRALAGLAGRVLRRKGVAMLAPINVSADADGYMADEQREARRLQRLAAAKEAQQAVARLEQHQRTLAKARAGHRSNVLLGPQMSETLDRAASESQRGDFNVSTTDSVVTAAARAQDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVQRRLAYLLELCGEEGGSAGLGEETLTAVQQGADALQALIAAAELRAAAAAALSTVLLAALEDDWVAALDGVVDSIVPPMSWQWGGGVDALSEDVWEVMADERRALEAEAAAFGAAEALLRGLLRASEQLQEATDTLRVLESSIATDPDNRGLEQSETVVPLLQRARDTLAAARAGAPIDDGAEPVLARLAAARDAAAALRKGLAAERARRAADRAALASEVEARRRXXXXXXXXXAAAEATLRSEVATRLTGLKRAQALLREAVRLEDARRRLAALQRQRTHAAXXXXXXXXXXXXXXXXAEAGPDPSERWMPGDDEVEVVEVVEGEAKQRPPPLSPPRGPDPASRWPLISGLRDWDMAYEKGAFEARGRGWWDGYRGEDWEDEEGLEPYLLASKVVIPVREPEGEAALLNGGGXXDGDGGDXXXXXXXEXXXXXXXXXXXXXXXXXXXXXXXAGAVEEDAQALEQELRDAVLRALQKR 918
            MAGAARVISLKGPRRIDPAAPVIQFAEDLELIQSFPVHLSFVPLRQPFKSTQWEISQALKKLCPRDSPPLSLEVTLASRGPVTVTARFSDEQSLKVMARAVRHKVLNVSGALLMGDVIEKDVGKSSAAHEVAKQHLTVVLDGVPAKWVECGENGSMEPSRKLLQAMRGFGPVHAVELARSDGDGGXXXXXXXAGDNVDAVISTLSPLNVTIWTKFAMTEGFDRALAGLAGRVLRRKGVAMLAPINVSADADGYMADEQREARRLQRLAAAKEAQQAVARLEQHQRTLAKARAGHRSNVLLGPQMSETLDRAASESQRGDFNVSTTDSVVTAAARAQDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVQRRLAYLLELCGEEGGSAGLGEETLTAVQQGADALQALIAAAELRAAAAAALSTVLLAALEDDWVAALDGVVDSIVPPMSWQWGGGVDALSEDVWEVMADERRALEAEAAAFGAAEALLRGLLRASEQLQEATDTLRVLESSIATDPDNRGLEQSETVVPLLQRARDTLAAARAGAPIDDGAEPVLARLAAARDAAAALRKGLAAERARRAADRAALASEVEARRRXXXXXXXXXAAAEATLRSEVATRLTGLKRAQALLREAVRLEDARRRLAALQRQRTHAAXXXXXXXXXXXXXXXXAEAGPDPSERWMPGDDEVEVVEVVEGEAKQRPPPLSPPRGPDPASRWPLISGLRDWDMAYEKGAFEARGRGWWDGYRGEDWEDEEGLEPYLLASKVVIPVREPEGEAALLNGGGXXDGDGGDXXXXXXXEXXXXXXXXXXXXXXXXXXXXXXXAGAVEEDAQALEQELRDAVLRALQKR
Sbjct:    1 MAGAARVISLKGPRRIDPAAPVIQFAEDLELIQSFPVHLSFVPLRQPFKSTQWEISQALKKLCPRDSPPLSLEVTLASRGPVTVTARFSDEQSLKVMARAVRHKVLNVSGALLMGDVIEKDVGKSSAAHEVAKQHLTVVLDGVPAKWVECGENGSMEPSRKLLQAMRGFGPVHAVELARSDGDGGXXXXXXXAGDNVDAVISTLSPLNVTIWTKFAMTEGFDRALAGLAGRVLRRKGVAMLAPINVSADADGYMADEQREARRLQRLAAAKEAQQAVARLEQHQRTLAKARAGHRSNVLLGPQMSETLDRAASESQRGDFNVSTTDSVVTAAARAQDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVQRRLAYLLELCGEEGGSAGLGEETLTAVQQGADALQALIAAAELRAAAAAALSTVLLAALEDDWVAALDGVVDSIVPPMSWQWGGGVDALSEDVWEVMADERRALEAEAAAFGAAEALLRGLLRASEQLQEATDTLRVLESSIATDPDNRGLEQSETVVPLLQRARDTLAAARAGAPIDDGAEPVLARLAAARDAAAALRKGLAAERARRAADRAALASEVEARRRXXXXXXXXXAAAEATLRSEVATRLTGLKRAQALLREAVRLEDARRRLAALQRQRTHAAXXXXXXXXXXXXXXXXAEAGPDPSERWMPGDDEVEVVEVVEGEAKQRPPPLSPPRGPDPASRWPLISGLRDWDMAYEKGAFEARGRGWWDGYRGEDWEDEEGLEPYLLASKVVIPVREPEGEAALLNGGGXXDGDGGDXXXXXXXEXXXXXXXXXXXXXXXXXXXXXXXAGAVEEDAQALEQELRDAVLRALQKR 918

[Close]

BLAST of jgi.p|Trimin1|354009 vs. uniprot
Match: A0A835YTE8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTE8_9STRA)

HSP 1 Score: 910 bits (2353), Expect = 0.000e+0
Identity = 647/682 (94.87%), Postives = 647/682 (94.87%), Query Frame = 0

Query:    1 MAGAARVISLKGPRRIDPAAPVIQFAEDLELIQSFPVHLSFVPLRQPFKSTQWEISQALKKLCPRDSPPLSLEVTLASRGPVTVTARFSDEQSLKVMARAVRHKVLNVSGALLMGDVIEKDVGKSSAAHEVAKQHLTVVLDGVPAKWVECGENGSMEPSRKLLQAMRGFGPVHAVELARSDGDGGXXXXXXXAGDNVDAVISTLSPLNVTIWTKFAMTEGFDRALAGLAGRVLRRKGVAMLAPINVSADADGYMADEQREARRLQRLAAAKEAQQAVARLEQHQRTLAKARAGHRSNVLLGPQMSETLDRAASESQRGDFNVSTTDSVVTAAARAQDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVQRRLAYLLELCGEEGGSAGLGEETLTAVQQGADALQALIAAAELRAAAAAALSTVLLAALEDDWVAALDGVVDSIVPPMSWQWGGGVDALSEDVWEVMADERRALEAEAAAFGAAEALLRGLLRASEQLQEATDTLRVLESSIATDPDNRGLEQSETVVPLLQRARDTLAAARAGAPIDDGAEPVLARLAAARDAAAALRKGLAAERARRAADRAALASEVEARRRXXXXXXXXXAAAEATLR 682
            MAGAARVISLKGPRRIDPAAPVIQFAEDLELIQSFPVHLSFVPLRQPFKSTQWEISQALKKLCPRDSPPLSLEVTLASRGPVTVTARFSDEQSLKVMARAVRHKVLNVSGALLMGDVIEKDVGKSSAAHEVAKQHLTVVLDGVPAKWVECGENGSMEPSRKLLQAMRGFGPVHAVELARSDGDGGXXXXXXXAGDNVDAVISTLSPLNVTIWTKFAMTEGFDRALAGLAGRVLRRKGVAMLAPINVSADADGYMADEQREARRLQRLAAAKEAQQAVARLEQHQRTLAKARAGHRSNVLLGPQMSETLDRAASESQRGDFNVSTTDSVVTAAARAQDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVQRRLAYLLELCGEEGGSAGLGEETLTAVQQGADALQALIAAAELRAAAAAALSTVLLAALEDDWVAALDGVVDSIVPPMSWQWGGGVDALSEDVWEVMADERRALEAEAAAFGAAEALLRGLLRASEQLQEATDTLRVLESSIATDPDNRGLEQSET                          PVLARLAAARDAAAALRKGLAAER       AALASEVEARR XXXXXXXX AAAEATLR
Sbjct:    1 MAGAARVISLKGPRRIDPAAPVIQFAEDLELIQSFPVHLSFVPLRQPFKSTQWEISQALKKLCPRDSPPLSLEVTLASRGPVTVTARFSDEQSLKVMARAVRHKVLNVSGALLMGDVIEKDVGKSSAAHEVAKQHLTVVLDGVPAKWVECGENGSMEPSRKLLQAMRGFGPVHAVELARSDGDGGXXXXXXXAGDNVDAVISTLSPLNVTIWTKFAMTEGFDRALAGLAGRVLRRKGVAMLAPINVSADADGYMADEQREARRLQRLAAAKEAQQAVARLEQHQRTLAKARAGHRSNVLLGPQMSETLDRAASESQRGDFNVSTTDSVVTAAARAQDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVQRRLAYLLELCGEEGGSAGLGEETLTAVQQGADALQALIAAAELRAAAAAALSTVLLAALEDDWVAALDGVVDSIVPPMSWQWGGGVDALSEDVWEVMADERRALEAEAAAFGAAEALLRGLLRASEQLQEATDTLRVLESSIATDPDNRGLEQSET--------------------------PVLARLAAARDAAAALRKGLAAERXXXXXXXAALASEVEARRXXXXXXXXXRAAAEATLR 656

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|354009 vs. uniprot

BLAST of jgi.p|Trimin1|354009 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A836CJM5_9STRA	0.000e+0	100.00	Uncharacterized protein n=3 Tax=Tribonema minus Ta...	[more]
A0A835YTE8_9STRA	0.000e+0	94.87	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 695..725
None	No IPR available	COILS	Coil	Coil	coord: 254..293
None	No IPR available	COILS	Coil	Coil	coord: 385..408
None	No IPR available	COILS	Coil	Coil	coord: 561..581
None	No IPR available	COILS	Coil	Coil	coord: 893..913
None	No IPR available	COILS	Coil	Coil	coord: 363..383
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 716..787
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 841..904
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 291..318
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 731..756
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 300..318

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_203	contig	Contig_203:2924..8436 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|354009	mRNA_15745	Tribonema minus UTEX_B_3156	mRNA	Contig_203 2924..8889 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|354009|estExt_Genemark1.C_Ctg_2030002 ID=Trimin1|354009|estExt_Genemark1.C_Ctg_2030002|Name=jgi.p|Trimin1|354009|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=919bp
MAGAARVISLKGPRRIDPAAPVIQFAEDLELIQSFPVHLSFVPLRQPFKS
TQWEISQALKKLCPRDSPPLSLEVTLASRGPVTVTARFSDEQSLKVMARA
VRHKVLNVSGALLMGDVIEKDVGKSSAAHEVAKQHLTVVLDGVPAKWVEC
GENGSMEPSRKLLQAMRGFGPVHAVELARSDGDGGGGADGSGAGDNVDAV
ISTLSPLNVTIWTKFAMTEGFDRALAGLAGRVLRRKGVAMLAPINVSADA
DGYMADEQREARRLQRLAAAKEAQQAVARLEQHQRTLAKARAGHRSNVLL
GPQMSETLDRAASESQRGDFNVSTTDSVVTAAARAQDKLDAARAAVERGR
GASKQAQAVDRALAEARAAAAAALQAVRDAQDAAAAAAEAARAEAARRRD
ALARAEAEPVVQQALAALPEPRRAEAAGGAQAAAAAEAVQRRLAYLLELC
GEEGGSAGLGEETLTAVQQGADALQALIAAAELRAAAAAALSTVLLAALE
DDWVAALDGVVDSIVPPMSWQWGGGVDALSEDVWEVMADERRALEAEAAA
FGAAEALLRGLLRASEQLQEATDTLRVLESSIATDPDNRGLEQSETVVPL
LQRARDTLAAARAGAPIDDGAEPVLARLAAARDAAAALRKGLAAERARRA
ADRAALASEVEARRRREEDAAAARAAAEATLRSEVATRLTGLKRAQALLR
EAVRLEDARRRLAALQRQRTHAAAAAAPEASTRGRKRRRAEAGPDPSERW
MPGDDEVEVVEVVEGEAKQRPPPLSPPRGPDPASRWPLISGLRDWDMAYE
KGAFEARGRGWWDGYRGEDWEDEEGLEPYLLASKVVIPVREPEGEAALLN
GGGGGDGDGGDGGGNSDGEGGGASSNGDAAPAGDTKGGEGGAAGAVEEDA
QALEQELRDAVLRALQKR*