mRNA_3319 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|161580 vs. uniprot
Match: A0A835Z617_9STRA (Camp-dependent protein kinase regulatory subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z617_9STRA) HSP 1 Score: 630 bits (1625), Expect = 1.260e-226 Identity = 363/363 (100.00%), Postives = 363/363 (100.00%), Query Frame = 1 Query: 1 MGTSFSKSAASPTAAAAAEPAAADLEVTPSAPTSXXXXXXXXXXXXXXXXXXXXXXXXXXXSAEVDQSKAPVVKKVVEKTADVIDQIKASIASNFLLNSLPAEQLSEVIDAMEEKDYAAGACIIQEGHDGDNFYVVASGECEVFIEGKNDGAALRTIRTGGGFGELALMYNAPRSATIKAVGDVKCWALDRVTFRRTIMAAGQARRKKYEHFLNQLELLRHLTPGDIAQLADAVEPLSFEAGDTIIEQGDADRQNFKFYIIEEGESQAFIRKDGRDVLMSTLGEGEYFGEKALVEMTPRTATVKALSAVKCACLSIAAFERLMGSCMQLKEQASSGYHDVDEVSHWLKLLQSDRPLSITVSCA 1089 MGTSFSKSAASPTAAAAAEPAAADLEVTPSAPTSXXXXXXXXXXXXXXXXXXXXXXXXXXXSAEVDQSKAPVVKKVVEKTADVIDQIKASIASNFLLNSLPAEQLSEVIDAMEEKDYAAGACIIQEGHDGDNFYVVASGECEVFIEGKNDGAALRTIRTGGGFGELALMYNAPRSATIKAVGDVKCWALDRVTFRRTIMAAGQARRKKYEHFLNQLELLRHLTPGDIAQLADAVEPLSFEAGDTIIEQGDADRQNFKFYIIEEGESQAFIRKDGRDVLMSTLGEGEYFGEKALVEMTPRTATVKALSAVKCACLSIAAFERLMGSCMQLKEQASSGYHDVDEVSHWLKLLQSDRPLSITVSCA Sbjct: 1 MGTSFSKSAASPTAAAAAEPAAADLEVTPSAPTSXXXXXXXXXXXXXXXXXXXXXXXXXXXSAEVDQSKAPVVKKVVEKTADVIDQIKASIASNFLLNSLPAEQLSEVIDAMEEKDYAAGACIIQEGHDGDNFYVVASGECEVFIEGKNDGAALRTIRTGGGFGELALMYNAPRSATIKAVGDVKCWALDRVTFRRTIMAAGQARRKKYEHFLNQLELLRHLTPGDIAQLADAVEPLSFEAGDTIIEQGDADRQNFKFYIIEEGESQAFIRKDGRDVLMSTLGEGEYFGEKALVEMTPRTATVKALSAVKCACLSIAAFERLMGSCMQLKEQASSGYHDVDEVSHWLKLLQSDRPLSITVSCA 363
BLAST of jgi.p|Trimin1|161580 vs. uniprot
Match: A0A835Z5U7_9STRA (Camp-dependent protein kinase regulatory subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5U7_9STRA) HSP 1 Score: 434 bits (1115), Expect = 2.840e-149 Identity = 221/283 (78.09%), Postives = 251/283 (88.69%), Query Frame = 1 Query: 184 SAEVDQSKAPVVKKVVEKTADVIDQIKASIASNFLLNSLPAEQLSEVIDAMEEKDYAAGACIIQEGHDGDNFYVVASGECEVFIEGKNDGAALRTIRTGGGFGELALMYNAPRSATIKAVGDVKCWALDRVTFRRTIMAAGQARRKKYEHFLNQLELLRHLTPGDIAQLADAVEPLSFEAGDTIIEQGDADRQNFKFYIIEEGESQAFIRKDGRDVLMSTLGEGEYFGEKALVEMTPRTATVKALSAVKCACLSIAAFERLMGSCMQL-KEQASSGYHDVDEV 1029 SAEVD+SK PVVKKVV K D+I+QIK S+A+NFL N+L EQL EV+DAME+KDYAAG II EG DGDNFYV+ASGECEVFIEGKNDGAALR ++ G GFGELALMYNAPRSATIKA V+CWALDR TFRRTIMAAGQARRKKYE FL +L+LL+HLTP +IAQLADAVEPLSF A +T+IEQGD DRQ+FKFYI+EEG++QAFIRKDG DVLMSTLG G+YFGEKALV+MTPRTATVKA +A+KCACLSIAAFERLMG C +L KE+AS+GY+DVDEV Sbjct: 43 SAEVDKSKEPVVKKVVPKEQDIINQIKESVANNFLFNALQPEQLEEVVDAMEQKDYAAGDTIISEGADGDNFYVIASGECEVFIEGKNDGAALRVMKAGSGFGELALMYNAPRSATIKAKVAVRCWALDRATFRRTIMAAGQARRKKYEQFLVKLDLLKHLTPAEIAQLADAVEPLSFAAAETVIEQGDGDRQSFKFYIVEEGQAQAFIRKDGNDVLMSTLGVGDYFGEKALVQMTPRTATVKAQTALKCACLSIAAFERLMGPCAELLKERASTGYNDVDEV 325
BLAST of jgi.p|Trimin1|161580 vs. uniprot
Match: D8LHU5_ECTSI (cAMP-dependent protein kinase regulatory subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHU5_ECTSI) HSP 1 Score: 296 bits (758), Expect = 3.060e-95 Identity = 159/264 (60.23%), Postives = 199/264 (75.38%), Query Frame = 1 Query: 184 SAEVDQSKAPVVKKVVEKTADVIDQIKASIASNFLLNSLPAEQLSEVIDAMEEKDYAAGACIIQEGHDGDNFYVVASGECEVFIEGKNDGAALRTIRTGGGFGELALMYNAPRSATIKAVGDVKCWALDRVTFRRTIMAAGQARRKKYEHFLNQLELLR--HLTPGDIAQLADAVEPLSFEAGDTIIEQGDADRQNFKFYIIEEGESQAFIRKDGRDVLMSTLGEGEYFGEKALVEMTPRTATVKALSAVKCACLSIAAFERLM 969 SAEVD SKAP VKKVV KT + I+ +I+ FL +SL Q EV+D+MEE+ Y +G +I+EG GD FYV SGE EVFI GKN+ LRT+++G FGELALMYN+PR+AT+KAV WALDR TFR TI+ AGQ RR+KYE FL +E+L+ +L+ DIAQLADAVEP++F GDTII++GD DR FKFYI+E+GE++A++ +DG +VLMS L G++FGEKALVE TPRTATVKA +KCA LSIA FERLM Sbjct: 52 SAEVDASKAPRVKKVVPKTDAQLKDIEKAISRCFLFSSLCEAQRKEVVDSMEERRYQSGDAVIEEGGPGDFFYVTGSGELEVFIAGKNNDEPLRTLKSGDAFGELALMYNSPRTATVKAVTGCLVWALDRTTFRHTILEAGQQRRQKYEVFLANVEILKRANLSATDIAQLADAVEPIAFADGDTIIKEGDDDRSLFKFYIVEDGEARAYVHEDGEEVLMSHLHPGDHFGEKALVEKTPRTATVKAHGPLKCAALSIAGFERLM 315
BLAST of jgi.p|Trimin1|161580 vs. uniprot
Match: A0A067BNM2_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BNM2_SAPPC) HSP 1 Score: 220 bits (560), Expect = 5.750e-66 Identity = 120/276 (43.48%), Postives = 167/276 (60.51%), Query Frame = 1 Query: 220 KKVVEKTADVIDQIKASIASNFLLNSLPAEQLSEVIDAMEEKDYAAGACIIQEGHDGDNFYVVASGECEVFIEGKNDGAALRTIRTGGGFGELALMYNAPRSATIKAVGDVKCWALDRVTFRRTIMAAGQARRKKYEHFLNQLELLRHLTPGDIAQLADAVEPLSFEAGDTIIEQGDADRQNFKFYIIEEGESQ-AFIRKDGRDVLMSTLGEGEYFGEKALVEMTPRTATVKALSAVKCACLSIAAFERLMGSCMQLKEQASSGYHDVDEVSHWLK 1044 KK V K+ D I++IK S+ASNF+ NSL EQ +VI AMEEK G +I +G +GD FYV+ GE +VF + G FGELALMYN+PR+AT+ A D WALDR TFRR I+ A + R +KYE L +EL+ HLT +++ +ADA++P ++ AGD +I Q DAD F FY++ +GE + DG ++ ++G G YFGEKAL E + R +V A + V C + +A FERLMG + E+ + Y + EV L+ Sbjct: 24 KKFVPKSDDAIERIKRSVASNFMFNSLDVEQQRDVIGAMEEKVVRRGDIVINQGDEGDYFYVIDDGELDVFTRATGLATPVFHYVRGNTFGELALMYNSPRAATVVATTDAVLWALDRDTFRRIIVTASKMRSQKYEALLANMELMSHLTRHEVSIIADALQPATYRAGDVVIRQDDADYNTFHFYLLVDGECNFVYSDDDGTSSVVGSVGPGGYFGEKALTEKSKRAVSVVAATDVSCLSMDVATFERLMGPFQDIFERQITSYPNASEVHFELR 299
BLAST of jgi.p|Trimin1|161580 vs. uniprot
Match: T0RL94_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0RL94_SAPDV) HSP 1 Score: 208 bits (530), Expect = 6.390e-61 Identity = 119/281 (42.35%), Postives = 168/281 (59.79%), Query Frame = 1 Query: 220 KKVVEKTADVIDQIKASIASNFLLNSLPAEQLSEVIDAMEEKDYAAGACIIQEGHDGDNFYVVASGECEVFIEGKNDGAALRTIRTGGGFGELALMYNAPRSATIKAVGDVKCWALDRVTFRRTIMAAGQARRKKYEHFLNQLELLRHLTPGDIAQLADAVEPLSFEAGDTIIEQGDADRQNFKFYIIEEGESQ-AFIRKDGRDVLMSTLGEGEYFGEKALVEMTPRTATVKALSAVKCACLSIAAFERLMGSCMQLKEQASSGYHDVDEVSHWLKLLQSD 1059 KK V K+ D I++IK ++A NF+ NSL EQ +VI AMEEK G II+ G +GD FYVV GE +VF K+ + G FGELALMYN+PR+AT+ A D WALDR TFRR I+ A + R +KYE L +EL+ HLT +++ +ADA++P ++ A D II Q D D F FYI+ +GE + DG+ ++ ++G YFGEKAL E + R +V A + V C + +A FERLMG + + + Y + EV ++ ++D Sbjct: 70 KKFVPKSDDAIERIKRAVAGNFMFNSLDTEQQRDVIGAMEEKVVRLGDAIIKLGDEGDFFYVVDEGEFDVFTH-KSPQEPVFHYTKGNTFGELALMYNSPRAATVVATADAVLWALDRDTFRRIIVTASKLRSQKYESLLVGMELMSHLTNAEVSVIADALQPAAYRASDVIIRQDDEDYNAFHFYIVMDGECNFVYTDGDGKSSVVGSVGPCGYFGEKALTEKSKRAVSVVAATDVTCLSMDVATFERLMGPFQDIFSRQITSYANASEVHLEMQSARTD 349
BLAST of jgi.p|Trimin1|161580 vs. uniprot
Match: A0A485LE61_9STRA (Aste57867_19409 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LE61_9STRA) HSP 1 Score: 208 bits (530), Expect = 7.340e-61 Identity = 119/273 (43.59%), Postives = 172/273 (63.00%), Query Frame = 1 Query: 214 VVKKVVEKTADVIDQIKASIASNFLLNSLPAEQLSEVIDAMEEKDYAAGACIIQEGHDGDNFYVVASGECEVFIEGKNDGAALRTIRTGGGFGELALMYNAPRSATIKAVGDVKCWALDRVTFRRTIMAAGQARRKKYEHFLNQLELLRHLTPGDIAQLADAVEPLSFEAGDTIIEQGDADRQNFKFYIIEEGESQ-AFIRKDGRDVLMSTLGEGEYFGEKALVEMTPRTATVKALSAVKCACLSIAAFERLMGSCMQLKEQASSGYHDVDEV 1029 +VKKVV K+ + I++IK +++ NF+ SL AEQ +VI+AMEE+ G +I++G +GD FYV+ SGE +V+ E A + GG FGELALMYN+PR+AT+ AV WALDR TFRR I++A Q R + E L ++L+ +LT +++ +ADA++P F AGD II+QGDA F FYI+ EG + F +DG ++ + YFGEKAL E + R +V A S VKC + +A FERLMG ++ + +GY + +V Sbjct: 71 LVKKVVPKSPETIERIKVAVSVNFMFKSLDAEQEMDVINAMEERIVKPGDQVIKQGAEGDYFYVIESGEYDVYTE--RSAAPVFHYTNGGTFGELALMYNSPRAATVVAVTAGALWALDRDTFRRIIVSANQKRSELNEKLLANMDLMANLTHMEVSVIADALQPAHFRAGDVIIKQGDARYSLFHFYILVEGSCEFVFTDEDGDSSVVGRVDAVGYFGEKALTEKSKRAVSVVATSDVKCLSMDVATFERLMGPFQEVFHRKITGYANASDV 341
BLAST of jgi.p|Trimin1|161580 vs. uniprot
Match: A0A024UHR7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UHR7_9STRA) HSP 1 Score: 208 bits (529), Expect = 9.780e-61 Identity = 120/274 (43.80%), Postives = 176/274 (64.23%), Query Frame = 1 Query: 220 KKVVEKTADVIDQIKASIASNFLLNSLPAEQLSEVIDAMEEKDYAAGACIIQEGHDGDNFYVVASGECEVFIEGKNDGAALRTIRTGGGFGELALMYNAPRSATIKAVGDVKCWALDRVTFRRTIMAAGQARRKKYEHFLNQLELLRHLTPGDIAQLADAVEPLSFEAGDTIIEQGDADRQNFKFYIIEEGESQAFIRKDGRDVLMSTLGEGE---YFGEKALVEMTPRTATVKALS-AVKCACLSIAAFERLMGSCMQLKEQASSGYHDVDEV 1029 KK+V K+A I++IK ++A NF+LNSL +E+L +VI AMEE+ AG II++G +GD FYV+ +GE +V+ + G + G FGELALMYN+PR+AT+ AV WALDR TFRR ++ A ++R ++ E FL+ ++L+ +LTP +++ +ADA++P++F AGD IIEQGDA+ +F FYI+ +G + AF+ G + +G E YFGEKAL E + R +V A S V C + +A FERLMG + + Y D V Sbjct: 75 KKIVPKSAATIERIKCAVACNFMLNSLGSEELMDVIHAMEERKVQAGDTIIKQGDEGDYFYVIDNGEFDVY-KSSTPGVPVFHYSNEGTFGELALMYNSPRAATVVAVSSGALWALDRDTFRRIVVTANKSRSEQNEKFLSGMDLMANLTPSEVSTIADALQPVTFRAGDVIIEQGDANYASFHFYILIQG-TCAFVLTHGETGDRTPIGNVEAVGYFGEKALTEKSKRAVSVIATSDVVHCLSMDVATFERLMGPFHDVFHRKIHSYVDPTNV 346
BLAST of jgi.p|Trimin1|161580 vs. uniprot
Match: A0A0L0SSL3_ALLM3 (cAMP-dependent protein kinase regulatory subunit n=2 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0SSL3_ALLM3) HSP 1 Score: 206 bits (525), Expect = 1.700e-59 Identity = 115/269 (42.75%), Postives = 169/269 (62.83%), Query Frame = 1 Query: 208 APVVKKVVEKTADVIDQIKASIASNFLLNSLPAEQLSEVIDAMEEKDYAAGACIIQEGHDGDNFYVVASGECEVFIEGKNDGAALRTIRTGGGFGELALMYNAPRSATIKAVGDVKCWALDRVTFRRTIMAAGQARRKKYEHFLNQLELLRHLTPGDIAQLADAVEPLSFEAGDTIIEQGDADRQNFKFYIIEEGESQAF-IRKDGRDVLMSTLGEGEYFGEKALVEMTPRTATVKALSAVKCACLSIAAFERLMGSCMQLKEQASSGY 1011 AP K ++ KT + +I+ASIA+NFL +L +Q ++V+DAM EK AAG +I++G GD FY+V +G +V++ A + GG FGELALMYNAPR+AT+ A D WALDRVTFRR +M +R+ YE FL ++ LL L P + ++ADA+E ++FE G+T+I+QGD FY+IE G+++ + ++G + M L +G YFGE AL+ PR AT+KA +KCA L AF RL+G ++ ++ + Y Sbjct: 137 APAEKVLIPKTPEQRARIQASIATNFLFRNLDEDQYTDVVDAMAEKKVAAGEAVIRQGGVGDYFYIVETGTLDVYVARNGVEAKVFDYGPGGSFGELALMYNAPRAATVTATSDAVLWALDRVTFRRILMDHTSRKRRMYEAFLEEVPLLSSLEPYERHKIADALESVTFEDGETVIKQGDI---GDNFYLIEAGDAEVVKVDENGVEHQMRPLRKGNYFGELALLSDKPRVATIKAKGKLKCATLGKKAFTRLLGPLAEIMQRNTQNY 402
BLAST of jgi.p|Trimin1|161580 vs. uniprot
Match: A0A068S010_9FUNG (cAMP-dependent protein kinase regulatory subunit n=3 Tax=Lichtheimia TaxID=688353 RepID=A0A068S010_9FUNG) HSP 1 Score: 204 bits (520), Expect = 1.200e-58 Identity = 117/272 (43.01%), Postives = 168/272 (61.76%), Query Frame = 1 Query: 217 VKKVVEKTADVIDQIKASIASNFLLNSLPAEQLSEVIDAMEEKDYAAGACIIQEGHDGDNFYVVASGECEVFIEGKNDGAA---LRTIRTGGGFGELALMYNAPRSATIKAVGDVKCWALDRVTFRRTIMAAGQARRKKYEHFLNQLELLRHLTPGDIAQLADAVEPLSFEAGDTIIEQGDADRQNFKFYIIEEGESQAF-IRKDGRDVLMSTLGEGEYFGEKALVEMTPRTATVKALSAVKCACLSIAAFERLMGSCMQLKEQASSGYHDV 1020 VK+V+ KT + ++I+AS+ +NFL +L EQ +V++AM EK A +I++G GD FYVV SG + +I GA + + GG FGELALMYNAPR+ATI A D WALDRVTFR +M +R+ YE FL ++ LL+ L P + ++ADA++ + FEAG T++ +GD +FYIIE G++ + + DG ++ LG G YFGE AL+ TPR ATV A +KCA L AF RL+G +++ ++ S YH + Sbjct: 147 VKQVIPKTQEQCERIRASVGNNFLFKNLDEEQYQDVVNAMAEKRVALDETVIEQGGVGDFFYVVESGTFDCYIS--KAGAPPNKVTSYEAGGSFGELALMYNAPRAATIVATSDAVLWALDRVTFRTILMENTSRKRRMYESFLEEVPLLKSLEPYERHKIADALDTVYFEAGATVVVEGDV---GDRFYIIESGDASVYRLGPDGMQQEVNALGRGNYFGELALLNDTPRAATVVAQGRLKCATLGKKAFTRLLGPVLEILKRNSENYHAI 413
BLAST of jgi.p|Trimin1|161580 vs. uniprot
Match: A0A4P9XXD4_9FUNG (cAMP-dependent protein kinase regulatory subunit n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XXD4_9FUNG) HSP 1 Score: 201 bits (511), Expect = 1.530e-58 Identity = 112/267 (41.95%), Postives = 165/267 (61.80%), Query Frame = 1 Query: 226 VVEKTADVIDQIKASIASNFLLNSLPAEQLSEVIDAMEEKDYAAGACIIQEGHDGDNFYVVASGECEVFIEGKNDGAALRTIRTGGGFGELALMYNAPRSATIKAVGDVKCWALDRVTFRRTIMAAGQARRKKYEHFLNQLELLRHLTPGDIAQLADAVEPLSFEAGDTIIEQGDADRQNFKFYIIEEGESQAF-IRKDGRDVLMSTLGEGEYFGEKALVEMTPRTATVKALSAVKCACLSIAAFERLMGSCMQLKEQASSGYHDVD 1023 V+ K+ +I ++++SN L +L ++Q V+DAM E+ AA +IQ+G +GDNFYVV G EV + GK + + GG FGELALMYN PR+AT+ AV D W +DRVTFRR + +RK YE FL + +L L P ++ +L+DA+EP ++E GD I+EQGD FYIIE+GE + + +DG ++++ +L G+YFGE AL+ TPR ATV A + V+ A L+ AF RL+G + + ++ + Y D Sbjct: 27 VIPKSDQAKMRIASAVSSNMLFGNLDSDQRRMVVDAMFERRVAANETVIQQGDEGDNFYVVDDGLFEVLVNGKK----VVEVEAGGSFGELALMYNTPRAATVTAVVDSILWGVDRVTFRRCVTGHNFRKRKLYESFLKTVPILSKLHPSEVTKLSDALEPANYEEGDYIVEQGDLGNY---FYIIEQGEVEVTKVDEDGNELMLPSLSAGDYFGELALIHNTPRAATVMAKNDVRVAALAKDAFVRLLGPVVDIMKRRTISYSTFD 286 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|161580 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_3319 ID=mRNA_3319|Name=jgi.p|Trimin1|161580|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1092bp|location=Sequence derived from alignment at Contig_17:64227..66457+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGGGACCAGCTTCAGCAAGAGCGCAGCGTCGCCCACCGCAGCAGCTGCback to top protein sequence of jgi.p|Trimin1|161580 >Trimin1|161580|e_gw1.17.190.1 ID=Trimin1|161580|e_gw1.17.190.1|Name=jgi.p|Trimin1|161580|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=364bp MGTSFSKSAASPTAAAAAEPAAADLEVTPSAPTSAAAEADAAPVPAPLPAback to top mRNA from alignment at Contig_17:64227..66457+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_3319 ID=mRNA_3319|Name=jgi.p|Trimin1|161580|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2231bp|location=Sequence derived from alignment at Contig_17:64227..66457+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_17:64227..66457+ >mRNA_3319 ID=mRNA_3319|Name=jgi.p|Trimin1|161580|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1092bp|location=Sequence derived from alignment at Contig_17:64227..66457+ (Tribonema minus UTEX_B_3156 )back to top |