Trimin1|178460|e_gw1.170.19.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|178460
Unique NameTrimin1|178460|e_gw1.170.19.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length560
Homology
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BLAST of jgi.p|Trimin1|178460 vs. uniprot
Match: A0A836CJR5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJR5_9STRA)

HSP 1 Score: 668 bits (1723), Expect = 3.840e-235
Identity = 559/559 (100.00%), Postives = 559/559 (100.00%), Query Frame = 0 
Query:    1 METAVQHVVADLPLLQWAVSPSGGGDTMSKVTCAEAARGGQLDSLQWLREAGCGWDRRXXXXXXXXXXXXXXXXXXXXXAPICKNTAIKDAAGREHLRAVQWLHVRGSFYEFALHESVSAAAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHARRSPWDETTCAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAADGILPPLPKAGGRGIIWGHVPTLAVEGGNVAALKYVLENGCAWGYGKYGIESACLRAAEKGDIEMLDYLLAQGARCDDVQPLLDIAALSGDVGLLQWSHSVGADLDLQTLVRSAVSHGHFEVLAWMHTEGLLLRAHDGLRQHATLSXXXXXXXXXXXXXXXXXLLTDEDVCVTAXXXXXXXXXXXXXXXXXXXXXXXXXTLFTNGGAGYAYDNVPQRFKEVIYLAQTRGCTCPIHEHCPIPREDLEVSEPGVIWEYDSDTVHDPEFFPWYRRYVTEDAP 559
            METAVQHVVADLPLLQWAVSPSGGGDTMSKVTCAEAARGGQLDSLQWLREAGCGWDRRXXXXXXXXXXXXXXXXXXXXXAPICKNTAIKDAAGREHLRAVQWLHVRGSFYEFALHESVSAAAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHARRSPWDETTCAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAADGILPPLPKAGGRGIIWGHVPTLAVEGGNVAALKYVLENGCAWGYGKYGIESACLRAAEKGDIEMLDYLLAQGARCDDVQPLLDIAALSGDVGLLQWSHSVGADLDLQTLVRSAVSHGHFEVLAWMHTEGLLLRAHDGLRQHATLSXXXXXXXXXXXXXXXXXLLTDEDVCVTAXXXXXXXXXXXXXXXXXXXXXXXXXTLFTNGGAGYAYDNVPQRFKEVIYLAQTRGCTCPIHEHCPIPREDLEVSEPGVIWEYDSDTVHDPEFFPWYRRYVTEDAP
Sbjct:    1 METAVQHVVADLPLLQWAVSPSGGGDTMSKVTCAEAARGGQLDSLQWLREAGCGWDRRXXXXXXXXXXXXXXXXXXXXXAPICKNTAIKDAAGREHLRAVQWLHVRGSFYEFALHESVSAAAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHARRSPWDETTCAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAADGILPPLPKAGGRGIIWGHVPTLAVEGGNVAALKYVLENGCAWGYGKYGIESACLRAAEKGDIEMLDYLLAQGARCDDVQPLLDIAALSGDVGLLQWSHSVGADLDLQTLVRSAVSHGHFEVLAWMHTEGLLLRAHDGLRQHATLSXXXXXXXXXXXXXXXXXLLTDEDVCVTAXXXXXXXXXXXXXXXXXXXXXXXXXTLFTNGGAGYAYDNVPQRFKEVIYLAQTRGCTCPIHEHCPIPREDLEVSEPGVIWEYDSDTVHDPEFFPWYRRYVTEDAP 559
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BLAST of jgi.p|Trimin1|178460 vs. uniprot
Match: A0A836CII6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CII6_9STRA)

HSP 1 Score: 112 bits (280), Expect = 5.380e-23
Identity = 72/179 (40.22%), Postives = 92/179 (51.40%), Query Frame = 0 
Query:  290 AGGRGIIWG--------------HVPTLAVEGGNVAALKYVLENGCAWGYGKYGIESACLRAAEKGDIEMLDYLLAQGARCD----------------------------DVQPLLDIAALSGDVGLLQWSH-SVG-ADLDLQTLVRSAVSHGHFEVLAWMHTEGLLLRAHDGLRQHAT 424
            AG RG  WG              ++P +A +G ++  LKYV+ENGC W       +  C  AA +GD++MLD+ +A GA CD                            DV+PLL  AAL+G V LLQW   S+G +  D+  LVR+A   G  EVLAWMH  GLL+RAHD LRQ AT
Sbjct:  204 AGERGFPWGSHKAAACVELIHRDYMPVVAAKGDSIEVLKYVIENGCEWD------QRVCSEAAGRGDVQMLDWAVANGAPCDYAEVTKRAWRAGRTAQLEVTKWLHTRGEDVKPLLVDAALAGHVPLLQWGRRSLGFSTTDVPALVRAAAKGGSVEVLAWMHAAGLLMRAHDDLRQLAT 376
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BLAST of jgi.p|Trimin1|178460 vs. uniprot
Match: A0A835ZGN6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGN6_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 1.100e-8
Identity = 33/58 (56.90%), Postives = 36/58 (62.07%), Query Frame = 0 
Query:    1 METAVQHVVADLPLLQWAVSPSGGGDTMSKVTCAEAARGGQLDSLQWLREAGCGWDRR 58
            M TAV+HVV +  L QWAV   GGG   S   CA AAR GQL  LQWLR+  C WD R
Sbjct:   72 MMTAVEHVVDNFSLFQWAVDAGGGGCPKSADLCASAARSGQLPLLQWLRDGDCEWDNR 129
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|178460 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A836CJR5_9STRA3.840e-235100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CII6_9STRA5.380e-2340.22Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZGN6_9STRA1.100e-856.90Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 26..281
e-value: 1.6E-13
score: 51.9
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 302..482
e-value: 4.2E-14
score: 54.4
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 150..442
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 35..200
NoneNo IPR availablePANTHERPTHR46586:SF3ANKYRIN REPEAT-CONTAINING PROTEINcoord: 117..324
NoneNo IPR availablePANTHERPTHR46586:SF3ANKYRIN REPEAT-CONTAINING PROTEINcoord: 14..224
coord: 307..475
NoneNo IPR availablePANTHERPTHR46586ANKYRIN REPEAT-CONTAINING PROTEINcoord: 14..224
NoneNo IPR availablePANTHERPTHR46586ANKYRIN REPEAT-CONTAINING PROTEINcoord: 307..475
coord: 117..324

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_170contigContig_170:64230..66043 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|178460mRNA_15240Tribonema minus UTEX_B_3156 mRNAContig_170 64230..66043 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|178460|e_gw1.170.19.1 ID=Trimin1|178460|e_gw1.170.19.1|Name=jgi.p|Trimin1|178460|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=560bp
METAVQHVVADLPLLQWAVSPSGGGDTMSKVTCAEAARGGQLDSLQWLRE
AGCGWDRRTCTEAARTGHLTMLQWAADAGAPICKNTAIKDAAGREHLRAV
QWLHVRGSFYEFALHESVSAAAKAGHLHVLRWLRKVYPLKTQHCRELMLI
AAREGYLAIVHWLHARRSPWDETTCAAAAEGGHLHVLQFLRHNGCPWDER
TCSAAAAGGHWDVLLFARGGGCPWDERTGSAAAAGGHLDVLLLAREDGCP
WDQGTCHAPLYSGHLEVLLYAREQGCGWAADGILPPLPKAGGRGIIWGHV
PTLAVEGGNVAALKYVLENGCAWGYGKYGIESACLRAAEKGDIEMLDYLL
AQGARCDDVQPLLDIAALSGDVGLLQWSHSVGADLDLQTLVRSAVSHGHF
EVLAWMHTEGLLLRAHDGLRQHATLSAASQGQLRVLKWLKAYGLLTDEDV
CVTAARAAEIEVLEWALESGWAWDDRICLTLFTNGGAGYAYDNVPQRFKE
VIYLAQTRGCTCPIHEHCPIPREDLEVSEPGVIWEYDSDTVHDPEFFPWY
RRYVTEDAP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf