Trimin1|351830|estExt_Genemark1.C_Ctg_1000074 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|351830
Unique NameTrimin1|351830|estExt_Genemark1.C_Ctg_1000074
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length548
Homology
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BLAST of jgi.p|Trimin1|351830 vs. uniprot
Match: A0A836CN56_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN56_9STRA)

HSP 1 Score: 333 bits (854), Expect = 2.280e-104
Identity = 272/272 (100.00%), Postives = 272/272 (100.00%), Query Frame = 0 
Query:    1 MGMGRKLLSEEDTERRLATAAPSXXXXXXXXXXXXXXXXXEMGARMLAESXXXXXXXXXXXXXXXXXXPMAAAXXXXXXXXXXXXXXXXXXXXXXXXXAMDMGRRLQAERRLXXXXXXXXXXXXXXXXXXXXXXXEAREGDGTVTLVDVKGSRLLLVMPNELEPNLEVGVSSMYAAGILVQDKEVGTALADAERLRLKVRVEPGSGNGGWVQMESADAADPLSIASVPKNTSSALTYNGVRLSAKQWAAALADPSDAFHQCALHRRDGRQDA 272
            MGMGRKLLSEEDTERRLATAAPSXXXXXXXXXXXXXXXXXEMGARMLAESXXXXXXXXXXXXXXXXXXPMAAAXXXXXXXXXXXXXXXXXXXXXXXXXAMDMGRRLQAERRLXXXXXXXXXXXXXXXXXXXXXXXEAREGDGTVTLVDVKGSRLLLVMPNELEPNLEVGVSSMYAAGILVQDKEVGTALADAERLRLKVRVEPGSGNGGWVQMESADAADPLSIASVPKNTSSALTYNGVRLSAKQWAAALADPSDAFHQCALHRRDGRQDA
Sbjct:    1 MGMGRKLLSEEDTERRLATAAPSXXXXXXXXXXXXXXXXXEMGARMLAESXXXXXXXXXXXXXXXXXXPMAAAXXXXXXXXXXXXXXXXXXXXXXXXXAMDMGRRLQAERRLXXXXXXXXXXXXXXXXXXXXXXXEAREGDGTVTLVDVKGSRLLLVMPNELEPNLEVGVSSMYAAGILVQDKEVGTALADAERLRLKVRVEPGSGNGGWVQMESADAADPLSIASVPKNTSSALTYNGVRLSAKQWAAALADPSDAFHQCALHRRDGRQDA 272
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|351830 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A836CN56_9STRA2.280e-104100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 531..547
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..60
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 521..547

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_100contigContig_100:508100..516211 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|351830mRNA_10069Tribonema minus UTEX_B_3156 mRNAContig_100 508020..516211 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|351830|estExt_Genemark1.C_Ctg_1000074 ID=Trimin1|351830|estExt_Genemark1.C_Ctg_1000074|Name=jgi.p|Trimin1|351830|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=548bp
MGMGRKLLSEEDTERRLATAAPSAAPSSAPSMAPTMMPAMEMGARMLAES
AAPSTAPSAAPSMAPTMMPMAAARRLAVSAAPSAAPSSAPSMAPTMMPAM
DMGRRLQAERRLATAAPSAAPSMVPSFAPTMMPVMEAREGDGTVTLVDVK
GSRLLLVMPNELEPNLEVGVSSMYAAGILVQDKEVGTALADAERLRLKVR
VEPGSGNGGWVQMESADAADPLSIASVPKNTSSALTYNGVRLSAKQWAAA
LADPSDAFHQCALHRRDGRQDAALTYNGVHLSAEEWAAALLDQSDGNHQC
ALDRRSNSQRAALTYDGVQLSPEQWAAALSNPSDANHQRALSRYIDRQDA
ALTYGGVHLSPEQWAAALEDPSDPNHQRALDRRGHSQRAALTHDGVQLSA
EQWAAALEDPSDPNHQRALNRRSDKQDAALTYGGVQLTIEQWAAALADRS
NANHQRALDRRGDRQRAALRYDGVQLTTEQWAAALADRSNTNHQRALDRR
GDRQRAALTYDGVHLSAEQWAAALEDPSDPNHQRALNRRSDRLRKSA*
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