mRNA_1492 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|161947 vs. uniprot
Match: A0A835Z6R3_9STRA (Glycosyl transferase n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6R3_9STRA) HSP 1 Score: 582 bits (1501), Expect = 1.010e-210 Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 1 Query: 1 MKLIDVFCFNGEPILELRLEYLQDVVDEFVLVESKYTFSGKVKDTFYCDDLVQHPKVTVLRLDYAPPVADEEWCRERSGSSSFMEEGCMDHWFREQHQRDYPKSYIVNKYADEDYIVVCSDVDEIPRKELLVSLKQHGNGQLHTPIYLHMAMLMYNMGWQTDEQWLRAFVINKEGFCNAASVDEMRRAEPYRVAPNGGWHCSYFLNSRDLARKIQAFSHQEYNKPEYTDTAHCQRCLLSGKDVLGRGELKAYTGQVPELFIKFNEKMLFLQKFS 822 MKLIDVFCFNGEPILELRLEYLQDVVDEFVLVESKYTFSGKVKDTFYCDDLVQHPKVTVLRLDYAPPVADEEWCRERSGSSSFMEEGCMDHWFREQHQRDYPKSYIVNKYADEDYIVVCSDVDEIPRKELLVSLKQHGNGQLHTPIYLHMAMLMYNMGWQTDEQWLRAFVINKEGFCNAASVDEMRRAEPYRVAPNGGWHCSYFLNSRDLARKIQAFSHQEYNKPEYTDTAHCQRCLLSGKDVLGRGELKAYTGQVPELFIKFNEKMLFLQKFS Sbjct: 1 MKLIDVFCFNGEPILELRLEYLQDVVDEFVLVESKYTFSGKVKDTFYCDDLVQHPKVTVLRLDYAPPVADEEWCRERSGSSSFMEEGCMDHWFREQHQRDYPKSYIVNKYADEDYIVVCSDVDEIPRKELLVSLKQHGNGQLHTPIYLHMAMLMYNMGWQTDEQWLRAFVINKEGFCNAASVDEMRRAEPYRVAPNGGWHCSYFLNSRDLARKIQAFSHQEYNKPEYTDTAHCQRCLLSGKDVLGRGELKAYTGQVPELFIKFNEKMLFLQKFS 274
BLAST of jgi.p|Trimin1|161947 vs. uniprot
Match: A0A835ZIL3_9STRA (Glycosyltransferase family 17-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIL3_9STRA) HSP 1 Score: 324 bits (831), Expect = 2.130e-107 Identity = 152/224 (67.86%), Postives = 184/224 (82.14%), Query Frame = 1 Query: 160 HPKVTVLRLDYAPPVADEEWCRER--SGSSSFMEEGCMDHWFREQHQRDYPKSYIVNKYADEDYIVVCSDVDEIPRKELLVSLKQHGNGQLHTPIYLHMAMLMYNMGWQTDEQWLRAFVINKEGFCNAASVDEMRRAEPYRVAPNGGWHCSYFLNSRDLARKIQAFSHQEYNKPEYTDTAHCQRCLLSGKDVLGRG-ELKAYTGQVPELFIKFNEKMLFLQKFS 822 HPK+TVL+L+ AP VAD +W +R S SSS+ME G MDHW+RE+HQRD+P SYI NKYA +YIVVCSDVDEIPRKE L+SLKQH GQL PI+LHM MLMYNM WQTDEQW+RAFVINK FC A S+DE+RRA+P RVAPNGGWHCS FL++ L RK+Q+FSHQE+NKPEYTD AH ++CL GKDVL RG +L+ Y G+VPE+F F++KMLFLQ+++ Sbjct: 141 HPKLTVLKLEDAPAVADHKWTLQRRASASSSYME-GSMDHWYREKHQRDHPHSYIKNKYASREYIVVCSDVDEIPRKEFLISLKQHCYGQLRDPIHLHMKMLMYNMKWQTDEQWMRAFVINKVSFCAATSIDELRRADPGRVAPNGGWHCSSFLSTAQLTRKLQSFSHQEFNKPEYTDAAHVRKCLSEGKDVLKRGGDLRKYAGEVPEVFRSFHKKMLFLQRYT 363
BLAST of jgi.p|Trimin1|161947 vs. uniprot
Match: A0A835Z442_9STRA (Glycosyl transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z442_9STRA) HSP 1 Score: 246 bits (628), Expect = 7.690e-78 Identity = 124/279 (44.44%), Postives = 177/279 (63.44%), Query Frame = 1 Query: 7 LIDVFCFNGEPILELRLEYLQDVVDEFVLVESKYTFSGKVKDTFY----CDDLVQHPKVTVLRLDYAPPVADEEWCRERSGSSSFMEEGCMDHWFREQHQRDYPKSYIVNKYADEDYIVVCSDVDEIPRKELLVSLKQHGNGQLHTPIYLHMAMLMYNMGWQTDEQWLRAFVINKEGFCNAASVDEMRRAEPYRVAPNGGWHCSYFLNSRDLARKIQAFSHQEYNKPEYTDTAHCQRCLLSGKDVLGRGELK----AYTGQVPELFIKFNEKMLFLQKF 819 LIDV +NGEP+LE RLEYL + VDE V+VESK T SG K ++ D L + P +T L++D PP+ + W ++ + + ++M G + WFRE +QRD+ YI KYA + YIV+CSDVDEIP +++ +LK + L TPIY H MYN+ W+TDE W +AFVIN G S+ ++R A P RV P+ GWH S+ L DL RKIQ+F+H E+NK ++T AH ++CL +G D+ R ++ A T +PE KF+EK++F Q++ Sbjct: 4 LIDVVSYNGEPVLEARLEYLSERVDELVIVESKCTHSGTPKPCYFGEKFSDILQKFPNITYLQIDSFPPLIPDVWMKKHA-ADAYMRGG-LGAWFRENYQRDFALPYIQKKYAGKQYIVMCSDVDEIPSLDVVNTLKAN-YASLSTPIYFHQRFYMYNLNWETDEFWSKAFVINDTGLTPEHSLSDIRTAPPKRVFPSAGWHLSFCLAKHDLIRKIQSFAHTEFNKDKFTSEAHVEKCLANGSDIFSRQHVRITRTATTDDLPEPIKKFHEKIMFAQRY 279
BLAST of jgi.p|Trimin1|161947 vs. uniprot
Match: A0A835Z8R4_9STRA (Glycosyl transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8R4_9STRA) HSP 1 Score: 181 bits (460), Expect = 2.690e-52 Identity = 97/254 (38.19%), Postives = 143/254 (56.30%), Query Frame = 1 Query: 4 KLIDVFCFNGEPILELRLEYLQDVVDEFVLVESKYTFSGKVKDTFYCD------DLVQHPKVTVLRLDYAPPVADEEWCRERSGSSSFMEEGCMDHWFREQHQRDYPKSYIVNKYADEDYIVVCSDVDEIPRKELLVSLKQHGN--GQLHTPIYLHMAMLMYNMGWQTDEQWLRAFVINKEGFCNAASVDEMRRAEPYRVAPNGGWHCSYFLNSRDLARKIQAFSHQEYNKPEYTDTAHCQRCLLSGKDVLGRG 741 K+ID +NGEP L+LRLE L DVVDEF++VE+ TFSG K Y D + +H K+TV+ +D P +++ +R + E + WFREQHQRD Y+ +KY D+ ++++ D DEIP+ ++ +++ L TP L M+M YN W D W+ AF +N G + R +P + P GWH SYF N+ D+ARK+++FSH E++ YTD A Q+CL G ++L G Sbjct: 18 KIIDAILYNGEPSLQLRLELLGDVVDEFLVVEAATTFSGLAKPFLYTDRHASVLEPYRH-KLTVMIVDSFPEPPEDDL--KRLLPRYWTSEDSVLSWFREQHQRDLIAPYVTDKYKDQPFVLLVCDADEIPQPHVVQHMRRSPELYHTLETPTALQMSMFFYNFKWLRDHPWMSAFAVNNRGLRAIHGQLSVTRQQPIQYIPAAGWHLSYFTNAIDIARKLKSFSHTEFSGDSYTDLAMVQKCLKEGCNMLMPG 268
BLAST of jgi.p|Trimin1|161947 vs. uniprot
Match: A0A835Z087_9STRA (Glycosyl transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z087_9STRA) HSP 1 Score: 170 bits (430), Expect = 6.250e-48 Identity = 100/291 (34.36%), Postives = 153/291 (52.58%), Query Frame = 1 Query: 4 KLIDVFCFNGEPILELRLEYLQDVVDEFVLVESKYTFSGKVKDTFYCDDLVQHP--------KVTVLRLDYAPPVADEEWCRERSGSSSFMEEGCMDHWFREQHQRDYPKSYIVNKYADEDYIVVCSDVDEIPRKELLVSLKQHGN--GQLHTPIYLHMAMLMYNMGWQTDEQWLRAFVINKEGF-CNAASVDEMRRAEPYRVAPNGGWHCSYFLNSRDLARKIQAFSHQEYNKPEYTDTAHCQRCLLSGKDVLGRG-----ELKAYT--GQVPELFIKFNEKMLFLQKFS 822 K+ID +NGEP L+LRLE L+ VVDEFVLVE+ TFSG K + D QH KVT++ + P +D++ RS S++ E WFREQHQRD Y+ +Y + Y+++ D DEIP +++ ++ + L P + M M YN W ++W AF +N G + E R + + GWH YF N+ +ARK++++SH EY+ ++TD A +RCL G D+L G E + + +P F ++++FLQ++S Sbjct: 4 KIIDTILYNGEPALQLRLEMLKHVVDEFVLVEAATTFSGVPKPFLFTD---QHAALLEPYRHKVTIIIVKSFPEPSDDDLRDLRS--RSYINEQSAPSWFREQHQRDLIAPYVAERYKGQRYVILVCDADEIPNPDIVHRMRSSVDLYHALDVPTAMFMRMFYYNFSWLRFQRWPMAFAVNDHGLQAIQGKLAETRLLQMQHIDA-AGWHLCYFFNAEGVARKLRSYSHTEYSGEKFTDVAMIRRCLREGCDILNAGSDTEDETRPFDDISSLPIELQNFQKQIMFLQEYS 288
BLAST of jgi.p|Trimin1|161947 vs. uniprot
Match: A0A835Z5R1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5R1_9STRA) HSP 1 Score: 144 bits (362), Expect = 7.530e-38 Identity = 85/284 (29.93%), Postives = 149/284 (52.46%), Query Frame = 1 Query: 4 KLIDVFCFNGEPILELRLEYLQDVVDEFVLVESKYTFSG-KVKDTFYCDDLVQ-----HPKVTVLRLDYAP-PVADEEWCRERSGSSSFMEEGCMDHWFREQHQRDYPKSYIVNKYADEDYIVVCSDVDEIPRKELLVSLKQHGNG--QLHTPIYLHMAMLMYNMGWQTDEQWLRAFVINKEGFCNAASVDEMRRAEPYRVAPNGGWHCSYFLNSRDLARKIQAFSHQEYNKPEYTDTAHCQRCLLSGKDVLGRGEL----KAYTGQVPELFIKFNEKMLFLQK 816 K+ D+F +NGEP+LELRL+ L DVVDEF+ VE++ SG + K Y + + K+T+L ++ P P A S + F E W+RE + R+Y Y+ +KY + ++ + DVDE+P ++ ++ +L TP +L M YN W+ + + A+ +N++GF + + R P GGWH SYFL+ + RK+++++H+EY+ ++ D + CL SG ++L + + + +P +F+ ++FLQ+ Sbjct: 1 KIADIFMYNGEPLLELRLKLLYDVVDEFICVEARDVHSGARQKQGLYVEQYAEVLKPYRDKLTILIIEEFPTPDAGTLEALHTSWTHIFPESAQA--WYRESYHRNYAADYVRSKYGNGAFVALVCDVDELPDPAIVREVRDSFGTYEKLSTPHHLVMEHFFYNFQWRYVDPFSNAYAVNEQGFRDMEGDLNLMRMSPNSGFRGGGWHGSYFLSVPGIVRKLESYAHREYSTEQFLDPNTIRGCLRSGCNILQQEPVWVLHEHNVSALPPPLQEFHCNLVFLQE 282
BLAST of jgi.p|Trimin1|161947 vs. uniprot
Match: A0A835ZCH0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCH0_9STRA) HSP 1 Score: 132 bits (333), Expect = 1.990e-33 Identity = 85/286 (29.72%), Postives = 145/286 (50.70%), Query Frame = 1 Query: 4 KLIDVFCFNGEPILELRLEYLQDVVDEFVLVESKYTFSG-KVKDTFYCDDLVQ-----HPKVTVLRL-DYAPPVADEEWCRERSGSSSFMEEGCMDHWFREQHQRDYPKSYIVNKYADED--YIVVCSDVDEIPRKELLVSLKQH--GNGQLHTPIYLHMAMLMYNMGWQTDEQWLRAFVINKEGFCNAASVDEMRRAEPYRVAPNGGWHCSYFLNSRDLARKIQAFSHQEYNKPEYTDTAHCQRCLLSGKDVLGRGEL----KAYTGQVPELFIKFNEKMLFLQK 816 K+ID+F +NGEP+LELRL+ L DVVDEF+ VE++ SG + K Y + K+T+L + D+ P A + S E W+RE + R+Y Y+ +KY D ++ + D+DE+P ++ +L T +L M YN W+ + + A+ +N++GF + R+ P GGWH SYFL+ + RK+Q+ +H+E++ ++ D +RCL SG ++L + + + +P +F+ ++FLQ+ Sbjct: 13 KIIDIFMYNGEPLLELRLKLLYDVVDEFICVEARDVHSGARDKQGLYVEQYAAMLEPYRDKLTILIIEDFPTPDAGTVEALQARWSHILPESAQA--WYRENYHRNYAADYVRSKYVQNDVPFVPLVCDLDELPDPAIVGVFGDSFATYEKLSTAHHLIMEHFFYNFRWRYTQPFSNAYAVNEQGFQDMHGDLNRMRSIPDPGFRGGGWHGSYFLSVGGIIRKLQSNAHREFSTEQFVDPLMIRRCLRSGCNILQQEPVWVLHEHNVSALPLPLQEFHRNLVFLQE 296
BLAST of jgi.p|Trimin1|161947 vs. uniprot
Match: A0A835Z660_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z660_9STRA) HSP 1 Score: 131 bits (329), Expect = 5.090e-33 Identity = 80/278 (28.78%), Postives = 140/278 (50.36%), Query Frame = 1 Query: 25 FNGEPILELRLEYLQDVVDEFVLVESKYTFSG-KVKDTFYCDDLV-----QHPKVTVLRLDYAPPVADEEWCRERSGSSSFMEEGCMDHWFREQHQRDYPKSYIVNKYADED--YIVVCSDVDEIPRKELLVSLKQH--GNGQLHTPIYLHMAMLMYNMGWQTDEQWLRAFVINKEGFCNAASVDEMRRAEPYRVAPNGGWHCSYFLNSRDLARKIQAFSHQEYNKPEYTDTAHCQRCLLSGKDVLGRGEL----KAYTGQVPELFIKFNEKMLFLQK 816 +NGEP+LELRL+ L D+VDEF+ VE++ SG + K Y + K+T+L +D P D S + + W+RE + R+Y Y+ +KY + ++ + DVDE+P ++ + +L TP +L M YN W+ E + A+ +N++GF + + R P GGWH SYFL+ D+ RK+++++ +E + ++ D +RCL SG ++L + + + +P +F+ ++FLQ+ Sbjct: 2 YNGEPLLELRLKLLYDMVDEFICVEARDVHSGSRQKQGLYVERFAGILEPYRDKLTILIIDEFP-TPDAGTLEALHTSWTHISPESAQAWYRENYHRNYAADYVHSKYVQSNVPFVALVCDVDELPDPAIVREFRDSFAAYEKLSTPHHLVMEHYFYNFRWRYVEPFSNAYAVNEQGFRDMEGDLNLMRMSPNPGFRGGGWHGSYFLSVPDIVRKLESYARREISTEQFVDPHMIRRCLRSGCNILQQEPVWVLHEHNVSALPVPLQEFHRNLVFLQE 278
BLAST of jgi.p|Trimin1|161947 vs. uniprot
Match: A0A6C0I2Y0_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0I2Y0_9ZZZZ) HSP 1 Score: 122 bits (305), Expect = 7.820e-28 Identity = 88/253 (34.78%), Postives = 128/253 (50.59%), Query Frame = 1 Query: 4 KLIDVFCFNGE-PILELRLEYLQDVVDEFVLVESKYTFSGKVKDTFYCDDLVQHPKVTVLRLDYAPPVADEEWCRERSGSSSFMEEGCMDHWFREQHQRDYPKSYIVN-KYADEDYIVVCSDVDEIPRKELLVSLKQHGNGQLHTPIY-LHMAMLMYNMGWQTDEQWLRAFVINKEGFCN-AASVDEMRRAEPYRVAPNGGWHCSYFLNSRDLARKIQAFSHQEYNKPEYTDTAHCQRCLLSGKDVLGRGELK 750 K++D F F E +L+ RL L VD FVLVES TF+G+ K FY ++ K + ++A + G HW E++QR+ I D DYI++ SDVDEIP + L++LKQ ++H L YN+ + +E W+RA VI E + N S D +R P + GGWH SYF N++ + KI+ FSHQE+N E T+ H Q+C+ + D+L R +K Sbjct: 309 KIVDAFMFYNELDMLKYRLTILAPHVDHFVLVESTRTFAGEPKPLFYKEN-----KDKEVFKEFASKIIHVVVDDFTVGPDC--------HWENEKYQRNCLHRGIEQLDLQDSDYIMI-SDVDEIPDPKTLIALKQE---EMHVQYANLKQDFYYYNLTAKMNEIWIRAKVITYEEYNNQGCSPDAIRLKTPPTMIEKGGWHLSYFGNTKMIQNKIRQFSHQEFNTEEITNADHLQQCIDNYTDILKRDGVK 544
BLAST of jgi.p|Trimin1|161947 vs. uniprot
Match: A0A6C0DKQ2_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0DKQ2_9ZZZZ) HSP 1 Score: 110 bits (274), Expect = 3.410e-25 Identity = 76/253 (30.04%), Postives = 123/253 (48.62%), Query Frame = 1 Query: 1 MKLIDVFCF-NGEPILELRLEYLQDVVDEFVLVESKYTFSGKVKDTFY--CDDLVQHPKVTVLRLDYAPPVADEEWCRERSGSSSFMEEGCMDHWFREQHQRDYPKSYI--VNKYADEDYIVVCSDVDEIPRKELLVSLKQ-----HGNGQLHTPIYLHMAMLMYNMGWQTDEQWLRAFVINKEGFCNAASVDEMRRAEPYRVAPNGGWHCSYFLNSRDLARKIQAFSHQEYNKPEYTDTAHCQRCLLSGKDV 729 MKLID F F N E +L+ RL Y +D+VD F+++E+ TFSG K ++ D H + +D PP M W RE +QR+ + V K ++D++ + DVDEI ++ L ++ H + +T LH YN+ + D+ L +I + G + ++R + Y + GWH SYF ++ + KI +FSH+EYNK E+T+ H + C+ +GK + Sbjct: 1 MKLIDAFIFYNEEKMLDYRLNYYKDIVDYFIIIEATKTFSGLDKPLYFNRIKDKYSHLNIIHYIVDEFPPN--------------------MSAWDREHYQRECIHKALLKVPKLRNDDWVHIA-DVDEISNRDKLETVLSDTYYSHPDRVGYT---LHFDNYYYNLTSKMDQPCLATKLI-RYGELKNKVIKDVRFSTSYPLLHQFGWHMSYFFSAEGIKNKIMSFSHEEYNKDEFTNKEHIEDCIKNGKSL 228 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|161947 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_1492 ID=mRNA_1492|Name=jgi.p|Trimin1|161947|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=825bp|location=Sequence derived from alignment at Contig_18:1237930..1238754+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGAAACTCATTGATGTGTTTTGTTTCAATGGCGAGCCAATACTAGAGCTback to top protein sequence of jgi.p|Trimin1|161947 >Trimin1|161947|e_gw1.18.68.1 ID=Trimin1|161947|e_gw1.18.68.1|Name=jgi.p|Trimin1|161947|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=275bp MKLIDVFCFNGEPILELRLEYLQDVVDEFVLVESKYTFSGKVKDTFYCDDback to top mRNA from alignment at Contig_18:1237930..1238754+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_1492 ID=mRNA_1492|Name=jgi.p|Trimin1|161947|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=825bp|location=Sequence derived from alignment at Contig_18:1237930..1238754+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_18:1237930..1238754+ >mRNA_1492 ID=mRNA_1492|Name=jgi.p|Trimin1|161947|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=825bp|location=Sequence derived from alignment at Contig_18:1237930..1238754+ (Tribonema minus UTEX_B_3156 )back to top |