Trimin1|353543|estExt_Genemark1.C_Ctg_1690011 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|353543
Unique Name	Trimin1\|353543\|estExt_Genemark1.C_Ctg_1690011
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	1007

Homology

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BLAST of jgi.p|Trimin1|353543 vs. uniprot
Match: A0A835ZFL9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFL9_9STRA)

HSP 1 Score: 1115 bits (2883), Expect = 0.000e+0
Identity = 1006/1006 (100.00%), Postives = 1006/1006 (100.00%), Query Frame = 0

Query:    1 MQVGFLDADRGAKELPPSLKLRRWIYPSRGFADPTQRIPAVTCLRISGGAMGYLAVGMSDGSVAVIRAGLSSLSAFARAEAEGGASVWYRYVGHAPHAVTALRWSRDERRLFSACAGGTVVSAFLPSPNHTRQSSTLVAGLALXXXXXXXXXXXARAMVVAKEGAPVVQLDWGEGVATAVRDVLLVVSPRRALLLYFSTRPPPDQPAPPGAGDVVASAAVDLDLRPVDIDGAGKAPLTHGGCLWGPLPEAGGDGAGDETGVSPPVVPTKAFVSQPGGRLWCMSLADGEVQSTHRPRFQASTNPFDAAIAAPEVNMGLLLPFIEGGPLLSWVPHDEDAAXXXXXXXXXXXXXXXXXXSAQPAVGEHAPPATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAASXADTVAVAVPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSSSGGXXXXRGETAXXXXXXXXXXXXXXXXXXXXXVVLVNPFANAVVCACGGELTGGVTALAAVGAVDDDPVYPPFFCAYALHGRGMVSRLLVTLRDLGLEPPSTPPMGDLRGASPGSAQQREAVTPVRRGASPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVTALRRASDHALRGAEAVLDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGQGELSPGHRQRSSSLLLEVEQLVLATHEALGGQGDGQAAAQVANEGADDDLEARMRASDAATQHDTTNSRTAXXXXXXXXXXXXXXXXXXXXXRAIREVSDQYTSALASVSSVAAVPRATGQQGAAAAATGPLDRAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGGTAFGLLASWAKSMGQVPATSGLKELCDEAWASAAGFYAP 1006
            MQVGFLDADRGAKELPPSLKLRRWIYPSRGFADPTQRIPAVTCLRISGGAMGYLAVGMSDGSVAVIRAGLSSLSAFARAEAEGGASVWYRYVGHAPHAVTALRWSRDERRLFSACAGGTVVSAFLPSPNHTRQSSTLVAGLALXXXXXXXXXXXARAMVVAKEGAPVVQLDWGEGVATAVRDVLLVVSPRRALLLYFSTRPPPDQPAPPGAGDVVASAAVDLDLRPVDIDGAGKAPLTHGGCLWGPLPEAGGDGAGDETGVSPPVVPTKAFVSQPGGRLWCMSLADGEVQSTHRPRFQASTNPFDAAIAAPEVNMGLLLPFIEGGPLLSWVPHDEDAAXXXXXXXXXXXXXXXXXXSAQPAVGEHAPPATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAASXADTVAVAVPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSSSGGXXXXRGETAXXXXXXXXXXXXXXXXXXXXXVVLVNPFANAVVCACGGELTGGVTALAAVGAVDDDPVYPPFFCAYALHGRGMVSRLLVTLRDLGLEPPSTPPMGDLRGASPGSAQQREAVTPVRRGASPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVTALRRASDHALRGAEAVLDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGQGELSPGHRQRSSSLLLEVEQLVLATHEALGGQGDGQAAAQVANEGADDDLEARMRASDAATQHDTTNSRTAXXXXXXXXXXXXXXXXXXXXXRAIREVSDQYTSALASVSSVAAVPRATGQQGAAAAATGPLDRAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGGTAFGLLASWAKSMGQVPATSGLKELCDEAWASAAGFYAP
Sbjct:    1 MQVGFLDADRGAKELPPSLKLRRWIYPSRGFADPTQRIPAVTCLRISGGAMGYLAVGMSDGSVAVIRAGLSSLSAFARAEAEGGASVWYRYVGHAPHAVTALRWSRDERRLFSACAGGTVVSAFLPSPNHTRQSSTLVAGLALXXXXXXXXXXXARAMVVAKEGAPVVQLDWGEGVATAVRDVLLVVSPRRALLLYFSTRPPPDQPAPPGAGDVVASAAVDLDLRPVDIDGAGKAPLTHGGCLWGPLPEAGGDGAGDETGVSPPVVPTKAFVSQPGGRLWCMSLADGEVQSTHRPRFQASTNPFDAAIAAPEVNMGLLLPFIEGGPLLSWVPHDEDAAXXXXXXXXXXXXXXXXXXSAQPAVGEHAPPATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAASXADTVAVAVPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSSSGGXXXXRGETAXXXXXXXXXXXXXXXXXXXXXVVLVNPFANAVVCACGGELTGGVTALAAVGAVDDDPVYPPFFCAYALHGRGMVSRLLVTLRDLGLEPPSTPPMGDLRGASPGSAQQREAVTPVRRGASPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVTALRRASDHALRGAEAVLDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGQGELSPGHRQRSSSLLLEVEQLVLATHEALGGQGDGQAAAQVANEGADDDLEARMRASDAATQHDTTNSRTAXXXXXXXXXXXXXXXXXXXXXRAIREVSDQYTSALASVSSVAAVPRATGQQGAAAAATGPLDRAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGGTAFGLLASWAKSMGQVPATSGLKELCDEAWASAAGFYAP 1006

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|353543 vs. uniprot

BLAST of jgi.p|Trimin1|353543 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A835ZFL9_9STRA	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 738..758
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 931..960
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 441..490
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 365..385
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 742..772
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 605..621
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 442..490
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 575..640
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 794..852
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 22..123 e-value: 3.7E-5 score: 25.1
IPR011041	Soluble quinoprotein glucose/sorbosone dehydrogenase	SUPERFAMILY	50952	Soluble quinoprotein glucose dehydrogenase	coord: 39..290

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_169	contig	Contig_169:114682..122872 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|353543	mRNA_17006	Tribonema minus UTEX_B_3156	mRNA	Contig_169 114682..122872 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|353543|estExt_Genemark1.C_Ctg_1690011 ID=Trimin1|353543|estExt_Genemark1.C_Ctg_1690011|Name=jgi.p|Trimin1|353543|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1007bp
MQVGFLDADRGAKELPPSLKLRRWIYPSRGFADPTQRIPAVTCLRISGGA
MGYLAVGMSDGSVAVIRAGLSSLSAFARAEAEGGASVWYRYVGHAPHAVT
ALRWSRDERRLFSACAGGTVVSAFLPSPNHTRQSSTLVAGLALALGKGAG
QGSGARAMVVAKEGAPVVQLDWGEGVATAVRDVLLVVSPRRALLLYFSTR
PPPDQPAPPGAGDVVASAAVDLDLRPVDIDGAGKAPLTHGGCLWGPLPEA
GGDGAGDETGVSPPVVPTKAFVSQPGGRLWCMSLADGEVQSTHRPRFQAS
TNPFDAAIAAPEVNMGLLLPFIEGGPLLSWVPHDEDAAAAVAAAAAAAAA
AAAATASAQPAVGEHAPPATAAAGEGTSSSSAAAVDAADGDSAAAADTSA
PATGASASTASSSDASADAGAGGSPAAADAASGADTVAVAVPGANASTSE
TPESGSTTADTGTSSAGTAGTGLSSSGGGGGSRGETATAAGASQRATTAA
AAAATAAAVVLVNPFANAVVCACGGELTGGVTALAAVGAVDDDPVYPPFF
CAYALHGRGMVSRLLVTLRDLGLEPPSTPPMGDLRGASPGSAQQREAVTP
VRRGASPPQQRSPQASGGGGGSGNPFVTPPQLRGAGGGSASAASAGEASA
EAAAAATAAAGSSGGGAAAAEEEAAAAAAHAAEVTALRRASDHALRGAEA
VLDEAAALTASSDEAATGNPPSARRRLRASAAAAAAEGAAAAAAAAEAEE
EAAAEEEEGQGELSPGHRQRSSSLLLEVEQLVLATHEALGGQGDGQAAAQ
VANEGADDDLEARMRASDAATQHDTTNSRTAAGDGADDDLETRMRASDAA
TQRAIREVSDQYTSALASVSSVAAVPRATGQQGAAAAATGPLDRAPAAAA
AAAGAPLTPPSAAAAVAAAAAAADGDGGSGEAAALGNSGRHRRQSSAPVG
GAAGGAGSPGGGGGMGGTAFGLLASWAKSMGQVPATSGLKELCDEAWASA
AGFYAP*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR015943	WD40/YVTN_repeat-like_dom_sf
IPR011041	Quinoprot_gluc/sorb_DH