mRNA_15876 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|353616
Unique Name	mRNA_15876
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|353616 vs. uniprot
Match: A0A836CJN0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJN0_9STRA)

HSP 1 Score: 1008 bits (2605), Expect = 0.000e+0
Identity = 761/761 (100.00%), Postives = 761/761 (100.00%), Query Frame = 2

Query:   20 MLVGGPFAIGAPSGALAPHKPASQQXXXXXXXXXXXXXXXLAHPLPDQQPSARKHKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAPLLGHLLPAAAAAVDRGAVPDEPWQRRHRQPHSPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPAPANTSRCEERDPPAPRLASLLPAAAIADAIVHXXXXXXXXXXXXXXRWQPVLTPHQRLQXXXXVEEWGQQRXXXXXXADSDEQPGRKRSRTDAEPAHRNGGSSARRDGGAAVRPALPLTMSGNANGASAAQQQDGKRKGKFSAEESARVEASIRDYCALHNVSVERLCQDGGHKGEIRGAWHIIAEALPERTVQARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSGCKGSADPPRGPWSDDEIQQLRQLVRVHGPKWRLIETHIGRISEACRDKYRELNPEEHRTGLWDRAEEERLHELLWDFFKVAPDTRLSDLPKTEIPWDFISAQHGTRSRVMCLKKMENIMSAEFQREARARGESRAHTDLRLVEELLETGAEDESEITWAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLALSSSSGGGAPALHLACRAIGRKAVSKRRGDAHKHTKARTSTQFIITAPDMNLALYLSHPIASTRWIRLRSRIPGSAAMSFVAALRECRAGLLDAVHAIDNGERPRAKGKRHKTPQQRVVGSLPGGVSDXXXXXXXXXXYYGDE 2302
            MLVGGPFAIGAPSGALAPHKPASQQXXXXXXXXXXXXXXXLAHPLPDQQPSARKHKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAPLLGHLLPAAAAAVDRGAVPDEPWQRRHRQPHSPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPAPANTSRCEERDPPAPRLASLLPAAAIADAIVHXXXXXXXXXXXXXXRWQPVLTPHQRLQXXXXVEEWGQQRXXXXXXADSDEQPGRKRSRTDAEPAHRNGGSSARRDGGAAVRPALPLTMSGNANGASAAQQQDGKRKGKFSAEESARVEASIRDYCALHNVSVERLCQDGGHKGEIRGAWHIIAEALPERTVQARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSGCKGSADPPRGPWSDDEIQQLRQLVRVHGPKWRLIETHIGRISEACRDKYRELNPEEHRTGLWDRAEEERLHELLWDFFKVAPDTRLSDLPKTEIPWDFISAQHGTRSRVMCLKKMENIMSAEFQREARARGESRAHTDLRLVEELLETGAEDESEITWAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLALSSSSGGGAPALHLACRAIGRKAVSKRRGDAHKHTKARTSTQFIITAPDMNLALYLSHPIASTRWIRLRSRIPGSAAMSFVAALRECRAGLLDAVHAIDNGERPRAKGKRHKTPQQRVVGSLPGGVSDXXXXXXXXXXYYGDE
Sbjct:    1 MLVGGPFAIGAPSGALAPHKPASQQXXXXXXXXXXXXXXXLAHPLPDQQPSARKHKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAPLLGHLLPAAAAAVDRGAVPDEPWQRRHRQPHSPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPAPANTSRCEERDPPAPRLASLLPAAAIADAIVHXXXXXXXXXXXXXXRWQPVLTPHQRLQXXXXVEEWGQQRXXXXXXADSDEQPGRKRSRTDAEPAHRNGGSSARRDGGAAVRPALPLTMSGNANGASAAQQQDGKRKGKFSAEESARVEASIRDYCALHNVSVERLCQDGGHKGEIRGAWHIIAEALPERTVQARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSGCKGSADPPRGPWSDDEIQQLRQLVRVHGPKWRLIETHIGRISEACRDKYRELNPEEHRTGLWDRAEEERLHELLWDFFKVAPDTRLSDLPKTEIPWDFISAQHGTRSRVMCLKKMENIMSAEFQREARARGESRAHTDLRLVEELLETGAEDESEITWAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLALSSSSGGGAPALHLACRAIGRKAVSKRRGDAHKHTKARTSTQFIITAPDMNLALYLSHPIASTRWIRLRSRIPGSAAMSFVAALRECRAGLLDAVHAIDNGERPRAKGKRHKTPQQRVVGSLPGGVSDXXXXXXXXXXYYGDE 761

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BLAST of jgi.p|Trimin1|353616 vs. uniprot
Match: A0A6T7HTI9_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A6T7HTI9_9STRA)

HSP 1 Score: 125 bits (315), Expect = 2.930e-27
Identity = 78/230 (33.91%), Postives = 108/230 (46.96%), Query Frame = 2

Query:  986 GKFSAEESARVEASIRDYCALHNVSVERLCQDGGHKGEIRGAWHIIAEALPERTVQARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSGCKGSADPPRGPWSDDEIQQLRQLVRVHGPKWRLIETHIGRISEACRDKYRELNPEEHRTGLWDRAEEERLHELLWDFFKVAPDTRLSDLP------KTEIPWDFISAQHGTRSRVMCLKKMENIM 1657
            GKFS EES  V   I +YC    +S  RLC +  HK E++GAW  I+  LP RTVQ+                                               G +      RGPWSD+E+Q L QLV   G KW  I+  +GR +++CRDKYRE+N E +  G W   E E L  L+ +  KV P+T ++++       +  +PW  IS Q G RSR+ C KK + ++
Sbjct:   71 GKFSPEESEIVRRGIEEYCERKGISTARLCSECDHKSELKGAWMEISRNLPLRTVQSVYRH-------------------------------------------GLRQLHPFSRGPWSDEEVQTLLQLVTRMGKKWSTIQQTLGRTADSCRDKYREINSE-YIKGRWKENETELLLRLIREQLKVDPNTEVAEMANMVESQQIVLPWSTISKQIGKRSRLSCFKKWQKLI 256

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BLAST of jgi.p|Trimin1|353616 vs. uniprot
Match: A0A7S4JZX3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JZX3_9STRA)

HSP 1 Score: 115 bits (287), Expect = 2.140e-25
Identity = 68/232 (29.31%), Postives = 108/232 (46.55%), Query Frame = 2

Query:  977 KRKGKFSAEESARVEASIRDYCALHNVSVERLCQDGGHKGEIRGAWHIIAEALPERTVQARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSGCKGSADPPRGPWSDDEIQQLRQLVRVHGPKWRLIETHIGRISEACRDKYRELNPEEHRTGLWDRAEEERLHELLWDFFKVAPDTRLSDLPKTE------IPWDFISAQHGTRSRVMCLKKMENI 1654
            +  GKF+  E+A V  +I +YCA  N++  RLC +  HK E++GAW  IA  LP RTVQ+                                               G +      RGPWS++E++ L  +V  +G KW  I++ + R +++CRDK+RE++ + +  G W   E E L  L+ +  +  P+  + +L K        +PW  IS + G RSR+ C KK + +
Sbjct:   19 RNNGKFTPAETAVVRRAIEEYCAAKNITTSRLCSECDHKAELKGAWMEIARRLPHRTVQSVYRH-------------------------------------------GLRQLHPFKRGPWSEEEVKLLLDMVNRYGKKWSAIQSKLHRSADSCRDKHREMSSD-YVKGRWKEGETELLKRLIREHLRTNPNADIVELGKRVEAEDIVLPWSSISKRMGKRSRLSCFKKWQKM 206

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BLAST of jgi.p|Trimin1|353616 vs. uniprot
Match: A0A6H5K2Z7_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2Z7_9PHAE)

HSP 1 Score: 119 bits (297), Expect = 1.570e-24
Identity = 81/273 (29.67%), Postives = 126/273 (46.15%), Query Frame = 2

Query:  974 GKRKGKFSAEESARVEASIRDYCALHNVSVERLCQDGGHKGEIRGAWHIIAEALPERTVQARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSGCKGSADPPRGPWSDDEIQQLRQLVRVHGPKWRLIETHIGRISEACRDKYRELNPEEHRTGLWDRAEEERLHELLWDFFKVAPD---TRLSDLPKTEIPWDFISAQHGTRSRVMCLKKMENIMSAEFQREARARGES--RAHTDLRLVEELLETGAEDESEITWA 1777
            G + GK+S  ES  V  +I+ Y + + ++VE LCQDG      + AW  IA  LP+R+VQ+                                               G +       GPW+D+E+ QL+ LV  HG KW  I   +GR ++ACRDK REL P   + G W   EE+ L++L+ D  + + D     L+     ++PW  ++    +R+R+ C KK + +     Q+    R  S   A  +L  V+ +++TGA DESE+ W+
Sbjct:   93 GMKGGKYSNTESKIVVDAIKSYASANAITVESLCQDGSRSVGSKRAWLSIANCLPDRSVQSIYRH-------------------------------------------GIRQLHGMKMGPWTDEEVAQLKLLVSTHGNKWSEIGKKVGRSADACRDKSRELIPTP-QEGPWTEQEEKLLNKLIMDRMECSEDMSEVMLTGDEDVDVPWAEVARIIKSRNRIACRKKWDYLQMQRRQKRQYVRDTSGSAASVNLAFVKAIIDTGAADESELNWS 321

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BLAST of jgi.p|Trimin1|353616 vs. uniprot
Match: A0A1Y1IKR6_KLENI (Uncharacterized protein (Fragment) n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IKR6_KLENI)

HSP 1 Score: 85.5 bits (210), Expect = 9.510e-14
Identity = 68/277 (24.55%), Postives = 114/277 (41.16%), Query Frame = 2

Query:  986 GKFSAEESARVEASIRDYCALHNVS---VERLCQDGGHKGEIRGAWHIIAEALPERTVQARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSGCKGSADPPRGPWSDDEIQQLRQLVRVHGPKWRLIETHIGRISEACRDKYRELNPEEHRTGLWDRAEEERLHELLWDFF----------KVAPDTRLSDLPKTEIPWDFISAQHGTRSRVMCLKKMENIMSAEFQREARARGESRAHTDLRLVEELLETGAEDESEITWA 1777
            G FS EE   + A++ +Y    N+    +E+L     HK E++GAW  IA  LPER+V+                                                         +G WS +E ++L+ L    GPKW  I + +GR+ +AC+DK+R +   + + G W   E E+L  L+ +            +V    ++ D    +I W  ISA+ G R+   CL+   ++++    R      E     D  +++ ++E+GA  E E+ WA
Sbjct:  204 GAFSKEEDEIIRAAVAEYIEERNLGEDGIEKLLNTRKHK-EVQGAWLEIARCLPERSVKRVHARACRLLHGGNY------------------------------------------KGRWSREEEERLQTLHAQLGPKWVQIGSMMGRLPDACKDKWRIIGVTDKKKGQWSPKESEQLSRLVQESLSQKRIRTSVERVVDGRQVRD----DIDWTAISARMGVRTANQCLRHWYDVLAPGMVRTGTGVEEWGGEDDQLMLQRIVESGATSEPEVEWA 433

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BLAST of jgi.p|Trimin1|353616 vs. uniprot
Match: A0A3P3YA00_PLABS (Uncharacterized protein n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YA00_PLABS)

HSP 1 Score: 74.7 bits (182), Expect = 2.370e-10
Identity = 60/201 (29.85%), Postives = 84/201 (41.79%), Query Frame = 2

Query:  980 RKGKFSAEESARVEASIRDYCALHNVS---VERLCQDGGHKGEIRGAWHIIAEALPERTVQARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSGCKGSADPPRGPWSDDEIQQLRQLVRVHGPKWRLIETHIGRISEACRDKYRELNPEEHRTGLWDRAEEERLHELLWDFFKVAPDTRLSDLPK 1573
            +KG+F+  E   +  ++ DY   H++    ++ LC     + E+RGAW IIA+ LP R+V +                                                 +  AD   G W+DD+I  LRQLV  HG KW LI + I R+  +CRDKYR L   E R   W   EEE    LL    +   DT   +LP+
Sbjct:  123 QKGRFTPGEKEILRKAVLDYVREHDLGDAGIQMLCAKK-RRPELRGAWSIIAQCLPHRSVSSCYHFCT-------------------------------------------RAFADRSTGKWTDDDIALLRQLVAKHGRKWTLIGSMIERLPCSCRDKYRLL---EKRGSKWTLDEEE----LLVQHMRAYGDTVPLELPR 272

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BLAST of jgi.p|Trimin1|353616 vs. uniprot
Match: A0A7R9ADU9_9CRUS (Hypothetical protein n=1 Tax=Darwinula stevensoni TaxID=69355 RepID=A0A7R9ADU9_9CRUS)

HSP 1 Score: 72.8 bits (177), Expect = 1.990e-9
Identity = 47/150 (31.33%), Postives = 79/150 (52.67%), Query Frame = 2

Query: 1328 GPWSDDEIQQLRQLVRVHGPKWRLIETHIGRISEACRDKYRELNPEEHRTGLWDRAEEERLHELLWDFFKVAPDTRLSDLPKTEIPWDFISAQHGTRSRVMCLKKMENIMSAEFQREARARGESRAHTD-LRLVEELLETGAEDESEITW 1774
            GP+S +E++ L+QLV +HG  W+LI   +GR  E+ +D+YR L  ++ R G W+  EE++L     D           ++  + I W  ++   GTRS   C  K  + +   + +E++  G    H D L LVE++    A++E +I W
Sbjct:  304 GPYSQEEVEALKQLVSIHGKNWKLIGAALGRSGESIKDRYR-LVRDDCRNGKWNEEEEQKLS----DAVHQVCGQESGEMAVSGINWTEVAQIVGTRSEKQCRNKWLHCL---YWKESK--GSVWTHKDDLILVEKIGALNAKEEGDIDW 443

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BLAST of jgi.p|Trimin1|353616 vs. uniprot
Match: UPI0018849292 (cyclin-D-binding Myb-like transcription factor 1 isoform X1 n=2 Tax=Pollicipes pollicipes TaxID=41117 RepID=UPI0018849292)

HSP 1 Score: 71.2 bits (173), Expect = 4.870e-9
Identity = 46/156 (29.49%), Postives = 79/156 (50.64%), Query Frame = 2

Query: 1328 GPWSDDEIQQLRQLVRVHGPKWRLIETHIGRISEACRDKYRELNPEEHRTGLWDRAEEERLHELLWDFFKVAPDTRLSDLPKTEIPWDFISAQHGTRSRVMCLKKMENIMS------AEFQREARARGESRAHTDLRLVEELLETGAEDESEITWA 1777
            G ++DDE++QLR L  +HG KW+ I   +GR + + +D+ R L  +    G W + EEERL + ++D  +  P  +++    + I W  ++ +  TRS   C  K  N +S       E+ RE           D  L++ L ++G  +E +I W+
Sbjct:  296 GRYTDDEVEQLRNLRAIHGNKWQTIGALMGRSAASVKDRVRVLR-DNCNQGKWLKEEEERLEQAVYDLTQTLPGQQVT----SGINWAAVAQKVITRSEKQCRSKWLNNLSWKTTGGEEWTRE----------DDKHLIDVLSDSGLAEEGDIDWS 436

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BLAST of jgi.p|Trimin1|353616 vs. uniprot
Match: K0TH64_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TH64_THAOC)

HSP 1 Score: 68.9 bits (167), Expect = 1.490e-8
Identity = 45/160 (28.12%), Postives = 68/160 (42.50%), Query Frame = 2

Query:  992 FSAEESARVEASIRDYCALHNVSVERLCQDGG-----HKGEIRGAWHIIAEALPERTVQARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSGCKGSADPPRGPWSDDEIQQLRQLVRVHGPKWRLIETHIGRISEACRDKYREL 1456
            +S +E   ++ ++ DYC  ++V+V +LC  GG     H   IRGAW +IA+ LP RTV +                                                        RG WS+DEI+ L +LV +HG KW+ I+  +GR +  CR K+ +L
Sbjct:   35 YSEDEVRTLQLAVHDYCESNDVTVSQLC--GGADHTVHNKRIRGAWQVIAQCLPHRTVLSVYRKALRRFHTHT-------------------------------------------RGKWSEDEIRSLLRLVELHGHKWKSIQDKLGRSATDCRLKFFDL 149

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BLAST of jgi.p|Trimin1|353616 vs. uniprot
Match: UPI001C920106 (cyclin-D-binding Myb-like transcription factor 1 n=2 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=UPI001C920106)

HSP 1 Score: 66.6 bits (161), Expect = 1.310e-7
Identity = 42/149 (28.19%), Postives = 74/149 (49.66%), Query Frame = 2

Query: 1328 GPWSDDEIQQLRQLVRVHGPKWRLIETHIGRISEACRDKYRELNPEEHRTGLWDRAEEERLHELLWDFFKVAPDTRLSDLPKTEIPWDFISAQHGTRSRVMCLKKMENIMSAEFQREARARGESRAHTDLRLVEELLETGAEDESEITW 1774
            G +++DE++QLR L  +HG +W  I   +GR + + +D+ R L  +    G W + EEERL + ++D  +  P   ++    + I W  ++ Q  TR+   C  K  N ++ +         E     D RL++ L E    +ES++ W
Sbjct:  273 GRYTEDEVEQLRNLRAIHGNRWGTIGALMGRSAASVKDRVRVLR-DNCNQGKWLKEEEERLEQAVYDLTETLPGQPVT----SGINWAAVAQQVITRTEKQCRSKWLNNLNWKTM----GGDEWTRDDDYRLIDVLYELQLSEESDVDW 412

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BLAST of jgi.p|Trimin1|353616 vs. uniprot
Match: A0A836CJU2_9STRA (Nucleolar protein,Nop52-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJU2_9STRA)

HSP 1 Score: 1163 bits (3008), Expect = 0.000e+0
Identity = 735/735 (100.00%), Postives = 735/735 (100.00%), Query Frame = 1

Query:    1 MVRKGGKKRKASEAQQDASDGGSRPQKRQETEDELDVDPTVIDQNSNEVRFGRNLVHVDKRVRDNTVAALRLWLKRRSRXXXXXXSSSGVLSDLDLAKIWKGLWYCMWMCDKAEVQQELAVTLSKMTHLFVDDLNDGLRFQATFYIMMRRQWGRLDYYRVDKFYSLIRCFFREGLRYCLRSDPAADADDDDDEAPSIYFDMQLVQAFMGIIRDECLLHLPNGYRMHMVDIFLPELKEAVGPQLTTEVLMAMLEPWLALLAAGGIPGQGAETLAFHRRVHQRIFDDLLTYVTPKAGKAQEGEESXXXXXXAFGAVEPVAIQKALFDIASGETTRERLRSQLYKLVKXXXXXXXXSGPSALAIHAAAVAAGAFDNETSRKERRAAKAAXXXXXXXXXXXGEGSXXGDGEGVQGAPEETPERAGKGPKGKKHKGVPVAGWAAAGIESGEINEGGGNGNAAVRKPKKRKAPLQPSDASDVTEATTXXXXXKKAVAPSTPAADTPGASXXXXXXXXXXQTAASTEKGLSENGAAANAPSTAEFFGAETSPSVPADTIALKFASASGKKHKPKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPGEGGTPSPSTPAARGPLQGGKAGASSTGAARKKKVTFGGKEAKDYRKSIKDLQTKPATPAKQTAQPSKGLLKTPVKQGXXXXXQGFGTPTPGTGLGMRGSKTAPRPAGRKRAKDF 2205
            MVRKGGKKRKASEAQQDASDGGSRPQKRQETEDELDVDPTVIDQNSNEVRFGRNLVHVDKRVRDNTVAALRLWLKRRSRXXXXXXSSSGVLSDLDLAKIWKGLWYCMWMCDKAEVQQELAVTLSKMTHLFVDDLNDGLRFQATFYIMMRRQWGRLDYYRVDKFYSLIRCFFREGLRYCLRSDPAADADDDDDEAPSIYFDMQLVQAFMGIIRDECLLHLPNGYRMHMVDIFLPELKEAVGPQLTTEVLMAMLEPWLALLAAGGIPGQGAETLAFHRRVHQRIFDDLLTYVTPKAGKAQEGEESXXXXXXAFGAVEPVAIQKALFDIASGETTRERLRSQLYKLVKXXXXXXXXSGPSALAIHAAAVAAGAFDNETSRKERRAAKAAXXXXXXXXXXXGEGSXXGDGEGVQGAPEETPERAGKGPKGKKHKGVPVAGWAAAGIESGEINEGGGNGNAAVRKPKKRKAPLQPSDASDVTEATTXXXXXKKAVAPSTPAADTPGASXXXXXXXXXXQTAASTEKGLSENGAAANAPSTAEFFGAETSPSVPADTIALKFASASGKKHKPKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPGEGGTPSPSTPAARGPLQGGKAGASSTGAARKKKVTFGGKEAKDYRKSIKDLQTKPATPAKQTAQPSKGLLKTPVKQGXXXXXQGFGTPTPGTGLGMRGSKTAPRPAGRKRAKDF
Sbjct:    1 MVRKGGKKRKASEAQQDASDGGSRPQKRQETEDELDVDPTVIDQNSNEVRFGRNLVHVDKRVRDNTVAALRLWLKRRSRXXXXXXSSSGVLSDLDLAKIWKGLWYCMWMCDKAEVQQELAVTLSKMTHLFVDDLNDGLRFQATFYIMMRRQWGRLDYYRVDKFYSLIRCFFREGLRYCLRSDPAADADDDDDEAPSIYFDMQLVQAFMGIIRDECLLHLPNGYRMHMVDIFLPELKEAVGPQLTTEVLMAMLEPWLALLAAGGIPGQGAETLAFHRRVHQRIFDDLLTYVTPKAGKAQEGEESXXXXXXAFGAVEPVAIQKALFDIASGETTRERLRSQLYKLVKXXXXXXXXSGPSALAIHAAAVAAGAFDNETSRKERRAAKAAXXXXXXXXXXXGEGSXXGDGEGVQGAPEETPERAGKGPKGKKHKGVPVAGWAAAGIESGEINEGGGNGNAAVRKPKKRKAPLQPSDASDVTEATTXXXXXKKAVAPSTPAADTPGASXXXXXXXXXXQTAASTEKGLSENGAAANAPSTAEFFGAETSPSVPADTIALKFASASGKKHKPKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPGEGGTPSPSTPAARGPLQGGKAGASSTGAARKKKVTFGGKEAKDYRKSIKDLQTKPATPAKQTAQPSKGLLKTPVKQGXXXXXQGFGTPTPGTGLGMRGSKTAPRPAGRKRAKDF 735

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BLAST of jgi.p|Trimin1|353616 vs. uniprot
Match: D7FXP8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXP8_ECTSI)

HSP 1 Score: 196 bits (497), Expect = 4.440e-49
Identity = 120/318 (37.74%), Postives = 174/318 (54.72%), Query Frame = 1

Query:  136 SNEVRFGRNLVHVDKRVRDNTVAALRLWLKRRSRXXXXXXSSSGVLSDLDLAKIWKGLWYCMWMCDKAEVQQELAVTLSKMTHLFVDDLNDGLRFQATFYIMMRRQWGRLDYYRVDKFYSLIRCFFREGLRYCLRSDPAAD----------------ADDDDDEAPSI-YFDMQLVQAFMGIIRDECLL--HLPNGYRMHMVDIFLPELKEAVGPQLTTEVLMAMLEPWLALLAAGGIPGQGAETLAFHRRVHQRIFDDLL-TYVTPKAGKAQEGEESXXXXXXAFGAVEPVAIQKALFDIASGETTRERLRSQLYKL 1029
            +NEV+FG++L   DKRVRD TV ALR WL++RSR         G L+DLDL KIW+GLWYCM+MCDKA VQ+ELA  L+ +  LF DD  +G+RF  +F + M+R W R+D  R+DK+Y+L+R F RE L +C    PA +                A++ +  A +   +D+ L+ A   ++  E L     P G R+H+ D++  E   A G  + TE  +  L PWL + A      +        RR  + +F+ LL  +   K G  +E EE        F AVE   +Q  LF++A+   TR++ R +LY+L
Sbjct:   32 NNEVKFGKHLASSDKRVRDRTVGALREWLRQRSR--------GGSLTDLDLLKIWRGLWYCMFMCDKAPVQRELAENLAGLLRLFKDDRAEGVRFFKSFCVTMQRDWERIDNLRIDKYYTLVRVFVREALAFCCLPPPAVEGQPKQXXXXXXXXNSPAEEAETSAKAGGVWDLGLLGAMSDVMEVEVLTLRPAPIGLRLHLADVWAEEACNAGGADMPTEAFLVALAPWLRVAA------EPETNPVVFRRTFEGVFEGLLGLFPEDKDGMEEEEEEKK-----VFAAVELDRVQACLFEVAAAPQTRDKRRVKLYEL 330

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BLAST of jgi.p|Trimin1|353616 vs. uniprot
Match: A0A225WWZ0_9STRA (Ribosomal RNA processing protein 1 n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WWZ0_9STRA)

HSP 1 Score: 168 bits (426), Expect = 6.750e-41
Identity = 105/297 (35.35%), Postives = 154/297 (51.85%), Query Frame = 1

Query:  148 RFGRNLVHVDKRVRDNTVAALRLWLKRRSRXXXXXXSSSGVLSDLDLAKIWKGLWYCMWMCDKAEVQQELAVTLSKMTHLFVDDLNDGLRFQATFYIMMRRQWGRLDYYRVDKFYSLIRCFFREGLRYCLRSDPAADADDDDDEAPSIYFDMQLVQAFMGIIRDECLLHLPNGYRMHMVDIFLPELKEAVGPQLTTEVLMAMLEPWLALLAAGGIPGQGAETLAFHRRVHQRIFDDLLT-YVTPKAGKAQEGEESXXXXXXAFGAVEPVAIQKALFDIASGETTRERLRSQLYKLVK 1035
            RFG++L H +K+ RD  +  L ++L ++              +DL+  K+WK L+YCMWM DK  VQ+EL+  L+ + H  V      L F  +F+  M R+W  LD  R+DKFYSL+R F RE +      D                +D  LVQ F+ I+  E +  LPNG RMH+ D++L E+  A G  +TTE  + +LEP+  LL++     +  +T+   +RV + +FDD+LT Y      + +E E         F  VE   +Q  +F IAS + T ER RS LY L K
Sbjct:    7 RFGQHLAHTEKKYRDRALKKLTVYLTKKQEW-----------TDLEWDKLWKALFYCMWMSDKRPVQEELSTNLAGLVHR-VPTSTGALEFVHSFFRTMHREWHGLDGLRLDKFYSLVRKFVRETVALLRVQD----------------WDEDLVQEFVTILSAEVVSQLPNGLRMHLADVYLTEIYNAAGQDVTTEAFIILLEPFFTLLSS-----EYDKTV--FKRVRELVFDDMLTKYKFGPQSEQEEEETDAEEEDKVFEQVEVAQVQHRIFAIASADDTAERNRSALYTLYK 268

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BLAST of jgi.p|Trimin1|353616 vs. uniprot
Match: A0A2P4Y0J0_9STRA (Ribosomal RNA processing protein 1 n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y0J0_9STRA)

HSP 1 Score: 167 bits (422), Expect = 2.630e-40
Identity = 113/301 (37.54%), Postives = 163/301 (54.15%), Query Frame = 1

Query:  148 RFGRNLVHVDKRVRDNTVAALRLWLKRRSRXXXXXXSSSGVLSDLDLAKIWKGLWYCMWMCDKAEVQQELAVTLSKMTHLFVDDLNDGLRFQATFYIMMRRQWGRLDYYRVDKFYSLIRCFFREGLRYCLRSDPAADADDDDDEAPSIYFDMQLVQAFMGIIRDECLLHLPNGYRMHMVDIFLPELKEAVGPQLTTEVLMAMLEPWLALLAAGGIPGQGAETLAFHRRVHQRIFDDLLTYVTPKAGKAQEGEESXXXXXX-----AFGAVEPVAIQKALFDIASGETTRERLRSQLYKLVK 1035
            RFG++L H +K+ RD  +  L ++L ++              +DL+  K+WK L+YCMWM DK  VQ+EL+  L+ + H  + D    L F  +F+  M R+W  LD  R+DKFYSL+R F RE +      D                +D +LVQ F+ I+  E +  LPNG RMH+ D++L E+  A G  +TTE  + +LEP+  LL++     +  +T+   +RV + +FDD+LT    K G   E +E XXXXXX      F  VE V +Q  +F IAS + T ER RS LY L K
Sbjct:    7 RFGQHLAHTEKKYRDRALKKLTVYLTKKKEW-----------TDLEWDKLWKALFYCMWMSDKRPVQEELSSNLAGLVHR-IPDSTLALEFVHSFFRTMHREWHGLDGLRLDKFYSLVRKFVRETVALLRVQD----------------WDEELVQEFVTILSAEVVSQLPNGLRMHLADLYLTEIYNAAGKDVTTEAFITLLEPFFTLLSS-----EYDKTV--FKRVRELVFDDMLTKY--KFGSQPEKDEEXXXXXXXXXNKVFEQVEVVQVQHRIFAIASADDTAERNRSALYTLYK 270

[Close]

BLAST of jgi.p|Trimin1|353616 vs. uniprot
Match: H3GJI2_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GJI2_PHYRM)

HSP 1 Score: 162 bits (409), Expect = 1.410e-38
Identity = 110/304 (36.18%), Postives = 162/304 (53.29%), Query Frame = 1

Query:  148 RFGRNLVHVDKRVRDNTVAALRLWLKRRSRXXXXXXSSSGVLSDLDLAKIWKGLWYCMWMCDKAEVQQELAVTLSKMTHLFVDDLNDGLRFQATFYIMMRRQWGRLDYYRVDKFYSLIRCFFREGLRYCLRSDPAADADDDDDEAPSIYFDMQLVQAFMGIIRDECLLHLPNGYRMHMVDIFLPELKEAVGPQLTTEVLMAMLEPWLALLAAGGIPGQGAETLAFHRRVHQRIFDDLLTYVTPKAGKAQEGEESXXXXXX--------AFGAVEPVAIQKALFDIASGETTRERLRSQLYKLVK 1035
            RFG++L H +K+ RD  +  L ++L ++              +DL+  K+WK L+YCMWM DK  VQ+EL+  L+ + H  V +    L F  +F+  M R+W  LD  R+DKFYSL+R F RE +      D                +D ++VQ F+ I+  E +  LPNG RMH+ D++L E+  A G  +TTE  + +LEP+  LL+     G+  +T+   +RV + +F+D+LT    K G   E E+ XXXXXX         F  V+   +Q  +F IAS + T ER RS LY L K
Sbjct:    7 RFGQHLAHTEKKYRDRALKKLTVYLTKKKDW-----------TDLEWDKLWKALFYCMWMSDKRPVQEELSSNLAALVHK-VPEPEAALEFVHSFFRTMHREWHGLDGLRLDKFYSLVRKFVRESVALLRVQD----------------WDEEIVQEFVTILSSEVVSQLPNGLRMHLADLYLTEIYNAAGKDVTTEAFVTLLEPFFTLLS-----GEYDKTV--FKRVKELVFEDMLTKY--KFGPQPEKEDXXXXXXXXXXXXXDKVFELVDVAQVQHRIFAIASADDTAERNRSALYTLYK 273

[Close]

BLAST of jgi.p|Trimin1|353616 vs. uniprot
Match: W2Q468_PHYPN (Uncharacterized protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2Q468_PHYPN)

HSP 1 Score: 161 bits (407), Expect = 4.670e-38
Identity = 110/304 (36.18%), Postives = 164/304 (53.95%), Query Frame = 1

Query:  148 RFGRNLVHVDKRVRDNTVAALRLWLKRRSRXXXXXXSSSGVLSDLDLAKIWKGLWYCMWMCDKAEVQQELAVTLSKMTHLFVDDLNDGLRFQATFYIMMRRQWGRLDYYRVDKFYSLIRCFFREGLRYCLRSDPAADADDDDDEAPSIYFDMQLVQAFMGIIRDECLLHLPNGYRMHMVDIFLPELKEAVGPQLTTEVLMAMLEPWLALLAAGGIPGQGAETLAFHRRVHQRIFDDLLTYVTPKAGKAQEGEESXXXXXX--------AFGAVEPVAIQKALFDIASGETTRERLRSQLYKLVK 1035
            RFG++L H +K+ RD  +  L ++L ++              ++L+  K+WK L+YCMWM DK  VQ+EL+  L+ + H  + +    L F  +F+  M R+W  LD  R+DKFYSL+R F RE +   LR     D D ++D          LVQ F+ I+  E +  LPNG RMH+ D++L E+  A G ++TTE  M +LEP+  LL++     +  +T+   +RV + +FDD+L     K G   E E+S  XXXX         F  V+   +Q  +F IAS + T ER R+ LY L K
Sbjct:   63 RFGQHLAHTEKKYRDRALKKLTVYLTKKKEW-----------TELEWDKLWKALFYCMWMSDKRPVQEELSTNLAGLVHR-IPNAESALEFVHSFFRTMHREWHGLDGLRLDKFYSLVRKFIRETV-VLLR-----DQDWEED----------LVQEFVTILSTEVVSQLPNGLRMHLADLYLTEIHNAAGKEVTTEAFMTLLEPFFTLLSS-----EYDKTV--FKRVRELVFDDMLAKY--KFGPQSEKEKSDDXXXXXXXXXXDKVFEQVDVAQVQHRIFAIASADDTAERNRAALYTLYK 329

[Close]

BLAST of jgi.p|Trimin1|353616 vs. uniprot
Match: A0A1V9YSK9_9STRA (Ribosomal RNA processing protein 1 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YSK9_9STRA)

HSP 1 Score: 160 bits (406), Expect = 6.620e-38
Identity = 101/295 (34.24%), Postives = 151/295 (51.19%), Query Frame = 1

Query:  148 RFGRNLVHVDKRVRDNTVAALRLWLKRRSRXXXXXXSSSGVLSDLDLAKIWKGLWYCMWMCDKAEVQQELAVTLSKMTHLF-VDDLNDGLRFQATFYIMMRRQWGRLDYYRVDKFYSLIRCFFREGLRYCLRSDPAADADDDDDEAPSIYFDMQLVQAFMGIIRDECLLHLPNGYRMHMVDIFLPELKEAVGPQLTTEVLMAMLEPWLALLAAGGIPGQGAETLAFHRRVHQRIFDDLLTYVTPKAGKAQEGEESXXXXXXAFGAVEPVAIQKALFDIASGETTRERLRSQLYKL 1029
            +FG++L H DK VRD  V  L L+L ++              +DLDL KIWK L+YCMWM DK ++QQELA  L+K+ H F  ++L   LRF  +F+  + R+W  +D  R+DKFY LIR    +G ++   +D                   QL + F   +  E L  LPNG R+H  DI+L EL +A+G  + T++++ +LEP+  L+ +         T   +  V Q + +D     T +  ++ E E         F  V+   IQ  +FDIA+ E T ER R+ LY +
Sbjct:    8 KFGQHLAHTDKYVRDKAVKKLTLFLVKKKEW-----------TDLDLDKIWKALFYCMWMSDKPKIQQELAENLAKLIHSFPTEELK--LRFLHSFFKTIHREWHGIDGLRLDKFYVLIRMMLYQGFKFLEAND------------------WQLTEQFATHLYTEVLSKLPNGLRLHFADIYLTELYKALGQVVETQIMLQLLEPFFKLMTSDA---DKIVTKRVNDLVFQPLLNDYFFQETYEPNESTEPETDDENEPKVFTEVKLAPIQHRIFDIAAAEETLERNRNLLYSI 268

[Close]

BLAST of jgi.p|Trimin1|353616 vs. uniprot
Match: G4YJ53_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YJ53_PHYSP)

HSP 1 Score: 159 bits (402), Expect = 1.380e-37
Identity = 108/305 (35.41%), Postives = 162/305 (53.11%), Query Frame = 1

Query:  148 RFGRNLVHVDKRVRDNTVAALRLWLKRRSRXXXXXXSSSGVLSDLDLAKIWKGLWYCMWMCDKAEVQQELAVTLSKMTHLFVDDLNDGLRFQATFYIMMRRQWGRLDYYRVDKFYSLIRCFFREGLRYCLRSDPAADADDDDDEAPSIYFDMQLVQAFMGIIRDECLLHLPNGYRMHMVDIFLPELKEAVGPQLTTEVLMAMLEPWLALLAAGGIPGQGAETLAFHRRVHQRIFDDLLTYVT--PKAGKAQEGEESXXXXXX-------AFGAVEPVAIQKALFDIASGETTRERLRSQLYKLVK 1035
            RFG++L H +K+ RD  +  L ++L +++             +DL+  K+WK L+YCMWM DK  VQ+EL+  L+ + H  V      L F  +F+  M R+W  LD  R+DKFYSL+R F RE +      +                +D  L+Q F+ I+ +E +  LPNG RMH+ D++L E+  A G  +TTE  + ++EP+  LL+     G+  +T+   +RV + +F+D+LT     P+  K QE    XXXXXX        F  V+   +Q  +F IAS + T ER RS LY L K
Sbjct:    7 RFGQHLAHTEKKFRDRALKKLTVYLAKKTDW-----------NDLEWDKLWKALFYCMWMSDKRPVQEELSSNLAALVHK-VPTAEAALEFVHSFFRTMHREWHGLDGLRLDKFYSLVRKFVRETVALLRVQE----------------WDEDLLQTFVTILSEEVVSQLPNGLRMHLADLYLTEIYNAAGKDVTTEAFITLMEPFFTLLS-----GEYDKTV--FKRVRELVFEDMLTKFKFGPQPEKEQEDXXXXXXXXXXXXXXXKVFEQVDVAQVQHRIFAIASADDTAERNRSALYTLYK 276

[Close]

BLAST of jgi.p|Trimin1|353616 vs. uniprot
Match: A0A329RYE7_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RYE7_9STRA)

HSP 1 Score: 158 bits (400), Expect = 2.020e-37
Identity = 106/304 (34.87%), Postives = 159/304 (52.30%), Query Frame = 1

Query:  148 RFGRNLVHVDKRVRDNTVAALRLWLKRRSRXXXXXXSSSGVLSDLDLAKIWKGLWYCMWMCDKAEVQQELAVTLSKMTHLFVDDLNDGLRFQATFYIMMRRQWGRLDYYRVDKFYSLIRCFFREGLRYCLRSDPAADADDDDDEAPSIYFDMQLVQAFMGIIRDECLLHLPNGYRMHMVDIFLPELKEAVGPQLTTEVLMAMLEPWLALLAAGGIPGQGAETLAFHRRVHQRIFDDLLTYVTPKAGKAQEGEESXXXXXX--------AFGAVEPVAIQKALFDIASGETTRERLRSQLYKLVK 1035
            RFG++L H +K+ RD  +  L ++L ++              ++L+  K+WK L+YCMWM DK  VQ+EL+  L+ + H  +      L F  +F+  M R+W  LD  R+DKFYSL+R F RE +      D                ++  LVQ F+ I+  E +  LPNG RMH+ D++L E+  A G ++TTE  M +LEP+  LL++     +  +T+   +RV + +F+D+LT    K G   E E+  XXXXX         F   +   +Q  +F IAS + T ER RS LY L K
Sbjct:    7 RFGQHLAHTEKKYRDRALKKLTVYLTKKKEW-----------TELEWDKLWKALFYCMWMSDKRPVQEELSTNLAGLVHR-IPSAESALEFVHSFFRTMHREWHGLDGLRLDKFYSLVRKFVRETVALLRDQD----------------WEEDLVQEFVTILSTEVVSQLPNGLRMHLADLYLTEIYNAAGKEVTTEAFMILLEPFFTLLSS-----EYDKTV--FKRVRELVFEDMLTKY--KFGPQSEKEKDDXXXXXXXXXXXSKVFEQFDVAQVQHRIFAIASADDTAERNRSALYTLYK 273

[Close]

BLAST of jgi.p|Trimin1|353616 vs. uniprot
Match: D0NGX9_PHYIT (Ribosomal RNA processing protein 1 n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NGX9_PHYIT)

HSP 1 Score: 156 bits (394), Expect = 4.410e-37
Identity = 103/303 (33.99%), Postives = 156/303 (51.49%), Query Frame = 1

Query:  148 RFGRNLVHVDKRVRDNTVAALRLWLKRRSRXXXXXXSSSGVLSDLDLAKIWKGLWYCMWMCDKAEVQQELAVTLSKMTHLFVDDLNDGLRFQATFYIMMRRQWGRLDYYRVDKFYSLIRCFFREGLRYCLRSDPAADADDDDDEAPSIYFDMQLVQAFMGIIRDECLLHLPNGYRMHMVDIFLPELKEAVGPQLTTEVLMAMLEPWLALLAAGGIPGQGAETLAFHRRVHQRIFDDLLTYVTPKAGKAQEGEESXXXXXX-------AFGAVEPVAIQKALFDIASGETTRERLRSQLYKLVK 1035
            RFG++L H +K+ RD  +  L ++L +++             ++L+  K+WK L+YCMWM DK  VQ+EL+  L+ + H  +      L F  +F+  M R+W  LD  R+DKFYSL+R F RE +      D                ++ +LVQ F+ I+  E +  LPNG RMH+ D++L E+  A G  +TTE  M +LEP+  LL                +RV + +F+++LT     A   +E ++ XXXXXX        F  V+   +Q  +F IAS + T ER R+ LY L K
Sbjct:    7 RFGQHLAHTEKKYRDRALKKLTVYLTKKTEW-----------TELEWDKLWKALFYCMWMSDKRPVQEELSTNLAGLVHR-IPTAESALEFVHSFFRTMHREWHGLDGLRLDKFYSLVRKFVRETVVLLRDQD----------------WEEELVQEFVTILSTEVVSQLPNGLRMHLADLYLTEIHNAAGKDVTTEAFMTLLEPFFTLL-------NSEYDKTVFKRVRELVFEEMLTKYKFGAQPEKEKDQXXXXXXXXXXXXDKVFEQVDVAQVQHRIFAIASADDTAERNRAALYTLYK 274

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|353616 vs. uniprot
BLAST of jgi.p|Trimin1|353616 vs. uniprot

BLAST of jgi.p|Trimin1|353616 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 20


Match Name	E-value	Identity	Description
A0A836CJN0_9STRA	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A6T7HTI9_9STRA	2.930e-27	33.91	Hypothetical protein n=1 Tax=Attheya septentrional...	[more]
A0A7S4JZX3_9STRA	2.140e-25	29.31	Hypothetical protein (Fragment) n=1 Tax=Odontella ...	[more]
A0A6H5K2Z7_9PHAE	1.570e-24	29.67	MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta...	[more]
A0A1Y1IKR6_KLENI	9.510e-14	24.55	Uncharacterized protein (Fragment) n=1 Tax=Klebsor...	[more]
A0A3P3YA00_PLABS	2.370e-10	29.85	Uncharacterized protein n=2 Tax=Plasmodiophora bra...	[more]
A0A7R9ADU9_9CRUS	1.990e-9	31.33	Hypothetical protein n=1 Tax=Darwinula stevensoni ...	[more]
UPI0018849292	4.870e-9	29.49	cyclin-D-binding Myb-like transcription factor 1 i...	[more]
K0TH64_THAOC	1.490e-8	28.13	Uncharacterized protein n=1 Tax=Thalassiosira ocea...	[more]
UPI001C920106	1.310e-7	28.19	cyclin-D-binding Myb-like transcription factor 1 n...	[more]

Pages

BLAST of jgi.p|Trimin1|353616 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A836CJU2_9STRA	0.000e+0	100.00	Nucleolar protein,Nop52-domain-containing protein ...	[more]
D7FXP8_ECTSI	4.440e-49	37.74	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A225WWZ0_9STRA	6.750e-41	35.35	Ribosomal RNA processing protein 1 n=1 Tax=Phytoph...	[more]
A0A2P4Y0J0_9STRA	2.630e-40	37.54	Ribosomal RNA processing protein 1 n=1 Tax=Phytoph...	[more]
H3GJI2_PHYRM	1.410e-38	36.18	Uncharacterized protein n=1 Tax=Phytophthora ramor...	[more]
W2Q468_PHYPN	4.670e-38	36.18	Uncharacterized protein n=10 Tax=Phytophthora TaxI...	[more]
A0A1V9YSK9_9STRA	6.620e-38	34.24	Ribosomal RNA processing protein 1 n=1 Tax=Thraust...	[more]
G4YJ53_PHYSP	1.380e-37	35.41	Uncharacterized protein n=1 Tax=Phytophthora sojae...	[more]
A0A329RYE7_9STRA	2.020e-37	34.87	Uncharacterized protein n=2 Tax=Phytophthora TaxID...	[more]
D0NGX9_PHYIT	4.410e-37	33.99	Ribosomal RNA processing protein 1 n=1 Tax=Phytoph...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_173	contig	Contig_173:107891..115539 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|353616\|estExt_Genemark1.C_Ctg_1730014
BRITE	ko00000,ko00001,ko03021
KEGG Pathway	ko04918,map04918
KEGG ko	ko:K15225
Description	RNA polymerase II transcription regulator recruiting activity
COG category	ADK
Max annot lvl	2759\|Eukaryota
EggNOG OGs	COG5147@1\|root,KOG0051@2759\|Eukaryota
Evalue	9.36e-26
Seed ortholog	2850.Phatr48179
Hectar predicted targeting category	other localisation
Ec32 ortholog description	Homeodomain-like
Ec32 ortholog	Ec-08_006660.2
TranscriptId	353938
Track	FilteredModels1
ProteinId	353616

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|353616	gene_15876	Tribonema minus UTEX_B_3156	gene	Contig_173 107891..115539 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|353616	Trimin1\|353616\|estExt_Genemark1.C_Ctg_1730014	Tribonema minus UTEX_B_3156	polypeptide	Contig_173 107910..115539 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_15876_1	exon_15876_1	Tribonema minus UTEX_B_3156	exon	Contig_173 107891..108786 +
exon_15876_2	exon_15876_2	Tribonema minus UTEX_B_3156	exon	Contig_173 109720..109793 +
exon_15876_3	exon_15876_3	Tribonema minus UTEX_B_3156	exon	Contig_173 110940..111126 +
exon_15876_4	exon_15876_4	Tribonema minus UTEX_B_3156	exon	Contig_173 111212..111377 +
exon_15876_5	exon_15876_5	Tribonema minus UTEX_B_3156	exon	Contig_173 111912..111945 +
exon_15876_6	exon_15876_6	Tribonema minus UTEX_B_3156	exon	Contig_173 112818..112943 +
exon_15876_7	exon_15876_7	Tribonema minus UTEX_B_3156	exon	Contig_173 113238..113353 +
exon_15876_8	exon_15876_8	Tribonema minus UTEX_B_3156	exon	Contig_173 114529..114709 +
exon_15876_9	exon_15876_9	Tribonema minus UTEX_B_3156	exon	Contig_173 114799..114886 +
exon_15876_10	exon_15876_10	Tribonema minus UTEX_B_3156	exon	Contig_173 114985..115154 +
exon_15876_11	exon_15876_11	Tribonema minus UTEX_B_3156	exon	Contig_173 115273..115539 +

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR5_15876	UTR5_15876	Tribonema minus UTEX_B_3156	five_prime_UTR	Contig_173 107891..107909 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_15876	CDS_15876	Tribonema minus UTEX_B_3156	CDS	Contig_173 107910..108786 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_173:107891..115539+
coding sequence from alignment at Contig_173:107891..115539+

spliced messenger RNA

>mRNA_15876 ID=mRNA_15876|Name=jgi.p|Trimin1|353616|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2305bp|location=Sequence derived from alignment at Contig_173:107891..115539+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
TGCTGATCCACTTGAGGCCATGCTGGTTGGCGGTCCATTCGCTATAGGAG
CGCCGTCGGGCGCCCTAGCTCCGCATAAACCAGCTTCTCAACAGCAGCCG
CAGCAGCAGCAACGGCAGCAGCAGCTGCCGCAGCAGCAGTTGGCACATCC
GCTGCCGGATCAGCAGCCATCGGCCCGCAAGCACAAAAAGAAGAAGAAGA
AACGGCGGCAGCAGGAGCAGGAGCAGCAGGAGCAGTCGCCGCAGCAGTCG
CAAGAGCGGCATCATCAGCATCAGCGCCCCATACAGGATCAGCAACAACA
GCCACAGGCCCCCCTGCTCGGCCACCTGCTGCCTGCCGCTGCCGCTGCAG
TCGATCGCGGCGCCGTGCCTGACGAGCCCTGGCAGCGACGCCACCGCCAG
CCACATTCCCCGCAGCAGCGGCGGCAGCAGCAGCAGCGATCGCCAGCAGC
GCAGCAGCCGAAATCTCGGCAGGAGCGGCGGCAGCAGCAGCGGCAGCAGC
GCCGCCAGCTGCCAGCAACCAGCTCGAACGATGACAGCAGCGATGAAAGC
GCACAAGAGGATGAGCCCGCACCAGCGAACACGTCACGGTGTGAGGAGCG
GGACCCGCCAGCGCCGCGGCTTGCCAGTCTGCTGCCTGCCGCCGCGATTG
CCGATGCCATCGTACACAGGCAGCAGCAGCGACAGCAGCAGCAGCAGCAG
CAGCAGCAGCGATGGCAGCCAGTGCTGACGCCTCACCAGCGTCTGCAGCA
GCAGCAGCAGGTGGAGGAGTGGGGGCAGCAGCGGCAACGGCAGCGGCAGC
AGGCAGATTCGGATGAGCAGCCGGGAAGGAAGCGGTCCAGGACGGATGCT
GAGCCGGCGCACCGCAACGGAGGCAGCAGCGCTCGTCGCGATGGCGGCGC
CGCGGTGCGGCCAGCGCTCCCGCTCACCATGTCTGGCAACGCCAATGGCG
CAAGTGCTGCGCAACAGCAGGACGGCAAGAGGAAGGGCAAGTTCAGCGCG
GAGGAGTCGGCGCGCGTGGAGGCGTCGATCCGCGACTACTGCGCGCTGCA
CAACGTGTCCGTGGAGCGCCTGTGCCAGGACGGCGGGCACAAGGGGGAGA
TCCGGGGGGCGTGGCACATCATCGCGGAGGCGCTGCCGGAGCGCACCGTG
CAGGCACGGAGGCGTCGCAGGGGCGGCGGCCGCGGCGGCGGCGGCGGCGG
CAGCGGCGGCGGCAGCAGCGGCGGCGGCGGCGGCGGCGGCGGCGGCAGCG
GCGGCGGCGGCGGCAGCAGCGATGGCAGCAGTAGCGGTGGTGACAGCGGC
TGCAAGGGCAGCGCTGATCCTCCGAGGGGGCCATGGAGCGATGATGAAAT
CCAGCAGCTGCGGCAGCTAGTGCGGGTGCACGGCCCCAAGTGGCGCCTCA
TCGAGACGCACATCGGGCGCATCTCGGAGGCCTGCAGGGACAAGTACCGG
GAACTCAACCCCGAAGAGCACAGGACGGGACTGTGGGACCGCGCCGAAGA
GGAGCGTCTCCACGAGCTGTTGTGGGACTTCTTCAAGGTCGCCCCGGACA
CGCGCCTGTCGGATCTGCCCAAGACGGAGATCCCGTGGGACTTCATCAGC
GCTCAGCACGGCACGCGCAGCCGCGTCATGTGCCTCAAGAAGATGGAGAA
CATCATGAGCGCGGAGTTCCAGAGGGAGGCGCGCGCGCGCGGCGAGTCGC
GCGCGCACACGGACTTGAGGCTGGTGGAGGAGCTCCTCGAGACGGGCGCG
GAGGACGAGTCGGAGATCACCTGGGCAAAGTCGCGCGCGCACACGGACTC
GAGGTCGGTGGAGGAGCTCCTCGAGACGGGCGCGGAGGACGAGTCCAAGA
TCACCTGGGCAAAGGCGCTTGCTCTGAGCAGCAGCAGCGGTGGCGGCGCG
CCGGCGCTCCATCTAGCATGCCGAGCGATTGGCCGTAAGGCCGTCTCGAA
GCGGCGCGGCGATGCCCACAAGCATACAAAGGCACGCACGAGCACACAGT
TCATCATTACCGCACCCGACATGAATCTCGCGCTGTACCTGTCGCACCCC
ATCGCCAGCACGCGCTGGATACGGCTCAGGAGCCGCATCCCCGGCAGCGC
CGCCATGTCATTTGTGGCAGCGCTCCGCGAATGCCGCGCCGGCCTGCTCG
ACGCGGTGCATGCCATCGACAACGGCGAACGCCCGCGCGCGAAAGGTAAG
CGGCACAAGACGCCGCAGCAGCGCGTCGTGGGCTCGCTGCCGGGGGGCGT
TTCGGATGACGACGACGACTCCTCCGATGAGGACGACTATTACGGCGACG
AGTAG

protein sequence of jgi.p|Trimin1|353616

>Trimin1|353616|estExt_Genemark1.C_Ctg_1730014 ID=Trimin1|353616|estExt_Genemark1.C_Ctg_1730014|Name=jgi.p|Trimin1|353616|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=762bp
MLVGGPFAIGAPSGALAPHKPASQQQPQQQQRQQQLPQQQLAHPLPDQQP
SARKHKKKKKKRRQQEQEQQEQSPQQSQERHHQHQRPIQDQQQQPQAPLL
GHLLPAAAAAVDRGAVPDEPWQRRHRQPHSPQQRRQQQQRSPAAQQPKSR
QERRQQQRQQRRQLPATSSNDDSSDESAQEDEPAPANTSRCEERDPPAPR
LASLLPAAAIADAIVHRQQQRQQQQQQQQQRWQPVLTPHQRLQQQQQVEE
WGQQRQRQRQQADSDEQPGRKRSRTDAEPAHRNGGSSARRDGGAAVRPAL
PLTMSGNANGASAAQQQDGKRKGKFSAEESARVEASIRDYCALHNVSVER
LCQDGGHKGEIRGAWHIIAEALPERTVQARRRRRGGGRGGGGGGSGGGSS
GGGGGGGGGSGGGGGSSDGSSSGGDSGCKGSADPPRGPWSDDEIQQLRQL
VRVHGPKWRLIETHIGRISEACRDKYRELNPEEHRTGLWDRAEEERLHEL
LWDFFKVAPDTRLSDLPKTEIPWDFISAQHGTRSRVMCLKKMENIMSAEF
QREARARGESRAHTDLRLVEELLETGAEDESEITWAKSRAHTDSRSVEEL
LETGAEDESKITWAKALALSSSSGGGAPALHLACRAIGRKAVSKRRGDAH
KHTKARTSTQFIITAPDMNLALYLSHPIASTRWIRLRSRIPGSAAMSFVA
ALRECRAGLLDAVHAIDNGERPRAKGKRHKTPQQRVVGSLPGGVSDDDDD
SSDEDDYYGDE*

mRNA from alignment at Contig_173:107891..115539+

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_15876 ID=mRNA_15876|Name=jgi.p|Trimin1|353616|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=7649bp|location=Sequence derived from alignment at Contig_173:107891..115539+ (Tribonema minus UTEX_B_3156 )
TGCTGATCCACTTGAGGCCATGCTGGTTGGCGGTCCATTCGCTATAGGAG
CGCCGTCGGGCGCCCTAGCTCCGCATAAACCAGCTTCTCAACAGCAGCCG
CAGCAGCAGCAACGGCAGCAGCAGCTGCCGCAGCAGCAGTTGGCACATCC
GCTGCCGGATCAGCAGCCATCGGCCCGCAAGCACAAAAAGAAGAAGAAGA
AACGGCGGCAGCAGGAGCAGGAGCAGCAGGAGCAGTCGCCGCAGCAGTCG
CAAGAGCGGCATCATCAGCATCAGCGCCCCATACAGGATCAGCAACAACA
GCCACAGGCCCCCCTGCTCGGCCACCTGCTGCCTGCCGCTGCCGCTGCAG
TCGATCGCGGCGCCGTGCCTGACGAGCCCTGGCAGCGACGCCACCGCCAG
CCACATTCCCCGCAGCAGCGGCGGCAGCAGCAGCAGCGATCGCCAGCAGC
GCAGCAGCCGAAATCTCGGCAGGAGCGGCGGCAGCAGCAGCGGCAGCAGC
GCCGCCAGCTGCCAGCAACCAGCTCGAACGATGACAGCAGCGATGAAAGC
GCACAAGAGGATGAGCCCGCACCAGCGAACACGTCACGGTGTGAGGAGCG
GGACCCGCCAGCGCCGCGGCTTGCCAGTCTGCTGCCTGCCGCCGCGATTG
CCGATGCCATCGTACACAGGCAGCAGCAGCGACAGCAGCAGCAGCAGCAG
CAGCAGCAGCGATGGCAGCCAGTGCTGACGCCTCACCAGCGTCTGCAGCA
GCAGCAGCAGGTGGAGGAGTGGGGGCAGCAGCGGCAACGGCAGCGGCAGC
AGGCAGATTCGGATGAGCAGCCGGGAAGGAAGCGGTCCAGGACGGATGCT
GAGCCGGCGCACCGCAACGGAGGCAGCAGCGCTCGTCGCGATGGCGGTGA
GAATCCAGTGACGCGTTTGCTCATTCGCCAACAGCCCTCAGTCTGTCACA
ATCGTTTGCAATGATGCAGGCGCACAGCGTTTGTACGCTGCGTGCCTCGC
GTTTCACAAGCTCCAACTGGTATTTGGAGCTCTCAAACAGGTGGCAGCGG
GATGCGCTTGCTGTGCAGCGGAGTCCAGGTTGAGACGCCGCGTACGCACA
AACCAGATGCACGACCGCGCAGAGGCGCCGCATCCTCTCCGTTGTGATGT
CACAGATGCTCAGCTGCAGCGCAGCGAGGCTCTGCGGCGATGTGCTCTGC
GGCATCAGCACTCTAAGTATGTCATGCATGCAACTTGCTCAGTTGATGCA
TAGGAAGGTCGGCAGAGATGTACATCATGGGAAAGTGCAGGGATGCGCTG
AAGAACGCCGGGGCGTCTCATGGACGGGATTAAAGTTGAAGTTGGCCTCA
TTCGCCAAAAAAGGCTTAGGCTCATTGGGAAGCCTTGTGTGTGGTGCTTT
AAGGTTTCCGCCCCTCTTCTGCCTCATGTGTGTACCGCTGACGAGCAGGA
GAGTCACTGCACCCCTGCACTACTGTACATTAAATCACCATGCGCTGTGG
CAAACTTCAAGCACAGAGCGTCGCTGATTGACCTACAGTCACATTCACAG
TACTTCAGACGACGAGCATGTCCATGCATACGTAGTCATATCTGACAGGC
AACCCAAGACGCACAACCTGAAAGCAATGAGCGCCTTCTCGACCACCCCT
GCCCTGAGGTACCTGCGCACACGCCGAATGGGAGGCTCTCGAGCATTTTG
CTCAAGCATGTGGTGCAATCTGAGAATGCATATGCCAGGTATACTAAAGA
CAAGCGCAAAAGGCACTGCATTTGTTGGTGAAATCCTGAAGTAACTGCTG
ACAAGTGGGGGCCTTGCTTGCTGCTGCAGGCGCCGCGGTGCGGCCAGCGC
TCCCGCTCACCATGTCTGGCAACGCCAATGGCGCAAGTGCTGCGCAACAG
CAGGTAAGCTCAAAGCTTTGAAGACTTCGTTTCTCGCATGTAGGTTCCAG
TAGCACTGCGTGTGCTTGTTTGCACTGTGGAATGGGTAGAACAAAAGGGC
CCCCGCTCATCAGTCTGTTTGTTTTGAACTTTAGTTGACATACATGGAGC
TGCTCCATGGTGCCGCCACCTGCGGTGCCAGCGAACACAGCGCGCATGGC
CCGTGAGCACTGCTGTTGGAACGCACACATGTGCTCCTCAGCGCACTTGC
ATGTGCCGGCGCACTTGCATGTGTCAGGGCATACATGTGGCAGTGCTCAG
CAGCCCTGCGGTTTCGCATTGGCCGTCGCCGCGCATGCCAACAGCGGCTG
CTGCTGCTGCTGCTGCTGCTGCTGCTGCCGCGCGCTGCAGAGGGCCGCGA
ACTGCGCAGTACTCTCAGCTGCCTGCGCATCAGGTGCTCAGCGGCCCTAT
TTGTTTGCGCGTGCAACGCGCGTTGCTCGCCGTCATCAGCAACTGCTGCC
AGTCGTTGGCGGCGACCGTTGCGGTACACAGCAGCATCAGCAGCCTCCAT
AGTTGTGGCCATGTGTAGAATTCAGCATGACTCCGTTGTGTATCCTTCGT
GCGCCGCGCCATGCATGACTCCTGATCTGTAGAGTATGCTATGCCTCCAG
TGTGTAGTGGTTAAGCTACGCGTGGATCAGTACGTGGACGGAACCCCTGC
TGCGGGTACCTCAAATCGCGCTACGAGCGCTGCTTCAGTACATCAAACAG
GGGGCGGCAGTGGATGCAAGGAGGCTGCAGGTGGCGCAGCACGCACATAC
GCCCGCCATGGACACGCTCAGCGGCAGTGCTCGCCCAGTGTTGCCACATG
GTGAAGTCTGTGTGTGGAATTGAGGTGTGTGCGCAAGCGTTGCTGCACCC
TGGCACTCCACGTTATTCAAGCATTCAGCACTCAGCACTCAGCGCGTGCA
TAGAAGAGGGAGAGCTGTGCCCCCTGCCCTCCCCCTTTGCAACAAACCCT
GAGCGCTGCCGCCGCATCGCGTTGCGACCACGCTTTAAAGCATTCAGCAC
GCAGCGCGTGCGCAGTAGAGTGAGAACTTGCCCCCGTGCTCGTCCCCTGC
ATAGCTCTGAGCGCTGTCGCCGCGAATCGCGATCTCGCCGCCGCCGCAGG
ACGGCAAGAGGAAGGGCAAGTTCAGCGCGGAGGAGTCGGCGCGCGTGGAG
GCGTCGATCCGCGACTACTGCGCGCTGCACAACGTGTCCGTGGAGCGCCT
GTGCCAGGACGGCGGGCACAAGGGGGAGATCCGGGGGGCGTGGCACATCA
TCGCGGAGGCGCTGCCGGAGCGCACCGTGCAGGCACGTATGTATGCAACG
CGCTCCCACAAGAAGTGGATACGTACCCTGAGTTTCCATCAGTTTTAGTT
GTGGCCGTGAGCATGACAGAGGGAGGCGTCGCAGGGGCGGCGGCCGCGGC
GGCGGCGGCGGCGGCAGCGGCGGCGGCAGCAGCGGCGGCGGCGGCGGCGG
CGGCGGCGGCAGCGGCGGCGGCGGCGGCAGCAGCGATGGCAGCAGTAGCG
GTGGTGACAGCGGCTGCAAGGGCAGCGCTGATCCTCCGTAAAGCGAGCCG
CATGCAAGCTGATACTGGTTGCGCAGTGCCCCGCTGGGCAGATAAGGTTA
TTGCGCAGTGCTCATTCCGTTGCGTCACAGTACTCAGGCTGCCGTAAGTC
TAACGATTCTGGTCATCTGTTGATGTGGAGTGTGTGTGTGTGTGGGGGGG
GGGGGGGGGGGGGGGGGGGGGGCTTGACGTGGGTGTGAGCTGACGCTGAG
GCCAGGGACTATGCTGCAGCTGTTGACAGGCGAGCGATGGGGTGACGACA
GTTACGGCCGTAACGGTGTCTGAACCGAAACCGTCATGTCACCCACCAGG
CATCGCATAAGAGGCACTCCTGTGTGTTGTTGCAGTGCGTGACCCTCACT
GATAGGCGTTATTCCCCATGGCATATGGGCACTGCTCATGGCGGATCTGG
TTTAGGCTGCTCGGTGCATGTGAAGCGTGTCACTCACCTCCTGACCCCGC
CCCCCCCCCTCGCCCCCCTGCACCTTACAGTCTGTATACAGGCATGGGAT
CCGGCGCATGCACGTGTGCAGGAGGGGGCCATGGAGCGATGATGAAATCC
AGCAGGTGACGCACCGCCGCACAGTTCATGTCTTGAAGTAGCGGTGTATG
ACGTCGTGCACACTGCAAAGAGAGACGTAGCCCATACCAAATGTGACTTA
AGTGTGAACTGCGGTCAGAGCCAGGCGCGCTGTTGCAGGGCCTGTTATCA
CTTGAGCGTTTTCGACATGGTGCCGTCAAAGCGTGCCTGGCTTGTCAGAT
TAATAGGCGCTCTGCAGTCAACCCCCATTCCGGTGTTGACACCTCTCGGC
AGGGGAGTCTGGCGCTTTGCGCTCTGCATGAAGCGAGTGCTGGTAGGGGG
CACGCACTGTCAGCGGCTCCAACCACTTCCCCCCCCATACCAGCGCAAAC
GACAATACATCATTGGTATATTTCTACATGAGTTTTGTGCCACTCTGCCT
GCCGTTCCCTATCGTAGTAAAAATACCCTACCTCAACAGGTGCATCAACG
CTCAGCAGATGTCTCAACTTCACCGCATGCAGCACCGTGCGCTATCAGCG
GTGCTGCTGGTGTGCTTCCTCATGCTGCTTAGCCCGATGTCAATGTACCG
TCGACCAATGTACCATCGACTCGACGCTCGCTAGAGGTAAATAATTTCGT
CACGCGATTGCGGCGGCTGTGCCGCTGCACAGACCAGTGGGGTTCGTCAC
AATCATTGTTTTGATCGCCTCTTGAAGATAGAATGGCGGCACACCACATG
ACTGCGGGCCCCCCTACGCTCCCTTCACTCACTGTTTGTGTGCTCTGCGC
CTTTCCGTCCTGCATTTCGCTACAGCTGCGGCAGCTAGTGCAGGTGCACG
GCCCCATGACTGCAGCCCCCCCCCACGTCCGTTCACTCATTGTCTGCTGC
ACCCGTCCGCCCGCGTTGTCACCGCAGCTGCGGCAGCTAGTGCGGGTGCA
CGGCCCCAAGTGGCGCCTCATCGAGACGCACATCGGGCGCATCTCGGAGG
CCTGCAGGGACAAGTACCGGGAACTCAACCCCGAAGAGCACAGGACGGGA
CTGGTGAGTTCACGCTGCATCGCCATGGCCCGCTTCTTGTCTCTGGCAAC
TCGCGCTTCGTACACAGGCAAACATGCAAACGCTGCGTTGCAATGCTCGC
GCCACTTGCACGTCAGCGATCTGGCAGTCGTAGGTCGCATCAGTGCAGAT
TGTGCTTGCAGCATTCGCGTGCCGCACCAGCCCCCCCCCTCTCGCTGTCA
TTGTGTGCGATACTGCCAGCCGTTCTACGCACAAGCCTGAGCACTGAAAC
ACACACACGCCGTGCGTTCTCCCCCTCCTCCGCACCGCCGCGCGTAGTGG
GACCGCGCCGAAGAGGAGCGTCTCCACGAGCTGTTGTGGGACTTCTTCAA
GGTCGCCCCGGACACGCGCCTGTCGGATCTGCCCAAGACGGAGATCCCGT
GGGACTTCATCAGGTGACGCTCCCCGTCTACTCGGCAAAGCGCCAACAAG
ACCGTCAGTAACATGTCACGTGCAAATTTGCGCGGCGGGAGGTCCCCACA
TGCGGCTGAGTACAACTCGGGCTCGTGTTCGATTTGGTAGACCTCGCCCC
AGGACTAGCACCAGAATGTACCGTGGATGGCATGCGTGCGCTGAGACTGC
ATCTGGCGACGCACCACGTAGTTTCTGCTCTTTCACGGGACGTACCAACT
GCGAGCCAAGCACAGCAGCGGCGGTGTGTTAATATTATGATTCACTCCGT
TGTGGGCAGGTAGCATGCAAGGATGCGCCTGTCAATCTGTCCGCTGAAGA
CTCACATTTTTTGTGACGCCAAGCAAGGTTCAAGGGTAGGCCACATCAGG
TTTTCAGCACTCTCACATCTGAAAAGTACACGTTCTGCAAGGATTGGGGG
GGGGGGGCACCAAACGCAGGCAATGGCATTGAGTTCAGCTCATGCACAAT
CGATGGTGCTCTTTTGCTAAACTTGAGAACTAGCACCAAAATCACCCTAC
GTCGAAGAGCGAACACGTGTACAAGTCCATGTGCTAAACTTGAGAACTAG
CACCAAAATCACCCTACGTCGAAGAGCGAACACGTGTACAAGTCCATGAG
TGCAGCATTTGGGGAGTGCATTGAGGGTTACGCGCGCGGGGAGCTGGGGT
GCATTGTACAGCTAGTGTGGGCACTGTACACCCATGCTGCTGGGTTGTGG
CAACGCTCAGCTTCCGACGTGCATTCTGGCTGCGCTTATGCGCCATGCAG
AGAGCCTCTCTCAAGGCCTCTAATAGTACAACAGCATCGGCACAGCACAC
GTCCCGTCTCAGCGCGAGCGCACGCACTCACACTCTCTCAACCACGCGAC
CGTATCCGCACAGCCGTGTGACCGCAGCATGCGCGCTCATATGCCTGTTG
CAACGTAGAGAGCTGTTGCTCACTACCCTGTTGCACCACACCCGCAGAGC
TAGACACCAAGGTGACAAATGGAACCGAAGACCGACGCCCAAGTCGTGTG
CAGCTAGAAGTGAATTGATTGTCGCCTGTCTACTGGCAAGTGTAACTGCC
GTCACCGTCAAGCGTGCAAACGGCAATGAGCATCAACTGCCATATGCTCC
AACAATACCTACCCACCCCTCCCCGCGCGCGCGCGCAGCGCTCAGCACGG
CACGCGCAGCCGCGTCATGTGCCTCAAGAAGATGGAGAACATCATGAGCG
CGGAGTTCCAGAGGGAGGCGCGCGCGCGCGGCGAGTCGCGCGCGCACACG
GACTTGAGGCTGGTGGAGGAGCTCCTCGAGACGGGCGCGGAGGACGAGTC
GGAGATCACCTGGGCAAAGGTGCGTGTTCGTGACCCGTGGCGACCGTGCC
GCCGCCGTGTACATGTGATGTGCTTGTGTTGTTGTCGATTTGGCCTCAAC
GCGGCGAGTCGCGCGCGCACACGGACTCGAGGTCGGTGGAGGAGCTCCTC
GAGACGGGCGCGGAGGACGAGTCCAAGATCACCTGGGCAAAGGCGCGTGC
GCGCTGCATGTGACTACGGTGTCGCCGCGTACATGTGATGTGCTTGTGTG
TTGCCGCGGATTTGTCTATACCTGGCATGCGTCCGTGCCGGCAGTTGCTC
TGAGCAGCAGCAGCGGTGGCGGCGCGCCGGCGCTCCATCTAGCATGCCGA
GCGATTGGCCGTAAGGCCGTCTCGAAGCGGCGCGGCGATGCCCACAAGCA
TACAAAGGCACGCACGAGCACACAGTTCATCATTACCGCACCCGACATGA
ATCTCGCGCTGTACGTATACACACTCCAGAAGCGAGCGCGAAGCGCCACG
GGCCCCTGCACCTGCTACGTGCATGTATTGACCTCCCCGTGCCGCTGCCG
CTGCCGCTGCCGCCGCTGCTGCCGCCGCGCAGCTGTCGCACCCCATCGCC
AGCACGCGCTGGATACGGCTCAGGAGCCGCATCCCCGGCAGCGCCGCCAT
GTCATTTGTGGCAGCGCTCCGCGAATGCCGCGCCGGCCTGCTCGACGCGG
TGCATGCCATCGACAACGGCGAACGCCCGCGCGCGAAAGGTAAGCGGCAC
AAGACGCCGCAGCAGCGCGTCGTGGGCTCGCTGCCGGGGGGCGTTTCGGA
TGACGACGACGACTCCTCCGATGAGGACGACTATTACGGCGACGAGTAG

Coding sequence (CDS) from alignment at Contig_173:107891..115539+

>mRNA_15876 ID=mRNA_15876|Name=jgi.p|Trimin1|353616|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2286bp|location=Sequence derived from alignment at Contig_173:107891..115539+ (Tribonema minus UTEX_B_3156 )
ATGCTGGTTGGCGGTCCATTCGCTATAGGAGCGCCGTCGGGCGCCCTAGC
TCCGCATAAACCAGCTTCTCAACAGCAGCCGCAGCAGCAGCAACGGCAGC
AGCAGCTGCCGCAGCAGCAGTTGGCACATCCGCTGCCGGATCAGCAGCCA
TCGGCCCGCAAGCACAAAAAGAAGAAGAAGAAACGGCGGCAGCAGGAGCA
GGAGCAGCAGGAGCAGTCGCCGCAGCAGTCGCAAGAGCGGCATCATCAGC
ATCAGCGCCCCATACAGGATCAGCAACAACAGCCACAGGCCCCCCTGCTC
GGCCACCTGCTGCCTGCCGCTGCCGCTGCAGTCGATCGCGGCGCCGTGCC
TGACGAGCCCTGGCAGCGACGCCACCGCCAGCCACATTCCCCGCAGCAGC
GGCGGCAGCAGCAGCAGCGATCGCCAGCAGCGCAGCAGCCGAAATCTCGG
CAGGAGCGGCGGCAGCAGCAGCGGCAGCAGCGCCGCCAGCTGCCAGCAAC
CAGCTCGAACGATGACAGCAGCGATGAAAGCGCACAAGAGGATGAGCCCG
CACCAGCGAACACGTCACGGTGTGAGGAGCGGGACCCGCCAGCGCCGCGG
CTTGCCAGTCTGCTGCCTGCCGCCGCGATTGCCGATGCCATCGTACACAG
GCAGCAGCAGCGACAGCAGCAGCAGCAGCAGCAGCAGCAGCGATGGCAGC
CAGTGCTGACGCCTCACCAGCGTCTGCAGCAGCAGCAGCAGGTGGAGGAG
TGGGGGCAGCAGCGGCAACGGCAGCGGCAGCAGGCAGATTCGGATGAGCA
GCCGGGAAGGAAGCGGTCCAGGACGGATGCTGAGCCGGCGCACCGCAACG
GAGGCAGCAGCGCTCGTCGCGATGGCGGCGCCGCGGTGCGGCCAGCGCTC
CCGCTCACCATGTCTGGCAACGCCAATGGCGCAAGTGCTGCGCAACAGCA
GGACGGCAAGAGGAAGGGCAAGTTCAGCGCGGAGGAGTCGGCGCGCGTGG
AGGCGTCGATCCGCGACTACTGCGCGCTGCACAACGTGTCCGTGGAGCGC
CTGTGCCAGGACGGCGGGCACAAGGGGGAGATCCGGGGGGCGTGGCACAT
CATCGCGGAGGCGCTGCCGGAGCGCACCGTGCAGGCACGGAGGCGTCGCA
GGGGCGGCGGCCGCGGCGGCGGCGGCGGCGGCAGCGGCGGCGGCAGCAGC
GGCGGCGGCGGCGGCGGCGGCGGCGGCAGCGGCGGCGGCGGCGGCAGCAG
CGATGGCAGCAGTAGCGGTGGTGACAGCGGCTGCAAGGGCAGCGCTGATC
CTCCGAGGGGGCCATGGAGCGATGATGAAATCCAGCAGCTGCGGCAGCTA
GTGCGGGTGCACGGCCCCAAGTGGCGCCTCATCGAGACGCACATCGGGCG
CATCTCGGAGGCCTGCAGGGACAAGTACCGGGAACTCAACCCCGAAGAGC
ACAGGACGGGACTGTGGGACCGCGCCGAAGAGGAGCGTCTCCACGAGCTG
TTGTGGGACTTCTTCAAGGTCGCCCCGGACACGCGCCTGTCGGATCTGCC
CAAGACGGAGATCCCGTGGGACTTCATCAGCGCTCAGCACGGCACGCGCA
GCCGCGTCATGTGCCTCAAGAAGATGGAGAACATCATGAGCGCGGAGTTC
CAGAGGGAGGCGCGCGCGCGCGGCGAGTCGCGCGCGCACACGGACTTGAG
GCTGGTGGAGGAGCTCCTCGAGACGGGCGCGGAGGACGAGTCGGAGATCA
CCTGGGCAAAGTCGCGCGCGCACACGGACTCGAGGTCGGTGGAGGAGCTC
CTCGAGACGGGCGCGGAGGACGAGTCCAAGATCACCTGGGCAAAGGCGCT
TGCTCTGAGCAGCAGCAGCGGTGGCGGCGCGCCGGCGCTCCATCTAGCAT
GCCGAGCGATTGGCCGTAAGGCCGTCTCGAAGCGGCGCGGCGATGCCCAC
AAGCATACAAAGGCACGCACGAGCACACAGTTCATCATTACCGCACCCGA
CATGAATCTCGCGCTGTACCTGTCGCACCCCATCGCCAGCACGCGCTGGA
TACGGCTCAGGAGCCGCATCCCCGGCAGCGCCGCCATGTCATTTGTGGCA
GCGCTCCGCGAATGCCGCGCCGGCCTGCTCGACGCGGTGCATGCCATCGA
CAACGGCGAACGCCCGCGCGCGAAAGGTAAGCGGCACAAGACGCCGCAGC
AGCGCGTCGTGGGCTCGCTGCCGGGGGGCGTTTCGGATGACGACGACGAC
TCCTCCGATGAGGACGACTATTACGGCGACGAGTAG