Trimin1|179627|e_gw1.197.16.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|179627
Unique NameTrimin1|179627|e_gw1.197.16.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length88
Homology
BLAST of jgi.p|Trimin1|179627 vs. uniprot
Match: A0A835Z6J6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6J6_9STRA)

HSP 1 Score: 185 bits (470), Expect = 1.210e-59
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 0
Query:    1 MEHYRIMLAGCSVYFDRAVLLHRYPRLRLYVGHKTIELSSLLGIVRRWRPDLLRSLPPTQECHRALIDVMEAVSLLRWFWRSFLVGV 87
            MEHYRIMLAGCSVYFDRAVLLHRYPRLRLYVGHKTIELSSLLGIVRRWRPDLLRSLPPTQECHRALIDVMEAVSLLRWFWRSFLVGV
Sbjct:    1 MEHYRIMLAGCSVYFDRAVLLHRYPRLRLYVGHKTIELSSLLGIVRRWRPDLLRSLPPTQECHRALIDVMEAVSLLRWFWRSFLVGV 87          
BLAST of jgi.p|Trimin1|179627 vs. uniprot
Match: A0A835ZEI1_9STRA (Ribonuclease H-like domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEI1_9STRA)

HSP 1 Score: 175 bits (444), Expect = 2.090e-53
Identity = 81/87 (93.10%), Postives = 84/87 (96.55%), Query Frame = 0
Query:    1 MEHYRIMLAGCSVYFDRAVLLHRYPRLRLYVGHKTIELSSLLGIVRRWRPDLLRSLPPTQECHRALIDVMEAVSLLRWFWRSFLVGV 87
            MEHYRIMLAGCSVYFDRAVLLH YPRLR+Y+GHKTIELSSLL IVRRWRPDLLRSLPPTQECHRAL+DVMEAVSLLRWFWRSFLV V
Sbjct:  170 MEHYRIMLAGCSVYFDRAVLLHCYPRLRMYIGHKTIELSSLLEIVRRWRPDLLRSLPPTQECHRALVDVMEAVSLLRWFWRSFLVSV 256          
BLAST of jgi.p|Trimin1|179627 vs. uniprot
Match: A0A835Z4U2_9STRA (Ribonuclease H-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4U2_9STRA)

HSP 1 Score: 142 bits (358), Expect = 1.310e-40
Identity = 63/86 (73.26%), Postives = 74/86 (86.05%), Query Frame = 0
Query:    1 MEHYRIMLAGCSVYFDRAVLLHRYPRLRLYVGHKTIELSSLLGIVRRWRPDLLRSLPPTQECHRALIDVMEAVSLLRWFWRSFLVG 86
            + H+R+MLAGCSVYFDRAVLLH YPRLR  +GHKTIELSSLL I R+WRPD+L +LPP Q+ HRALIDV+E+VSLLRWFWR  +V 
Sbjct:  153 ISHFRVMLAGCSVYFDRAVLLHIYPRLRNLIGHKTIELSSLLEIARKWRPDILATLPPAQDAHRALIDVLESVSLLRWFWRFIVVA 238          
BLAST of jgi.p|Trimin1|179627 vs. uniprot
Match: A0A836CDV0_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDV0_9STRA)

HSP 1 Score: 112 bits (281), Expect = 9.840e-29
Identity = 49/75 (65.33%), Postives = 61/75 (81.33%), Query Frame = 0
Query:    4 YRIMLAGCSVYFDRAVLLHRYPRLRLYVGHKTIELSSLLGIVRRWRPDLLRSLPPTQECHRALIDVMEAVSLLRW 78
            YR+M AGCS YFDR V+L+R+P LR Y+ HKTI+++S+L I RRWRPDLLRSLP  Q  HRAL DV+E++ LLRW
Sbjct:  186 YRVMFAGCSCYFDRGVILNRFPNLRKYIAHKTIDVTSVLEITRRWRPDLLRSLPAPQGTHRALPDVLESICLLRW 260          
BLAST of jgi.p|Trimin1|179627 vs. uniprot
Match: A0A835YX31_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX31_9STRA)

HSP 1 Score: 107 bits (267), Expect = 1.480e-26
Identity = 48/75 (64.00%), Postives = 58/75 (77.33%), Query Frame = 0
Query:    4 YRIMLAGCSVYFDRAVLLHRYPRLRLYVGHKTIELSSLLGIVRRWRPDLLRSLPPTQECHRALIDVMEAVSLLRW 78
            +R+M AGCS YFDR  +L R+P LR YV HKTI+++S+L I RRWRPDLLR LP  Q  HRAL DV+E+V LLRW
Sbjct:  197 FRVMFAGCSCYFDRGAILARFPNLRKYVAHKTIDVTSVLEITRRWRPDLLRCLPAPQGVHRALPDVLESVCLLRW 271          
BLAST of jgi.p|Trimin1|179627 vs. uniprot
Match: D8LPG5_ECTSI (EsV-1-139 n=2 Tax=root TaxID=1 RepID=D8LPG5_ECTSI)

HSP 1 Score: 77.8 bits (190), Expect = 2.510e-15
Identity = 33/82 (40.24%), Postives = 56/82 (68.29%), Query Frame = 0
Query:    5 RIMLAGCSVYFDRAVLLHRYPRLRLYVGHKTIELSSLLGIVRRWRPDLLRSLPPTQECHRALIDVMEAVSLLRWFWRSFLVG 86
            + +LAG +VYFDR  LL  +P L+ +  ++ +++S+ L +VRRWRPD+   LP     HRA  D+++++SL+++F  +FL G
Sbjct:  188 KCLLAGSTVYFDRIFLLKYFPCLKTFFHYRVVDVSTPLEMVRRWRPDVAAKLPRRNGSHRAYDDILDSISLMKFFKETFLNG 269          
BLAST of jgi.p|Trimin1|179627 vs. uniprot
Match: L0P9G8_PNEJ8 (Exonuclease domain-containing protein n=3 Tax=Pneumocystis TaxID=4753 RepID=L0P9G8_PNEJ8)

HSP 1 Score: 62.0 bits (149), Expect = 5.630e-10
Identity = 27/79 (34.18%), Postives = 51/79 (64.56%), Query Frame = 0
Query:    7 MLAGCSVYFDRAVLLHRYPRLRLYVGHKTIELSSLLGIVRRWRPDLLRSLPPTQECHRALIDVMEAVSLLRWFWRSFLV 85
            +LAG SVY DRA L    PR+  Y+ ++ I++S++  + RRW   + ++ P  +  HRA+ D+ E++  LR++ +++L+
Sbjct:   91 ILAGNSVYVDRAFLFRYIPRIVEYLHYRVIDVSTIKELARRWNYYVFQNAPKKKANHRAMDDIRESIEELRYYKKTWLI 169          
BLAST of jgi.p|Trimin1|179627 vs. uniprot
Match: A0A3D0Q0G0_9BIFI (Oligoribonuclease n=27 Tax=root TaxID=1 RepID=A0A3D0Q0G0_9BIFI)

HSP 1 Score: 62.8 bits (151), Expect = 5.880e-10
Identity = 28/78 (35.90%), Postives = 50/78 (64.10%), Query Frame = 0
Query:    7 MLAGCSVYFDRAVLLHRYPRLRLYVGHKTIELSSLLGIVRRWRPDLLRSLPPTQECHRALIDVMEAVSLLRWFWRSFL 84
            +LAG ++  D+  L H  P L   + ++TI++S+L  + RRW PD+  + PP    HRAL D++E++  LR++ ++F+
Sbjct:  113 LLAGNTIGSDKKFLDHYMPELMKNLHYRTIDVSTLKELARRWYPDVYLNRPPKNGGHRALADIIESLDELRYYRKAFM 190          
BLAST of jgi.p|Trimin1|179627 vs. uniprot
Match: A0A6I9WED9_9HYME (probable oligoribonuclease isoform X1 n=2 Tax=Pogonomyrmex barbatus TaxID=144034 RepID=A0A6I9WED9_9HYME)

HSP 1 Score: 62.0 bits (149), Expect = 7.110e-10
Identity = 27/74 (36.49%), Postives = 48/74 (64.86%), Query Frame = 0
Query:    8 LAGCSVYFDRAVLLHRYPRLRLYVGHKTIELSSLLGIVRRWRPDLLRSLPPTQECHRALIDVMEAVSLLRWFWR 81
            LAG +VY DR  L    P +  Y+ ++ I++S++  +V+RW PD+ +S+P  +  HRAL D+ E++  L+++ R
Sbjct:  105 LAGNTVYMDRLFLYKYMPSVNNYLHYRIIDVSTVKELVKRWNPDVYKSIPRKRLRHRALDDIRESIDELKYYKR 178          
BLAST of jgi.p|Trimin1|179627 vs. uniprot
Match: A0A0N4V273_ENTVE (Exonuclease domain-containing protein n=1 Tax=Enterobius vermicularis TaxID=51028 RepID=A0A0N4V273_ENTVE)

HSP 1 Score: 62.0 bits (149), Expect = 8.170e-10
Identity = 27/78 (34.62%), Postives = 47/78 (60.26%), Query Frame = 0
Query:    8 LAGCSVYFDRAVLLHRYPRLRLYVGHKTIELSSLLGIVRRWRPDLLRSLPPTQECHRALIDVMEAVSLLRWFWRSFLV 85
            LAG SV  DR  +    P+L  ++ ++T+++SS+  I +RW P+   S+P  +E H AL D+ E++  L+W+  +  V
Sbjct:  115 LAGNSVSVDRQFIKKYMPKLARHLHYRTVDVSSVKEIAKRWYPEKFASMPQKKEAHLALSDIKESIEELKWYRANIFV 192          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|179627 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z6J6_9STRA1.210e-59100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZEI1_9STRA2.090e-5393.10Ribonuclease H-like domain-containing protein n=2 ... [more]
A0A835Z4U2_9STRA1.310e-4073.26Ribonuclease H-like domain-containing protein n=1 ... [more]
A0A836CDV0_9STRA9.840e-2965.33Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
A0A835YX31_9STRA1.480e-2664.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LPG5_ECTSI2.510e-1540.24EsV-1-139 n=2 Tax=root TaxID=1 RepID=D8LPG5_ECTSI[more]
L0P9G8_PNEJ85.630e-1034.18Exonuclease domain-containing protein n=3 Tax=Pneu... [more]
A0A3D0Q0G0_9BIFI5.880e-1035.90Oligoribonuclease n=27 Tax=root TaxID=1 RepID=A0A3... [more]
A0A6I9WED9_9HYME7.110e-1036.49probable oligoribonuclease isoform X1 n=2 Tax=Pogo... [more]
A0A0N4V273_ENTVE8.170e-1034.62Exonuclease domain-containing protein n=1 Tax=Ente... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 1..85
e-value: 1.7E-15
score: 58.9
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 7..81

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_197contigContig_197:50578..50841 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|179627mRNA_16423Tribonema minus UTEX_B_3156 mRNAContig_197 50578..50841 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|179627|e_gw1.197.16.1 ID=Trimin1|179627|e_gw1.197.16.1|Name=jgi.p|Trimin1|179627|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=88bp
MEHYRIMLAGCSVYFDRAVLLHRYPRLRLYVGHKTIELSSLLGIVRRWRP
DLLRSLPPTQECHRALIDVMEAVSLLRWFWRSFLVGV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR012337RNaseH-like_sf