Trimin1|89159|CE89158_302 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|89159
Unique NameTrimin1|89159|CE89158_302
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length67
Homology
BLAST of jgi.p|Trimin1|89159 vs. uniprot
Match: A0A835YNA5_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNA5_9STRA)

HSP 1 Score: 143 bits (360), Expect = 1.720e-43
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0
Query:    1 MDNFPRPLTADLKQICMSNCQRLIDIKSYKGRRHLYGYPVRGQRTHTNAKNQKRLHKRWILSTSLDS 67
            MDNFPRPLTADLKQICMSNCQRLIDIKSYKGRRHLYGYPVRGQRTHTNAKNQKRLHKRWILSTSLDS
Sbjct:    1 MDNFPRPLTADLKQICMSNCQRLIDIKSYKGRRHLYGYPVRGQRTHTNAKNQKRLHKRWILSTSLDS 67          
BLAST of jgi.p|Trimin1|89159 vs. uniprot
Match: M4QBU4_HISAR (Ribosomal protein S13 n=1 Tax=Histiona aroides TaxID=392300 RepID=M4QBU4_HISAR)

HSP 1 Score: 62.8 bits (151), Expect = 5.200e-11
Identity = 30/51 (58.82%), Postives = 39/51 (76.47%), Query Frame = 0
Query:    8 LTADLKQICMSNCQRLIDIKSYKGRRHLYGYPVRGQRTHTNAKNQKRLHKR 58
            +  +L++    N +RL+DIKSY+G RH++G PVRGQRTHTNAK QK L KR
Sbjct:   66 IETELRKNQSYNLKRLLDIKSYRGLRHVHGLPVRGQRTHTNAKTQKALSKR 116          
BLAST of jgi.p|Trimin1|89159 vs. uniprot
Match: A0A140F2H0_9EUKA (Ribosomal protein S13 n=1 Tax=Moramonas marocensis TaxID=1805496 RepID=A0A140F2H0_9EUKA)

HSP 1 Score: 62.4 bits (150), Expect = 9.140e-11
Identity = 28/48 (58.33%), Postives = 37/48 (77.08%), Query Frame = 0
Query:    8 LTADLKQICMSNCQRLIDIKSYKGRRHLYGYPVRGQRTHTNAKNQKRL 55
            + + L++I  +N +R I I+SY+G RHLYG PV GQRTHTNAK QK+L
Sbjct:   77 IESQLRKIQQNNIKRFISIRSYRGMRHLYGLPVHGQRTHTNAKTQKKL 124          
BLAST of jgi.p|Trimin1|89159 vs. uniprot
Match: Q9G886_MALJA (Ribosomal protein S13 n=1 Tax=Malawimonas jakobiformis TaxID=136089 RepID=Q9G886_MALJA)

HSP 1 Score: 61.2 bits (147), Expect = 2.170e-10
Identity = 28/46 (60.87%), Postives = 35/46 (76.09%), Query Frame = 0
Query:    8 LTADLKQICMSNCQRLIDIKSYKGRRHLYGYPVRGQRTHTNAKNQK 53
            ++ DL++I   N +R IDIKSY+G RH   YPVRGQRTHTNA+ QK
Sbjct:   66 ISGDLRRIISINIKRYIDIKSYRGLRHKLSYPVRGQRTHTNARTQK 111          
BLAST of jgi.p|Trimin1|89159 vs. uniprot
Match: A0A286QUS7_9PROT (30S ribosomal protein S13 n=1 Tax=Candidatus Nasuia deltocephalinicola TaxID=1160784 RepID=A0A286QUS7_9PROT)

HSP 1 Score: 59.7 bits (143), Expect = 8.130e-10
Identity = 30/55 (54.55%), Postives = 37/55 (67.27%), Query Frame = 0
Query:    7 PLTADLKQICMSNCQRLIDIKSYKGRRHLYGYPVRGQRTHTNAKNQKRLHKRWIL 61
            PL  +L+     N ++LIDIK YKG RH+ G PVRGQRT TNAK  K+L K+  L
Sbjct:   63 PLEGNLRNFINLNIKKLIDIKCYKGFRHIKGLPVRGQRTKTNAKTSKKLRKKINL 117          
BLAST of jgi.p|Trimin1|89159 vs. uniprot
Match: A0A1G1IV71_9BACT (30S ribosomal protein S13 n=1 Tax=Omnitrophica bacterium GWA2_52_12 TaxID=1801816 RepID=A0A1G1IV71_9BACT)

HSP 1 Score: 59.3 bits (142), Expect = 1.280e-9
Identity = 27/43 (62.79%), Postives = 34/43 (79.07%), Query Frame = 0
Query:   11 DLKQICMSNCQRLIDIKSYKGRRHLYGYPVRGQRTHTNAKNQK 53
            DL++    N +RLIDI+SY+G RHL G PVRGQRTHTNA+ +K
Sbjct:   69 DLRREVQQNIRRLIDIRSYRGTRHLRGLPVRGQRTHTNARTRK 111          
BLAST of jgi.p|Trimin1|89159 vs. uniprot
Match: UPI002007EC02 (mitochondrial 30S ribosomal protein S13 n=1 Tax=Antrodia serialis TaxID=139415 RepID=UPI002007EC02)

HSP 1 Score: 59.3 bits (142), Expect = 1.600e-9
Identity = 28/53 (52.83%), Postives = 38/53 (71.70%), Query Frame = 0
Query:    5 PRPLTADLKQICMSNCQRLIDIKSYKGRRHLYGYPVRGQRTHTNAKNQKRLHK 57
            PRPL A+L++    N   L +I SY GRRH  G+PVRGQRTH+NAK  ++L++
Sbjct:   82 PRPLGAELRREIRDNIAHLRNIGSYVGRRHAQGFPVRGQRTHSNAKTARKLNR 134          
BLAST of jgi.p|Trimin1|89159 vs. uniprot
Match: A0A397U0B4_9GLOM (Uncharacterized protein n=1 Tax=Gigaspora rosea TaxID=44941 RepID=A0A397U0B4_9GLOM)

HSP 1 Score: 57.8 bits (138), Expect = 4.790e-9
Identity = 27/53 (50.94%), Postives = 36/53 (67.92%), Query Frame = 0
Query:    8 LTADLKQICMSNCQRLIDIKSYKGRRHLYGYPVRGQRTHTNAKNQKRLHKRWI 60
            +  DLK+  ++N      I +YKG+RH  GYPVRGQRT TNA+  +RL+ RWI
Sbjct:   66 IETDLKREVINNIMHHRSIGTYKGKRHAMGYPVRGQRTKTNARTARRLNGRWI 118          
BLAST of jgi.p|Trimin1|89159 vs. uniprot
Match: A0A2H5XS74_9BACT (30S ribosomal protein S13 n=2 Tax=Bacteria TaxID=2 RepID=A0A2H5XS74_9BACT)

HSP 1 Score: 57.8 bits (138), Expect = 4.890e-9
Identity = 29/55 (52.73%), Postives = 37/55 (67.27%), Query Frame = 0
Query:    8 LTADLKQICMSNCQRLIDIKSYKGRRHLYGYPVRGQRTHTNAKNQKRLHKRWILS 62
            L  DL++    N QRL DIK Y+G RH+ G PVRGQRTH+NA+ +K   K  IL+
Sbjct:   66 LEGDLRREISENIQRLKDIKCYRGLRHIAGLPVRGQRTHSNARTRKGPRKHKILA 120          
BLAST of jgi.p|Trimin1|89159 vs. uniprot
Match: A0A1G1JZI5_9BACT (30S ribosomal protein S13 n=2 Tax=unclassified Candidatus Omnitrophica TaxID=1047005 RepID=A0A1G1JZI5_9BACT)

HSP 1 Score: 57.8 bits (138), Expect = 5.200e-9
Identity = 27/53 (50.94%), Postives = 36/53 (67.92%), Query Frame = 0
Query:    1 MDNFPRPLTADLKQICMSNCQRLIDIKSYKGRRHLYGYPVRGQRTHTNAKNQK 53
            +  F   +  DL++    N +RLIDI+SY+G RHL G PV GQRTHTNA+ +K
Sbjct:   60 IQKFNLKVEGDLRRENQQNIKRLIDIRSYRGSRHLKGLPVHGQRTHTNARTRK 112          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|89159 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YNA5_9STRA1.720e-43100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
M4QBU4_HISAR5.200e-1158.82Ribosomal protein S13 n=1 Tax=Histiona aroides Tax... [more]
A0A140F2H0_9EUKA9.140e-1158.33Ribosomal protein S13 n=1 Tax=Moramonas marocensis... [more]
Q9G886_MALJA2.170e-1060.87Ribosomal protein S13 n=1 Tax=Malawimonas jakobifo... [more]
A0A286QUS7_9PROT8.130e-1054.5530S ribosomal protein S13 n=1 Tax=Candidatus Nasui... [more]
A0A1G1IV71_9BACT1.280e-962.7930S ribosomal protein S13 n=1 Tax=Omnitrophica bac... [more]
UPI002007EC021.600e-952.83mitochondrial 30S ribosomal protein S13 n=1 Tax=An... [more]
A0A397U0B4_9GLOM4.790e-950.94Uncharacterized protein n=1 Tax=Gigaspora rosea Ta... [more]
A0A2H5XS74_9BACT4.890e-952.7330S ribosomal protein S13 n=2 Tax=Bacteria TaxID=2... [more]
A0A1G1JZI5_9BACT5.200e-950.9430S ribosomal protein S13 n=2 Tax=unclassified Can... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR02743730s ribosomal protein S13, C-terminalGENE3D4.10.910.1030s ribosomal protein s13, domain 2coord: 17..64
e-value: 4.9E-17
score: 63.3
IPR001892Ribosomal protein S13PFAMPF00416Ribosomal_S13coord: 9..50
e-value: 4.7E-11
score: 43.2
IPR001892Ribosomal protein S13PROSITEPS50159RIBOSOMAL_S13_2coord: 11..54
score: 16.633429
IPR018269Ribosomal protein S13, conserved sitePROSITEPS00646RIBOSOMAL_S13_1coord: 30..43
IPR010979Ribosomal protein S13-like, H2THSUPERFAMILY46946S13-like H2TH domaincoord: 8..57

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_75contigContig_75:139698..139899 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|89159mRNA_7603Tribonema minus UTEX_B_3156 mRNAContig_75 139698..139950 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|89159|CE89158_302 ID=Trimin1|89159|CE89158_302|Name=jgi.p|Trimin1|89159|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=67bp
MDNFPRPLTADLKQICMSNCQRLIDIKSYKGRRHLYGYPVRGQRTHTNAK
NQKRLHKRWILSTSLDS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR02743730s_Rbsml_prot_S13_C
IPR001892Ribosomal_S13
IPR018269Ribosomal_S13_CS
IPR010979Ribosomal_S13-like_H2TH