mRNA_17472 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|179453
Unique NamemRNA_17472
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
[Close]
BLAST of jgi.p|Trimin1|179453 vs. uniprot
Match: A0A835Z596_9STRA (Hypoxanthine phosphoribosyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z596_9STRA)

HSP 1 Score: 523 bits (1346), Expect = 1.470e-187
Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 1 
Query:    1 MITASDARSFEGNSNVVAWQAGTDCLKPDVCAVAALQDDHSYRLADLLIPNHYNGTLQEVLVPGGLIQDRVRKLARDIRADYGCTTIHLVCVLKGGSAFFQDLLRCLRYFHEFNDESYVPFTYDFIRVKSYVGTQSMDVKITGGDLKRMAGKHVLLVEDIIDTGKSMRALLPVLRKEGPKSLKVASLLEKRTERSCGFKAHYVGFSIPDKFVVGYCIDYDEHFRDMTHLCVVNQEGIERYRSISAAEEHAAMAAVGDSAA 780
            MITASDARSFEGNSNVVAWQAGTDCLKPDVCAVAALQDDHSYRLADLLIPNHYNGTLQEVLVPGGLIQDRVRKLARDIRADYGCTTIHLVCVLKGGSAFFQDLLRCLRYFHEFNDESYVPFTYDFIRVKSYVGTQSMDVKITGGDLKRMAGKHVLLVEDIIDTGKSMRALLPVLRKEGPKSLKVASLLEKRTERSCGFKAHYVGFSIPDKFVVGYCIDYDEHFRDMTHLCVVNQEGIERYRSISAAEEHAAMAAVGDSAA
Sbjct:    1 MITASDARSFEGNSNVVAWQAGTDCLKPDVCAVAALQDDHSYRLADLLIPNHYNGTLQEVLVPGGLIQDRVRKLARDIRADYGCTTIHLVCVLKGGSAFFQDLLRCLRYFHEFNDESYVPFTYDFIRVKSYVGTQSMDVKITGGDLKRMAGKHVLLVEDIIDTGKSMRALLPVLRKEGPKSLKVASLLEKRTERSCGFKAHYVGFSIPDKFVVGYCIDYDEHFRDMTHLCVVNQEGIERYRSISAAEEHAAMAAVGDSAA 260
[Close]
BLAST of jgi.p|Trimin1|179453 vs. uniprot
Match: D7FQD8_ECTSI (Hypoxanthine phosphoribosyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQD8_ECTSI)

HSP 1 Score: 263 bits (672), Expect = 2.820e-85
Identity = 126/204 (61.76%), Postives = 160/204 (78.43%), Query Frame = 1 
Query:  112 DDHSYRLADLLIPNHYNGTLQEVLVPGGLIQDRVRKLARDIRADYGCTTIHLVCVLKGGSAFFQDLLRCLRYFHEFNDESYVPFTYDFIRVKSYVGTQSM-DVKITGGDLKRMAGKHVLLVEDIIDTGKSMRALLPVLRKEGPKSLKVASLLEKRTERSCGFKAHYVGFSIPDKFVVGYCIDYDEHFRDMTHLCVVNQEGIERY 720
            D  S+ L    +P+HY G ++E+++P GL+ DR++KLA+DIR DY  TTIHL+CVLKGGSA+FQDL+  LR FH+  D SYVPFT+DFI+VKSY G  S   V+ITGGDL  + GK+VL+VEDIIDTG +M +LLPVL   G  S++V SLLEKRTE S GF+ HYVGFSIPDKFVVGYC+D++E FRDM H+CV++  GIER+
Sbjct:   31 DQLSFPLDMFSVPHHYKGDVKEIMIPHGLVIDRIQKLAKDIRHDYADTTIHLLCVLKGGSAYFQDLITALRRFHDHADHSYVPFTFDFIKVKSYKGVSSTGSVQITGGDLAALEGKNVLVVEDIIDTGLTMESLLPVLEARGANSVRVTSLLEKRTELSSGFRGHYVGFSIPDKFVVGYCLDFNEFFRDMDHICVISDRGIERF 234
[Close]
BLAST of jgi.p|Trimin1|179453 vs. uniprot
Match: A0A3R7KGI1_9STRA (Hypoxanthine phosphoribosyltransferase n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7KGI1_9STRA)

HSP 1 Score: 259 bits (662), Expect = 5.440e-84
Identity = 126/213 (59.15%), Postives = 165/213 (77.46%), Query Frame = 1 
Query:   97 VAALQDDHSYRLADLLIPNHYNGTLQEVLVPGGLIQDRVRKLARDIRADYGCTTIHLVCVLKGGSAFFQDLLRCLRYFHEFNDESYVPFTYDFIRVKSYVGTQSM-DVKITGGDLKRMAGKHVLLVEDIIDTGKSMRALLPVLRKEGPKSLKVASLLEKRTERSCGFKAHYVGFSIPDKFVVGYCIDYDEHFRDMTHLCVVNQEGIERYRSIS 732
            V  L+D+  Y  A  L+P+HY  +L+ VL+P G+I DRV KLA+DIR  Y   T+HL+CVLKGGSAFF DL+  LR FH++N   YVPFT+DFIRVKSY GT+S  +V+++G DL +  GK +LLVEDIIDTG++M  L+P+LR+  P S++VASLLEKR  +SCGFKA +VGF+IPDKFVVGYC+DYDE FRD+ H+CV+N+ GI +Y + S
Sbjct:   10 VIYLEDNAMYDKAQFLVPHHYLDSLESVLIPNGMIMDRVEKLAQDIRYAYEGKTVHLLCVLKGGSAFFHDLVEKLRLFHKYNKCDYVPFTFDFIRVKSYDGTKSTGNVQVSGADLAKFKGKDLLLVEDIIDTGRTMSKLVPMLREYDPASVRVASLLEKRNPQSCGFKADFVGFNIPDKFVVGYCLDYDEIFRDLDHICVINEAGIAKYAASS 222
[Close]
BLAST of jgi.p|Trimin1|179453 vs. uniprot
Match: A0A2D4BRV0_PYTIN (Hypoxanthine phosphoribosyltransferase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BRV0_PYTIN)

HSP 1 Score: 258 bits (658), Expect = 1.860e-83
Identity = 127/206 (61.65%), Postives = 161/206 (78.16%), Query Frame = 1 
Query:  106 LQDDHSYRLADLLIPNHYNGTLQEVLVPGGLIQDRVRKLARDIRADYGCTTIHLVCVLKGGSAFFQDLLRCLRYFHEFNDESYVPFTYDFIRVKSYVGTQSM-DVKITGGDLKRMAGKHVLLVEDIIDTGKSMRALLPVLRKEGPKSLKVASLLEKRTERSCGFKAHYVGFSIPDKFVVGYCIDYDEHFRDMTHLCVVNQEGIERY 720
            L DD ++  +  LIP+HY   L  VL+P GLIQDRV K+A+DIR DY   TIHL+CVLKGGSAFF DL+  LR FH++N  SYVPFT+DFI+VKSY GTQS  +V+I+G DL +  GK +LLVEDIIDTGK+M  L+P L++  P S++VASLLEKR  +SCGF+A YVGF IPDKFVVGYC+DY+E FRD+ H+CV+++ GI +Y
Sbjct:   10 LSDDATFDKSHFLIPHHYKDDLASVLIPTGLIQDRVEKIAQDIRYDYEGKTIHLLCVLKGGSAFFHDLVEKLRLFHKYNKCSYVPFTFDFIKVKSYEGTQSTGNVQISGADLAKFKGKDLLLVEDIIDTGKTMSKLVPYLQQFEPASVRVASLLEKRNPQSCGFQADYVGFQIPDKFVVGYCLDYNEVFRDLDHICVISEPGIAKY 215
[Close]
BLAST of jgi.p|Trimin1|179453 vs. uniprot
Match: A0A7S2V4H8_9STRA (Hypoxanthine phosphoribosyltransferase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4H8_9STRA)

HSP 1 Score: 255 bits (652), Expect = 5.150e-82
Identity = 124/220 (56.36%), Postives = 168/220 (76.36%), Query Frame = 1 
Query:  106 LQDDHSYRLADLLIPNHYNGTLQEVL-------------VPGGLIQDRVRKLARDIRADYGCTTIHLVCVLKGGSAFFQDLLRCLRYFHEFNDESYVPFTYDFIRVKSYVGTQSM-DVKITGGDLKRMAGKHVLLVEDIIDTGKSMRALLPVLRKEGPKSLKVASLLEKRTERSCGFKAHYVGFSIPDKFVVGYCIDYDEHFRDMTHLCVVNQEGIERYR 723
            +Q++ + R   ++IP+++   L ++              +P GL+QDR+ KLA DIR  Y   T+H++CVLKGGS FF DLLR LR FH+FND+SYVPFT+DFIRVKSY GT+S  +V+I+GGD+ R+ G+HVLLVEDIIDTG +M+ L+P ++  G  S++VASLLEKRTERSCGFKA +VGFSIPDKFVVGYC+DY+E +RD+ H+ V+NQ GIE+++
Sbjct:   34 IQNESAERKEPVMIPDNFEFGLDDMXXXXXXXXXXXXXXIPHGLVQDRIDKLAHDIRKTYSNITVHMLCVLKGGSIFFSDLLRALRTFHDFNDQSYVPFTFDFIRVKSYEGTESTGNVQISGGDVSRLQGRHVLLVEDIIDTGLTMQKLVPAMKAHGLASVRVASLLEKRTERSCGFKADFVGFSIPDKFVVGYCMDYNEWYRDLRHIAVINQAGIEKFK 253
[Close]
BLAST of jgi.p|Trimin1|179453 vs. uniprot
Match: M4BXR6_HYAAE (Hypoxanthine phosphoribosyltransferase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BXR6_HYAAE)

HSP 1 Score: 253 bits (646), Expect = 1.360e-81
Identity = 122/209 (58.37%), Postives = 160/209 (76.56%), Query Frame = 1 
Query:   97 VAALQDDHSYRLADLLIPNHYNGTLQEVLVPGGLIQDRVRKLARDIRADYGCTTIHLVCVLKGGSAFFQDLLRCLRYFHEFNDESYVPFTYDFIRVKSYVGTQSM-DVKITGGDLKRMAGKHVLLVEDIIDTGKSMRALLPVLRKEGPKSLKVASLLEKRTERSCGFKAHYVGFSIPDKFVVGYCIDYDEHFRDMTHLCVVNQEGIERY 720
            V  L+DD +Y  +  L+P HY  +++ VL+P GLI+DRV KLA+DIR  Y   T+HL+CVLKGGSAFF  L+  LR FH++N   YVPFT+DFI+VKSY G +S  DV+++G DL +  GKH+LLVEDIIDTGK+M  L+P+L    P S++VASLLEKR   SCGFKA +VGFSIPDKFV+GYC+DY+E FRD+ H+CV+++ GI +Y
Sbjct:   10 VIYLKDDATYDKSQFLVPQHYLDSVESVLIPRGLIEDRVEKLAQDIRYTYKGETVHLLCVLKGGSAFFHALVEKLRLFHKYNQCDYVPFTFDFIKVKSYEGLKSSGDVQVSGADLAKFKGKHLLLVEDIIDTGKTMTKLVPLLSGYEPTSVRVASLLEKRNPESCGFKADFVGFSIPDKFVIGYCLDYNETFRDLDHICVISEAGIAKY 218
[Close]
BLAST of jgi.p|Trimin1|179453 vs. uniprot
Match: A0A8K1C8V1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C8V1_PYTOL)

HSP 1 Score: 250 bits (639), Expect = 1.520e-80
Identity = 123/210 (58.57%), Postives = 158/210 (75.24%), Query Frame = 1 
Query:  106 LQDDHSYRLADLLIPNHYNGTLQEVLVPGGLIQDRVRKLARDIRADYGCTTIHLVCVLKGGSAFFQDLLRCLRYFHEFNDESYVPFTYDFIRVKSYVGTQSM-DVKITGGDLKRMAGKHVLLVEDIIDTGKSMRALLPVLRKEGPKSLKVASLLEKRTERSCGFKAHYVGFSIPDKFVVGYCIDYDEHFRDMTHLCVVNQEGIERYRSIS 732
            L DD +Y     L+P+HY   +  VL+P GLIQDRV KLA+DIR  Y   TIHL+CVLKGGSAFF +L+  LR FH++N   YVPFT+DFI+VKSY GTQS  +V+I+G D  +  GK +LLVEDIIDTGK+M  L+P L++  P S++VASLLEKR   SCGF+  +VGFSIPDKFV+GYC+DY+E FRD+ H+CV+++ GI +Y S S
Sbjct:   12 LADDAAYDKKHFLVPHHYEQDIDSVLIPAGLIQDRVEKLAQDIRYAYEGKTIHLLCVLKGGSAFFHNLVEKLRLFHKYNKCDYVPFTFDFIKVKSYEGTQSTGNVQISGADASKFKGKDLLLVEDIIDTGKTMAKLIPYLQQYEPASVRVASLLEKRNPASCGFQGDFVGFSIPDKFVIGYCLDYNEMFRDLDHICVISETGIAKYASHS 221
[Close]
BLAST of jgi.p|Trimin1|179453 vs. uniprot
Match: A0A3M6VNV8_9STRA (Hypoxanthine phosphoribosyltransferase n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VNV8_9STRA)

HSP 1 Score: 250 bits (638), Expect = 2.230e-80
Identity = 123/217 (56.68%), Postives = 164/217 (75.58%), Query Frame = 1 
Query:   85 DVCAVAALQDDHSYRLADLLIPNHYNGTLQEVLVPGGLIQDRVRKLARDIRADYGCTTIHLVCVLKGGSAFFQDLLRCLRYFHEFNDESYVPFTYDFIRVKSYVGTQSM-DVKITGGDLKRMAGKHVLLVEDIIDTGKSMRALLPVLRKEGPKSLKVASLLEKRTERSCGFKAHYVGFSIPDKFVVGYCIDYDEHFRDMTHLCVVNQEGIERYRSIS 732
            D   V  L+DD  Y  +  L+P+HY  +++ VL+P GLI+DRV KLA+DIR  Y   T+HL+CVLKGGSAFF  L+  LR FH++N   YVPFT+DFI+VKSY GT+S  +V+I+G DL +   K++LLVEDIIDTGK+M  L+P+L +  P+S++VASLLEKR   SCGF+A +VGF+IPDKFV+GYC+DY+E FRD+ H+CV+N  GI +Y S S
Sbjct:    6 DFKRVIYLEDDVFYDKSQFLVPHHYLDSIESVLIPKGLIEDRVEKLAQDIRYAYEGKTVHLLCVLKGGSAFFNALVDKLRLFHKYNKCDYVPFTFDFIKVKSYAGTKSTGNVEISGADLSKFKEKNLLLVEDIIDTGKTMAKLIPLLNEYEPESVRVASLLEKRNPESCGFQADFVGFNIPDKFVIGYCLDYNEIFRDLDHICVINDAGIVKYASSS 222
[Close]
BLAST of jgi.p|Trimin1|179453 vs. uniprot
Match: H3GHL0_PHYRM (Hypoxanthine phosphoribosyltransferase n=18 Tax=Phytophthora TaxID=4783 RepID=H3GHL0_PHYRM)

HSP 1 Score: 249 bits (636), Expect = 4.480e-80
Identity = 121/213 (56.81%), Postives = 164/213 (77.00%), Query Frame = 1 
Query:   97 VAALQDDHSYRLADLLIPNHYNGTLQEVLVPGGLIQDRVRKLARDIRADYGCTTIHLVCVLKGGSAFFQDLLRCLRYFHEFNDESYVPFTYDFIRVKSYVGTQSM-DVKITGGDLKRMAGKHVLLVEDIIDTGKSMRALLPVLRKEGPKSLKVASLLEKRTERSCGFKAHYVGFSIPDKFVVGYCIDYDEHFRDMTHLCVVNQEGIERYRSIS 732
            V  L+DD +Y  A  L+P+HY  +++ VL+  GLI+DRV KLA+DIR  Y   T+HL+CVLKGGSAFF  L+  LR FH++N   YVPFT+DFI+VKSY GT+S  +V+++G DL +  GK +LLVEDIIDTGK+M  L+P+L +  P+S++VASLLEKR   SCGF+A +VGF+IPDKFV+G+C+DY+E FRD+ H+CV+N+ GI +Y S S
Sbjct:   10 VIYLEDDATYDKAQFLVPHHYLESIESVLISKGLIEDRVEKLAQDIRYAYEGKTVHLLCVLKGGSAFFHALVDKLRLFHKYNKCDYVPFTFDFIKVKSYAGTKSTGNVEVSGADLAKFKGKSLLLVEDIIDTGKTMSKLVPMLSEYEPESVRVASLLEKRNPESCGFQADFVGFNIPDKFVIGFCLDYNEVFRDLDHICVINEAGIAKYASSS 222
[Close]
BLAST of jgi.p|Trimin1|179453 vs. uniprot
Match: A0A484E739_BRELC (Hypoxanthine phosphoribosyltransferase n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E739_BRELC)

HSP 1 Score: 249 bits (635), Expect = 1.080e-79
Identity = 120/210 (57.14%), Postives = 163/210 (77.62%), Query Frame = 1 
Query:  106 LQDDHSYRLADLLIPNHYNGTLQEVLVPGGLIQDRVRKLARDIRADYGCTTIHLVCVLKGGSAFFQDLLRCLRYFHEFNDESYVPFTYDFIRVKSYVGTQSM-DVKITGGDLKRMAGKHVLLVEDIIDTGKSMRALLPVLRKEGPKSLKVASLLEKRTERSCGFKAHYVGFSIPDKFVVGYCIDYDEHFRDMTHLCVVNQEGIERYRSIS 732
            L+D+  Y  +  LIP+HY  +++ VL+P GLI DRV KLA DIR  Y   T+H++CVLKGGSAFF  L+  LR FH++N   YVPFT+DFIRVKSY GT+S  +V+I+G D+ ++ G+H+LLVEDIID+GK+M  L+P+L +  P S++VASLLEKR   SCGF+A +VGFSIP+KFV+GYC+DY++ FRD+ H+CV+N+EGI +Y S S
Sbjct:   29 LEDNAVYEKSQFLIPHHYVDSVESVLLPKGLIDDRVEKLAHDIRYAYEGQTVHVLCVLKGGSAFFHALVEKLRLFHKYNGCDYVPFTFDFIRVKSYEGTKSTGNVQISGIDMDKLKGRHLLLVEDIIDSGKTMTKLVPMLEQYAPASVRVASLLEKRNPASCGFRADFVGFSIPNKFVIGYCLDYNDIFRDLDHICVINEEGIAKYASSS 238
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|179453 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z596_9STRA1.470e-187100.00Hypoxanthine phosphoribosyltransferase n=1 Tax=Tri... [more]
D7FQD8_ECTSI2.820e-8561.76Hypoxanthine phosphoribosyltransferase n=1 Tax=Ect... [more]
A0A3R7KGI1_9STRA5.440e-8459.15Hypoxanthine phosphoribosyltransferase n=3 Tax=Phy... [more]
A0A2D4BRV0_PYTIN1.860e-8361.65Hypoxanthine phosphoribosyltransferase n=1 Tax=Pyt... [more]
A0A7S2V4H8_9STRA5.150e-8256.36Hypoxanthine phosphoribosyltransferase n=1 Tax=Fib... [more]
M4BXR6_HYAAE1.360e-8158.37Hypoxanthine phosphoribosyltransferase n=1 Tax=Hya... [more]
A0A8K1C8V1_PYTOL1.520e-8058.57Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A3M6VNV8_9STRA2.230e-8056.68Hypoxanthine phosphoribosyltransferase n=1 Tax=Per... [more]
H3GHL0_PHYRM4.480e-8056.81Hypoxanthine phosphoribosyltransferase n=18 Tax=Ph... [more]
A0A484E739_BRELC1.080e-7957.14Hypoxanthine phosphoribosyltransferase n=1 Tax=Bre... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_194contigContig_194:169708..175716 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|179453|e_gw1.194.45.1
DescriptionHypoxanthine-guanine phosphoribosyltransferase. Source PGD
COG categoryF
Max annot lvl121069|Pythiales
EggNOG OGsCOG0634@1|root,KOG3367@2759|Eukaryota,1MBR8@121069|Pythiales
Evalue3.04e-86
Seed ortholog36331.EPrPI00000022242
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionPhosphoribosyltransferase-like
Ec32 orthologEc-01_006480.1
TranscriptId179775
TrackFilteredModels1
ProteinId179453
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|179453gene_17472Tribonema minus UTEX_B_3156 geneContig_194 169708..175716 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|179453Trimin1|179453|e_gw1.194.45.1Tribonema minus UTEX_B_3156 polypeptideContig_194 169708..175716 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_17472_7exon_17472_7Tribonema minus UTEX_B_3156 exonContig_194 169708..169861 -
exon_17472_6exon_17472_6Tribonema minus UTEX_B_3156 exonContig_194 171096..171107 -
exon_17472_5exon_17472_5Tribonema minus UTEX_B_3156 exonContig_194 172729..172855 -
exon_17472_4exon_17472_4Tribonema minus UTEX_B_3156 exonContig_194 174100..174334 -
exon_17472_3exon_17472_3Tribonema minus UTEX_B_3156 exonContig_194 174761..174787 -
exon_17472_2exon_17472_2Tribonema minus UTEX_B_3156 exonContig_194 175316..175364 -
exon_17472_1exon_17472_1Tribonema minus UTEX_B_3156 exonContig_194 175538..175716 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_17472CDS_17472Tribonema minus UTEX_B_3156 CDSContig_194 175538..175716 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_17472 ID=mRNA_17472|Name=jgi.p|Trimin1|179453|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=783bp|location=Sequence derived from alignment at Contig_194:169708..175716- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGATTACGGCAAGTGATGCACGCTCTTTTGAAGGCAACTCAAACGTCGT
TGCGTGGCAGGCTGGCACCGATTGTCTAAAGCCTGATGTTTGTGCTGTTG
CTGCACTGCAGGATGACCATTCCTACCGCTTGGCAGACCTGCTGATCCCC
AATCACTACAATGGGACGCTACAAGAGGTGCTTGTACCGGGCGGCCTGAT
CCAGGATAGAGTGCGAAAGCTAGCGCGGGACATACGGGCTGACTACGGGT
GCACGACAATCCACCTGGTGTGCGTGCTCAAGGGCGGGAGCGCGTTCTTT
CAGGACCTGCTGCGCTGCCTGCGCTACTTTCACGAGTTTAACGACGAGAG
CTATGTGCCTTTCACGTATGATTTCATCCGCGTGAAGAGCTATGTTGGGA
CGCAGAGCATGGACGTGAAAATCACGGGCGGGGATTTGAAGCGCATGGCG
GGGAAGCACGTGCTGCTGGTGGAGGACATCATAGATACAGGCAAGAGCAT
GCGAGCGCTGCTGCCGGTGCTGCGCAAGGAGGGTCCAAAGAGCCTAAAGG
TGGCGTCGCTGCTGGAGAAACGGACGGAGAGGAGCTGCGGTTTCAAGGCA
CACTACGTTGGGTTCAGCATTCCAGACAAGTTTGTCGTTGGCTACTGCAT
AGACTACGACGAGCACTTCAGGGACATGACGCACTTGTGTGTTGTCAATC
AGGAGGGCATTGAGCGCTACAGGAGCATCTCTGCCGCAGAGGAGCATGCC
GCGATGGCTGCTGTGGGTGACTCGGCCGCTTAG
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protein sequence of jgi.p|Trimin1|179453

>Trimin1|179453|e_gw1.194.45.1 ID=Trimin1|179453|e_gw1.194.45.1|Name=jgi.p|Trimin1|179453|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=261bp
MITASDARSFEGNSNVVAWQAGTDCLKPDVCAVAALQDDHSYRLADLLIP
NHYNGTLQEVLVPGGLIQDRVRKLARDIRADYGCTTIHLVCVLKGGSAFF
QDLLRCLRYFHEFNDESYVPFTYDFIRVKSYVGTQSMDVKITGGDLKRMA
GKHVLLVEDIIDTGKSMRALLPVLRKEGPKSLKVASLLEKRTERSCGFKA
HYVGFSIPDKFVVGYCIDYDEHFRDMTHLCVVNQEGIERYRSISAAEEHA
AMAAVGDSAA*
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mRNA from alignment at Contig_194:169708..175716-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_17472 ID=mRNA_17472|Name=jgi.p|Trimin1|179453|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=6009bp|location=Sequence derived from alignment at Contig_194:169708..175716- (Tribonema minus UTEX_B_3156 )
ATGATTACGGCAAGTGATGCACGCTCTTTTGAAGGCAACTCAAACGTCGT
TGCGTGGCAGGCTGGCACCGATTGTCTAAAGCCTGATGTTTGTGCTGTTG
CTGCACTGCAGGATGACCATTCCTACCGCTTGGCAGACCTGCTGATCCCC
AATCACTACAATGGGACGCTACAAGAGGTGTACGTATACCTCATGCGCAC
TGCATTGTGAGCCTGCATTGCACTAACACATGTTAGCCATCGATTGCGCA
AAAATGTTGATCGTCCTGTCGACACAGGAGCTGCTCTGAAAGCGCCAAGC
TCCGCTGATCGATTTCGATTATGCACTTGCTGCTTTTCTGATCGTGGCGC
AGGCTTGTACCGGGCGGCCTGATCCAGGATAGAGTGCGAAAGCTAGCGCG
GGTGAGGGATGATTGATGTACAATGCAGATGTTTGCTCTTGTCCTTATTT
GTGCTCCTGGATGTTACAATGGCATGGCACCCTTGACGAAGAAGCAAGCT
ACACAACAAAGTGTGCGCAGGCTGCTTAGCTCCTGCAGTAAGGCCAGAGA
GTCATCACAACATGAAATATAGTTTTCAGTGCTGGTCGCGCAAAGTCATA
TCCAAGTTTTCCAGTTTCACAACCACGCGCCAGCGCTTGCACATTTCTGC
ACGAACACGTGCGACGGCACATCATTGCGTGTGGCAGCTTGCCTGCACGT
GGAGCGCTGCTGCAAAGCTGAGCGCTGTCACATACAATGAAGCTCGTCCT
CTCATGGTAGCACCATCCAACACTTGAAACCTCCAGGCTACATTACCGTT
GAGTCTTTCATGGCGCATTGCCACGGTGAAATGTCATCTGCGCAACTTGA
GGTTTAAGAGGGCTGAAGCTCTGAGTGCTAATCCATGCGGTTCGGCTGCT
CTGCTCCTGTGCTGTTGATGCCTGCCTAGGACATACGGGCTGACTACGGG
TGCACGGTGAGCGCTGCTGTACTGCCACATCTGCAGTGCTCAGCAAAGTG
CTTAGGGTTACGGTTTGGGTTTAGGGTTAGGGCGAGGGTCTTGTTTAGGT
GCTGCTCAAGACGGTATTGCTCTGTTGCTTCGAGCCATGCATAACAGTGC
GCAAGTTGTAGACGCAGGGTGTACATGAGAATCTGAGCACGTGTGCATTG
CAAGCATAGTGCTTTCAAAGGGCATATATGCTGACAACGAGCTTGCAACG
CTGACACACCGCGCTTAATGATATGGGGCCTGCCTTTCTGTATTGATGTG
AGCTGAGCAGTGCATCAATAATCTCCTTCACGCGTTCGCCTGAGCAAAGC
AACATCGAGTGATCCCCCCCCCCCCCCCCCCCCTACCCCTCAGCCTAACC
CCACCCCTTACGCTACATGTAACCTCTTGCAGACAATCCACCTGGTGTGC
GTGCTCAAGGGCGGGAGCGCGTTCTTTCAGGACCTGCTGCGCTGCCTGCG
CTACTTTCACGAGTTTAACGACGAGAGCTATGTGCCTTTCACGTATGATT
TCATCCGCGTGAAGAGCTATGTTGGGACGCAGAGCATGGACGTGAAAATC
ACGGGCGGGGATTTGAAGCGCATGGCGGGGAAGCACGTGCTGCTGGTGGA
GGACATCATAGATACAGGTACAATACTTCAACTTGAAGTCGTAGTGAGTG
TGTGTGAGTGAACGCTTTGTGGTGTAAAAAGGTGCTGGCGGAGGACATCA
TAGACACAAGTACCGTACTTCAACTTGAGGCAGTAGTGGAGCGTGTGTGA
CTGAAAGCTGTGTTTTGACTAGTAGGTGGTGGTGGAGGACATCGTTGACA
CAGGTGCAATACTTCAACTTGAAAAAGTAACTGAGGGTGTGGTTGCTGAG
TGCTTCAAGAAGGTGCTGGTGGAGGACATCATCGACACAGGTGTGACACT
TCAAGTTGAAGCGCGAGGTGTGTGGGTGAGTGCGCTGTGGTTTGACTAGT
AGGCGTCGGTGGAGGAGTGGAGGACAGCTTTGACACAGGCGCGGTACTTC
AACTTGAAGACGTGGGGTGTGTGCGTGTACGCTGTGATTTGACTAGTAGG
TGCTGGTGGAGGACATCATTTAAAAAAAAAGTGTGACACTGCAACTTGCA
AGAAGTGTTGGAGCGTGTATAAGTGCTGCGTCAAGTGTTCCGACTGTTAA
AAAGAAGGTAATGGTGGAGGATCATCATTGACGCAGGTATGATACTTCAA
CTTGGAGATATGAGTTTTTGTACGGAGCGAAGGTTCGACTGAAAGGGCTG
ATGGATTGGCCCTCATCATCTACACGGGAGTGATACTTCAACTTGAAGAA
ATGGGGGAGAGTGCAGAGCGATGTTGAGTGGTGGAGGGCATTGCGTGTAT
GAAATCACATTTGTCGGCACAGGCTGGAATTGTTTACATTTGACACTTTG
TTTGAATCAAATGAATGTGAAACATGTAGTTTGGTACTCTCTCGCCATGT
CTACTCATTTCTGCCTCTGATGCAAGTTTCCGTTATACAGTCGTGGGGAT
GAGCTTTGTTGTTTTGGGGGTAGGCTAACCCTACCGCAACAGTTGTAAGC
GAACATTGCGCTGTCATCACGGACTGCTCGTGTGTTTGTGTTTGTAAGTG
ATCGCTGTTGCATGCACCATCTGAGGGCGAGCTGTGTGCTCTGCGTACGG
CAAGCAGATGCAACCTGCATGCGTTTGTTGCTCGCAAATCAAGGCAATGC
GGTGATACTGCTGCTGTTACGCTTTATGATGATTGTCACTCAAGTGTGCT
GAAGTCTCCATTCTGGCTGATAGGTGTGTTGGCAAGTCTCTTTGCCGTAT
GTTGCGCATACACATAGTCAACTTCCAATCAACTTTAAATTTATGTAACA
CCCATTTTCAGGCAAGAGCATGCGAGCGCTGCTGCCGGTGCTGCGCAAGG
AGGGTCCAAAGAGCCTAAAGGTGGCGTCGCTGCTGGAGAAACGGACGGAG
AGGAGCTGCGGTTTCAAGGCACACTACGTTGGGTTCAGGTATGCCGCCAA
ACCCTCAATTAATTACCCTCAACACTAGCCGTAGTCGTGGTTGTAACAGC
AAGGCAGCACCCGTCTCACTGCACCGCACAGCGCGTCATTGCATGATGTC
ACAGGTGTGGCCTTGGAGAGGAGCTACTGCACATTGAAAAGGATTTGGGT
GCATTCTGAACTCAACATTTGCCCTAACACCTGGGTAACTCACTGTATGG
CACATTATGTTGCTGTATAACGTCAAACACGTGTGGCCTTCGAAGGCAGC
CGCCGATTAAAGCCGCGGAAGTAAGGCACATTACAAGGGATCCGGGTGCA
GCATCAGCCCTCGCCCTAAAACTTGGGGAACTCACAGCACGGCGCAGCAT
GTTGTTGTATGATGTCATACACGTGTATTCATTGAGAGCAGCTCAGGGTA
CACGGTGCACTACGTTGGTTTTAGGTGTGCTGGTAGGCTAATTCACCCCT
AGCCCCAAGGGCAACCCCAGCGTGCTTTTACTACACGGCACAGCACGTCA
CTGCCTCTGTGGCGACAATGTCCTCTTGCATACAAAGCTGTGGCAGTATT
GCGCTTGACATTGAACTCTGTGTGTCGGTAAACTCCAATCCTAATCTTAA
GCCCTAGTCATACACCACCACCAGGCACCATTCTCACTGCATGGTACAAC
GCGTCATTGCATAATGTGCATTTTGCGGTGATGGCGACGTCAAGGCATTG
CTGCCAACAACCTGCGGCGGAAGGATATGTCCTGATGTAACTGATGTAGC
TGGCAGCTGCCACACTCGGTGGTGAAAAAAGTGCTGAGTGCAGATCCAGC
CGTGCGCGACTTGCCTTGTCTTACAGTAGATTGAAGTGGACGCTTTAGTG
GAACTCGCGGTTGCACACGTACAGTTTATGCACATACTGCTCCAGTAGGC
GGCACAAACCTCATCAGATGAGCAGCGGGTAATGCTAGTTGAAGTTACTG
GCTCTTTGAAGTCGATCCGTGAGGTTGCGACACTCACTCGGTGCATCAAC
CTCCCATGACATCGTGGTCTGAAGCTGGCAAGGACGTTCTTTGAGTGCTG
CACTCCACCAGTAATACTACCAGCATCTGTTTGAGAAACACACAAGCTTT
GGACACTTAGTGTAATCGGTTCGTCAGTGGAGCTCCGTCAAGCACCTCAG
CAAAGGCTCTTGCCAACAGAGTGCGTCTCGGCGACGTCTTTGACTTTGAG
TCAATTTTACAGGCCCTCTGACTTCAAGTTGAAGTTTCAGTTGAGAGCCT
GTAAGTATAGATTTACTGAGCACTGCTTGAGAGCATGGCGTGTGCATCAC
ACCCCTGCGAGATGTCAACAAACACGATGCACATCAACTCACTGCCAACG
TGGGTTGGATGTGAAGTGTGAAAAGCTCAGGGTGTCACACGTAAACTTAG
GTTGAGAGTGGACTCACGTTCAGGGTCACCTATTGCTAGAAAGGGTGCAC
TCGTTGCGCTGTTCAGACCTGAACTTGTTTTTGGAGTACATATGCTGTGC
ATTTCTTGGACTGACGGTATGCATCTTCCTGCTGACAATCTCTGCGGTGC
TGCTGCTGGACTGATGACTGATGGCGCTGCGTTCGTGATGGCGGCGATGG
CCTGCGCAGCATTCCAGACAAGTAAGTGGCTCATTCATTGTTGCGACATA
CATGATGAGTGAACCTCAAACAGTCACATTGAACTTGACGTTGCCACAGG
TGCTGCTGGCTCGACAAATGCGAAGTACGACAGTAGCTGCTGCAGGAGCA
CTGCTAAGCGTGCTGCCTCTGCTGCACTTCAGACAGCATTGCTGTGATGC
AACAGCGCACATAATTTCTACCTCACAAGTGCGTTGCACCAAACAAATTT
TGACTCTGGGACAAGTTCAGAACCCATAAATGCTGTTTGATAAACACAAG
TCGCACACTACGTATGATCCCAACCGGTAATTGTGGGTACTTCAAAGTGT
CAGTTATGCAACATGGAAGCAAGGGCTATAGAGTGCTTCTACAGAGTAAT
TTGATTTGAGAGTGTGTAGACATATTGCACTTCTCGGCCACCTTCTTGCG
TTCATGTGCGGAATTTGGTGTTATTATGGTCCGCCTTCTGCTCACGTGCA
AGGACAAGCTGCCGATAGTATTGTGTCCTGCTCTTGTCGTCAATGTCGCT
GTATGAGCGCGACCTGCTGTGTATATGCTACGTACATGTACATGACGTAC
TCCTGTGCTCTGCAGCGCAAGTTAGTTTGCGTGGGTCTGCTGTGCCGCGA
AGCTGTGTTTCGATTGTCGAAGCATGGCCGTGCAGAGATACGACTCACGT
TACAGAGTAGACGGCAAGGCTTTCTGTTGCTGAGCAGTCATCAGGTGCAA
TTTGAAGTACATTTGGTGCCACACATGGCCTCCTGTTGACTATTGCCATG
TATGGTGGACTTGAATCGGTGGACATGAAGCGTTGTTGACAGTGAGCACA
TCTACAAGGGTTAGGGTTGGGTATAGCTTTTTTATCCCGTGTAGGGCAGC
ACCAGTGCACTGCACTGCGACCTCAGGGTTAGGTTTCGGGTTGCTGCTGT
GCTTACATCCAATAACCTGCGAGCACTTCTTTGTGGGGTCATTTTCAGGG
TGACAGTAATCTATCACGAGGAACTGTGCTGTGCAGCTGCTGTTCTCGCC
GTTGGTCTAGAACAGCTGCTGTCGATTGCTCAGCTTTGCAACTTCAAGGT
GCTGTGCAACCTTTAACAATTTTTGTGCTCTATGTGGAGTCGTTTGTTTT
CAGGCTTTGTATAAACAGCGCTGTGTTGTGCACTGCTTTCCTGGTATGTC
GACTTTGACTGACTGCACTGCAATAACCTGCTGCTGGTGCTTTTGTCGCT
GCTAGGTTTGTCGTTGGCTACTGCATAGACTACGACGAGCACTTCAGGGA
CATGACGCACTTGTGTGTTGTCAATCAGGAGGGCATTGAGCGCTACAGGA
GCATCTCTGCCGCAGAGGAGCATGCCGCGATGGCTGCTGTGGGTGACTCG
GCCGCTTAG
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Coding sequence (CDS) from alignment at Contig_194:169708..175716-

>mRNA_17472 ID=mRNA_17472|Name=jgi.p|Trimin1|179453|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=783bp|location=Sequence derived from alignment at Contig_194:169708..175716- (Tribonema minus UTEX_B_3156 )
ATGATTACGGCAAGTGATGCACGCTCTTTTGAAGGCAACTCAAACGTCGT
TGCGTGGCAGGCTGGCACCGATTGTCTAAAGCCTGATGTTTGTGCTGTTG
CTGCACTGCAGGATGACCATTCCTACCGCTTGGCAGACCTGCTGATCCCC
AATCACTACAATGGGACGCTACAAGAGGTGCTTGTACCGGGCGGCCTGAT
CCAGGATAGAGTGCGAAAGCTAGCGCGGGACATACGGGCTGACTACGGGT
GCACGACAATCCACCTGGTGTGCGTGCTCAAGGGCGGGAGCGCGTTCTTT
CAGGACCTGCTGCGCTGCCTGCGCTACTTTCACGAGTTTAACGACGAGAG
CTATGTGCCTTTCACGTATGATTTCATCCGCGTGAAGAGCTATGTTGGGA
CGCAGAGCATGGACGTGAAAATCACGGGCGGGGATTTGAAGCGCATGGCG
GGGAAGCACGTGCTGCTGGTGGAGGACATCATAGATACAGGCAAGAGCAT
GCGAGCGCTGCTGCCGGTGCTGCGCAAGGAGGGTCCAAAGAGCCTAAAGG
TGGCGTCGCTGCTGGAGAAACGGACGGAGAGGAGCTGCGGTTTCAAGGCA
CACTACGTTGGGTTCAGCATTCCAGACAAGTTTGTCGTTGGCTACTGCAT
AGACTACGACGAGCACTTCAGGGACATGACGCACTTGTGTGTTGTCAATC
AGGAGGGCATTGAGCGCTACAGGAGCATCTCTGCCGCAGAGGAGCATGCC
GCGATGGCTGCTGTGGGTGACTCGGCCGCTTAG
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