Trimin1|96852|CE96851_79 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|96852
Unique Name	Trimin1\|96852\|CE96851_79
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	285

Homology

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BLAST of jgi.p|Trimin1|96852 vs. uniprot
Match: A0A836C767_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C767_9STRA)

HSP 1 Score: 531 bits (1367), Expect = 5.920e-190
Identity = 284/284 (100.00%), Postives = 284/284 (100.00%), Query Frame = 0

Query:    1 MTHAHRIPVGVRGMLLVACVYLVDAFQSRILSGSSSFLLRPPTTYAAPQCLKAGCSSRNAVFHHRARTRLRMASMSGDEDADVDELAERSSPPSSESGADAGASAEAAGGSNAPVDWDGAWAAKQKEMGNGDSGSDDSARAVEPXXXXXVSRPAFAGRKEIIVTGNKEEGYTYTEIDASGRVSRAGEADGGFRLDEDSPQLKDARRRIIEKEEQLVEAVAFDQVFVVGGALIAVLLAFMINVGMTGGISDGASRFRDVELPVNGVPPAVPHPSNQVYPDDDLVV 284
            MTHAHRIPVGVRGMLLVACVYLVDAFQSRILSGSSSFLLRPPTTYAAPQCLKAGCSSRNAVFHHRARTRLRMASMSGDEDADVDELAERSSPPSSESGADAGASAEAAGGSNAPVDWDGAWAAKQKEMGNGDSGSDDSARAVEPXXXXXVSRPAFAGRKEIIVTGNKEEGYTYTEIDASGRVSRAGEADGGFRLDEDSPQLKDARRRIIEKEEQLVEAVAFDQVFVVGGALIAVLLAFMINVGMTGGISDGASRFRDVELPVNGVPPAVPHPSNQVYPDDDLVV
Sbjct:    1 MTHAHRIPVGVRGMLLVACVYLVDAFQSRILSGSSSFLLRPPTTYAAPQCLKAGCSSRNAVFHHRARTRLRMASMSGDEDADVDELAERSSPPSSESGADAGASAEAAGGSNAPVDWDGAWAAKQKEMGNGDSGSDDSARAVEPXXXXXVSRPAFAGRKEIIVTGNKEEGYTYTEIDASGRVSRAGEADGGFRLDEDSPQLKDARRRIIEKEEQLVEAVAFDQVFVVGGALIAVLLAFMINVGMTGGISDGASRFRDVELPVNGVPPAVPHPSNQVYPDDDLVV 284

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BLAST of jgi.p|Trimin1|96852 vs. uniprot
Match: D8LAU9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LAU9_ECTSI)

HSP 1 Score: 75.5 bits (184), Expect = 4.010e-12
Identity = 62/183 (33.88%), Postives = 92/183 (50.27%), Query Frame = 0

Query:  103 ASAEAAGGSNAPVDWDGAWAAKQKEMGNGDSGSDDSARAVEPXXXXXVSRPAFAGRKEIIVTGNKEEGYTYTEIDASGRVSRAGEAD-GGFRLDEDSPQLKDARRRIIEKEEQLVEAVAFDQVFVVGGALIAVLLAFMINVGMTGGISDGASRFRDVELPVNGVPPAVPHPSNQVYPDDDLVV 284
            A+A   G     VDWD AWA+ ++ M       +   RA           PAF+GRK+++ T N++ GY + EI A G     G+   GGF    DS Q++D    I  KE++ V     +Q F    A++   L F + V M+GGI++G++RF+D+  P      A+P P+     D DLVV
Sbjct:  134 AAAAGEGAEEEQVDWDKAWASTRQRM-------EREKRAA----------PAFSGRKQVVATKNEDGGYDFEEISADGSSRMRGDKGRGGFGF-ADSNQVEDGPGGIRRKEQEAVNFATTNQAFAGLFAILLASLIFEVYVYMSGGITNGSTRFQDMGQPTTY--DALPLPATPPT-DSDLVV 295

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|96852 vs. uniprot

BLAST of jgi.p|Trimin1|96852 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A836C767_9STRA	5.920e-190	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
D8LAU9_ECTSI	4.010e-12	33.88	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 72..157

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_9	contig	Contig_9:295754..298813 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|96852	mRNA_3530	Tribonema minus UTEX_B_3156	mRNA	Contig_9 295525..298847 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|96852|CE96851_79 ID=Trimin1|96852|CE96851_79|Name=jgi.p|Trimin1|96852|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=285bp
MTHAHRIPVGVRGMLLVACVYLVDAFQSRILSGSSSFLLRPPTTYAAPQC
LKAGCSSRNAVFHHRARTRLRMASMSGDEDADVDELAERSSPPSSESGAD
AGASAEAAGGSNAPVDWDGAWAAKQKEMGNGDSGSDDSARAVEPPPPPPV
SRPAFAGRKEIIVTGNKEEGYTYTEIDASGRVSRAGEADGGFRLDEDSPQ
LKDARRRIIEKEEQLVEAVAFDQVFVVGGALIAVLLAFMINVGMTGGISD
GASRFRDVELPVNGVPPAVPHPSNQVYPDDDLVV*