Trimin1|95356|CE95355_137 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|95356
Unique Name	Trimin1\|95356\|CE95355_137
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	185

Homology

[Close]

BLAST of jgi.p|Trimin1|95356 vs. uniprot
Match: A0A835YIF9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIF9_9STRA)

HSP 1 Score: 303 bits (776), Expect = 3.440e-103
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0

Query:    1 MPAKGSKKKTSKSPTRKSNAANKEDLDGLDELLADPALMKQFEDKTVPPAKKKTGAENARIGMEGFSQATKNPAMFAEAMSMLSDPNAVKXXXXXXXXXXXXXXXQRHMASLKMDPSFQEAMQTAQSKFQELMQDPEKLQQLQAQVQENGLAALAAAPPADADAAGGAPVSALADLGIDEESTA 184
            MPAKGSKKKTSKSPTRKSNAANKEDLDGLDELLADPALMKQFEDKTVPPAKKKTGAENARIGMEGFSQATKNPAMFAEAMSMLSDPNAVKXXXXXXXXXXXXXXXQRHMASLKMDPSFQEAMQTAQSKFQELMQDPEKLQQLQAQVQENGLAALAAAPPADADAAGGAPVSALADLGIDEESTA
Sbjct:    1 MPAKGSKKKTSKSPTRKSNAANKEDLDGLDELLADPALMKQFEDKTVPPAKKKTGAENARIGMEGFSQATKNPAMFAEAMSMLSDPNAVKXXXXXXXXXXXXXXXQRHMASLKMDPSFQEAMQTAQSKFQELMQDPEKLQQLQAQVQENGLAALAAAPPADADAAGGAPVSALADLGIDEESTA 184

[Close]

BLAST of jgi.p|Trimin1|95356 vs. uniprot
Match: A0A835ZF98_9STRA (EGF-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF98_9STRA)

HSP 1 Score: 129 bits (324), Expect = 2.060e-31
Identity = 105/188 (55.85%), Postives = 121/188 (64.36%), Query Frame = 0

Query:   31 ELLADPALMKQFEDKT-----------------------VPPAKKK---------TGAENARIGMEGFSQATKNPAMFAEAMSMLSDPNAVKXXXXXXXXXXXXXXXQRHMASLKMDPSFQEAMQTAQSKFQELMQDPEKLQQLQAQVQENGLAALAAAPPADADAAGGAPVSA---LADLGIDEEST 183
            ELLAD  LMKQFEDKT                       VPP +K          +GAENARIGMEGF  AT NP MFAEAMSMLSDPNAVKXXXXXXXXXXXXXX Q+HMASLK DP+FQ+AM +AQ+KFQ+L++DP KLQ+LQ+Q  +    A AAA   DA     AP      +AD GIDE ++
Sbjct:  492 ELLADEELMKQFEDKTXXXXXXXXXXXXXXXXXXXXXXTVPPTRKSPDQPRPKPVSGAENARIGMEGFKAATGNPQMFAEAMSMLSDPNAVKXXXXXXXXXXXXXXIQKHMASLKSDPAFQDAMLSAQAKFQDLIKDPTKLQELQSQYAD---IAAAAATTGDAAIEAEAPAEGAEEVADPGIDEATS 676

[Close]

BLAST of jgi.p|Trimin1|95356 vs. uniprot
Match: D7G5P4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5P4_ECTSI)

HSP 1 Score: 101 bits (251), Expect = 4.220e-23
Identity = 69/144 (47.92%), Postives = 102/144 (70.83%), Query Frame = 0

Query:    5 GSKKKT-----SKSPTRKSNAANKEDLDGLDELLADPALMKQFEDKTVPPA--KKKTGAENARIGMEGFSQATKNPAMFAEAMSMLSDPNAVKXXXXXXXXXXXXXXXQRHMASLKMDPSFQEAMQTAQSKFQELMQDPEKLQQ 141
            G+KKK      +K+   +SNAANK+DL GLDE+L++P  M + + + V  +  K ++G +NA+IG++GF+QAT+NPAMF +AMSML DP+   XXXXXXXXX       ++M +LK + +F++AM  AQ K+Q L+ DPEK++Q
Sbjct:    3 GNKKKNKGANKAKNAPARSNAANKDDLAGLDEILSNPEQMAEAQREAVEASGFKPRSGKQNAQIGLKGFTQATQNPAMFKDAMSMLGDPSXXXXXXXXXXXXEFKSEINQYMETLKNNSAFRDAMAEAQRKYQALLADPEKMKQ 146

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|95356 vs. uniprot

BLAST of jgi.p|Trimin1|95356 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A835YIF9_9STRA	3.440e-103	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835ZF98_9STRA	2.060e-31	55.85	EGF-like domain-containing protein n=1 Tax=Tribone...	[more]
D7G5P4_ECTSI	4.220e-23	47.92	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..67
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 87..127
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 152..184
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 95..110

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_86	contig	Contig_86:396043..399255 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|95356	mRNA_13694	Tribonema minus UTEX_B_3156	mRNA	Contig_86 395847..399461 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|95356|CE95355_137 ID=Trimin1|95356|CE95355_137|Name=jgi.p|Trimin1|95356|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=185bp
MPAKGSKKKTSKSPTRKSNAANKEDLDGLDELLADPALMKQFEDKTVPPA
KKKTGAENARIGMEGFSQATKNPAMFAEAMSMLSDPNAVKEAQSMMEDPE
FKREIQRHMASLKMDPSFQEAMQTAQSKFQELMQDPEKLQQLQAQVQENG
LAALAAAPPADADAAGGAPVSALADLGIDEESTA*