Trimin1|353673|estExt_Genemark1.C_Ctg_1770028 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|353673
Unique NameTrimin1|353673|estExt_Genemark1.C_Ctg_1770028
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length165
Homology
BLAST of jgi.p|Trimin1|353673 vs. uniprot
Match: A0A835Z716_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z716_9STRA)

HSP 1 Score: 331 bits (849), Expect = 5.670e-115
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 0
Query:    1 MVQNLEPEPPPGCVQMSNIEQDLASALKRLQKLVALDQRGQMQELRSPEGAGIMCWFAAAHPDLFLDPTNHSFVVPPYVLRWGVCGRAKFNGLDLVQFDTSVVQNGRDFIGTVTELRLRLGALRWLFDACVSNAKYFRLVETDADVPRHISSSPDSAIAKSAAL 164
            MVQNLEPEPPPGCVQMSNIEQDLASALKRLQKLVALDQRGQMQELRSPEGAGIMCWFAAAHPDLFLDPTNHSFVVPPYVLRWGVCGRAKFNGLDLVQFDTSVVQNGRDFIGTVTELRLRLGALRWLFDACVSNAKYFRLVETDADVPRHISSSPDSAIAKSAAL
Sbjct:    1 MVQNLEPEPPPGCVQMSNIEQDLASALKRLQKLVALDQRGQMQELRSPEGAGIMCWFAAAHPDLFLDPTNHSFVVPPYVLRWGVCGRAKFNGLDLVQFDTSVVQNGRDFIGTVTELRLRLGALRWLFDACVSNAKYFRLVETDADVPRHISSSPDSAIAKSAAL 164          
BLAST of jgi.p|Trimin1|353673 vs. uniprot
Match: A0A835Z606_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z606_9STRA)

HSP 1 Score: 238 bits (608), Expect = 1.060e-77
Identity = 116/125 (92.80%), Postives = 117/125 (93.60%), Query Frame = 0
Query:   17 SNIEQDLASALKRLQKLVALDQRGQMQELRSPEGAGIMCWFAAAHPDLFLDPTNHSFVVPPYVLRWGVCGRAKFNGLDLVQFDTSVVQNGRDFIGTVTELRLRLGALRWLFDACVSNAKYFRLVE 141
            SNIEQDLASALKRLQKLVALDQRGQMQELRSPEGAGIMCWFAAAHPDLFLD TNHSFVVPPYVLRWGVCGRAKFNG DLVQFDTSVVQNGRDF G VTELRLRLGALRW FD C+S AKYFR VE
Sbjct:   36 SNIEQDLASALKRLQKLVALDQRGQMQELRSPEGAGIMCWFAAAHPDLFLDSTNHSFVVPPYVLRWGVCGRAKFNGFDLVQFDTSVVQNGRDFTGAVTELRLRLGALRWPFDECMSEAKYFRYVE 160          
BLAST of jgi.p|Trimin1|353673 vs. uniprot
Match: A0A835YTF1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTF1_9STRA)

HSP 1 Score: 156 bits (394), Expect = 2.730e-44
Identity = 74/121 (61.16%), Postives = 95/121 (78.51%), Query Frame = 0
Query:   17 SNIEQDLASALKRLQKLVALDQRGQMQELRSPEGAGIMCWFAAAHPDLFLDPTNHSFVVPPYVLRWGVCGRAKFNGLDLVQFDTSVVQNGRDFIGTVTELRLRLGALRWLFDACVSNAKYF 137
            S  + +LA AL RL +L ALD++GQ+QELRS +GAGIMCWFA AHP+L+LD TN  F  PP++L+WG+CG+A+FNG    +FDT+VVQ+ RDF G V ELRLRLGAL WLF+ C+ +A YF
Sbjct:  118 STSDPNLADALARLCRLEALDEQGQLQELRSDKGAGIMCWFATAHPNLYLDETNKVFTAPPFMLKWGLCGKAEFNGCYSARFDTAVVQHRRDFEGAVAELRLRLGALSWLFE-CMPDATYF 237          
BLAST of jgi.p|Trimin1|353673 vs. uniprot
Match: A0A836CPA1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPA1_9STRA)

HSP 1 Score: 137 bits (346), Expect = 1.360e-34
Identity = 72/128 (56.25%), Postives = 87/128 (67.97%), Query Frame = 0
Query:   17 SNIEQDLASALKRLQKLVALDQRGQMQELRSPEGAGIMCWFAAAHPDLFLDPTNHSFVVPPYVLRWGVCGRAKFNGLD----LVQFDTSVVQNGRDFIGTVTELRLRLGALRWLFDACVSNAKYFRLV 140
            S  EQ LA AL+ L  LV LDQ+GQ+QELRS  GAGIMCW+AAAHP L+LD  N  F+VPP  L W + G A F   D      +FDT+VVQ GRD    VTELRLRLGAL+WLF AC+  +  +++V
Sbjct:  662 STSEQYLARALELLLNLVVLDQQGQVQELRSDSGAGIMCWYAAAHPQLYLDAANEDFLVPPISLLWMLPGSATFTLYDRRPVAARFDTAVVQKGRDLAAAVTELRLRLGALKWLFAACLPRSTPYQVV 789          
BLAST of jgi.p|Trimin1|353673 vs. uniprot
Match: A0A835YUB2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUB2_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 1.410e-20
Identity = 51/97 (52.58%), Postives = 64/97 (65.98%), Query Frame = 0
Query:   43 QELRSPEGAGIMCWFAAAHPDLFLD----PTNHSFVVPPYVLRWGVCGRAKF-NGLDLVQFDTSVVQNGRDFIGTVTELRLRLGALRWLFDACVSNA 134
            QELRS +GAGIMCW+AAAHP L+LD    P + + + PP  LRW + GRA         +FD +V+Q+GR +   V EL LRLGAL+WLF ACV  A
Sbjct:  277 QELRSADGAGIMCWYAAAHPALYLDDAAAPCDDAPLAPPTALRWYMRGRADLARDGSAARFDAAVIQDGRRYDAAVQELGLRLGALKWLFAACVRPA 373          
BLAST of jgi.p|Trimin1|353673 vs. uniprot
Match: A0A835YV49_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV49_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 2.180e-6
Identity = 27/48 (56.25%), Postives = 33/48 (68.75%), Query Frame = 0
Query:   93 LDLVQFDTSVVQNGRDFIGTVTELRLRLGALRWLFDACVSNAKYFRLV 140
            L+LV      +QNG +F G VTELRLR+GA++WLFD CVS A  F  V
Sbjct:  154 LNLVDDPEDPLQNGSNFTGAVTELRLRMGAIKWLFDNCVSEADLFAWV 201          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353673 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A835Z716_9STRA5.670e-115100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z606_9STRA1.060e-7792.80Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YTF1_9STRA2.730e-4461.16Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CPA1_9STRA1.360e-3456.25Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YUB2_9STRA1.410e-2052.58Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YV49_9STRA2.180e-656.25Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 16..36

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_177contigContig_177:252573..254483 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353673mRNA_15697Tribonema minus UTEX_B_3156 mRNAContig_177 252573..254483 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|353673|estExt_Genemark1.C_Ctg_1770028 ID=Trimin1|353673|estExt_Genemark1.C_Ctg_1770028|Name=jgi.p|Trimin1|353673|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=165bp
MVQNLEPEPPPGCVQMSNIEQDLASALKRLQKLVALDQRGQMQELRSPEG
AGIMCWFAAAHPDLFLDPTNHSFVVPPYVLRWGVCGRAKFNGLDLVQFDT
SVVQNGRDFIGTVTELRLRLGALRWLFDACVSNAKYFRLVETDADVPRHI
SSSPDSAIAKSAAL*
back to top