Trimin1|348181|estExt_Genemark1.C_Ctg_200137 (polypeptide) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|348181 vs. uniprot
Match: A0A836CI66_9STRA (Sin-like protein conserved region-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI66_9STRA) HSP 1 Score: 949 bits (2454), Expect = 0.000e+0 Identity = 533/533 (100.00%), Postives = 533/533 (100.00%), Query Frame = 0
Query: 1 MQEEAMDDYDPDPVIRELDVFVSKGLQDELFVLQYPMRPLDRPLPDPISAKIKPLNRLLEIKHEIKQAGKNFDPAAPEHLLLEELTHAAAAVPAATNYAIGVVRDNELHLTPLSGILQMRPAFRHVDIQAAIEEPDDDDRAAAEKPVAGEPRQVMFKRKETERATQARQRSYAYKRDREDAERWVDLAVHDAASAHARDEFENMFCGDRARPICFLPGPAAYLRRLDHLHPGADAAALPAGTGDSAAPLDLAAADGXXXXXXXXXXXXGGGTGASYGVGHAAPLPVDQLSALKGVGALRAYVRAAVVITHDMLKEVAEVASDAAVARELSGFAVPVRGAWVLRSERLLPATAAGXXXXXXXXXXRARDAALALLHAHGGVSRAALQRRFEIVPGATLKTVLEGVAALDRGLQCWELKVEDTFDLALALPGVAAAADAEWRAALAALAAEWGGAEAVQACAVTVRPPYAQRCAAHLSGRFYHGGGGENGAGGXXXXDHGGSRGGFGDTDSAAFGLGFGPASPGDGSAGARGRRG 533
MQEEAMDDYDPDPVIRELDVFVSKGLQDELFVLQYPMRPLDRPLPDPISAKIKPLNRLLEIKHEIKQAGKNFDPAAPEHLLLEELTHAAAAVPAATNYAIGVVRDNELHLTPLSGILQMRPAFRHVDIQAAIEEPDDDDRAAAEKPVAGEPRQVMFKRKETERATQARQRSYAYKRDREDAERWVDLAVHDAASAHARDEFENMFCGDRARPICFLPGPAAYLRRLDHLHPGADAAALPAGTGDSAAPLDLAAADGXXXXXXXXXXXXGGGTGASYGVGHAAPLPVDQLSALKGVGALRAYVRAAVVITHDMLKEVAEVASDAAVARELSGFAVPVRGAWVLRSERLLPATAAGXXXXXXXXXXRARDAALALLHAHGGVSRAALQRRFEIVPGATLKTVLEGVAALDRGLQCWELKVEDTFDLALALPGVAAAADAEWRAALAALAAEWGGAEAVQACAVTVRPPYAQRCAAHLSGRFYHGGGGENGAGGXXXXDHGGSRGGFGDTDSAAFGLGFGPASPGDGSAGARGRRG
Sbjct: 1 MQEEAMDDYDPDPVIRELDVFVSKGLQDELFVLQYPMRPLDRPLPDPISAKIKPLNRLLEIKHEIKQAGKNFDPAAPEHLLLEELTHAAAAVPAATNYAIGVVRDNELHLTPLSGILQMRPAFRHVDIQAAIEEPDDDDRAAAEKPVAGEPRQVMFKRKETERATQARQRSYAYKRDREDAERWVDLAVHDAASAHARDEFENMFCGDRARPICFLPGPAAYLRRLDHLHPGADAAALPAGTGDSAAPLDLAAADGXXXXXXXXXXXXGGGTGASYGVGHAAPLPVDQLSALKGVGALRAYVRAAVVITHDMLKEVAEVASDAAVARELSGFAVPVRGAWVLRSERLLPATAAGXXXXXXXXXXRARDAALALLHAHGGVSRAALQRRFEIVPGATLKTVLEGVAALDRGLQCWELKVEDTFDLALALPGVAAAADAEWRAALAALAAEWGGAEAVQACAVTVRPPYAQRCAAHLSGRFYHGGGGENGAGGXXXXDHGGSRGGFGDTDSAAFGLGFGPASPGDGSAGARGRRG 533
BLAST of jgi.p|Trimin1|348181 vs. uniprot
Match: D7FNL4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNL4_ECTSI) HSP 1 Score: 199 bits (505), Expect = 6.810e-51 Identity = 160/450 (35.56%), Postives = 223/450 (49.56%), Query Frame = 0
Query: 10 DPD-PVIRELDVFVSKGLQDELFVLQYPMRPLDRPLPDPISAKIKPLNRLLEIKHEIKQAGKNFDPAAPEHLLLEELTHAAAAVPAATNYAIGVVRDNELHLTPLSGILQMRPAFRHVD------IQAAIEEPDDDDRAAAEKPVAGEPRQVMFKRKETERATQARQRSYAYKRDREDAERWVDLAVHDAASAHARDEFENMFCGD-----RARPICFLPGPAAYLRRLDHLHP----GADAAALPAGTGDSAAP-LDLAAADGXXXXXXXXXXXXGGGTGASYGVGHAAPLPVDQLSALKGVGALRAYVRAAVVITHDMLKEVAEVASDA---AVARELSGFAVPVRGAWVLRSERLLPATAAGXXXXXXXXXXRARDAALALLHAHGGVSRAALQRRFEIVPGATLKTVLEGVAALDRGLQCWELKVEDTFDLALALPGVAAAADAEW 439
DPD P+ R LDV+++ L+D L++LQYPM+P DRP P++ K+K N LLE++H IKQ GK++D AP L H + V ATN+A GV+R +ELHLTP+ +QMRP F+H+D I+ +++PD+ AEKP +QV FK+KE+ERAT AR+ SYAYK+ EDAE WV L VH + DEF MF D R P YL+ LD++ G +A G G S A +DL A GTG +Y + P QL G + Y++ A ++ ML +V ++ DA A++ E + +RG W + P A LLH +G VSR LQRRF + TLK +L +A LD + W KV+D + P + + W
Sbjct: 60 DPDDPLDRVLDVYLADELEDHLYLLQYPMQPADRPSSTPLAVKVKAANHLLEVEHPIKQGGKHYDKNAPGQLRRATQKHTGSRVRPATNFAFGVIRSDELHLTPIHATMQMRPCFQHIDEAKAQEIEMDLDDPDNGGTKEAEKP-----QQVSFKKKESERATAARKSSYAYKKSIEDAEPWVALEVHGQNDDRSLDEFSRMFVDDDASANRGTTTKEFPPCERYLQGLDYMEEYDENGESFSA--GGRGRSLADSIDLVTA----------------GTG-TYSPVNLPAAPAHQLG---GDAKVVGYLKLAHLVPFSMLLDVTNMSPDAVLQALSVEGRQKGLLMRGNWAALPADVWP--------RGPPHAADCLSVAQCLLHRYGAVSRPDLQRRFPELEPVTLKELLLRIAELDTVDRRWVPKVKDGLTFGMEHPEIVELEEERW 474
BLAST of jgi.p|Trimin1|348181 vs. uniprot
Match: D0NBY8_PHYIT (DNA-directed RNA polymerase III subunit RPC5-like protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NBY8_PHYIT) HSP 1 Score: 163 bits (413), Expect = 4.900e-41 Identity = 94/221 (42.53%), Postives = 140/221 (63.35%), Query Frame = 0
Query: 10 DPDPVIRELDVFVSKGLQDELFVLQYPMRPLDRPLPDPIS-AKIKPLNRLLEIKHEIKQAGKNFDPAAPEHLLLEELTHAAAAVPAATNYAIGVVRDNELHLTPLSGILQMRPAFRHVDIQAAIEEPDDDDRAAAEKP-VAGEPRQVMFKRKETERATQARQRSYAYKRDREDAERWVDLAVHDAASAHARDEFENMFCGDRARPICFLPGPAAYLRRLDH 228
D DPV+RE+ V ++ L+ L+++Q+P+RP RP+P+P A+IKP N+L++I + Q ++FD A E+L + L +++VPA +NY +GV R +LHLTPLS I+QMRP+ H+D A EE D + E P V + Q FK+K++ERA A Q SYAYK+ + DAE W++L V D +SA A DEFEN+F A + + P Y++ L +
Sbjct: 2 DDDPVVREIPVHLADELRQNLYMVQFPLRPTYRPMPEPPRRARIKPNNQLMQIDFPVDQRSEHFDQDAEEYLKQKHLRLHSSSVPALSNYVVGVFRQGQLHLTPLSAIMQMRPSLSHIDDAANEEEEDMEVEEKMEPPPVEMKEVQFQFKKKQSERAMSAIQNSYAYKKQQIDAENWIELQVQDKSSAGADDEFENLFSEKEAEVMSTMT-PDEYIKALQY 221
BLAST of jgi.p|Trimin1|348181 vs. uniprot
Match: A0A833SWM0_PHYIN (Sin-like protein conserved region n=2 Tax=Phytophthora TaxID=4783 RepID=A0A833SWM0_PHYIN) HSP 1 Score: 163 bits (413), Expect = 5.460e-41 Identity = 94/221 (42.53%), Postives = 140/221 (63.35%), Query Frame = 0
Query: 10 DPDPVIRELDVFVSKGLQDELFVLQYPMRPLDRPLPDPIS-AKIKPLNRLLEIKHEIKQAGKNFDPAAPEHLLLEELTHAAAAVPAATNYAIGVVRDNELHLTPLSGILQMRPAFRHVDIQAAIEEPDDDDRAAAEKP-VAGEPRQVMFKRKETERATQARQRSYAYKRDREDAERWVDLAVHDAASAHARDEFENMFCGDRARPICFLPGPAAYLRRLDH 228
D DPV+RE+ V ++ L+ L+++Q+P+RP RP+P+P A+IKP N+L++I + Q ++FD A E+L + L +++VPA +NY +GV R +LHLTPLS I+QMRP+ H+D A EE D + E P V + Q FK+K++ERA A Q SYAYK+ + DAE W++L V D +SA A DEFEN+F A + + P Y++ L +
Sbjct: 2 DDDPVVREIPVHLADELRQNLYMVQFPLRPTYRPMPEPPRRARIKPNNQLMQIDFPVDQRSEHFDQDAEEYLKQKHLRLHSSSVPALSNYVVGVFRQGQLHLTPLSAIMQMRPSLSHIDDAANEEEEDMEVEEKMEPPPVEMKEVQFQFKKKQSERAMSAIQNSYAYKKQQIDAENWIELQVQDKSSAGADDEFENLFSEKEAEVMSTMT-PDEYIKALQY 221
BLAST of jgi.p|Trimin1|348181 vs. uniprot
Match: H3GH35_PHYRM (Uncharacterized protein n=2 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GH35_PHYRM) HSP 1 Score: 163 bits (412), Expect = 8.560e-41 Identity = 92/226 (40.71%), Postives = 142/226 (62.83%), Query Frame = 0
Query: 5 AMDDYDPDPVIRELDVFVSKGLQDELFVLQYPMRPLDRPLPDPIS-AKIKPLNRLLEIKHEIKQAGKNFDPAAPEHLLLEELTHAAAAVPAATNYAIGVVRDNELHLTPLSGILQMRPAFRHVDIQAAIEEPDDDDRAAAEKPVAGEPR-QVMFKRKETERATQARQRSYAYKRDREDAERWVDLAVHDAASAHARDEFENMFCGDRARPICFLPGPAAYLRRLDH 228
AMDD DPV+RE+ V ++ L+ L+++Q+P+RP RP+P+P A++KP N+L+++ + Q ++FD A E+L + L +++VPA TNYA+GV R +LHLTPLS ++QMRP+ H+D EE D + E P A Q FK+K++ERA A Q SYAYK+ + DAE W++L V D +S+ A DEFEN+F ++ + P Y++ + +
Sbjct: 6 AMDD---DPVVREIPVHLADELRHSLYLVQFPLRPTYRPMPEPPRRARVKPNNQLMQLDFPVDQRSEHFDQDAEEYLKQKHLRLQSSSVPALTNYAVGVFRQGQLHLTPLSSVMQMRPSLSHIDDAVNEEEEDMEVEEKVEAPAAEMKEVQFQFKKKQSERALSAIQNSYAYKKQQIDAENWIELQVQDKSSSGADDEFENLF-SEKEEEVVSSMTPDEYIKAMQY 227
BLAST of jgi.p|Trimin1|348181 vs. uniprot
Match: A0A484DWJ2_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DWJ2_BRELC) HSP 1 Score: 161 bits (408), Expect = 2.770e-40 Identity = 91/221 (41.18%), Postives = 141/221 (63.80%), Query Frame = 0
Query: 10 DPDPVIRELDVFVSKGLQDELFVLQYPMRPLDRPLPDPIS-AKIKPLNRLLEIKHEIKQAGKNFDPAAPEHLLLEELTHAAAAVPAATNYAIGVVRDNELHLTPLSGILQMRPAFRHVDIQAAIEEPDDDDRAAAEKPVAGEPR-QVMFKRKETERATQARQRSYAYKRDREDAERWVDLAVHDAASAHARDEFENMFCGDRARPICFLPGPAAYLRRLDH 228
D DPV+RE+ V ++ L++ L+++Q+P+RP RP+P+P A++KP N+L+++ + Q ++FD A +++ + L ++ VPA +NYA+GV R +LHLTPLS ILQMRP+ ++D EE D D E P A Q FK+K++ERA A Q SYA+K+ + DAE W++L VH+ ++A A DEFEN+F ++ I PA Y+R L +
Sbjct: 3 DDDPVVREIPVHLADELRNNLYLVQFPLRPTYRPMPEPPRRARVKPKNQLMQLDFPVDQRSEHFDQDAEDYIKQKTLRLQSSCVPALSNYAVGVFRQGQLHLTPLSSILQMRPSLSYIDDAINEEEIDIDMEEKVEPPPAEMKEVQFQFKKKQSERALSAIQNSYAFKKQQIDAENWIELQVHELSTAGADDEFENLF-SEKEEEIVSDMTPAQYIRALQY 222
BLAST of jgi.p|Trimin1|348181 vs. uniprot
Match: A0A421GTH3_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421GTH3_9STRA) HSP 1 Score: 160 bits (404), Expect = 1.180e-39 Identity = 90/218 (41.28%), Postives = 141/218 (64.68%), Query Frame = 0
Query: 12 DPVIRELDVFVSKGLQDELFVLQYPMRPLDRPLPDPIS-AKIKPLNRLLEIKHEIKQAGKNFDPAAPEHLLLEELTHAAAAVPAATNYAIGVVRDNELHLTPLSGILQMRPAFRHVDIQAAIEEPDDDDRAAAEKPVAGEPRQVMF--KRKETERATQARQRSYAYKRDREDAERWVDLAVHDAASAHARDEFENMFCGDRARPICFLPGPAAYLRRL 226
DPV+RE+ V ++ GL++ L+++Q+P+RP RP+P P A+IKP N+LL++ + Q ++FD A ++L + L ++ VPA TNY +GV R +LHLTP+S ++QMRP+ H+D AA EE +D + +P E ++V F K+K++ERA A Q SYAY++ + DAE+WV+L V D SA A DEFEN+F ++ + P Y++ +
Sbjct: 14 DPVVREIPVHLADGLRENLYMVQFPLRPTYRPMPTPPHRARIKPNNQLLQLDFPVDQRSEHFDQDAEDYLKQKHLRLESSNVPALTNYTVGVFRQGQLHLTPVSAVMQMRPSLSHID-DAANEEEEDMEVEEKVEPPPAEMKEVQFQFKKKQSERAISAIQNSYAYRKQQIDAEQWVELQVQDKNSAAADDEFENLF-SEKEEEVKSTMSPDEYIKAM 229
BLAST of jgi.p|Trimin1|348181 vs. uniprot
Match: A0A225UP76_9STRA (DNA-directed RNA polymerase III subunit RPC5 n=3 Tax=Phytophthora TaxID=4783 RepID=A0A225UP76_9STRA) HSP 1 Score: 159 bits (402), Expect = 1.770e-39 Identity = 134/421 (31.83%), Postives = 202/421 (47.98%), Query Frame = 0
Query: 12 DPVIRELDVFVSKGLQDELFVLQYPMRPLDRPLPDPIS-AKIKPLNRLLEIKHEIKQAGKNFDPAAPEHLLLEELTHAAAAVPAATNYAIGVVRDNELHLTPLSGILQMRPAFRHVDIQAAIEEPDDDDRAAAEKPVAGEPRQVMF--KRKETERATQARQRSYAYKRDREDAERWVDLAVHDAASAHARDEFENMFCGDRARPICFLPGPAAYLRRLDHLHPGADAAALPAGTGDSAAPLDLAAADGXXXXXXXXXXXXGG----GTGASYGVGHAAPLPVDQLSALKGVGALRAYVRAAVVITHDMLKEVAEVASDAAVARELSGFAVPVRGAWVLRSERLLPATAAGXXXXXXXXXXRAR-DAALALLHAHGGVSRAALQRRFEIVPGATLKTVLEGVAALDRGLQCWELKV--EDTF 422
DPV+RE+ V ++ L+ L+++Q+P+RP RP+P+P A+IKP N+L+++ + ++FD A E+L + L + +VPA +NY +GV R +LHLTPLS ++QMRP+ H+D A EE +D + +P E ++V F K+K++ERA A Q SYAYK+ + DAE W++L V D +SA A D+FEN+F ++ + P Y++ + + A AP + A D G G Y V L DQ+ + D L E+ S+ + L AV VRG RLLP +A RAR D AL GVSR L +F + KT+L A L+ + W ++ +DTF
Sbjct: 3 DPVVREIPVHLADELRQNLYLVQFPLRPTYRPMPEPPRRARIKPNNQLMQLDFPVDHRSEHFDQDAEEYLKQKHLRLQSTSVPALSNYVVGVFRQGQLHLTPLSAVMQMRPSLSHID-DAVNEEEEDMEMEEKVEPPPAEIKEVQFQFKKKQSERAISAIQNSYAYKKQQIDAENWIELQVQDKSSAGADDDFENLF-SEKEEEVVSTMTPDEYIKAMQYR--------ANASVDKPTAPTNPAQTDEDEEMKDESMEPISGHLLDGVDTKY-VDVLRLLATDQI------------------MHFDTLAELLPARSEEELLNALKHVAVHVRG-------RLLPTSA---LVCHGEATMRARNDIIKALTKTPSGVSRTELVEKFSL-DADVAKTILSEFAVLESATRKWSFRLGPDDTF 383
BLAST of jgi.p|Trimin1|348181 vs. uniprot
Match: A0A0W8DI48_PHYNI (DNA-directed RNA polymerase III subunit RPC5 n=12 Tax=Phytophthora TaxID=4783 RepID=A0A0W8DI48_PHYNI) HSP 1 Score: 158 bits (399), Expect = 2.620e-39 Identity = 86/199 (43.22%), Postives = 135/199 (67.84%), Query Frame = 0
Query: 10 DPDPVIRELDVFVSKGLQDELFVLQYPMRPLDRPLPDPIS-AKIKPLNRLLEIKHEIKQAGKNFDPAAPEHLLLEELTHAAAAVPAATNYAIGVVRDNELHLTPLSGILQMRPAFRHVDIQAAIEEPDDDDRAAAEKPVAGEPRQVMF--KRKETERATQARQRSYAYKRDREDAERWVDLAVHDAASAHARDEFENMF 205
D DPV+RE+ V ++ L+ L+++Q+P+RP RP+P+P A+IKP N+L+++ + Q ++FD A ++L + L +++VPA +NY +GV R +LHLTPLS ++QMRP+ H+D AA EE +D + +P E ++V F K+K++ERA A Q S+AYK+ + DAE+W++L V D +SA A DEFEN+F
Sbjct: 2 DDDPVVREIPVHLADELRQNLYMVQFPLRPTYRPMPEPPRRARIKPNNQLMQLDFPVDQRSEHFDQDAEDYLKQKHLRLQSSSVPALSNYVVGVFRQGQLHLTPLSAVMQMRPSLSHID-DAANEEEEDMEVEEKVEPPPAEMKEVQFQFKKKQSERAISAIQNSFAYKKQQIDAEKWIELQVQDKSSAGADDEFENLF 199
BLAST of jgi.p|Trimin1|348181 vs. uniprot
Match: A0A0N7L4J2_PLAHL (Dna-directed rna polymerase iii subunit rpc5-like protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L4J2_PLAHL) HSP 1 Score: 158 bits (400), Expect = 3.210e-39 Identity = 86/220 (39.09%), Postives = 139/220 (63.18%), Query Frame = 0
Query: 10 DPDPVIRELDVFVSKGLQDELFVLQYPMRPLDRPLPDPIS-AKIKPLNRLLEIKHEIKQAGKNFDPAAPEHLLLEELTHAAAAVPAATNYAIGVVRDNELHLTPLSGILQMRPAFRHVDIQAAIEEPDDDDRAAAEKPVAGEPRQVMFKRKETERATQARQRSYAYKRDREDAERWVDLAVHDAASAHARDEFENMFCGDRARPICFLPGPAAYLRRLDH 228
D DP++RE+ V ++ L+ L+++Q+P+RP RP+P+P A+IKP N+L+++ + Q ++FD A +++ + L +++VPA +NYA+GV R +LHLTPL+ I+QMRP+ H+D AA EE +D + P + Q FK+K++ERA A Q SYAYK+ + DAE W++L V D S A +EFEN+F ++ + P Y++ L +
Sbjct: 2 DDDPIVREIPVHLADELRRNLYMVQFPLRPTYRPMPEPPHRARIKPQNQLMQLDFPVDQRSEHFDQDAEDYIKQKHLRLQSSSVPALSNYAVGVFRQGQLHLTPLTSIMQMRPSLSHID-DAANEEEEDLEEKIEPPPAELKEVQFQFKKKQSERAISAIQNSYAYKKQQIDAENWIELQVQDKNSCGAEEEFENLF-SEKEEEVVSTMTPDQYIKALQY 219 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348181 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Trimin1|348181|estExt_Genemark1.C_Ctg_200137 ID=Trimin1|348181|estExt_Genemark1.C_Ctg_200137|Name=jgi.p|Trimin1|348181|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=626bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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