mRNA_16997 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|353661
Unique NamemRNA_16997
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
[Close]
BLAST of jgi.p|Trimin1|353661 vs. uniprot
Match: A0A835ZCD8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCD8_9STRA)

HSP 1 Score: 1189 bits (3076), Expect = 0.000e+0
Identity = 624/624 (100.00%), Postives = 624/624 (100.00%), Query Frame = 1 
Query:    1 MSMPFWTAHRIKLVLPTASAATRREAVVAVLAICMPEGLNLPDSEMLAALERAAQSGGERVVCDPELRTGRWHSYETLYAQHVIDDFEAGTLPIGEGTKLASLLCRLLNCNQTRLSKKLKIGKRFYAHAPAREPTLEAIAAHRVRQRRVSELEEMFLMAEGQTVRGAATTPILSEKMQAEWRERFVAHAHTVNQKLRDAWSWNSNKRTGPSGSDAITKFLNTMVPQPGPQTGGDFALSPMAPLFLVQHTPEGSTSSHAPGAINNMVSTHDGVHSMKLYHPTQQXXXXXXXXXXAMSDFYSHVYHQHLVLPSAFNCPPNGANNTSTPNTWLMDLMDGLGGAGVNSSVSAAAAADAEFHALHADALHGDMGGDDGIDMWSSLGNNLASIAFQNSAALGEGGDARRLLAGDAQQQQQLSGAACTHFDNRPADLTHGGDAQTVMDMDGAHVGGAXXXXXXXXXXXXXXXXXXXDTEGGNELFQDFVGSFLQQVPFEAVDVWVPLARQETGGRVVLFHAGYFTNELEEWGEYSTNFSFEKGEGLPGRVFGSNTSEWQEDVHLLGHNMFLRLNGAIKTGIRTTFGVPVVSRRGVTFVIVFYSRKTVHVNPALRAFIERTVRSWKFDANVD 1872
            MSMPFWTAHRIKLVLPTASAATRREAVVAVLAICMPEGLNLPDSEMLAALERAAQSGGERVVCDPELRTGRWHSYETLYAQHVIDDFEAGTLPIGEGTKLASLLCRLLNCNQTRLSKKLKIGKRFYAHAPAREPTLEAIAAHRVRQRRVSELEEMFLMAEGQTVRGAATTPILSEKMQAEWRERFVAHAHTVNQKLRDAWSWNSNKRTGPSGSDAITKFLNTMVPQPGPQTGGDFALSPMAPLFLVQHTPEGSTSSHAPGAINNMVSTHDGVHSMKLYHPTQQXXXXXXXXXXAMSDFYSHVYHQHLVLPSAFNCPPNGANNTSTPNTWLMDLMDGLGGAGVNSSVSAAAAADAEFHALHADALHGDMGGDDGIDMWSSLGNNLASIAFQNSAALGEGGDARRLLAGDAQQQQQLSGAACTHFDNRPADLTHGGDAQTVMDMDGAHVGGAXXXXXXXXXXXXXXXXXXXDTEGGNELFQDFVGSFLQQVPFEAVDVWVPLARQETGGRVVLFHAGYFTNELEEWGEYSTNFSFEKGEGLPGRVFGSNTSEWQEDVHLLGHNMFLRLNGAIKTGIRTTFGVPVVSRRGVTFVIVFYSRKTVHVNPALRAFIERTVRSWKFDANVD
Sbjct:    1 MSMPFWTAHRIKLVLPTASAATRREAVVAVLAICMPEGLNLPDSEMLAALERAAQSGGERVVCDPELRTGRWHSYETLYAQHVIDDFEAGTLPIGEGTKLASLLCRLLNCNQTRLSKKLKIGKRFYAHAPAREPTLEAIAAHRVRQRRVSELEEMFLMAEGQTVRGAATTPILSEKMQAEWRERFVAHAHTVNQKLRDAWSWNSNKRTGPSGSDAITKFLNTMVPQPGPQTGGDFALSPMAPLFLVQHTPEGSTSSHAPGAINNMVSTHDGVHSMKLYHPTQQXXXXXXXXXXAMSDFYSHVYHQHLVLPSAFNCPPNGANNTSTPNTWLMDLMDGLGGAGVNSSVSAAAAADAEFHALHADALHGDMGGDDGIDMWSSLGNNLASIAFQNSAALGEGGDARRLLAGDAQQQQQLSGAACTHFDNRPADLTHGGDAQTVMDMDGAHVGGAXXXXXXXXXXXXXXXXXXXDTEGGNELFQDFVGSFLQQVPFEAVDVWVPLARQETGGRVVLFHAGYFTNELEEWGEYSTNFSFEKGEGLPGRVFGSNTSEWQEDVHLLGHNMFLRLNGAIKTGIRTTFGVPVVSRRGVTFVIVFYSRKTVHVNPALRAFIERTVRSWKFDANVD 624
[Close]
BLAST of jgi.p|Trimin1|353661 vs. uniprot
Match: D8LER0_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LER0_ECTSI)

HSP 1 Score: 373 bits (958), Expect = 6.340e-116
Identity = 256/648 (39.51%), Postives = 323/648 (49.85%), Query Frame = 1 
Query:  202 RTGRWHSYETLYAQHVIDDFEAGTLPIGEGTKLASLLCRLLNCNQTRLSKKLKIGKRFYAHAPAREPTLEAIAAHRVRQRRVSELEEMFLMAEGQTVRGAATTPILSEKMQAEWRERFVAHAHTVNQKLRDAWSWNSNKRTGPSGSDAITKFLNTMVPQPGPQTGGDFALSPMAPLFLVQHTPEGSTSSHAPGAINNMVSTHD---GVHSMKLYHPTQQXXXXXXXXXXAMSDFYSHVYHQHLVLPSAFNCPPNGANNTSTPNTWLMDLMDGLGGAGVNSSVSAAAAADA--EFHALHADALHGDMGGDD-----GIDMWSSLGNNLASIAFQNSAAL----------GEGGDARRLLAGDAQQQQQLSGAACTHFDNRPADLTHGGDAQTVMDMDGAHVGGAXXXXXXXXXXXXXXXXXXXDTEGGN--------------------------------------------------------------------ELFQDFVGSFLQQVPFEAVDVWVPLARQET-GGRVVLFHAGYFTN--ELEEWGEYSTNFSFEKGEGLPGRVFGSNTSEWQEDVHLLGHNMFLRLNGAIKTGIRTTFGVPVVSRRGVTFVIVFYSRKTVHVNPALRAFIERTVRSWKFDANVD 1872
            RTGRWHSYET+YAQ ++ DF+AGT+P+ EGTKL + LC +LNC+ +RLSKKLKIGK+++   P R    E IA HR  Q+R+S+LEEMFLMAE QT RG A T ILSE +Q EWRERF+ HAHTVNQKL++AW WNS++R     SDA++K         G   GG            VQ   +G+ +     A+ N++ +     G H M+ +       XXXXXXXX                                   +L  +    GGAG   S           + H   A  + G   G D     G ++WSSL NNLAS+ +QNS A+          G G     L  G     +  +    +  D     L  GG+  +  +      GG                     + GGN                                                                      F+DF+G+FL Q+PFEAVDVWVPL  Q+  G  VVLFHAGYFTN  ELEEWG+YSTNFSF +G+GLPGRV+ +N SEWQE+V  L H  FLRLNGA+  GIRT+FGVPVVSR GVTFVIVFYSR  V ++  ++AFIERTV +WKFDA VD
Sbjct:  153 RTGRWHSYETMYAQRIVADFDAGTMPLSEGTKLGNFLCNILNCSPSRLSKKLKIGKKYFQRCPGRPMGEEHIAKHREAQKRLSDLEEMFLMAESQTNRGVANTQILSECIQKEWRERFIGHAHTVNQKLKNAWDWNSSRRKAELSSDALSK---------GQAAGG------------VQG--QGTHNVSLVQAMGNVIQSWQQGQGQHGMQRFPSANGDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFLSAMTQQRGGAGAGFSWLEQQTGQGCQQRHGQGAPQIQGSHEGMDDMEGFGEELWSSLENNLASMGYQNSVAIEDMDPDLNNHGNGQWTGALAQGQGPLGENTTAGTSSTLDE--PQLFIGGNGSSNSNT----AGGPGVATLRDAGRGNPGRPAWQPSTGGNMGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSHRFEDFIGNFLDQIPFEAVDVWVPLCNQDQEGSEVVLFHAGYFTNVKELEEWGDYSTNFSFRQGQGLPGRVYANNKSEWQENVVNLNHAHFLRLNGAMNIGIRTSFGVPVVSRWGVTFVIVFYSRVAVQMDADMKAFIERTVSAWKFDATVD 771
[Close]
BLAST of jgi.p|Trimin1|353661 vs. uniprot
Match: A0A836CDJ8_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDJ8_9STRA)

HSP 1 Score: 276 bits (705), Expect = 6.330e-85
Identity = 143/214 (66.82%), Postives = 162/214 (75.70%), Query Frame = 1 
Query:  118 NLPDSEMLAALERAAQSGGERVVCDPELRTGRWHSYETLYAQHVIDDFEAGTLPIGEGTKLASLLCRLLNCNQTRLSKKLKIGKRFYAHAPAREPTLEAIAAHRVRQRRVSELEEMFLMAEGQTVRGAATTPILSEKMQAEWRERFVAHAHTVNQKLRDAWSWNSNKRTGP----SGSDAITKFLNTMVPQPGPQT--GGDFALSPMAPLFLVQ 741
            ++  SE L  L     +       D ELRTGRWH YET YAQH+++DFEAGTLPIGEGTKLA+LLCRLLNCNQTRLSKKLKIGKRFYAH P R  T EAIAAH VRQRR+SELEEMFLMAE QT RGA TTP LSEKMQ EWRERFV HAH++NQKL+DAWSWNS +R       + S AI K L+++ P     +  GGDF++SPMAPLFLVQ
Sbjct:   55 DMTQSEGLQVLPVEPHNNEPAENADTELRTGRWHHYETQYAQHLMEDFEAGTLPIGEGTKLATLLCRLLNCNQTRLSKKLKIGKRFYAHGPTRIRTPEAIAAHSVRQRRISELEEMFLMAEAQTARGALTTPGLSEKMQTEWRERFVGHAHSMNQKLKDAWSWNSKRRVSDLSTTNTSAAINKLLSSIAPTSSSNSTGGGDFSVSPMAPLFLVQ 268
[Close]
BLAST of jgi.p|Trimin1|353661 vs. uniprot
Match: A0A6H5KFM7_9PHAE (RING-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFM7_9PHAE)

HSP 1 Score: 223 bits (569), Expect = 1.650e-61
Identity = 136/351 (38.75%), Postives = 182/351 (51.85%), Query Frame = 1 
Query:  151 ERAAQSGGERVVCDPELRTGRWHSYETLYAQHVIDDFEAGTLPIGEGTKLASLLCRLLNCNQTRLSKKLKIGKRFYAHAPAREPTLEAIAAHRVRQRRVSELEEMFLMAEGQTVRGAATTPILSEKMQAEWRERFVAHAHTVNQKLRDAWSWNSNKRTGPSGSDAITKFLNTMVPQPGPQTGGDFALSPMAPLFLVQHTPE------GSTSSHAPGAINNMVSTHDGVHSMKLYHPTQQXXXXXXXXXXAMSDFYSHVYHQHLVLPSAFNCPPNGANNTSTPNTWLMDLMDGLGGAGVNSSVSAAAAADAEFHALHADALHGDMGGDDGIDMWSSLGNNLASIAFQNSAAL 1185
            E   + GG+R   + + RTGRWHSYET+YAQ ++ DF+AGT+P+ EGTKL + LC +LNC+ +RLSKKLKIGK+++   P R    E IA HR  Q+R+S+LEEMFLMAE QT RG A T ILSE +Q EWRERF+ HAHTVNQKL++AW WNS++R     SDA++K L+++ P  G Q     A+  +APL LV    +      G  +  A G     VS    V ++       Q           +         Q          PP   ++        MD M+G G                                    ++WSSL NNLAS+ +QNS A+
Sbjct:  139 EEDERKGGDR---EHQSRTGRWHSYETMYAQRIVADFDAGTMPLSEGTKLGNFLCNILNCSPSRLSKKLKIGKKYFQRCPGRPMGEEHIAKHREAQKRLSDLEEMFLMAESQTNRGVANTQILSECIQKEWRERFIGHAHTVNQKLKNAWDWNSSRRKAELSSDALSKLLSSITPSKGEQ-----AMGHLAPLMLVSQNGDNNNGNQGQATGGAQGQGTQNVSLAQAVGNVAFLSAMAQQRGGAGAGFSWLEQQTGQGCQQRYGQ----GAPPMQGSHEG------MDDMEGFG-----------------------------------EELWSSLENNLASLGYQNSVAI 436
[Close]
BLAST of jgi.p|Trimin1|353661 vs. uniprot
Match: D8LLI7_ECTSI (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLI7_ECTSI)

HSP 1 Score: 195 bits (495), Expect = 4.290e-53
Identity = 99/196 (50.51%), Postives = 130/196 (66.33%), Query Frame = 1 
Query:  172 GERVVCDPELRTGRWHSYETLYAQHVIDDFEAGTLPIGEGTKLASLLCRLLNCNQTRLSKKLKIGKRFYAHAPAREPTLEAIAAHRVRQRRVSELEEMFLMAEGQTVRGAATTPILSEKMQAEWRERFVAHAHTVNQKLRDAWSWNSN-KRTGPSGSDAITKFLNTMVPQPGPQTGGDFALSPMAPLFLVQHTPEG 756
            G R   + + RTGRWHS+ET+YAQ ++ DF+AGTLP+ EGTKL +LLC +LNC+ +RLSKKLKIGK+ +     R  T E IA HR  Q+R+S+LEEMFLMAE +  RG A    LSE +Q EWRER V HA  VNQ+L++AW WNS+ KR     ++  T  LN ++    P    D  ++ +APLFL  H  +G
Sbjct:  106 GAREGAETQTRTGRWHSFETMYAQRIVADFDAGTLPLCEGTKLGNLLCNILNCSPSRLSKKLKIGKKCFQQREDRPMTPEHIARHREAQKRLSDLEEMFLMAESRANRGMANAETLSECIQKEWRERLVEHALAVNQRLKNAWDWNSSRKRAERKRAELSTNALNKLLSTITPNQSSDSTVNHLAPLFLTNHNADG 301
[Close]
BLAST of jgi.p|Trimin1|353661 vs. uniprot
Match: A0A6H5JBQ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBQ8_9PHAE)

HSP 1 Score: 193 bits (491), Expect = 1.410e-52
Identity = 96/150 (64.00%), Postives = 116/150 (77.33%), Query Frame = 1 
Query: 1432 FQDFVGSFLQQVPFEAVDVWVPLA-RQETGGRVVLFHAGYFTN--ELEEWGEYSTNFSFEKGEGLPGRVFGSNTSEWQEDVHLLGHNMFLRLNGAIKTGIRTTFGVPVVSRRGVTFVIVFYSRKTVHVNPALRAFIERTVRSWKFDANVD 1872
            F+ F+ +FL QVPFEAVDVWVPL  R + G  VVLFHAGYFTN  EL+EWG+YSTNFSF +G+G+PGRVFGSN SE+ E+V  L  +MFLRLNGA K GI T+F +PVVSR GVTFVIVFY+R T+ ++   + FIE  VR W+ DA VD
Sbjct:  135 FEQFIANFLDQVPFEAVDVWVPLCDRDQEGSEVVLFHAGYFTNVKELDEWGDYSTNFSFRQGQGIPGRVFGSNQSEFHENVVNLDLSMFLRLNGARKIGIGTSFALPVVSRWGVTFVIVFYTRATIQLDAEKKVFIENMVRGWELDATVD 284
[Close]
BLAST of jgi.p|Trimin1|353661 vs. uniprot
Match: D8LLI8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLI8_ECTSI)

HSP 1 Score: 173 bits (438), Expect = 2.890e-45
Identity = 115/261 (44.06%), Postives = 149/261 (57.09%), Query Frame = 1 
Query: 1117 GIDMWSSLGNNLASIAFQNSAALGEGGDARRLL---------AGDAQQQQQ-LSG------AACTHFDNRPADLTHGGDAQTVMDMDGAHVGGAXXXXXXXXXXXXXXXXXXXDTEGGNEL-----FQDFVGSFLQQVPFEAVDVWVPLA-RQETGGRVVLFHAGYFTN--ELEEWGEYSTNFSFEKGEGLPGRVFGSNTSEWQEDVHLLGHNMFLRLNGAIKTGIRTTFGVPVVSRRGVTFVIVFYSRKTVHVNPALRAF 1827
            G D  SSL  NL S+A++NS  + E  D +            AG  QQQ+Q ++G      +A +   ++ + +  G ++ +          GA                     +GG  L     F+ F+ +FL QVPFEAVDVWVPL  R + G  VVLFHAGYFTN  EL+EWG+YSTNFSF +G+G+PGRVFGSN SE+ E+V  L  +MFLRLNGA K GI T+F +PVVSR GVTFVIVFY+R T+       AF
Sbjct:   56 GDDHLSSLEQNLTSLAYKNSMVI-EKMDQKPPFSASIEQWPQAGQGQQQEQGVTGGNPGKDSASSLNGSQMSAMDVGANSSSSTGTPSDVAAGAPPAGGGPAAAGTGEGKEKTGRDGGAALNDDHPFEHFIANFLDQVPFEAVDVWVPLCDRDQEGSDVVLFHAGYFTNVKELDEWGDYSTNFSFRQGQGIPGRVFGSNQSEFHENVVNLDLSMFLRLNGARKIGIGTSFALPVVSRWGVTFVIVFYTRATIQGEKRESAF 315
[Close]
BLAST of jgi.p|Trimin1|353661 vs. uniprot
Match: A0A7S3UXI5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UXI5_HETAK)

HSP 1 Score: 149 bits (375), Expect = 9.280e-38
Identity = 78/163 (47.85%), Postives = 104/163 (63.80%), Query Frame = 1 
Query: 1423 NELFQDFVGSFLQQVPFEAVDVWVPLARQE--TGGR------VVLFHAGYFTNE-----LEEWGEYSTNFSFEKGEGLPGRVFGSNTSEWQEDVHLLGHNMFLRLNGAIKTGIRTTFGVPVVSRRGVTFVIVFYSRKTVHVNPALRAFIERTVRSWKFDANVD 1872
            N+ FQD++  FL  +PFEA DVWVP+ +++  T G       V L HAG+F+       L+ WGEYST FSF +G GLPGR + S    W+ ++  +   MFLR  GA   GI T F VPV S RGVTFVIVFYS+  +  N  ++ FIERTV++W+FDAN++
Sbjct:   27 NQKFQDYIAKFLNSIPFEAADVWVPVIKRQPATDGAPAQASGVTLCHAGHFSQHQPSGNLKHWGEYSTAFSFPEGVGLPGRAYASRFPAWK-NIRAMSQEMFLRKKGADLCGINTAFAVPVTSCRGVTFVIVFYSQAELLENANVKLFIERTVQTWEFDANMN 188
[Close]
BLAST of jgi.p|Trimin1|353661 vs. uniprot
Match: A0A7S3UTL1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UTL1_HETAK)

HSP 1 Score: 97.1 bits (240), Expect = 1.260e-17
Identity = 50/127 (39.37%), Postives = 69/127 (54.33%), Query Frame = 1 
Query: 1498 LARQETGGRVVLFHAGYFTN--ELEEWGEYSTNFSFEKGEGLPGRVFGSNTSEWQEDVHLLGHNMFLRLNGAIKTGIRTTFGVPVVSRRGVTFVIVFYSRKTVHVNPALRAFIERTVRSWKFDANVD 1872
            L  +  GG VVL H G       L  W  +S  F F+   GL GRV G N  EWQ+DV  +    FLR  GA   G+RT FG+P+ S RG  FV+ FYS +       +  ++E +V+SWKF ++++
Sbjct:  309 LGGERPGGEVVLCHGGSVEKAPHLRGWAAFSQQFEFQDNVGLIGRVVGQNRCEWQQDVGSMLPYEFLRCEGARSFGLRTAFGIPIRSERGAKFVVCFYSTQRFARREEVARYLEGSVQSWKFSSSLE 435
[Close]
BLAST of jgi.p|Trimin1|353661 vs. uniprot
Match: A0A1Z5KJS1_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KJS1_FISSO)

HSP 1 Score: 93.2 bits (230), Expect = 5.110e-16
Identity = 62/153 (40.52%), Postives = 86/153 (56.21%), Query Frame = 1 
Query: 1432 FQDFVGSFLQQ--VPFEAVDVWVPLARQETG--GRVVLFHAGYFTN---------ELEEWGEYSTNFSFEKGEGLPGRVFGSNTSEWQEDVHLLGHNMFLRLNGAIKTGIRTTFGVPVVSRRGVTFVIVFYSRKTVH-VNPALRAFIERTVRS 1848
            F + + SF++Q  +PFE VD+WVP   +  G    + L+HAG  T           + E+GEYST FSF  G GLPGRV+ ++   W+  +H     +F R  GA   G++T FGVPVVS+     V+VFYS   VH + P L+  +ER V S
Sbjct:  402 FVEELVSFIEQENLPFEHVDLWVPSFAEGDGPGNEMRLYHAGQGTRGDLDASLYYRMCEYGEYSTKFSFAVGHGLPGRVYCTDKPSWERHIHEQDPKIFERAGGAKMYGVKTGFGVPVVSKSIGRIVVVFYS---VHDIQPDLQ-MMERIVAS 550
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353661 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZCD8_9STRA0.000e+0100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LER0_ECTSI6.340e-11639.51RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A836CDJ8_9STRA6.330e-8566.82RING-type domain-containing protein n=1 Tax=Tribon... [more]
A0A6H5KFM7_9PHAE1.650e-6138.75RING-type domain-containing protein (Fragment) n=1... [more]
D8LLI7_ECTSI4.290e-5350.51RING-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A6H5JBQ8_9PHAE1.410e-5264.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LLI8_ECTSI2.890e-4544.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S3UXI5_HETAK9.280e-3847.85Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S3UTL1_HETAK1.260e-1739.37Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A1Z5KJS1_FISSO5.110e-1640.52Uncharacterized protein n=1 Tax=Fistulifera solari... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_176contigContig_176:278339..292298 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|353661|estExt_Genemark1.C_Ctg_1760027
DescriptionRing finger
COG categoryS
Max annot lvl2759|Eukaryota
EggNOG OGs28HE3@1|root,2RTIT@2759|Eukaryota
Evalue1.04e-116
Seed ortholog2880.D8LER0
Hectar predicted targeting categoryother localisation
TranscriptId353983
TrackFilteredModels1
ProteinId353661
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353661gene_16997Tribonema minus UTEX_B_3156 geneContig_176 278339..292298 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353661Trimin1|353661|estExt_Genemark1.C_Ctg_1760027Tribonema minus UTEX_B_3156 polypeptideContig_176 278339..292298 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_16997_14exon_16997_14Tribonema minus UTEX_B_3156 exonContig_176 278339..278398 -
exon_16997_13exon_16997_13Tribonema minus UTEX_B_3156 exonContig_176 278826..278927 -
exon_16997_12exon_16997_12Tribonema minus UTEX_B_3156 exonContig_176 279572..279727 -
exon_16997_11exon_16997_11Tribonema minus UTEX_B_3156 exonContig_176 280094..280186 -
exon_16997_10exon_16997_10Tribonema minus UTEX_B_3156 exonContig_176 281232..281418 -
exon_16997_9exon_16997_9Tribonema minus UTEX_B_3156 exonContig_176 283426..283772 -
exon_16997_8exon_16997_8Tribonema minus UTEX_B_3156 exonContig_176 284494..284682 -
exon_16997_7exon_16997_7Tribonema minus UTEX_B_3156 exonContig_176 285678..285797 -
exon_16997_6exon_16997_6Tribonema minus UTEX_B_3156 exonContig_176 286445..286531 -
exon_16997_5exon_16997_5Tribonema minus UTEX_B_3156 exonContig_176 287150..287362 -
exon_16997_4exon_16997_4Tribonema minus UTEX_B_3156 exonContig_176 289592..289720 -
exon_16997_3exon_16997_3Tribonema minus UTEX_B_3156 exonContig_176 291325..291386 -
exon_16997_2exon_16997_2Tribonema minus UTEX_B_3156 exonContig_176 291524..291587 -
exon_16997_1exon_16997_1Tribonema minus UTEX_B_3156 exonContig_176 292233..292298 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_16997CDS_16997Tribonema minus UTEX_B_3156 CDSContig_176 292233..292298 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_16997 ID=mRNA_16997|Name=jgi.p|Trimin1|353661|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1875bp|location=Sequence derived from alignment at Contig_176:278339..292298- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGTCCATGCCGTTCTGGACCGCCCACCGCATCAAGCTGGTGCTGCCGAC
CGCGTCCGCCGCCACGCGGCGCGAAGCGGTAGTGGCGGTGCTGGCGATAT
GCATGCCGGAGGGCCTCAACCTGCCGGATTCGGAGATGCTGGCTGCGCTG
GAGCGGGCTGCGCAGAGCGGTGGGGAGAGGGTGGTCTGCGACCCGGAGCT
GCGGACGGGGCGGTGGCACTCGTATGAGACGTTATACGCGCAGCACGTCA
TTGACGATTTTGAGGCGGGCACGCTGCCAATTGGGGAGGGGACAAAGCTG
GCGAGCCTGCTGTGCCGTCTGCTGAACTGCAACCAGACGCGCCTCAGCAA
GAAGTTGAAGATCGGCAAGCGCTTCTACGCGCACGCGCCGGCACGAGAGC
CGACGCTCGAGGCCATTGCCGCGCACCGCGTGCGGCAGCGCCGCGTCAGC
GAGCTCGAGGAGATGTTCCTCATGGCGGAGGGGCAGACTGTGCGTGGAGC
GGCGACGACGCCCATTCTCAGCGAGAAAATGCAGGCGGAATGGCGCGAAC
GGTTCGTGGCGCATGCGCACACAGTCAACCAGAAGCTGCGCGACGCCTGG
AGCTGGAACTCCAACAAGCGGACGGGACCAAGTGGCAGCGACGCCATCAC
CAAATTCCTCAACACCATGGTGCCACAACCGGGCCCCCAGACGGGGGGCG
ACTTTGCGCTGTCTCCAATGGCGCCGCTCTTCCTTGTACAGCATACGCCA
GAAGGCTCAACGTCCAGCCATGCGCCGGGCGCTATCAACAACATGGTCAG
CACGCACGACGGCGTTCACTCCATGAAGCTTTACCACCCAACGCAGCAGC
AGCAACAGGCGCAGCAGCAGCAGGCGGCAGCCATGTCAGACTTCTACTCC
CATGTCTACCACCAGCATCTGGTGCTGCCGAGCGCCTTCAACTGCCCCCC
AAACGGCGCCAACAACACCTCCACCCCCAACACCTGGCTCATGGACCTCA
TGGACGGGCTCGGCGGCGCCGGCGTCAACAGCTCAGTGTCTGCCGCCGCA
GCAGCAGACGCGGAGTTCCACGCACTTCACGCAGACGCCCTGCACGGCGA
CATGGGGGGCGACGACGGCATAGACATGTGGAGCAGCCTCGGCAACAACC
TGGCGTCGATCGCATTCCAGAACAGCGCGGCGCTGGGAGAGGGGGGGGAC
GCGCGGCGTTTATTGGCGGGGGATGCGCAGCAGCAGCAGCAGTTGAGCGG
TGCTGCCTGCACGCACTTCGATAACAGGCCCGCCGACCTCACCCATGGAG
GCGACGCGCAAACGGTGATGGACATGGATGGTGCGCATGTAGGGGGGGCT
GCATCAGGGGGGGGCGGTGGGCTAAGCAGGGATGATGGCCCTGCAGAGGA
GGAGGAAGACACGGAAGGCGGTAATGAGCTCTTTCAGGACTTTGTCGGCA
GCTTCTTGCAACAGGTGCCATTTGAGGCAGTGGACGTCTGGGTGCCCCTT
GCACGGCAGGAGACAGGGGGGCGGGTGGTCCTGTTCCACGCTGGCTACTT
TACCAACGAGCTAGAGGAGTGGGGAGAATACAGCACCAACTTTAGCTTTG
AGAAGGGCGAGGGCCTCCCAGGCCGCGTGTTCGGCTCCAACACTAGCGAG
TGGCAAGAGGATGTGCACCTCCTGGGTCACAACATGTTTCTGCGACTCAA
CGGTGCCATCAAGACGGGCATCCGCACCACGTTTGGAGTGCCAGTTGTCA
GCCGCAGGGGCGTGACATTTGTCATAGTGTTCTACAGCCGCAAGACAGTA
CATGTGAACCCTGCGCTAAGGGCCTTCATTGAGCGCACCGTCCGCTCGTG
GAAGTTTGACGCAAACGTGGACTAG
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protein sequence of jgi.p|Trimin1|353661

>Trimin1|353661|estExt_Genemark1.C_Ctg_1760027 ID=Trimin1|353661|estExt_Genemark1.C_Ctg_1760027|Name=jgi.p|Trimin1|353661|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=625bp
MSMPFWTAHRIKLVLPTASAATRREAVVAVLAICMPEGLNLPDSEMLAAL
ERAAQSGGERVVCDPELRTGRWHSYETLYAQHVIDDFEAGTLPIGEGTKL
ASLLCRLLNCNQTRLSKKLKIGKRFYAHAPAREPTLEAIAAHRVRQRRVS
ELEEMFLMAEGQTVRGAATTPILSEKMQAEWRERFVAHAHTVNQKLRDAW
SWNSNKRTGPSGSDAITKFLNTMVPQPGPQTGGDFALSPMAPLFLVQHTP
EGSTSSHAPGAINNMVSTHDGVHSMKLYHPTQQQQQAQQQQAAAMSDFYS
HVYHQHLVLPSAFNCPPNGANNTSTPNTWLMDLMDGLGGAGVNSSVSAAA
AADAEFHALHADALHGDMGGDDGIDMWSSLGNNLASIAFQNSAALGEGGD
ARRLLAGDAQQQQQLSGAACTHFDNRPADLTHGGDAQTVMDMDGAHVGGA
ASGGGGGLSRDDGPAEEEEDTEGGNELFQDFVGSFLQQVPFEAVDVWVPL
ARQETGGRVVLFHAGYFTNELEEWGEYSTNFSFEKGEGLPGRVFGSNTSE
WQEDVHLLGHNMFLRLNGAIKTGIRTTFGVPVVSRRGVTFVIVFYSRKTV
HVNPALRAFIERTVRSWKFDANVD*
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mRNA from alignment at Contig_176:278339..292298-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_16997 ID=mRNA_16997|Name=jgi.p|Trimin1|353661|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=13960bp|location=Sequence derived from alignment at Contig_176:278339..292298- (Tribonema minus UTEX_B_3156 )
ATGTCCATGCCGTTCTGGACCGCCCACCGCATCAAGCTGGTGCTGCCGAC
CGCGTCCGCCGCCACGGTCTGATGCTTACGAGGGCCCGAACTGTGCTCCC
CCACATCATGGAAGGCGTGGCAGGTGCTCCTAAGCATGAGCGACGGAGGC
AGAAACGCCAGGATGTGAGGCGCAACGCTCAGAATCGGGTTGTCTGCCGC
CATGACGGGCATCTGCTGCTTACGCACGGGAGTCATCAGTGTCGAGATCT
ACGAAGATCTTGCAACGGCGCCAGTTGGCTTAATAGCTGGTTTCTCAACG
TCCGTTTTTTTGGCATACATACAGTATGGCCGCGGGTGAAGAGCTCATCA
AAAAGTTGTTTTCTCGGGGGTGCACAGCGGAGAAGGCGGCGGTCAGCAGG
GCAAAGCTTGAGAAGCCTGGTCGGCATACGACGACGTGGTGGCGGTACGC
TGCAGGGCCGCTTTGCTGGGTTGCTGGGGAGAGGAGGGTGAAAAACATTA
AATTTGCAGTATCCAGGATCCATTGACACCAGCTACCTACCTGCAGCCTT
GGCGTTATGGGACTTTGCAGATGAGGCCAGAGCAGCGGTGAAGACGCAGC
TTCGGTCGGGTGCGGCCTCTCCATTGCTTTTCGTTAACCCGCTGCCTCAG
ACGGTCGGCGAGAGGTCACCGTGCAGTGTCATAACCGGACGCCGCCACTA
GCGCAGAGTAGCGGCGCGAAGCGGTAGTGGCGGTGCTGGCGATATGCATG
CCGGAGGGCCTCAACCTGCCGGATTGTCGGCGCCAATGACCATCTCGGCT
CCCTCCCACTTGCAACACCAGCTTCATCAACAGCAGCAGCAGAGGCTCGG
AGGCAGCGACGGCGGCTCGCCACATGGATCCTCGCCTACGTTGTCGTCGT
CTGCGCCGCCAGCGGAGATGCTGGCTGCGCTGGAGCGGGCTGCGCAGAGC
GGTGGGGAGAGGGTGGTCTGCGACGTGTGTTCAATAAGGAGAGCCGATGT
CAGAACGCCGTGCGGGCATGCACTGCACGCCAGATGCATTTTCCAGCTGC
CGCTGACGGAGTGCCCAGTGTGCAGGGCGGATATGCGTGAAGGGTGAGTG
CTAGTGTTTTTGTGCTGCTTGTCGGCATATCGTCGGTGTTTGCGGCATTT
CCTCTGGCTCGGAGAGAGCTGGAGACACCACTGTTGACGCAGAGCTCAGA
AGCACGATGGTGGCGGAAAGAGGATTCAGAACACGGCATGGTTTCTCCAT
TTCGCCTCTGTGAAGCGTGCATATGCCATGGATATTTTTTTATCGCTGAC
ACATCATAGAGAGATGGATCTTTGCCAGCGCGGCAAACACCTTGTCAAGC
TCATCACGTCAAGCGAATGTTTTCATGACCACTAGTGATGTTATCACCTT
CCACGCTACGTATATTACCTCCAGAACAAATGAAAGTGTGGTTTCGTGGG
CATCTCTGGCACTACCTAGCAAGCTTCTCTGAACGAGCATGTGTGCACAT
TCGCAGCGCGAATGCAGCCTGGTGGCTTGTGACACTCATACTCATGTACG
CGTCAGCTTCATTATTACTGGTACGAATACGAGTCAGTGGTACACATCTG
ATCTACAGGAGAGCCACAAGATCCCGTTGTGCTGCCACTGCTGTGTGCAA
CTGCCACTTTTCACGCTAGGTCCACGTGCTGCACATGCGCTGTCGCACTC
ATGCACCATAAGCTGCTCCAGATCAAAGATGTTGATGTGTAGAAACTTTG
GAACAACAACTGCTGGGATGTTTGGCTGATGGTGTCGAAACCCCAGTACA
ACCACTGTTACTGTAAAATCGTTGCATGGGGAGCAGAGACTGAGTTGCTC
GTATGTGTGCAGCCCGCTCTACACCCGCGCTGCACACGCCACCAAATACA
CCTCCCGTGTGCTCTCGAAGCCTGTTTCGGCATGGGGTCTGCAGCTGAGA
CCGCGCGCTGCAAACGCGCAGCTCCATCGCTATATATGCCCGTAGCATCC
CTACTGTAGGAATGTTCGACAGCACTGATTGGACCGTGACCACCCCAAGG
ACCATTGCGCAAAATTCTCTATGCATTACTCAGGGGCTGCAGCCTGAGCT
TTGCACCATTCCGATATTGAACACCCGTGCATCGAACGCTGAAAGCTTGC
ACACAGAAGTCTGACTAATTGGATATGGTGGTACTGCTTGACTCGTGGCC
AATTGCTGCAGCAGCGGCGACCACTGTTATTGGTGGAAGGCACTTGTGGC
TAACCATGCCTTGTCATCTAGAGCTCTACGGTCTGTTGATTCGTTTTCAT
TTGCGGCGGTCATTTGCGAAGTCTGCGCCTCACCGTGGGTGTACTCTTTA
TGCAAGTTCTCGCTGAGGGGTGAACGCGAGCGCAGCTGGTCAACACAAGG
CTTGCAACACAGGTTCCTATGTCTGGTTGCAAAAGATCACAATGCTGAAG
TTTGCTGGATGACGTACACACACATTGACGTCCGCTGTTGCTGTTGGTTG
TGGGTGAGCAGGGATGGACTTCAAGTTCTGCCAGTTGAACCTCACGGAAG
TGGCGGAGGCGACGCTCCTCACGTGGAGCCGGAGCTGCGGACGGGGCGGT
GGCACTCGTATGAGACGTTATACGCGCAGCACGTCATTGACGATTTTGAG
GCGGGCACGCTGCCAATTGGGGAGGGGACAAAGCTGGCGAGCCTGCTGTG
CCGTCTGGTGAGTGATTGTGACCTGCAGTTGAAGTTGGTTTAGGCGTGTG
CGTTTTGGCAGAGTGAAAGTTGGATGCCGGGCAGGCGCGTTGCCTGCTGG
GTCACATGGGAGAAAGCCGGCGGGCAACCTGCCGCGGTCTGTGAATGAAG
TTTGTCAGGTGAAAGGCAGCATACAAGTCAAACACCTTTTAAGAAGGTGA
GTGATGTACCTCAAGTTGAAGACAATCAAAAGAAGTGTCATATGCGGCTT
GATATGGACAATGTCAGGCCTGGCACGGTCAACAGGGTGTGTGACAAGAG
GAAGGCAGCTGATGATCACCTGCAAAGTACAACTCCAACATTACCTAATG
AGATGCTGTACATGAAGTACTTGTGTGATGATTGACAACCAGGCACGCCT
GCTGCAAATCGAGGCAAGTGCAAATTTGTACGAAGCTGAACAGAGCAATT
GGGGCTTCAGTCAAACATTATCAACAGCGTAGTCAACGCACCGCTGCACG
TGCGCAATGCGCACAGCACATCATTTGACGAATTTGCGCATCTCCAACTG
TTCCGGGGACACCAAGCTAGTGAGCGCAGCACGCTGGACGGCAATGTGGG
CAAAATGAAACTTCAACTTCAACTGTGTGTTCTATGAGGGTGGCATCTGA
AGCTGCATGCGCAGAATGTAGTTGGCGACTTCCAGGCTTCCATGCTGTAG
GTTGGGCAAGGGAATGAGCTGACGTACTTGCTAGATCGGCCGGCGAATGA
CATACCTCGAAGTATATCAGGTTGCACATCTTCCACCAGTACAACTCCAG
TTCGGCACTTTTTGAAACGGTTTTCAAAGTAGGACAGGCAGCATATGGCT
GGCGTCATGGTGGAAGATGCACTGCTGGCCGTGGACAAGAGGCAGGTGGC
AAGTGCGCTGACTGCCGCTTTGTTTTCTGTGTGTACCATACACCTTCCCT
GAAGCTGAAAGTTCGTGGTTGCAGCCGTGGCATGGATGGTGTGTGCACTG
CTGTAGCACATGATAGGCAAGGACAAAGCGGACGTGCTGCGACGCACATA
GATGTCTGACCTCAAAACAGACACCACAGCCTGCTTCGCGTGCGGGCTGC
ATGCCACAAAACCCGCACTTCAACACCAACTTCAACTCAAGCTCCTTGCT
GTGACAACAGTCAGTTACAGTTTGCGACTGTGTTCTAAATGAGTGTCCTG
GGCAGGCATGCTGCTCGTGACGTTGATGAAAAATGAAGATTCAACCAAAC
GTCAAACAAACGCGATAATGATGCATCATGAGACATTGTAGGCGCTGCAC
AGCAATCATCTGAGCATTGAGACTGGGCACTGCACAAGCTTCTGGCTGTG
CTGCAGGCGCTGTCCAATGATGGGGCGCACAATCCCTATCGCGCCAACGC
ATGCCTTGTAAGAACCTGTTTGGAGGCACAAGTCCGGTAGTCTCTCATTT
GCCGCTGGAGCATGTGGCATCCTCCTGGTTGCTCTACAGCAGCACTGCGC
TCTTGCGCCTCTTCCGCCGTCAGCAGACAGCGCCGCCGCGATATGAAGCG
AGGGCTCAACTGAAGGCGCTAGTGATTTGGTGCCAACTTTGATGAACACG
TGCATGACAAATCACACCTATTTGCATCACGGTATTTCATGTGTTATTTG
GATATGCAATTTTGCGGGCTGTGCCTCATATACATGTATCGGCTGCTCAG
ACCTACCTGTACGTCAGAGCACTTGACATGCATTCTACAATAGACCTCCG
TGGCCGTTCTCTGACCGCTAATCCTGAGAATCGGTGGGGCTGATGCTCTC
TGAGTGTGAAAATTGTCGCACGATATCGTCTTGGTCGTCTGAAGCCATTG
GTGCAAACATTCACATAAGCATAGTGCGCACCAGAGCATTTGAATTTTGT
TGCTGCTTGAAAGAACCTGAAGTATCAAGCTTGAGCAGGCGGCAGCTGAT
GTTGTTGCTCCAACGCAGGCACAAACAAGCAATTTCTTGTTGCTGTCAAG
TTCACACACTCACACCCCTTCCCCCGCCGTTCCCCCGCGCGCAGCTGAAC
TGCAACCAAACGCATCTCAGCAAGAAGTCCAGGTGCTTTACACTTACACT
TTACACCAGTGCGCTACACGCCGCTACGCTATGCAAACAGCTGCCAGACA
CCAATTCTCCCCCCCCAACCCATACCCTCCTTCCCCCCACCCACCCTCCA
CACTCACCCTTTTCCCCCCATTCCCCCCGCATGCAGCTGAACTGCAACCA
GACGCGCCTCAGCAAGAAGTTGAAGATCGGCAAGCGCTTCTACGCGCACG
CGCCGGCACGAGAGCCGACGCTCGAGGCCATTGCCGCGCACCGCGTGCGG
CAGCGCCGCGTCAGCGAGCTCGAGGAGATGTTCCTCATGGCGGAGGGGCA
GACTGTGCGTGGAGCGGCGACGACGCCCATTCTCAGCGAGAAAATGCAGG
TATGTAGGTAACGGGGTGGGTGGGTATGTAAGGTATTCCAAGGTGCGTAG
AATGTGCGCGGGGCGGGGACGACGCCCATCCTCAGCGAGAAAATGCAGGT
ATGTACTGTAGGTGAATGGGTGGGGTTGGTATGTAACGTATTGCGAGATG
GGTAGGATTGTGCACGAACCGGCGACGACTTTATTGGCAGGTGTCGCAGT
GCTCAAAGGATGTGCAACACGCCGTACCTGGCCCTACATGATGCTTTGCA
TATTACCCGATATCCCACTAGCACATATGGTCTGCAGCTTCTATCATGCA
TGTTCTTGAGAAGCGGTACTGTTGCAAAACTGCTTCAGCGCGTCTCACGT
GTTTGCGTCAGACCGTCCATCACTTCATATAAAGCGCTGCACTTTGGGTT
CAGGGTTAGGTGAAGCTCAATTTGTGCGACAGGCGGAGTGAGCAGGTTGT
TTGTGTAGTCAACCCTAACGCCGTGCTCCTCAATGCAGCGGGCGGAGATG
GCGTGCGTGTAATCAGTCCCGACGTTGTCCCCGCGGATGTGCGCAAGGCG
GACTGACGTCAATGTGTGTTTGCATGTGTGGTCAGTGCTAACCATGTGCC
CTCGTGCTGCGCGACAGGCGGAATGGCGCGAACGGTTCGTGGCGCATGCG
CACACAGTCAACCAGAAGCTGCGCGACGCCTGGAGCTGGAACTCCAACAA
GCGGGTACGTAGGTATACGTGTGTGTTTGCCAGGGTATAGTGTAGGTATG
CATGCGTATACCATGTTGCTTCTGCCCCCCAACTTTTTTTCAAACTGCTT
GTGCAGTTTGAGCTCCTTGTCAAATCTGCAAGTATGTGGATTGTTTGGGT
TGATCGACAGGAGCCGGTTCTCCAACCAGCGGGCATACATGTATGTACGA
AGGTGTTGTGGATCTTGGTAGTTTGCATTTTGATATGAGCAGCTTTGATA
CACACGACGTTCTCGTACCTTGTACTGTAGTGTTGGCCAACGCATGCAAT
TCAACAAGCATGCAGTGCTCCTGGGTTTTCTTATCAAATTTACAATCCGC
ATAAATTGCCCCCCTGCTCGAGCACTCACTTGCTAAGCGTCGACGCCTTT
GACTTGCGGGTAATGAGTGCGTGCTGAGGCGCGTGCGCCCTACCGATTGA
TCAGAATTGGCCATCATTCAGCCGCCACTTCAACTTCGTGCACTGTCGAA
TGGCGCGCCACTTAAAGGCGCAACACCGCTGAAATTGTTTACAATTCATT
CGTCCATGACAACCCGTCTTCGACATTTCTCTTTGGTCAATTTGAGCGCA
CAATGCATGCAAGTAGGTGAGTGTCTCACTGGTGCACCATCTTCTGCGCA
GACGGGACCAAGTGGCAGCGACGCCATCACCAAATTCCTCAACACCATGG
TGCCACAACCGGGCCCCCAGACGGGGGGCGACTTTGCGCTGTCTCCAATG
GCGCCGCTCTTCCTTGTACAGGTGTGCGTCACATGTGAAGTTGAAGTACA
GAGTGCTGTAGTAGTAATTAAGACTTTTTAGTGTCAGGAGGCATGGCGCG
CAGGAGTTGCTGGGCTGCAGGCACCGCACAGGCATGCATAACATACACAT
GAAGTTAAATGTACAGGCGATTCTTCTTCTGTAGAGCGCCGGTGCATGGG
GTCTGTTGTCAAGCGTTCCCGCCAACATGCAAGACTACCTGACTGGCAGT
TCACTTCCTGTGAAAGCACGTGCACATACAGGGGGGGTCACGATATAAGA
GCGGGTCCGTCCCGCCAGCCTCACCGCTCTTATACTGTGACCGCTCCTAT
ATCGTCCTTGTGCTCAACTAGGGTTAGGGCTAACCCTAGGCTAACCCTAG
CCGTAGAACTAGGGTTTGAAGTAAATAGCTAGGGTTAGTGTGCCATCAGT
TGAAGTCGGCTATGAATTAAGCAACCGCACCGTGCGCTATACGCTGTGAC
TGATCGGTACGCGCTTGAGCGTTGTTGAATATCACGCAGAATCCGCTGAT
CAGGCATTGTTCGTGAGGCGGCAAGTGGTAGGTGGGCACGATATAAGAGC
GGTCTGCCCGCGCAACACCACATCGCTCTTATATCGACCAGATCCGTGTT
CAGCCGTCAGACCGCTCTTATACTGTGACCGCTCTTATATTGAGCGCTCT
TTTATCGTGACCCCCCCTGTATCATCATGAAGGCAGAAGCTTCGTACACT
CAGAACATCAAGAAGCGGGAGCTGCTTGCACGACAGAGACAATGCTCGCA
TGCCCGTTCCATTGCAACGCACGCCACAGGGCCCACCCTCCCTACTTTTG
TATCTGCTACAGGTTATCTGTCGTCTCAACTGCCTCATGTGCGTGCTACA
ATGTACATATTGCGCCTGCAAAGCAGCTTCACACTGCACGCTCGCACACC
TTCAGCATAACCTGCTGAACGACAATACGCAATGTATATGTCCCTTTGTT
TGATAACCTATTGCAGCATACGCCAGAAGGCTCAACGTCCAGCCATGCGC
CGGGCGCTATCAACAACATGGTCAGCACGCACGACGGCGTTCACTCCATG
AAGCTTTACCACCCAACGCAGCAGCAGCAACAGGCGCAGCAGCAGCAGGC
GGCAGCCATGTCAGACTTCTACTCCCATGTCTACCACCAGCATCTGGTGC
TGCCGGTACGCGCGGGGCTTGCTGTTAACTCAAAGTTGAACTTGAGGAAT
TAACTTGAAGTAGCAGCAGCAGCAGGCCGCGGCCATGTCAGACTTCTACT
CCCATGTCTACCACCAGCATCTGGTGCTGCCGGTACGCGCGGGCTTGAGT
TGAACTTGAAGTTTAAATTGAGGTATCACTTGAAGTAGCTGGCATCCAAG
AGCCCTTGCAACTTGGTGCATGATGTGCGTGATGATTGCGACCGTTGTGG
TGTCTCTGTTGCTGAGGCTTTCGGAGCCGCAATCAATGCTTCGCGTTCCG
TGAGGGTTGTTGCATGTTCATAGCTGTCGCAGGCAACCACAGCAGTGCTT
ATATGGTACGTGCCTCATTTGAGTGTTCACAACAAATGCAAATGATGCTG
GTGGATCTGTCTTGCTGCTTACGACACGCCCCTTGGCCCTGCAGTCACTG
CGCGTAGCTTCGCACAGCTACTGTATCAACGGCTGCTGCTAGTACCAACA
AGTGTTTCTTAGCATCACTTCAGGGCCCACCGCAGAGTGCTGTTCTAGTG
CTACAGTAGCCAGCTGCTGCAGCGGCTGTTAATCTTTGTTTGCAACTGCT
GTACCCTTCGAACGCACAACACAAGACTCCCACCCTCTCGCAGGCACTTG
CTCAGGAGTACCTACCGTACCTACTTACCCTAATCTAATATCACCCCCCC
CCCCCCCCCCCCCCCCCCCCCTGCAGAGCGCCTTCAACTGCCCCCCAAAC
GGCGCCAACAACACCTCCACCCCCAACACCTGGCTCATGGACCTCATGGA
CGGGCTCGGCGGCGCCGGCGTCAACAGCTCAGTGTCTGCCGCCGCAGCAG
CAGACGCGGAGTTCCACGCACTTCACGCAGACGCCCTGCACGGCGACATG
GGGGGCGACGACGGCATAGACATGTGGAGCAGCCTCGGCAACAACCTGGC
GTCGATCGCATTCCAGAACAGCGCGGCGCTGGGAGAGGGGGGGGACGCGC
GGCGTTTATTGGCGGGGGATGCGCAGCAGCAGCAGCAGTTGAGCGGTGCT
GCCTGCACGCACTTCGATAACAGGTGCGATTTTTTGCGTGTTTCGTTGAT
TTTTTCTGTGTGTCGGGCAAGCGGTGGCGGTGCGCAAGCTGCATGGCATG
GCTGCCTTGACATACACACACGTTCCTTTGGCGCATTTATGGGACGCGCG
GCGGTTGCTGTGGGGCGCGCAGCAGCAGCAGCTGAGCGGTGCTGCCTGCA
CGCACTTCGACGACAGGTGCGATCTGCGCGTTTTTGGAATTTTTTTGATA
CTGTGTGCGTCGGACAAGGGCATGCAAGCAGTGGCGCTGCGCGTGCCGCA
TGGCTACCTTGACATTTGCACACGTTCCTTTGGCGCATTTATGGGACGCG
CGGCGTTTGCTGTGGGGCGCGCAGCAGCAGCAGCTGAGCGGTGCTGCCTG
CACGCACTTCGACGACAGGTGCGATCTGCGCGTTTTTGGAAATCTTTGAT
ACTGTGTGCGTCGGACAAGGGCATGCAAGCAGTGGCGCTGCGCGTGCCGC
ATGGCTACCTTGACATTTGCACACATTCCTTTGGCGCATTCATGGGACGC
GCGGCGTTTGCTGTGGGGCGCGCAGCAGCAGCAGCTGAGCGGTGCTGCCT
GCACGCACTTCGACGACAGGTGCGATCTGCGCGTTTTTGGAATTTTTTTG
ATACTGTGTGCGTCGGACAAGGGCATGCAAGCAGTGGCGCTGCGCGTGCC
GCATGGCTACCTTGACATTTGCACACGTTCCTTTGGCGCATTCATGGGAC
GCGCGGCGTTTGCTGTGGGGCGCGCAGCAGCAGCAGCTGAGCGGTGCTGC
CTGCACGCACTTCGACGACAGGTGCGATCTGCGCGTTTTTGGAATTTTTT
TGATACTGTGTGCGTCGGACAAGGGCATGCAAGCAGTGGCGCTGCGCGTG
CCGCATGGCTACCTTGACATTTGCACACGTTCCTTTGGCGCATTCATGGG
ACGCGCGGCGTTTGCTGTGGGGGGGGGGAGCGCAGCAGCAGCTGAGCGGT
GCTGCCTGCACGCACTTCGACGACAGGTGCAGCTCGCGCTTGTGCGTTTA
TTCGTTGTCGGTGTGCGTCGATAGCGCGGCTTGTGCGCGTTTGTGTTGTT
ATTTTTGCACAAACGCACGCAAGCAGTGTCGGTGCTGAGCTGAAAAGCGT
GACGCGTGCTGACAGACAGACGCCTTAGGGTTGGGGTTAGGGTCACGCAC
TCATGCCTTGGCCGCATTCGCCGCGCTGAGCTACATCACGCGACACCTGT
GCAATCATGAACCAAACTCAACATGTACGGTAGGTATTCATGCACCGTTT
ATAGAAGTACACATGCCTACCAGCACACCTGCCTGTGCACAGAGGAGCTG
GCCGCGGTTCATGTTTGTGCGCCCAGCCTTGTCAATGTCATTCCTTCAGG
TGTTGATTTTGGTGCCCAGGTAGCTGCCTTGCGCAGTGTGTGTCACAACA
ATGCCACATTCGTGCACGAAGCGCACCCGCATTAGTGGCGTATTATGCAA
GGCTTTCTAGAGGCGGCGCCTCGTCCAACAGACGCAAATGAGGTACCTCC
GCTCGAGGCACCCCCCTGATGCAACATGGGACAGTGTTCATACCTACCCT
CAAGCAAGTGTGTATGTACATACCTACCTTAGGCTACCTACTCTCGAGCA
GCAAAAGACATTGGCTCGCTGGATTGCCATATTTTTATGATGATCACACT
CTCTCAGTGTGCCCCACAGACAAACGCTATGTTGATGCTAAGGGTGTCGA
GGGCGCAGCGTCAAGTGTAACTTCAACATCAACATGGAGCAGCACAGCAG
CTAAACTACACGTGCGCTTTGTACTCATCAGCTAAACTGACACGTGCGCT
GTGTACTCATCTCGCATCATAGAATGGACCGCTGACCCCCTCCCTGAGTG
CAACGGGCACAAATGAGGGGGATATCTCCCCCTGCAGAGCACGACATTGA
GGGGGGCATCTCCCCCTGCAGAACACAACATGGTAACTGACGTAACCGTC
ACCCTGTCGCCCATGTACCTTGCATCCCAGGCCCGCCGACCTCACCCATG
GAGGCGACGCGCAAACGGTGATGGACATGGATGGTGCGCATGTAGGGGGG
GCTGCATCAGGGGGGGGCGGTGGGCTAAGCAGGGATGATGGCCCTGCAGA
GGAGGAGGAAGACACGGAAGGCGGTAATGAGCTCTTTCAGGACTTTGTCG
GCAGCTTCTTGCAACAGGTATGTAGTAGCTGGCTGAAGACAGTGCTTGTT
ACTGTGCTGATTGGTCGCTTGACCTACATGATGCAACTTCGCGAGCAACA
TGTGCCGGCAGCTTTTTGCGGCAAGTACTAGCTGGTTGAAGACGGTGCTT
GTTACTCAGTTGATCAGTCGTGCGTGTGATTTTTTGTTTGCGAGCGGCAG
GTGTCGGCGGCTTTGATCATTGGTCGTGCACATGATTTTCCGTTTGCAAT
CAGCATGTGCCGGCAGCTTCTTGCAGCAGGTAGTAGCCAGTGGAAGATGG
TTTTTGTTACTGTGCCGATCGGTCATGTACTTGATGCATTGATGCAAACG
GCTTGTGATGAGCGGTTCTGGAGGTGCTTGTAGGAAATATGCATACCTCG
TTTGTCTGAGCATGACTTTGCACATACTCCAGAGGCCTGAGCTTACCAAT
GAGGGTAAGCTGATGCCTTGGTTTATTTATGAACGACAGGCATTGTGGCA
GAGCGTAAGTAGTGCTCTCACACACTGCCTCCAAACAAATATTTCCCTGA
CATCAAGTGCAACGTCCTGCTGACGTTATCTCAAATTCATCCTTACCCCG
CCTTACAGCTCGCTGGCCGTAGGCGTCTTGTGTGCGCTGTGCCTTACCCT
ACCTAGCCTTAACCCTAAGAGCAGCCAACTGGTACTACCTTGACGTGTGT
CTTTGCAACAAGGGCATTGCATGAACAACAACGCAGTTTGTAATAATATT
ACCCCTGATGCGCACTCAAACGCTCTGGGCTCTCGTGTAGCACTTTGCTT
TTACATATTCAATAGCTGCAGACGGCTTCGGTGCGCTGTTAACAGTAGCT
CTAGTCTCCATGTAGTGTGCCACAAGGCTCCAACTGAAGTGTACAGTACG
GTGACTGTCTGGATGTGTAATTGATGTATTACATCGATGTACGTGTCAGC
GCTCAACATTGTGGTGCTCCCATCCGCCTTCCTTTCTCAAGGTACCCAGA
GTCTGTCACGTATTGTGCAACTGACAGGAGCTGCACTTTTCGCCTTGTTG
GTTTTCACTCAGGTGCCATTTGAGGCAGTGGACGTCTGGGTGCCCCTTGC
ACGGCAGGAGACAGGGGGGCGGGTGGTCCTGTTCCACGCTGGCTACTTTA
CCAACGTCAAGGCAAGTTTTTCATTATTGGTGGCTTGATAAATGCTTAAA
TTTTGTGCATGGCGAGTGTGAAGGTCTGGCAGTGGGCGGCTGCGCCTCTT
GTGCTATGCTTGCTGCTGCCACTATTTACCCAGGCAAGTTGTGATGGTGG
CTAACATCTGTGGACGATTGGTGTTTATGCTGCATCCTTGGAAACGATTT
GACAGCGCATAGCGCCATCACTGCGGTGTGTGGTGGACACTCGAGCGGCA
CTCGCTCCTCATGTCGGAACAACAACACATACAGCACCAACTTCAGCTTT
GAGAAGTGCACATGACTCTGAATTTATTCACATGATGTTGCTGCCTGGCA
TGCCTCTCGTTGCGTTTGCAGGAGCTAGAGGAGTGGGGAGAATACAGCAC
CAACTTTAGCTTTGAGAAGGGCGAGGGCCTCCCAGGCCGCGTGTTCGGCT
CCAACACTAGCGAGTGGCAAGAGGATGTGCACCTCCTGGGTCACAACATG
TTTCTGCGACTCAACGGTGCCATCAAGGCAAGTTAAGCTTGAGTTTTCTG
CCCACGCGCGGCGACAATCTGAGCTTTGCTGCAGAAGTGCTGTTGGTCAT
AGTGCTATATGATATGCAAGTGTTTGCTTGAGCAGTGCCGCCTATCCGAG
AGTGCTCAATTGGCATTTTACTACAAGTCCAATTTTCATATTGGACTTGT
TTCACAAAGCACAAAAGGTGACGCTAGAACAGTTGCTATATATGGACCCG
AGAACACAGTGGCTATATGTTAATGCTTTATAGAAATGCCTTTCAAGGTT
CAATTGCATCACGTCAGCTGCCAGGGCACAGCCTCTTTTCTGCAACAGAT
GTCTTGGTGTTGCTGCGGTTATGGTGTTGCTGGGCAAAGACCAGGGATTT
GTTTGTTGTATGTTCAACACTTGATCATGTGCTGCTTGAATAAGCTGGGC
TTCTTGGCCAATGCTTTATCATCTCAAGCAGCCAAGCAGATGTGAATGTT
GCGTGAAGATGTGTTCATGTCAGTCAAACAAAAAAAAGGGACATGGCACA
TTGGCGTTGTGCACTTTGCGCCATGTTGCCAGCGTGGACACGCGCAAAGG
CAACTCTGCAGCATGTCTCAACCGCTGCTCGCTGCTGCTTGTGCTGATCG
CTGCTGCTGCGTGCTGTGCAGACGGGCATCCGCACCACGTTTGGAGTGCC
AGTTGTCAGCCGCAGGGGCGTGACATTTGTCATAGTGTTCTACAGCCGCA
AGACAGTACATGTGAACCCTGCGGTGAGTACATGTGTACCCCATTTTTGT
TCATCGTTTAAACCCCATGGCAAATACATGTGAATCCTGTGGTACGTGCG
TGATCCTCCCCCGTGGAGCTTTTGTAGACATGAAACCAGTTTGAGCTACT
TGCTTGCTGTGGGGCATGCTGGTTTGATCAAAAGCCAGCATCATGCAGCC
AAAAACAACAAAAAGCACGGCGCACACCGCTGCTGCAGTGATGGTAGTTG
TACTAGGGCCACCACAAAGCTGCATCAGTACGGTCGGCCCAAGCTGTGAA
TGCCAGCACTTGTCACCCACTGTTGCAGTCATTGCTTCAACTGCACCTAC
CTCTGCATAGTACTGCACCCACTGCAAATGCAGTTGATGATCCACTTGTC
GAGATTCTAATTTCACCCCCCTGCTACCCCCGTTGTCTGCATCCTTGCAG
CTAAGGGCCTTCATTGAGCGCACCGTCCGCTCGTGGAAGTTTGACGCAAA
CGTGGACTAG
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Coding sequence (CDS) from alignment at Contig_176:278339..292298-

>mRNA_16997 ID=mRNA_16997|Name=jgi.p|Trimin1|353661|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1875bp|location=Sequence derived from alignment at Contig_176:278339..292298- (Tribonema minus UTEX_B_3156 )
ATGTCCATGCCGTTCTGGACCGCCCACCGCATCAAGCTGGTGCTGCCGAC
CGCGTCCGCCGCCACGCGGCGCGAAGCGGTAGTGGCGGTGCTGGCGATAT
GCATGCCGGAGGGCCTCAACCTGCCGGATTCGGAGATGCTGGCTGCGCTG
GAGCGGGCTGCGCAGAGCGGTGGGGAGAGGGTGGTCTGCGACCCGGAGCT
GCGGACGGGGCGGTGGCACTCGTATGAGACGTTATACGCGCAGCACGTCA
TTGACGATTTTGAGGCGGGCACGCTGCCAATTGGGGAGGGGACAAAGCTG
GCGAGCCTGCTGTGCCGTCTGCTGAACTGCAACCAGACGCGCCTCAGCAA
GAAGTTGAAGATCGGCAAGCGCTTCTACGCGCACGCGCCGGCACGAGAGC
CGACGCTCGAGGCCATTGCCGCGCACCGCGTGCGGCAGCGCCGCGTCAGC
GAGCTCGAGGAGATGTTCCTCATGGCGGAGGGGCAGACTGTGCGTGGAGC
GGCGACGACGCCCATTCTCAGCGAGAAAATGCAGGCGGAATGGCGCGAAC
GGTTCGTGGCGCATGCGCACACAGTCAACCAGAAGCTGCGCGACGCCTGG
AGCTGGAACTCCAACAAGCGGACGGGACCAAGTGGCAGCGACGCCATCAC
CAAATTCCTCAACACCATGGTGCCACAACCGGGCCCCCAGACGGGGGGCG
ACTTTGCGCTGTCTCCAATGGCGCCGCTCTTCCTTGTACAGCATACGCCA
GAAGGCTCAACGTCCAGCCATGCGCCGGGCGCTATCAACAACATGGTCAG
CACGCACGACGGCGTTCACTCCATGAAGCTTTACCACCCAACGCAGCAGC
AGCAACAGGCGCAGCAGCAGCAGGCGGCAGCCATGTCAGACTTCTACTCC
CATGTCTACCACCAGCATCTGGTGCTGCCGAGCGCCTTCAACTGCCCCCC
AAACGGCGCCAACAACACCTCCACCCCCAACACCTGGCTCATGGACCTCA
TGGACGGGCTCGGCGGCGCCGGCGTCAACAGCTCAGTGTCTGCCGCCGCA
GCAGCAGACGCGGAGTTCCACGCACTTCACGCAGACGCCCTGCACGGCGA
CATGGGGGGCGACGACGGCATAGACATGTGGAGCAGCCTCGGCAACAACC
TGGCGTCGATCGCATTCCAGAACAGCGCGGCGCTGGGAGAGGGGGGGGAC
GCGCGGCGTTTATTGGCGGGGGATGCGCAGCAGCAGCAGCAGTTGAGCGG
TGCTGCCTGCACGCACTTCGATAACAGGCCCGCCGACCTCACCCATGGAG
GCGACGCGCAAACGGTGATGGACATGGATGGTGCGCATGTAGGGGGGGCT
GCATCAGGGGGGGGCGGTGGGCTAAGCAGGGATGATGGCCCTGCAGAGGA
GGAGGAAGACACGGAAGGCGGTAATGAGCTCTTTCAGGACTTTGTCGGCA
GCTTCTTGCAACAGGTGCCATTTGAGGCAGTGGACGTCTGGGTGCCCCTT
GCACGGCAGGAGACAGGGGGGCGGGTGGTCCTGTTCCACGCTGGCTACTT
TACCAACGAGCTAGAGGAGTGGGGAGAATACAGCACCAACTTTAGCTTTG
AGAAGGGCGAGGGCCTCCCAGGCCGCGTGTTCGGCTCCAACACTAGCGAG
TGGCAAGAGGATGTGCACCTCCTGGGTCACAACATGTTTCTGCGACTCAA
CGGTGCCATCAAGACGGGCATCCGCACCACGTTTGGAGTGCCAGTTGTCA
GCCGCAGGGGCGTGACATTTGTCATAGTGTTCTACAGCCGCAAGACAGTA
CATGTGAACCCTGCGCTAAGGGCCTTCATTGAGCGCACCGTCCGCTCGTG
GAAGTTTGACGCAAACGTGGACTAG
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