Trimin1|133924|gw1.190.14.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|133924
Unique NameTrimin1|133924|gw1.190.14.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length114
Homology
BLAST of jgi.p|Trimin1|133924 vs. uniprot
Match: A0A836CI28_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI28_9STRA)

HSP 1 Score: 236 bits (602), Expect = 6.050e-79
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0
Query:    1 LPIWWCPWIHDLAVMVGCLKHGLLNVNAMRTDASLPLTPASVSHHIMRSLVTPVAGGRMSISGLGSARGGRGGASLTQEDTTAWVAQLSCQFPSRRALENRVFAICVLLTQHLP 114
            LPIWWCPWIHDLAVMVGCLKHGLLNVNAMRTDASLPLTPASVSHHIMRSLVTPVAGGRMSISGLGSARGGRGGASLTQEDTTAWVAQLSCQFPSRRALENRVFAICVLLTQHLP
Sbjct:    1 LPIWWCPWIHDLAVMVGCLKHGLLNVNAMRTDASLPLTPASVSHHIMRSLVTPVAGGRMSISGLGSARGGRGGASLTQEDTTAWVAQLSCQFPSRRALENRVFAICVLLTQHLP 114          
BLAST of jgi.p|Trimin1|133924 vs. uniprot
Match: A0A6H5KVU7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVU7_9PHAE)

HSP 1 Score: 87.8 bits (216), Expect = 7.370e-18
Identity = 33/54 (61.11%), Postives = 44/54 (81.48%), Query Frame = 0
Query:    1 LPIWWCPWIHDLAVMVGCLKHGLLNVNAMRTDASLPLTPASVSHHIMRSLVTPV 54
            LP+WWCPWIHDL +M GC++HG +N+NAMR D++LPL P +V+ HI R+LV  V
Sbjct: 2492 LPLWWCPWIHDLGLMAGCVRHGFMNINAMRGDSALPLNPGAVNDHITRALVVGV 2545          
BLAST of jgi.p|Trimin1|133924 vs. uniprot
Match: D8LDU9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDU9_ECTSI)

HSP 1 Score: 87.4 bits (215), Expect = 1.010e-17
Identity = 33/54 (61.11%), Postives = 44/54 (81.48%), Query Frame = 0
Query:    1 LPIWWCPWIHDLAVMVGCLKHGLLNVNAMRTDASLPLTPASVSHHIMRSLVTPV 54
            LP+WWCPWIHDL +M GC++HG +N+NAMR D++LPL P +V+ HI R+LV  V
Sbjct: 2456 LPMWWCPWIHDLGLMAGCVRHGFMNINAMRGDSALPLNPGAVNDHITRALVVGV 2509          
BLAST of jgi.p|Trimin1|133924 vs. uniprot
Match: A0A7S4D9Z2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D9Z2_HETAK)

HSP 1 Score: 83.2 bits (204), Expect = 2.440e-16
Identity = 41/111 (36.94%), Postives = 63/111 (56.76%), Query Frame = 0
Query:    1 LPIWWCPWIHDLAVMVGCLKHGLLNVNAMRTDASLPLTPASVSHHIMRSLVTPVAGGRMSISGLGSARGGRGGASLTQEDTTAWVAQLSCQFPSRRALENRVFAICVLLTQ 111
            +P WWCPWIHD A+++GCLKHG L +N +R+D +LPL    +  H++ S  T +  G M+     S +  +     + ED    +     QFPS+  L+ R+  IC+ LT+
Sbjct:  270 VPFWWCPWIHDYALVLGCLKHGYLCLNLIRSDKTLPLNQEKIQKHVLLSFSTKL--GEMAAVQFPSQQTAK-----SAEDERLLLQLAISQFPSKETLDQRMKRICLELTR 373          
BLAST of jgi.p|Trimin1|133924 vs. uniprot
Match: A0A1V9ZZP1_9STRA (Chromodomain-helicase-DNA-binding protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZZP1_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 1.190e-11
Identity = 38/114 (33.33%), Postives = 60/114 (52.63%), Query Frame = 0
Query:    1 LPIWWCPWIHDLAVMVGCLKHGLLNVNAMRTDASLPLTPASVSHHIMRSLVTPVAGGRMSISGLGSARGGRGGASLTQEDTTAWVAQLSCQFPSRRALENRVFAICVLLTQHLP 114
            +P WWCPWIHDLA++ G L+ G+ ++  ++      L   +V  H+ +  V          SG+ +A G     SL  ++   W+    C FP+ + LE RV  +C+LLT+ LP
Sbjct: 2110 MPAWWCPWIHDLALIQGMLRFGIGDM--LQVHHFGDLHTLTVVDHVYKVFVE---------SGVLNANG----ISLNTQELAQWIQITCCTFPTMQLLEQRVMRLCLLLTEQLP 2208          
BLAST of jgi.p|Trimin1|133924 vs. uniprot
Match: A0A7S2GE25_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GE25_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 2.890e-11
Identity = 25/48 (52.08%), Postives = 35/48 (72.92%), Query Frame = 0
Query:    1 LPIWWCPWIHDLAVMVGCLKHGLLNVNAMRTDASLPLTPASVSHHIMR 48
            +P+WWCPW+HDLA++VG + HGLL V+ +R D  LP   A+V  H+ R
Sbjct:  585 MPVWWCPWVHDLALLVGAVHHGLLQVDLLRGDPILPTERATVQRHVRR 632          
BLAST of jgi.p|Trimin1|133924 vs. uniprot
Match: A0A485KXH5_9STRA (Aste57867_12909 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KXH5_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 1.940e-10
Identity = 38/114 (33.33%), Postives = 54/114 (47.37%), Query Frame = 0
Query:    1 LPIWWCPWIHDLAVMVGCLKHGLLNVNAMRTDASLPLTPASVSHHIMRSLVTPVAGGRMSISGLGSARGGRGGASLTQEDTTAWVAQLSCQFPSRRALENRVFAICVLLTQHLP 114
            +P WWCPWIHD A++ G L+HG+    A+    +L +   +V HH+ R  V              S         L+ E    WVA  S  FP+  ALE +V  + + LT+ LP
Sbjct: 1537 MPRWWCPWIHDRALLDGMLRHGIGAFLALHAHGALHVE--AVYHHVRRVFVD-------------SHHAATALEHLSSEAQAKWVAATSLTFPAAHALEKKVTRLALALTEDLP 1635          
BLAST of jgi.p|Trimin1|133924 vs. uniprot
Match: A0A7S1VX35_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S1VX35_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 8.850e-10
Identity = 35/111 (31.53%), Postives = 56/111 (50.45%), Query Frame = 0
Query:    1 LPIWWCPWIHDLAVMVGCLKHGLLNVNAMRTDASLP-LTPASVSHHIMRSLVTPVAGGRMSISGLGSARGGRGGASLTQEDTTAWVAQLSCQFPSRRALENRVFAICVLLT 110
            +P+WWCPWIHDL +++    HGL +V +      LP L   SV +H+  + V    G   ++      R        ++E+  AWV   + +FP+   +ENR+  +C  LT
Sbjct:  764 VPVWWCPWIHDLVILIHAAVHGLQSVTS-----ELPRLQQLSVENHVRETFVKGANGKSPTLPDSFLRR-------ASEEELDAWVQMQAQEFPTPTVIENRLALMCSQLT 862          
BLAST of jgi.p|Trimin1|133924 vs. uniprot
Match: A0A024UQC0_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UQC0_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 1.250e-9
Identity = 35/113 (30.97%), Postives = 56/113 (49.56%), Query Frame = 0
Query:    1 LPIWWCPWIHDLAVMVGCLKHGLLNVNAMRTDASLPLTPASVSHHIMRSLVTPVAGGRMSISGLGSARGGRGGASLTQEDTTAWVAQLSCQFPSRRALENRVFAICVLLTQHL 113
            +P+WWCPWIHD A++   L HG+ +   +    +L +   +V  H++R  +T    G   +  L  +         T  D  AW  Q S +FP    LE +V  +C++LT+ L
Sbjct: 1530 MPVWWCPWIHDAALLEAMLTHGVGSFLELHKHKALHVD--AVFDHVVRVFLT--GDGATQLPALNPSM------FPTDADKFAWARQTSLEFPPVDILEKKVMRLCLMLTEEL 1632          
BLAST of jgi.p|Trimin1|133924 vs. uniprot
Match: A0A7S0ULG0_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0ULG0_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 2.230e-9
Identity = 35/117 (29.91%), Postives = 58/117 (49.57%), Query Frame = 0
Query:    2 PIWWCPWIHDLAVMVGCLKHGLLNV-----NAMRTDASLPLTPASVSHHIMRSLVTPVAGGRMSISGLGSARGGRGGASLTQEDTTAWVAQLSCQFPSRRALENRVFAICVLLTQHL 113
            P+WWCPWIHD A++      GL ++     +    +A    +  +++ HI  +LV   A    SI G  S+           ++T AW+ + + +FPS  A+E R+  +C  LT+ L
Sbjct:  687 PVWWCPWIHDAALLAHTSTRGLFSILRDLESESGREAGPVFSRQAITQHIRSTLVAD-ASIAQSIKGASSS-----------DETAAWIERYAKEFPSLNAIERRLAFLCAKLTEDL 791          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|133924 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CI28_9STRA6.050e-79100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A6H5KVU7_9PHAE7.370e-1861.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LDU9_ECTSI1.010e-1761.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S4D9Z2_HETAK2.440e-1636.94Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A1V9ZZP1_9STRA1.190e-1133.33Chromodomain-helicase-DNA-binding protein n=1 Tax=... [more]
A0A7S2GE25_9STRA2.890e-1152.08Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A485KXH5_9STRA1.940e-1033.33Aste57867_12909 protein n=1 Tax=Aphanomyces stella... [more]
A0A7S1VX35_9STRA8.850e-1031.53Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A024UQC0_9STRA1.250e-930.97Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
A0A7S0ULG0_9STRA2.230e-929.91Hypothetical protein n=1 Tax=Pseudo-nitzschia deli... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_190contigContig_190:208651..208992 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|133924mRNA_17167Tribonema minus UTEX_B_3156 mRNAContig_190 208651..208992 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|133924|gw1.190.14.1 ID=Trimin1|133924|gw1.190.14.1|Name=jgi.p|Trimin1|133924|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=114bp
LPIWWCPWIHDLAVMVGCLKHGLLNVNAMRTDASLPLTPASVSHHIMRSL
VTPVAGGRMSISGLGSARGGRGGASLTQEDTTAWVAQLSCQFPSRRALEN
RVFAICVLLTQHLP
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