Trimin1|353589|estExt_Genemark1.C_Ctg_1720010 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|353589
Unique NameTrimin1|353589|estExt_Genemark1.C_Ctg_1720010
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length141
Homology
BLAST of jgi.p|Trimin1|353589 vs. uniprot
Match: A0A836CJH5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJH5_9STRA)

HSP 1 Score: 287 bits (734), Expect = 3.210e-98
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0
Query:    1 MSAVDFESAEWTGVPHGVVEMFRDPEWAEFLIPRVTGAISLLDAAAMGGHVEVLRWLHQEQATPFTHLTMAGAAFHKRLTALQWLYQAGCPYDIDRICSLSLQARISPAALTPQLMEWLRSIGALEQASSRERQQRAPPA 140
            MSAVDFESAEWTGVPHGVVEMFRDPEWAEFLIPRVTGAISLLDAAAMGGHVEVLRWLHQEQATPFTHLTMAGAAFHKRLTALQWLYQAGCPYDIDRICSLSLQARISPAALTPQLMEWLRSIGALEQASSRERQQRAPPA
Sbjct:    1 MSAVDFESAEWTGVPHGVVEMFRDPEWAEFLIPRVTGAISLLDAAAMGGHVEVLRWLHQEQATPFTHLTMAGAAFHKRLTALQWLYQAGCPYDIDRICSLSLQARISPAALTPQLMEWLRSIGALEQASSRERQQRAPPA 140          
BLAST of jgi.p|Trimin1|353589 vs. uniprot
Match: A0A835YNS1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNS1_9STRA)

HSP 1 Score: 101 bits (252), Expect = 1.320e-22
Identity = 53/115 (46.09%), Postives = 68/115 (59.13%), Query Frame = 0
Query:   14 VPHGVVEMFRDPEWAE-----FLIPRVTGAISLLDAAAMGGHVEVLRWLHQEQATPFTHLTMAGAAFHKRLTALQWLYQAGCPYDIDRICSLSLQARISPAALTPQLMEWLRSIG 123
            +P   V     PEW       F   RV    +L+D AA+GG+VEVLRWL QE A PFT  TM  AA    L AL+WL+ AGCP+D++ +C+ S +A      +TP  MEWLRS+G
Sbjct:  227 IPDPSVVDTAGPEWRHAPGYSFEHNRVGYQFTLMDKAAVGGNVEVLRWLRQEHALPFTPFTMRFAAEKGHLAALKWLHAAGCPHDVEDLCARSFRALADTPGVTPSQMEWLRSLG 341          
BLAST of jgi.p|Trimin1|353589 vs. uniprot
Match: A0A835YUZ6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUZ6_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 1.620e-17
Identity = 50/98 (51.02%), Postives = 59/98 (60.20%), Query Frame = 0
Query:    1 MSAVDFESAEWTGVPHGVVEMFRDPEWAEFLIPRVTGAISLLDAAAMGGHVEVLRWLHQEQATPFTHLTMAGAAFHKRLTALQWLYQAGCPYDIDRIC 98
            +S VDF   EW   P      FR   W     P     +SL+D AA+GGHVEVL+WL QE A P T LTMA AA    L ALQWL++AGCPYDI ++C
Sbjct:  304 LSVVDFGCLEWRDAP----ATFR---WCLGSRPL----LSLMDEAAIGGHVEVLQWLRQEHALPLTPLTMACAAGSGCLPALQWLHRAGCPYDIIQLC 390          
BLAST of jgi.p|Trimin1|353589 vs. uniprot
Match: A0A836CDJ7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDJ7_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 9.290e-16
Identity = 45/117 (38.46%), Postives = 61/117 (52.14%), Query Frame = 0
Query:   14 VPHGVVEMFRDPEW-----AEFLIPRVT--GAISLLDAAAMGGHVEVLRWLHQEQATPFTHLTMAGAAFHKRLTALQWLYQAGCPYDIDRICSLSLQARISPAALTPQLMEWLRSIG 123
            +P  +V  F  PEW      +++    T  G  +L++ AA  GHVEVL+WLHQE A PF  +T                Y+AGCP+DI+ +C +SL   +   A  P  MEWLR IG
Sbjct:  175 IPDSLVIDFESPEWINAPACDYIQTNGTFSGRATLMEKAAASGHVEVLQWLHQEHALPFRSVTXXXXXXXXXXXXXXXXYEAGCPHDINELCDVSLDNPMMKRA--PPQMEWLRGIG 289          
BLAST of jgi.p|Trimin1|353589 vs. uniprot
Match: A0A835ZI44_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZI44_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 2.350e-15
Identity = 50/123 (40.65%), Postives = 64/123 (52.03%), Query Frame = 0
Query:    1 MSAVDFESAEWTGVPHGVVEMFRDPEWAEFLIPRVTGAISLLDAAAMGGHVEVLRWLHQEQATPFTHLTMAGAAFHKRLTALQWLYQAGCPYDIDRICSLSLQARISPAALTPQLMEWLRSIG 123
            +SAV+    EWT   H +         + F +       +L+D AA GG VE L+WL QE A PFT +                 YQAGC  D+DR+C  SL+A ISP+A TP  MEWLRS+G
Sbjct:  281 LSAVNMRGPEWTAGRHYL---------SSFSVDGGRYRPTLMDKAAAGGCVEALQWLRQEHALPFTPVXXXXXXXXXXXXXXXXXYQAGCQCDVDRVCQWSLRA-ISPSA-TPLQMEWLRSLG 392          
BLAST of jgi.p|Trimin1|353589 vs. uniprot
Match: A0A835YWG6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWG6_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 1.080e-12
Identity = 34/58 (58.62%), Postives = 42/58 (72.41%), Query Frame = 0
Query:   42 LDAAAMGGHVEVLRWLHQEQATPFTHLTMAGAAFHKRLTALQWLYQAGCPYDIDRICS 99
            +D AA GG + VL+WL +E A PFT  TM  AA    L ALQWL+QAGCPYDID++C+
Sbjct:    1 MDRAAGGGDLGVLQWLRREHALPFTPRTMQYAAEDGHLPALQWLHQAGCPYDIDKLCA 58          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353589 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A836CJH5_9STRA3.210e-98100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YNS1_9STRA1.320e-2246.09Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YUZ6_9STRA1.620e-1751.02Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CDJ7_9STRA9.290e-1638.46Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZI44_9STRA2.350e-1540.65Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YWG6_9STRA1.080e-1258.62Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_172contigContig_172:63000..65180 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353589mRNA_15794Tribonema minus UTEX_B_3156 mRNAContig_172 62686..65180 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|353589|estExt_Genemark1.C_Ctg_1720010 ID=Trimin1|353589|estExt_Genemark1.C_Ctg_1720010|Name=jgi.p|Trimin1|353589|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=141bp
MSAVDFESAEWTGVPHGVVEMFRDPEWAEFLIPRVTGAISLLDAAAMGGH
VEVLRWLHQEQATPFTHLTMAGAAFHKRLTALQWLYQAGCPYDIDRICSL
SLQARISPAALTPQLMEWLRSIGALEQASSRERQQRAPPA*
back to top