Trimin1|353855|estExt_Genemark1.C_Ctg_1890009 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|353855
Unique NameTrimin1|353855|estExt_Genemark1.C_Ctg_1890009
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length1116
Homology
BLAST of jgi.p|Trimin1|353855 vs. uniprot
Match: A0A835Z6I5_9STRA (SWIM-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6I5_9STRA)

HSP 1 Score: 1915 bits (4961), Expect = 0.000e+0
Identity = 1115/1115 (100.00%), Postives = 1115/1115 (100.00%), Query Frame = 0
Query:    1 MPYQQLLLQQSMPYQQLHPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIHLXQQVLXXEAAAQHAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAHDVLIARAVLAEMQALPTRVTPSAVLFEHIPQLESDSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTSSPEPLITEAYLMSRQCLASVRPHPNLPRTHLITAGTTLAAFVDFYGPESQYNFSAGDASVMKFSDDDPRPLAIVHNSAGSDNILTLTAAGRELLEQGKGARSAYHMFLHCQGSTRDSGANCHRNPGPNDKWCSSTTGECELGCTWKHNKKQPAHACRVHIKVSATVAQIAAAEMQVQFEGEHTTDGVVPVPVNPDKLDLSCHVIRELYNSDRSGQASRSRMLAQIAAMVPRGAPLTGRNTPTARQVTSALCIERPLESGVIVLYYKSVRGGRWQLIITTEEALDKCAFTVIGAMVPEGMQSLALSISNEENEDTTFILAKTLENAAPCGEDCRHEWHEEWVDDKAAYYRKRRCRMVTPPLAFPVMVGIDKSSMSRKAFLRAGWLNIEKKLQSKKRKADEGGDPGAEEHVAYKKAEPHPMLRAFDLCLRILLHSQSADEYNRKLEIFLDMIEQCYIKQYFGGRWGDAMGDHIGHGVPGYAATNNAVESGFLIVDKCLLFGKMCSRFTYLIELVLGVTADGTPTMGPSYFPIFKRLLSERKRHGRKVVRRPVEKQRDCNARWLLLEEFVKRPEHPLDPAGPEGPSEWYLVKAREGAIAEPKKPPAPAAPKGKXXXXXXXXXXXXXXXXXXXXXKGQFDPTTAFDELFRASEPADIPVADGFYAVGMRDGPGGARIVTCICRDYYHRGNSHDNCKHAIAAILYKEVEDAAAQAKRERLLLQQQESDDESDXXXXXXXXXRLLLPHKMHIMKYLGKVEQRKPDKDQVLYDACKALDWARVHARLLRRLKGGCKGAQGGGVVVHPVRDVTIAAGVECDIEFRPILDYMCTELTLRPITRIIRNGMARDGKITLRTGDIVYSVTAVVGGAETTVHISCDDTAREAEQMLRDATVERVVSTQPYVACGDSNEPHLEKRAKDYCGQQNKRKSARK 1115
            MPYQQLLLQQSMPYQQLHPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIHLXQQVLXXEAAAQHAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAHDVLIARAVLAEMQALPTRVTPSAVLFEHIPQLESDSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTSSPEPLITEAYLMSRQCLASVRPHPNLPRTHLITAGTTLAAFVDFYGPESQYNFSAGDASVMKFSDDDPRPLAIVHNSAGSDNILTLTAAGRELLEQGKGARSAYHMFLHCQGSTRDSGANCHRNPGPNDKWCSSTTGECELGCTWKHNKKQPAHACRVHIKVSATVAQIAAAEMQVQFEGEHTTDGVVPVPVNPDKLDLSCHVIRELYNSDRSGQASRSRMLAQIAAMVPRGAPLTGRNTPTARQVTSALCIERPLESGVIVLYYKSVRGGRWQLIITTEEALDKCAFTVIGAMVPEGMQSLALSISNEENEDTTFILAKTLENAAPCGEDCRHEWHEEWVDDKAAYYRKRRCRMVTPPLAFPVMVGIDKSSMSRKAFLRAGWLNIEKKLQSKKRKADEGGDPGAEEHVAYKKAEPHPMLRAFDLCLRILLHSQSADEYNRKLEIFLDMIEQCYIKQYFGGRWGDAMGDHIGHGVPGYAATNNAVESGFLIVDKCLLFGKMCSRFTYLIELVLGVTADGTPTMGPSYFPIFKRLLSERKRHGRKVVRRPVEKQRDCNARWLLLEEFVKRPEHPLDPAGPEGPSEWYLVKAREGAIAEPKKPPAPAAPKGKXXXXXXXXXXXXXXXXXXXXXKGQFDPTTAFDELFRASEPADIPVADGFYAVGMRDGPGGARIVTCICRDYYHRGNSHDNCKHAIAAILYKEVEDAAAQAKRERLLLQQQESDDESDXXXXXXXXXRLLLPHKMHIMKYLGKVEQRKPDKDQVLYDACKALDWARVHARLLRRLKGGCKGAQGGGVVVHPVRDVTIAAGVECDIEFRPILDYMCTELTLRPITRIIRNGMARDGKITLRTGDIVYSVTAVVGGAETTVHISCDDTAREAEQMLRDATVERVVSTQPYVACGDSNEPHLEKRAKDYCGQQNKRKSARK
Sbjct:    1 MPYQQLLLQQSMPYQQLHPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIHLXQQVLXXEAAAQHAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAHDVLIARAVLAEMQALPTRVTPSAVLFEHIPQLESDSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTSSPEPLITEAYLMSRQCLASVRPHPNLPRTHLITAGTTLAAFVDFYGPESQYNFSAGDASVMKFSDDDPRPLAIVHNSAGSDNILTLTAAGRELLEQGKGARSAYHMFLHCQGSTRDSGANCHRNPGPNDKWCSSTTGECELGCTWKHNKKQPAHACRVHIKVSATVAQIAAAEMQVQFEGEHTTDGVVPVPVNPDKLDLSCHVIRELYNSDRSGQASRSRMLAQIAAMVPRGAPLTGRNTPTARQVTSALCIERPLESGVIVLYYKSVRGGRWQLIITTEEALDKCAFTVIGAMVPEGMQSLALSISNEENEDTTFILAKTLENAAPCGEDCRHEWHEEWVDDKAAYYRKRRCRMVTPPLAFPVMVGIDKSSMSRKAFLRAGWLNIEKKLQSKKRKADEGGDPGAEEHVAYKKAEPHPMLRAFDLCLRILLHSQSADEYNRKLEIFLDMIEQCYIKQYFGGRWGDAMGDHIGHGVPGYAATNNAVESGFLIVDKCLLFGKMCSRFTYLIELVLGVTADGTPTMGPSYFPIFKRLLSERKRHGRKVVRRPVEKQRDCNARWLLLEEFVKRPEHPLDPAGPEGPSEWYLVKAREGAIAEPKKPPAPAAPKGKXXXXXXXXXXXXXXXXXXXXXKGQFDPTTAFDELFRASEPADIPVADGFYAVGMRDGPGGARIVTCICRDYYHRGNSHDNCKHAIAAILYKEVEDAAAQAKRERLLLQQQESDDESDXXXXXXXXXRLLLPHKMHIMKYLGKVEQRKPDKDQVLYDACKALDWARVHARLLRRLKGGCKGAQGGGVVVHPVRDVTIAAGVECDIEFRPILDYMCTELTLRPITRIIRNGMARDGKITLRTGDIVYSVTAVVGGAETTVHISCDDTAREAEQMLRDATVERVVSTQPYVACGDSNEPHLEKRAKDYCGQQNKRKSARK 1115          
BLAST of jgi.p|Trimin1|353855 vs. uniprot
Match: A0A836CHP0_9STRA (SWIM-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHP0_9STRA)

HSP 1 Score: 1301 bits (3367), Expect = 0.000e+0
Identity = 704/798 (88.22%), Postives = 715/798 (89.60%), Query Frame = 0
Query:  355 AQIAAAEMQVQFEGEHTTDGVVPVPVNPDKLDLSCHVIRELYNSDRSGQASRSRMLAQIAAMVPRGAPLTGRNTPTARQVTSALCIE--RPLES--GVIVLYYKSVRGGRWQLIITTEEAL--DKCAFTVIGAMVPEGMQSLALSISNEENEDTTFILAKTLENAAPCGEDCRHEWHEEWVDDKAAYYRKRRCRMVTPPLAFPVMVGIDKSSMSRKAFLRAGWL--------------NIEKKLQSKKRKADEGGDPGAEEHVAYKKAEPHPMLRAFDLCLRILLHSQSADEYNRKLEIFLDMIEQ-----------------CYIKQYFGGRWGDAMGDHIGHGVPGYAATNNAVESGFLIVDKCLLFGKMCSRFTYLIELVLGVTADGTPTMGPSYFPIFKRLLSERKRHGRKVVRRPVEKQRDCNARWLLLEEFVKRPEHPLDPAGPEGPSEWYLVKAREGAIAEPKKPPAPAAPKGKXXXXXXXXXXXXXXXXXXXXXKGQFDPTTAFDELFRASEPADIPVADGFYAVGMRDGPGGARIVTCICRDYYHRGNSHDNCKHAIAAILYKEVEDAAAQAKRERLLLQQQESDDESDXXXXXXXXXRLLLPHKMHIMKYLGKVEQRKPDKDQVLYDACKALDWARVHARLLRRLKGGCKGAQGGGVVVHPVRDVTIAAGVECDIEFRPILDYMCTELTLRPITRIIRNGMARDGKITLRTGDIVYSVTAVVGGAETTVHISCDDTAREAEQMLRDATVERVVSTQPYVACGDSNEPHLEKRAKDYCGQQNKRKSARK 1115
            A+IAAAEMQVQFEGEHTTDGVVPVPVNPDKLDLSC VIRELYNSDRSGQASRSRMLAQ+         L  R  P  R+  + L +   RPL +          + R      +  T+      KCAFTVIGAMVPEGMQ LALSISNEENEDTTFILAKTLENAAPCGEDCRHEWHEEWVDDKAAYYRKRRCRMVTPPLAFPVMVGIDKSSMSRKAFLRA WL              NIEKKLQSKKRKADEGGDPGAEEHVAYKKAEPHPMLRAFDLCLRILLHSQSADEYNRKLEIFLDMIEQ                  YIKQYFGGRWGDAMGDHIGHGVPGYAATNNAVESGFLIVDKCLLFGKMCSRFTYLIELVLGVTADGTPTMGPSYFP+FKRLLSERKRHGRKVVRRPVEKQRDCNARWLLLEEFVKRPEHPLDPAGPEGPSEWYLV+AREGAIAEPKKPPAPAAPKGKXXXXXXXXXXXXXXXXXXXXXKGQFDPTTAFDELFRASEPADIPVADGFYAVGMRDGPGGARIVTCICRDYYHRGNSHDNCKHAIAAILYKEVEDAAAQAKRERLLLQQQESDDESDXXXXXXXXXRLLLPHKMHIMKYLGKVEQRKPDKDQVLYDACKALDWARVHARLLRRLKGGCKGAQGGGVVVHPVRDVTIAAGVECDIEFRPILDYMCTELTLRPITRIIRNGMARDGKITLRTGDIVYSVTAVVGGAETTVHISCDDTAREAEQMLRDATVERVVSTQPYVACGDSNEPHLEKRAKDYCGQQNKRKSARK
Sbjct:   45 AEIAAAEMQVQFEGEHTTDGVVPVPVNPDKLDLSCLVIRELYNSDRSGQASRSRMLAQLG--------LQYRAPPRERRDCALLQVRARRPLAAHXXXXXXXXXAARPQNQFFVSDTKWTTCPQKCAFTVIGAMVPEGMQPLALSISNEENEDTTFILAKTLENAAPCGEDCRHEWHEEWVDDKAAYYRKRRCRMVTPPLAFPVMVGIDKSSMSRKAFLRARWLVSCCFFHNIRATMKNIEKKLQSKKRKADEGGDPGAEEHVAYKKAEPHPMLRAFDLCLRILLHSQSADEYNRKLEIFLDMIEQWWKNGWLGKTTPLADWISYIKQYFGGRWGDAMGDHIGHGVPGYAATNNAVESGFLIVDKCLLFGKMCSRFTYLIELVLGVTADGTPTMGPSYFPMFKRLLSERKRHGRKVVRRPVEKQRDCNARWLLLEEFVKRPEHPLDPAGPEGPSEWYLVRAREGAIAEPKKPPAPAAPKGKXXXXXXXXXXXXXXXXXXXXXKGQFDPTTAFDELFRASEPADIPVADGFYAVGMRDGPGGARIVTCICRDYYHRGNSHDNCKHAIAAILYKEVEDAAAQAKRERLLLQQQESDDESDXXXXXXXXXRLLLPHKMHIMKYLGKVEQRKPDKDQVLYDACKALDWARVHARLLRRLKGGCKGAQGGGVVVHPVRDVTIAAGVECDIEFRPILDYMCTELTLRPITRIIRNGMARDGKITLRTGDIVYSVTAVVGGAETTVHISCDDTAREAEQMLRDATVERVVSTQPYVACGDSNEPHLEKRAKDYCGQQNKRKSARK 834          
BLAST of jgi.p|Trimin1|353855 vs. uniprot
Match: A0A835YUM4_9STRA (SWIM-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUM4_9STRA)

HSP 1 Score: 516 bits (1330), Expect = 2.190e-158
Identity = 355/983 (36.11%), Postives = 480/983 (48.83%), Query Frame = 0
Query:  217 THLITAGTTLAAFVDFYGPE--SQYNFSAGDASVMKFSDDDPRPLAIVH---NSAGSDNILTLTAAGRELLEQGKGARSAYHMFLHCQGST---RDSGANCHRNPGPNDKWCSSTTGECELGCTWKHNKKQPAHACRVHIKVSATVAQIAAAEMQVQFEGEHTTDGVVPVPVNPDKLDLSCHVIRELYNSDRSGQASRSRMLAQIAAMVPRGAPLTGRNTPTARQVTSALCIER---------------------------PLESGVIVLYYKSVRGGRWQLIITTEEALD---------------------KCAFTVIGAMVPEG-MQSLALSISNEENEDTTFILAKTLENAAPCGEDCRHEWHEEWVDDKAAYYRKRRCRMVTPPLAFPVMVGIDKSSMSRKAFLRAGWL-------NIE--KKLQSKKRKADEGGDPGAEEHVAYKKAEPHPMLRAFDLCLRILLHSQSADEYNRKLEIFLDMIEQC-------------------YIKQYFGGRWGDAMGDHIGHGVPGYAATNNAVESGFLIVDKCLLFGKMCSRFTYLIELVLGVTADGTPTMGPSYFPIFKRLLSERKRHGRKVVRRPVEKQRDCNARWLLLEEF-VKRPEHPLDPAGPEGPSEWYLVK--------AREGAIAEPKKPPAPAAPKGKXXXXXXXXXXXXXXXXXXXXXKGQFDPTTAFDELFRASEPADIPVAD--GFYAVGMRDGPGGARIVTCICRDYYHRGNSHDNCKHAIAAILYKEVEDAAAQAKRERLLLQQQESDDESDXXXXXXXXXRLLLPHKMHIMKYLGKVEQRKPDKDQVLYDACKALDWARVHARLLRRLKGGCKGAQGGGVVVHPVRDVTIAAGVECDIEFRPILDYMCTELTLRPITRIIRNGMARDGKITLRTGDIVYSVTAVVGGAET-TVHISCDDTAREAEQMLRDATVERVVSTQPYVACG-DSNEPHLEKRAK 1101
            T LI  G  +  F + YGP   S YN       +   S+ D RPL   H      G DN+ TLTAAG EL   G+G+R A+   LHC G T   + +GANC RNP    KWC    G C  GCTWK     P H CRV  +++A+V Q+    +Q++  G+HTT G  P  V+P     S H  R + + D +GQ +  +  AQ+AA+ P G+  +G       Q+++AL   R                           PL SGVIVLY++S  GG W L++TT  ALD                       AFT+IG ++P G ++ L + ISN EN  TT  +A+ L  AAPCG DC+H W      D   Y+R R C    P   F  MV IDK++ S KAF  AGW        N+   ++L  KKRKA E GD        Y+K    P++ A D  +R+++ S SA++Y  +L + LD +E                     Y++QY GG WG+ MGD+IGH VPGY AT N+ E  F +VD CL +GK C  F YL+ELVLG+TADG  T G +YF +F++L  +++  GR++  R VE QR CN RW+ L++  VKRP  P    G  G +EWY V+        +R GAI+     P PAA                          G FDPT A +  +   E  D P      +Y VGMR  PGGA I+ C C DY+ RGN+HD CKHA+AA+ YKE E+A+   +++ ++                         H+ H+M Y+  VE +KPDK+  LY AC+ L+W R   + LR  K     A           DV IA G  C +    + + +C EL L+    +I +G   D K   R GDIV SV+  VG AE  T+ +     A +A+  L     ER +S   Y   G D   PH+ KRAK
Sbjct:  365 TFLIHQGADVPDFKERYGPYAFSAYNHLTDKTRLCTVSEQDARPLVQEHLHLGKRGIDNVRTLTAAGEELRAGGRGSRQAFRTTLHCAGGTSAGKPNGANCQRNP-CGGKWCDGV-GACAPGCTWKRG---PNHNCRVSYEITASVDQVHLGIVQLRIVGQHTT-GYAPKGVDPSCRAKSVHAKRVIRDVDSAGQQTLFQFRAQLAALAPEGSARSGLFHQRPAQLSNALAYVRRKRGNRGVGVFTGINAMIRGKCLSIAVPLSSGVIVLYFRSKPGGLWHLVVTTPAALDILRDPNIRFFVSDTKWDTNPQHFAFTIIGCVMPGGGLRPLVIGISNIENAKTTLAMAEALTIAAPCGPDCQHPWKHGRKKD-GTYHRWRACPNPPP---FSPMVAIDKAAGSLKAFKAAGWRVSTCFFHNVRSLRELHFKKRKAVEDGD------TPYEKPRKEPVIEALDKLIRLVIRSHSAEQYEERLALLLDTVEDWGSDKKRWLGTATPTADFVNYLRQYMGGAWGETMGDYIGHDVPGYEATTNSGERSFGVVDMCLFYGKRCHSFRYLLELVLGITADGKRTRGTAYFDLFQQLWEDKEEGGRRL--RTVELQRQCNGRWIYLQKHGVKRPA-PHQRTGANG-TEWYFVRNGVCPIAVSRTGAIS-----PQPAA----------------------EVEDGAFDPTDAIEAFYALIEEQDPPPPRQWSYYPVGMRTTPGGAPIIWCSCEDYFRRGNTHDPCKHAVAALAYKEEEEASGAEQKQAVVE-----------------------THQHHVMSYIKHVEHKKPDKNMELYLACRELNWVRAR-KALRSAKRTAAAAP-----AAAPHDVVIAPGTVCTVGLDEVSEDVCDELKLQGDAYLISHGEVCDPKYRERIGDIVVSVSRRVGDAEVETLRLDSAAAATQAQIWLAATETERGMSLMTYNHNGRDIELPHMPKRAK 1271          
BLAST of jgi.p|Trimin1|353855 vs. uniprot
Match: A0A835YS27_9STRA (SWIM-type domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS27_9STRA)

HSP 1 Score: 436 bits (1120), Expect = 1.180e-128
Identity = 343/1005 (34.13%), Postives = 472/1005 (46.97%), Query Frame = 0
Query:  185 TTTSSPEPLITEAYLMSRQCLASVRPHPNLPRTHLITAGTTLAAFVDFYGPE-SQYNFSAGDASVMKFSDDDPRPLAIVHNSAGS---------DNILTLTAAGRELLEQGKGARSAYHMFLHCQGSTRDSGANCHRNPGPNDKWCSSTTGE--CELGCTWKHNKKQPAHACRVHIKVSATVAQIAAAEMQVQFEGEHTTDGVVPVPVNPDKLDLSCHVIRELYNSDRSGQASRSRMLAQIAAMVPRGAPLTGR------------------------NTPTARQVT---SALCIERPLESGVIVLYYKSVRGGRWQLIITTEEALD---------------------KCAFTVIGAMVP---EGMQSLALSISNEENEDTTFILAKTLENAAPCGEDCRHEWHEEWVDDKAAYYRKRRCRM--VTPPLAFPVMVGIDKSSMSRKAFLRAGWL--------------NIEKKLQSKKRKADEGGDPGAEEHVAYKKAEPHPMLRAFDLCLRILLHSQSADEYNRKLEIFLDMIEQCYIKQYFGGR------------------WGDAMGDHIGHGVPGYAATNNAVESGFLIVDKCLLFGKMCSRFTYLIELVLGVTADGTPTMGPSYFPIFKRLLSERKRHGRKVVRRPVEKQRDCNARWLLLEEFVKRPEHPLDPAGPEGPSEWYLVKAREGAIAEPKKPPAPAAPKGKXXXXXXXXXXXXXXXXXXXXXKGQFDPTTAFDELFRASEPADIPVADGFYAVGMRDGPGGARIVTCICRDYYHRGNSHDNCKHAIAAILYKEVEDAAAQAKRERLLLQQQESDDESDXXXXXXXXXRLLLPHKMHIMKYLGKVEQRKPDK--DQVLYDACKALDWARVHARLL-----RRLKGGCKGAQGGGVVVHPVRDVTIAAGVECDIEFRPILDYMCTELTLRPITRIIRNGMARDGKIT--------LRTGDIVYSVTAVVGGAETTVHISCDDTAREAEQMLRDATVE 1077
            T    P+ L+TE  L   +CLASV    +  RT+ +   T+  AF++FY PE S YNF AG+  +   S +D R L + H +AG+         DN  TL+ AGREL+  GK  R  + + LHC G +  SGANC +NPG   +WC++  G+  C  GCTW+       H C V ++V+AT+AQ+    +Q+Q  G HT DGVVPVPV+  KLDLS      + N+ ++G   RS+ +    A+VP+GA LTGR                         T TA        AL +  PL +GVI LYY++  G + QL++++E+ALD                     K AF+VIG  VP    G + L  SISN E+ D+TF +A+ L+ A PC   C HEW E W D    Y R R C    VTP   F   VGIDKSS ++  F RAGW               N+++KL SKK                      H ++  FD  +R+++ +Q+A+ Y R L+  L  +E    + Y G                    W    GD     V G   T N VES FL V K + +  +   +  L  L LGV ADG      SYF  F+R ++ R + G+  V+  VE QR  N RWL     V+R  H     G    + WYLV      +A   K P PAA           XXXXXXXX         F+  T  +++    E A I   DG Y VG+   PG + ++TCIC D++ RG +H  CKHA+AA+ Y+E   A   A + R++  Q++                       HIM Y    E+ KP    D  LYDAC+A +WARV A L      RR  G    A      +     +T+AAGV C++ F  + D +  EL L   T ++RNG A   + T        L  GDIV+SV+     A   V I  D +AR+A+ ++ DA+ E
Sbjct:  458 TPRQPPQSLVTENELRRAECLASVEERGD--RTYTMHV-TSALAFMEFYCPELSTYNFLAGNHRMFPVSQEDSRELGVEHTAAGNKTGVGKHRIDNRYTLSPAGRELVALGKLNRQVFRLLLHCAGGSGGSGANCRKNPGAKGQWCAAAAGDGSCAPGCTWRRGAN---HHCAVEVRVTATIAQVLKHTVQLQITGRHTADGVVPVPVDLQKLDLSLIFDDYIRNTCQAGAVCRSKAIRDALALVPQGARLTGRCHLGRIHYSNVVSYAARLTCSAVPGTFTAFDAVVRQHALSMATPLPNGVIALYYRAESGEKMQLVLSSEKALDALRDKSVQFVLSDTNWKAAPQKPAFSVIGCPVPLPVGGFRPLVASISNTEDGDSTFFMAEALQLAVPCCATCDHEWKEGWTD--GTYRRWRSCAKDSVTP---FRPTVGIDKSSTAQAGFRRAGWSISVCFFHSIKAMLKNLKEKLGSKK----------------------HWLIPFFDDAIRMVMRAQTAEVYKRALDALLATVESWGTRGYLGADPADFISYLKTAMGFEGTLWEGTQGDFRARDVEGLENTTNNVESHFLSVQKTIFYCNLNGTYARLAPLFLGVRADGEGRP-VSYFDTFERAMAARAKEGKGRVK-SVELQRLVNGRWLHATGKVQRRRHTGGHVG----TRWYLVNKEVPNVA---KSPLPAA--------VASXXXXXXXXGTAETLPDSFNVDTELNDILYEVEAAGIKAEDGHYVVGIVSEPGRSDVITCICPDFWRRGGTHSLCKHAVAAVAYEEEHAATGAAAKRRVVELQRK-----------------------HIMDYFMITERNKPRAATDHELYDACRAGEWARVRAILEEGPRPRRSLGDRDDA----TTIATRYTLTLAAGVWCNVGFERVCDKVRAELDLPAATYVVRNGYAAQYEWTPKIRPKRDLCAGDIVFSVST----AADEVLIVDDASARDAQLLVADASAE 1381          
BLAST of jgi.p|Trimin1|353855 vs. uniprot
Match: A0A835YU83_9STRA (SWIM-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU83_9STRA)

HSP 1 Score: 306 bits (783), Expect = 1.730e-88
Identity = 220/658 (33.43%), Postives = 301/658 (45.74%), Query Frame = 0
Query:  362 MQVQFEGEHTTDGVVPVPVNPDKLDLSCHVIRELYNSDRSGQASRSRMLAQIAAMVPRGAPLTGRNTPTARQVTSALC------------------------IERPLESGVIVLYYKSVRGGRWQLIITTEEALDKCAFTVIGAMVPEGMQSLALSISNEENEDTTFILAKTLENAAPCGEDCRHEWHEEWVDDKAAYYRKRRCRMVTPPLAFPVMVGIDKSSMSRKAFLRAGWLNIEKKLQSKKRKADEGGDPGAEEHVAYKKAEPHPMLRAFDLCLRILLHSQSADEYNRKLEIFLDMIEQC-----------------YIKQYFGGRWGDAMGDHIGHGVPGYAATNNAVESGFLIVDKCLLFGKMCSRFTYLIELVLGVTADGTPTMGPSYFPIFKRLLSERKRHGRKVVRRPVEKQRDCNARWLLLEEFVKRPEHPLDPAGPEGPSEWYLVKAREGAI----AEPKKPPAPAAPKGKXXXXXXXXXXXXXXXXXXXXXKGQFDPTTAFDELFRASEPADIPVADGFYAVGMRDGPGGARIVTCICRDYYHRGNSHDNCKHAIAAILYKEVEDAAAQAKRERLLLQQQESDDESDXXXXXXXXXRLLLPHKMHIMKYLGKVEQRKPDKDQVLYDACKALDWARVHARLLRRLKG 974
            M+VQ  GEHT  GVVP  V+P  L  S   +  +YN+D  GQA+R R+  Q  A VP GA LTGRNT T +Q+++AL                         + R L SGVI+LYYKS  GG WQ+++TTE+ALD    T I + V           S+ +++     LA T+  A   G                        R    PL     V  D    +R+                                   K    HPML  FD+ +R L+ +QS  +Y   L+  L  +E+                  Y+K+ FG RW  + G++IG    GY A NN+VES F  +D CL FGK C+ F YL+E+VLGVTA+   T+GPSYF  F  +L+++   G                RW+ L++ V+ PE   +   PEG SEWYLV      I    ++P++P APAA                         +  FD    F+++FR     D PV  GFY VGMR   GG+RIVTC+C DYY+RGN+H  C+HA+AA+ +KE +D   +AK+E ++ QQ                       +M +M YL  VEQ + DKD  LYDAC A +W  V   LL++  G
Sbjct:   19 MKVQIRGEHTPGGVVPRAVDPASLTPSVLEVDHVYNADCDGQATRCRLRRQALARVPAGAALTGRNTMTKKQISAALYRSRKKRRSEGLGTFTGVHAAISKNLYRTLPSGVIILYYKSEPGGFWQIVVTTEKALDVLRDTSIRSFV-----------SDTKHDTCPQKLAFTVIGAVLPG------------------------RRGMQPL-----VERDDVPQARR-----------------------------------KPKVKHPMLAEFDMAIRALVTAQSESKYKATLKALLRTVERWGKDGWLVSRSPPEYFVKYLKKSFGKRWFGSTGNYIGQDESGYEANNNSVESSFRTMDACLFFGKRCTSFPYLMEMVLGVTANWKLTIGPSYFEQFAGVLADKHLEG---------------PRWIKLQDGVQLPESLSEHDEPEGRSEWYLVSEMPINICITRSKPERPIAPAA------------------VWRENGCQITFDRENEFNDIFRVLTLRDAPVQHGFYTVGMRISAGGSRIVTCMCGDYYYRGNTHHPCRHAVAALAFKEEQDEPDEAKKEDIVRQQ-----------------------RMQVMSYLKNVEQGRADKDIRLYDACAAANWPLVE-HLLKQQDG 544          
BLAST of jgi.p|Trimin1|353855 vs. uniprot
Match: A0A835YZ00_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ00_9STRA)

HSP 1 Score: 256 bits (653), Expect = 2.010e-67
Identity = 205/626 (32.75%), Postives = 291/626 (46.49%), Query Frame = 0
Query:  190 PEP-LITEAYLMSRQCLASVRPHPNLPRTHLITAGTTLAAFVDFYGPE-SQYNFSAGDASVMKFSDDDPRPLAIVHNSAGS---------DNILTLTAAGRELLEQGKG----------ARSAYHMFLHCQGSTRDSGANCHRNPGPNDKWCSSTTGECELGCTWKHNKKQPAHACRVHIKVSATVAQIAAAEMQVQFEGEHTTDGVVPVPVNPDKLDLSCHVIRELYNSDRSGQASRSRMLAQIAAMVPRGAPLTGRN--------------TPTARQV-------------TSALCIERPLESGVIVLYYKSVRGGRWQLIITTEEALD---------------------KCAFTVIGAMVPE---GMQSLALSISNEENEDTTFILAKTLENAAPCGEDCRHEWHEEWVDDKAAYYRKRRCRMVTPPLAFPVMVGIDKSSMSRKAFLRAGWLNIEKKLQSKKRKADEGGDPGAEEHVAYKKAEPHPMLRAFDLCLRILLHSQSADEYNRKLEIFLDMIEQC------------------YIKQ---YFGGRWGDAMGDHIGHGVPGYAATNNAVESGFLIVDKCLLFGKMCSRFTYLIELVLGVTADGTPTMGPSYFPIFKRL 722
            P+P L TEA L    C++ V+     PRT+ +    TLA F++ Y  E S YN  A   ++ KFS  DPRPL    ++A +         DN  TL  A +EL++  +            R AY M L C G +  +GANC + PG   +WC STTG C   C      K+  H CRV + VSATV Q+A  E+Q++F G HT +G+V VPV P  L +S  VI + ++S  +  +SRSR L    A++P+GA L+GR               T     V             T AL I RPL + VI L+Y +V GGR QL++T+E+ALD                     K   T +G  +P    GMQ +  SISN EN +TT  +A++L+ A PC   C H W ++W D    Y R R C    PPL          +   R++       ++E  +QS+ +     G   A             ML  F+  +R+L+ +Q+A+ Y   L   L+++                     Y+K    + G  W   MGD   H +     TNN  ES F++++KCLL+ K    F+ L  L LG+ A G PT   SYF + K+L
Sbjct:  333 PQPQLPTEAELQRAACVSHVK--EVAPRTYTMRVSDTLA-FIELYCNELSGYNTFADRTTIEKFSVADPRPLVREMHAATNLALIGKHRPDNRFTLEPARQELMDLAESDHSEDKCETSGRRAYRMILFCAGGSNGNGANCSKFPGRKSQWCDSTTGTCAPDCP---GIKKNNHHCRVTLYVSATVTQVARQEVQLEFRGSHTQNGIVAVPVAPANLKVS-QVITDHHHSSLA--SSRSRALQDAFALIPQGAELSGRYRISRVGHSNAKAYVTKLTSSVVPGTFSAFDNLVRTHALRIYRPLPNRVIPLHYTAVEGGRMQLVLTSEDALDVLRDKSLQFLVSDSNWDLAKEKTVLTTVGCPLPGPAGGMQPIIASISNTENTETTMQVARSLQGAVPCCATCDHPWLDKWRD--GVYNRWRSCSRDNPPLP---------NCWDRQS------RHVEGGVQSRGKLKKLLGPTAA------------GMLPQFETAIRLLMRAQTAEVYQLVLLEVLELVTAWGSKRPSWLGRTPTAKFIKYLKTALGFEGTGWEGTMGDFSAHLLSLLHDTNNVTESHFMVIEKCLLYNKRNMAFSNLGPLFLGINAQGKPTRRLSYFQMVKQL 920          
BLAST of jgi.p|Trimin1|353855 vs. uniprot
Match: A0A835YYN2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYN2_9STRA)

HSP 1 Score: 138 bits (348), Expect = 2.130e-29
Identity = 112/423 (26.48%), Postives = 170/423 (40.19%), Query Frame = 0
Query:  215 PRTHLITAGTTLAAFVDFYGPESQYNFSAGDASVMKFSD---DDPRPLAIVHNSAGS---------------------DNILTLTA----AGRELLEQGKGARSAYHMFLHCQGSTR---DSGANCHRNPGPNDKWCSSTTGECELGCTWKH-----NKKQPAHACRVHIKVSATVAQIAAAEMQVQFEGEHTTDGVVPVPVNPDKLDLSCHVIRELYNSDRSGQASRSRMLAQIAAMVPRGAPLTGRNTPTARQVTSALCIERPLESGVI--------------------------------VLYYKSVRGGRWQLIITTEEALDKC-------AFT---------------VIGAMVPEGMQSLALSISNEENEDTTFILAKTLENAAPCGE-DCRHEWHEEWVDDKAAYYRKRRCRMVTP 546
            P T+ +  G  +A F++ YGP+     +     V  + +     P P       +G                      D +  L A    A R +       R A+  +LHC G+      SG+NC R+P    KWC+S TG C+  C W         + P H CR+H++++ATV+Q+A   + VQ  G HT +GV   PV  D+L  S      +  + R+G   RS ++A  +  +  GAP T R +P   Q ++ +  ++ +  G +                                V+YY S   G  QL++ TEE+L          AFT               V+ A    G   LA+S+S  ENE TT    + + +A PC +  C H W E   +D   Y R R C +  P
Sbjct:   62 PMTYEVPQGAAVAEFLELYGPDCVVMTNLLWGKVKHYRELARTQPHPSNCTSGRSGGGGRRASATSKNRYDDIRFLHGDGLARLAALEAHAARPVDPIPPVDRQAFSAYLHCAGADHRSGPSGSNCFRDP-CRGKWCASETGVCDPSCVWAQMPDFKRSRHPQHRCRMHVRLTATVSQVARGVVTVQVVGAHTAEGVEWRPVASDRLTPSVFAKDAVIRAARAGPVQRSSVVAIESKRLGEGAPHTTRVSPKRTQASALMAYDQRVSRGPVCGAHNSVDAAVRLYHLSMDDPLPPDRNPDGAQVIYYTSQHDGVLQLVVATEESLANARAHGCDQAFTDSKHDLASSKPATTPVLCAAPGGGTLPLAISVSTVENEVTTECALRAVRDAVPCSDPSCSHPWEEHTSEDCTVYRRYRPCALPCP 483          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353855 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A835Z6I5_9STRA0.000e+0100.00SWIM-type domain-containing protein n=1 Tax=Tribon... [more]
A0A836CHP0_9STRA0.000e+088.22SWIM-type domain-containing protein n=1 Tax=Tribon... [more]
A0A835YUM4_9STRA2.190e-15836.11SWIM-type domain-containing protein n=1 Tax=Tribon... [more]
A0A835YS27_9STRA1.180e-12834.13SWIM-type domain-containing protein n=2 Tax=Tribon... [more]
A0A835YU83_9STRA1.730e-8833.43SWIM-type domain-containing protein n=1 Tax=Tribon... [more]
A0A835YZ00_9STRA2.010e-6732.75Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YYN2_9STRA2.130e-2926.48Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 888..911
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 902..922
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 176..193
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 785..822
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 147..193
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 149..175
NoneNo IPR availablePANTHERPTHR15048STARCH-BINDING DOMAIN-CONTAINING PROTEIN 1coord: 22..818
IPR007527Zinc finger, SWIM-typePROSITEPS50966ZF_SWIMcoord: 848..890
score: 8.740811

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_189contigContig_189:52637..56815 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353855mRNA_17341Tribonema minus UTEX_B_3156 mRNAContig_189 52629..56815 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|353855|estExt_Genemark1.C_Ctg_1890009 ID=Trimin1|353855|estExt_Genemark1.C_Ctg_1890009|Name=jgi.p|Trimin1|353855|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1116bp
MPYQQLLLQQSMPYQQLHPQMYQQQMCQQQQMFQQQQMYQQQMYQQQMYQ
QYIHLQQQVLQQEAAAQHAAAAQQAAAAQQAAAAQQAAAAQQATTAQQAT
TAQQSTAAQQAAHDVLIARAVLAEMQALPTRVTPSAVLFEHIPQLESDSD
SDYDSDYDSNYDSDSDYDSDSDSGSDGDGDGNGNTTTSSPEPLITEAYLM
SRQCLASVRPHPNLPRTHLITAGTTLAAFVDFYGPESQYNFSAGDASVMK
FSDDDPRPLAIVHNSAGSDNILTLTAAGRELLEQGKGARSAYHMFLHCQG
STRDSGANCHRNPGPNDKWCSSTTGECELGCTWKHNKKQPAHACRVHIKV
SATVAQIAAAEMQVQFEGEHTTDGVVPVPVNPDKLDLSCHVIRELYNSDR
SGQASRSRMLAQIAAMVPRGAPLTGRNTPTARQVTSALCIERPLESGVIV
LYYKSVRGGRWQLIITTEEALDKCAFTVIGAMVPEGMQSLALSISNEENE
DTTFILAKTLENAAPCGEDCRHEWHEEWVDDKAAYYRKRRCRMVTPPLAF
PVMVGIDKSSMSRKAFLRAGWLNIEKKLQSKKRKADEGGDPGAEEHVAYK
KAEPHPMLRAFDLCLRILLHSQSADEYNRKLEIFLDMIEQCYIKQYFGGR
WGDAMGDHIGHGVPGYAATNNAVESGFLIVDKCLLFGKMCSRFTYLIELV
LGVTADGTPTMGPSYFPIFKRLLSERKRHGRKVVRRPVEKQRDCNARWLL
LEEFVKRPEHPLDPAGPEGPSEWYLVKAREGAIAEPKKPPAPAAPKGKAP
KAKASKAKAKAKAPAAKAPKGQFDPTTAFDELFRASEPADIPVADGFYAV
GMRDGPGGARIVTCICRDYYHRGNSHDNCKHAIAAILYKEVEDAAAQAKR
ERLLLQQQESDDESDDAADQAERDRLLLPHKMHIMKYLGKVEQRKPDKDQ
VLYDACKALDWARVHARLLRRLKGGCKGAQGGGVVVHPVRDVTIAAGVEC
DIEFRPILDYMCTELTLRPITRIIRNGMARDGKITLRTGDIVYSVTAVVG
GAETTVHISCDDTAREAEQMLRDATVERVVSTQPYVACGDSNEPHLEKRA
KDYCGQQNKRKSARK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007527Znf_SWIM