Trimin1|88776|CE88775_94 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|88776
Unique NameTrimin1|88776|CE88775_94
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length248
Homology
BLAST of jgi.p|Trimin1|88776 vs. uniprot
Match: A0A836CAA0_9STRA (Snf7-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAA0_9STRA)

HSP 1 Score: 441 bits (1135), Expect = 7.900e-156
Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 0
Query:    1 MNLFGKKKSAASGTPTDPTPTIMKLQETIDTLEKRETHLQKKIKAQLLEAKAKSQTDKKGALFALKRKKMYEAEINKINGARITLEQQKIALEGSNTNLQTFQAMNSGRKAMQAARGQLDVDDVDAVMDDIQEEMDIADQIGEAIARPAEGLFDDDDLLAELGAMEEAEMEETLLAAPAVPARPPSAAMAAGSPTLVVPGGARQPVAAGSGSSGMDLPSVPTGDVRVPAAEEDEDLRALRELEASML 247
            MNLFGKKKSAASGTPTDPTPTIMKLQETIDTLEKRETHLQKKIKAQLLEAKAKSQTDKKGALFALKRKKMYEAEINKINGARITLEQQKIALEGSNTNLQTFQAMNSGRKAMQAARGQLDVDDVDAVMDDIQEEMDIADQIGEAIARPAEGLFDDDDLLAELGAMEEAEMEETLLAAPAVPARPPSAAMAAGSPTLVVPGGARQPVAAGSGSSGMDLPSVPTGDVRVPAAEEDEDLRALRELEASML
Sbjct:    1 MNLFGKKKSAASGTPTDPTPTIMKLQETIDTLEKRETHLQKKIKAQLLEAKAKSQTDKKGALFALKRKKMYEAEINKINGARITLEQQKIALEGSNTNLQTFQAMNSGRKAMQAARGQLDVDDVDAVMDDIQEEMDIADQIGEAIARPAEGLFDDDDLLAELGAMEEAEMEETLLAAPAVPARPPSAAMAAGSPTLVVPGGARQPVAAGSGSSGMDLPSVPTGDVRVPAAEEDEDLRALRELEASML 247          
BLAST of jgi.p|Trimin1|88776 vs. uniprot
Match: D8LAT7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAT7_ECTSI)

HSP 1 Score: 254 bits (648), Expect = 7.390e-82
Identity = 162/250 (64.80%), Postives = 186/250 (74.40%), Query Frame = 0
Query:    1 MNLFGKKKSAASGTPTDPTPTIMKLQETIDTLEKRETHLQKKIKAQLLEAKAKSQT-DKKGALFALKRKKMYEAEINKINGARITLEQQKIALEGSNTNLQTFQAMNSGRKAMQAARGQLDVDDVDAVMDDIQEEMDIADQIGEAIARPAEGLFDDDDLLAELGAMEEAEMEETLLAAPAVPARPPSAAMAAGSPTLVVPGGARQPVAAGSG-SSGMDLPSVP-TGDVRVPAA-EEDEDLRALRELEASM 246
            MNLFGK K+       D T TI+KL+ET+D+L+KRE H+QKKIKAQLL+AKAKS   DK+GALFALKRKKMYE E+NK+NGAR+TLE Q IALEGSN N+QTF AM SG KAMQ ARG+LDVD VD VMDDI++EMDIA+QIG+AIARPA+ LFDDD LL EL  +EEA++EE LLA PAVP   P+A           P G  QP  A S    G +LPSVP T  V  P A EEDED RALRELEASM
Sbjct:    1 MNLFGKAKAKPQAA--DTTSTILKLRETLDSLDKRENHIQKKIKAQLLDAKAKSSAKDKRGALFALKRKKMYEGEVNKLNGARMTLESQIIALEGSNMNMQTFNAMRSGAKAMQDARGRLDVDQVDDVMDDIKDEMDIAEQIGDAIARPADDLFDDDALLEELDMLEEADLEEQLLAPPAVPTARPAA-----------PQGVEQPAVAESKVPEGYELPSVPSTTPVSAPVAVEEDEDARALRELEASM 237          
BLAST of jgi.p|Trimin1|88776 vs. uniprot
Match: A0A7S3NK50_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NK50_9STRA)

HSP 1 Score: 196 bits (499), Expect = 1.660e-59
Identity = 127/252 (50.40%), Postives = 163/252 (64.68%), Query Frame = 0
Query:    1 MNLFGKKKSAASGTP---TDPTPTIMKLQETIDTLEKRETHLQKKIKAQLLEAKAK-SQTDKKGALFALKRKKMYEAEINKINGARITLEQQKIALEGSNTNLQTFQAMNSGRKAMQAARGQLDVDDVDAVMDDIQEEMDIADQIGEAIARPAEGLFDDDDLLAELGAMEEAEMEETLLAAPAVPARPPSAAMAAGSPTLVVPGGARQPVAAGSGSSGMDLPSVPTGDVRVPAAE--EDEDLRALRELEASM 246
            MNLFGKKK+A SGT     DP  TI++L+ T++TLEKR+ HL KKI+ QL EAK K ++ DK+GAL+ LKRKKMYE EI KINGAR+TLEQQ IA+EG+ TN +T +AM +G+ AM  AR  + VDDV  +MDDI +E++ A+ I EAI+ PA  + DD+DLL EL  +EE E+E  LL APAVPA                              + +DLP VPT    +P  +  ED D +ALRELEA+M
Sbjct:    1 MNLFGKKKAAGSGTGGGNVDPAQTILQLRNTVETLEKRQVHLDKKIEQQLAEAKVKIAKKDKRGALYCLKRKKMYEGEIEKINGARLTLEQQMIAIEGTVTNSETVKAMTAGKDAMAKARAGVTVDDVGELMDDITDEVEQANDIAEAISAPANQVLDDEDLLNELNELEELELESQLLDAPAVPA------------------------------TAIDLPDVPTATPEIPVQQNQEDADTKALRELEAAM 222          
BLAST of jgi.p|Trimin1|88776 vs. uniprot
Match: A0A7S3XYN0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XYN0_HETAK)

HSP 1 Score: 189 bits (480), Expect = 1.780e-56
Identity = 125/250 (50.00%), Postives = 166/250 (66.40%), Query Frame = 0
Query:    1 MNLFGKKKSAASGTPTDPTPTIMKLQETIDTLEKRETHLQKKIKAQLLEAKAK-SQTDKKGALFALKRKKMYEAEINKINGARITLEQQKIALEGSNTNLQTFQAMNSGRKAMQAARGQLDVDDVDAVMDDIQEEMDIADQIGEAIARPAEGLFDDDDLLAELGAMEEAEMEETLLAAPAVPARPPSAAMAAGSPTLVVPGGARQPVAAGSGSSGMDLPSVPTGDVRVPAAEED---EDLRALRELEASM 246
            MNLFGKKK AA    T+   TI++L+ TI+TL+KRET +  KI  Q  EAKAK  + D++GA+F LKRKKMYE EI+K+NGA++ LEQQ  ALEG++ N + F+A  +   A++AARG +D D V+  +DDI EEM++A++IGEAI+RPA+ LF+D++LL EL  +EE  +EE LLAAPA P R P AA  A          A+QP          DLP+ PTG V   A + D   +DL ALR LEA +
Sbjct:    1 MNLFGKKKKAAVPAATNTADTIIRLRGTIETLDKRETFIAAKIVQQTNEAKAKLKKKDQRGAMFCLKRKKMYEKEIDKLNGAKLQLEQQIFALEGAHINTEAFEASRAAVGALKAARGNIDADTVEETLDDINEEMELANEIGEAISRPAQELFEDEELLDELRELEELGVEEDLLAAPAAPVRAPPAAAVAEE--------AKQPA--------YDLPAAPTGAVAASAIQGDVDADDLDALRALEAEL 234          
BLAST of jgi.p|Trimin1|88776 vs. uniprot
Match: A0A482SS87_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SS87_9ARCH)

HSP 1 Score: 188 bits (477), Expect = 4.460e-56
Identity = 130/256 (50.78%), Postives = 161/256 (62.89%), Query Frame = 0
Query:    1 MNLFGKKKSAASGTPTD-PTPTIMKLQETIDTLEKRETHLQKKIKAQLLEAKAKSQT-DKKGALFALKRKKMYEAEINKINGARITLEQQKIALEGSNTNLQTFQAMNSGRKAMQAARGQLDVDDVDAVMDDIQEEMDIADQIGEAIARPAEGLFDDDDLLAELGAMEEAEMEETLL--AAPAVPARPPSAAMAAGSPTLVVPGGARQPVAAGSGSSGMDLPSVPTGDVR-VP----AAEEDEDLRALRELEASML 247
            MNLFGKKK A    PT  P  TI KL+E+++ LEKRE H+ KKI A L EAK KSQ  DK GALFALKRKK+YEAE+ K+ GARIT+E Q ++LE ++ N++TF+AM +G  AM+A RG +D D VD VMD + EE DI D I EAI+RP + LF+D++LL EL  ++  EME ++    APA P  PP                           S  + P+VPT  V  VP    A EEDED RALRELEASML
Sbjct:    1 MNLFGKKKQAQQPVPTQSPIETIAKLRESLNILEKREEHINKKIDASLQEAKLKSQKKDKNGALFALKRKKLYEAEVAKLQGARITMETQILSLESASVNIETFKAMKTGANAMKAMRGDIDADKVDDVMDALAEEKDIQDAISEAISRPGQDLFNDEELLDELAELDALEMEASVANTVAPAAPVAPPP-------------------------QSVFNFPAVPTKAVSPVPSKPVAHEEDEDERALRELEASML 231          
BLAST of jgi.p|Trimin1|88776 vs. uniprot
Match: A0A7S2B2J5_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B2J5_9STRA)

HSP 1 Score: 176 bits (446), Expect = 7.950e-51
Identity = 118/259 (45.56%), Postives = 156/259 (60.23%), Query Frame = 0
Query:    1 MNLFGKKKSAASG----------TPTDPTPTIMKLQETIDTLEKRETHLQKKIKAQLLEAKAK-SQTDKKGALFALKRKKMYEAEINKINGARITLEQQKIALEGSNTNLQTFQAMNSGRKAMQAARGQLDVDDVDAVMDDIQEEMDIADQIGEAIARPAE-GLFDDDDLLAELGAMEEAEMEETLLAAPAVPARPPSAAMAAGSPTLVVPGGARQPVAAGSGSSGMDLPSVPTGDVRVPAAEEDEDLRALRELEASML 247
            MN+FG+ ++   G             D    I+KL+ T++TL+KRE H+  KI AQ  EAKAK ++ DKKGAL  +KRKKM+E EI KI GAR+TLEQQ +ALE +  N+QTF AMN G++A++AARG +D D +   MDDI+EEMD AD I  A+  P +  L DDD+LLAEL  ME+ ++E+ LL  P+VP   P                       G+    +DLP  PT  V V    ED++L ALRELEASM+
Sbjct:   40 MNIFGRPRNTGGGGGKQPVRARQAAPDAAQAILKLRGTVETLDKREAHIGTKITAQTAEAKAKLAKKDKKGALICMKRKKMFENEITKIQGARMTLEQQMMALENAAMNMQTFGAMNEGKQALKAARGGMDADTIGDTMDDIREEMDEADAIATALGAPLDDALEDDDELLAELNMMEQDDLEDKLLNPPSVPTSTP----------------------VGAAEDILDLPDAPTSQVVVDGDVEDDELAALRELEASMM 276          
BLAST of jgi.p|Trimin1|88776 vs. uniprot
Match: A0A1W0A9Q0_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A9Q0_9STRA)

HSP 1 Score: 174 bits (442), Expect = 1.060e-50
Identity = 119/254 (46.85%), Postives = 160/254 (62.99%), Query Frame = 0
Query:    1 MNLFGKKKSAASGT-PTDPTPTIMKLQETIDTLEKRETHLQKKIKAQLLEAKAKSQT-DKKGALFALKRKKMYEAEINKINGARITLEQQKIALEGSNTNLQTFQAMNSGRKAMQAARGQLDVDDVDAVMDDIQEEMDIADQIGEAIARP-AEGLFDDDDLLAELGAMEEAEMEETLLAA-----PAVPARPPSAAMAAGSPTLVVPGGARQPVAAGSGSSGMDLPSVPTGDVRVPAAEEDEDLRALRELEASM 246
            MNLFG+K +A   T P +   TI KL+E +D LEKRE+H++KKI+AQL EAK KS   DK+GA+F LKRKKMYE+EI K+ GAR+TLE Q + LE +  N+QTF A+ +G   M+A  GQ++VD VD +MDDIQEEM  AD+IG AI++P    L+DDD+L AEL  + E ++E+ L AA     PA PAR P+ A A  +     P                + PS    +++V    + ++L  LR LEASM
Sbjct:    1 MNLFGRKAAAPVKTGPAETAETIRKLREQLDILEKRESHIEKKIEAQLEEAKKKSAAKDKRGAIFCLKRKKMYESEIEKLQGARMTLETQVMTLESTQVNMQTFTALRTGANQMKAIHGQMNVDSVDDIMDDIQEEMATADEIGRAISQPLGNALYDDDELAAELDMLVEEDLEKQLDAAHQQPAPAQPARVPAQAPATAASMFTFP----------------EAPSHAVTNIKVSGKADADELEELRRLEASM 238          
BLAST of jgi.p|Trimin1|88776 vs. uniprot
Match: A0A7S2RAI7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RAI7_9STRA)

HSP 1 Score: 175 bits (443), Expect = 1.160e-50
Identity = 117/254 (46.06%), Postives = 160/254 (62.99%), Query Frame = 0
Query:    1 MNLFGKKKSAAS----GTPTDPTPTIMKLQETIDTLEKRETHLQKKIKAQLLEAKAKSQT-DKKGALFALKRKKMYEAEINKINGARITLEQQKIALEGSNTNLQTFQAMNSGRKAMQAARGQLDVDDVDAVMDDIQEEMDIADQIGEAIARPA-EGLFDDDDLLAELGAMEEAEMEETLLAAPAVPARPPSAAMAAGSPTLVVPGGARQPVAAGSGSSGMDLPSVPTGDVRVPAA--EEDEDLRALRELEASM 246
            MN FG+ ++  +     TP D   +I+KL+ T+DTL+KRE H+QKKI AQ+ EA+   +  DK+ AL+ +KRKKM+E E++KI GAR+TLEQQ +ALE S T ++TF+AM  G + M+A R  +D D V   MDDI++E++ A+ I  AI  P  +GL D++ LLAEL  ME+ E+E+TLL  PAVPA  P+                             +LP+VPTG + +PAA  EEDEDL ALRELEA M
Sbjct:   27 MNFFGRPRNQPARQQQSTP-DVAQSILKLRTTVDTLDKREVHIQKKIDAQIQEARQNMKKGDKRSALYCMKRKKMFEGEVDKIRGARMTLEQQALALESSATTMETFKAMREGNQTMRALRANVDADTVGETMDDIRDEIEEANDISAAIGEPLNDGLEDEEALLAELNEMEQLELEQTLLGTPAVPAAAPALG---------------------------ELPAVPTGAISMPAAGVEEDEDLAALRELEADM 252          
BLAST of jgi.p|Trimin1|88776 vs. uniprot
Match: A0A6G0XHZ3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XHZ3_9STRA)

HSP 1 Score: 174 bits (441), Expect = 1.840e-50
Identity = 123/252 (48.81%), Postives = 162/252 (64.29%), Query Frame = 0
Query:    1 MNLFGKKKSAASGT-PTDPTPTIMKLQETIDTLEKRETHLQKKIKAQLLEAKAKSQT-DKKGALFALKRKKMYEAEINKINGARITLEQQKIALEGSNTNLQTFQAMNSGRKAMQAARGQLDVDDVDAVMDDIQEEMDIADQIGEAIARP-AEGLFDDDDLLAELGAMEEAEMEETLLAAPAVPARPPSAAMAAGSPTLVVPGGARQPVAAGSGSSGMDLPSVPT---GDVRVPAAEEDEDLRALRELEASM 246
            MNLFG+K  A   T P+D   TI KL+E +DTLEKRE+H++KKI  QL EAK KS   DK+GA+F LKRKKMYE+EI K+ GAR+TLE Q + LE +  N+ TFQAM  G + M+A  GQ++V+ VD +MDDIQEEM  A++I +AI++P    L+DDD+L +EL A+E+  MEE L  A A P   P+A      P    P    QP  A S +  ++LP  PT     V+V    + ++L  LR LEASM
Sbjct:    1 MNLFGRKAPAPVRTSPSDTAETIRKLREQLDTLEKRESHIEKKIALQLEEAKKKSAAKDKRGAIFCLKRKKMYESEIEKLQGARMTLETQVMTLESTQVNMATFQAMRVGTQQMKAIHGQMNVESVDDIMDDIQEEMATANEIAQAISQPIGNTLYDDDELESELAALEDLAMEEEL--ANATPVAAPAAVRPPAQPVAQRP----QPAQAVSPAV-LNLPEAPTHAVSQVKVTGKADADELEELRRLEASM 245          
BLAST of jgi.p|Trimin1|88776 vs. uniprot
Match: F0YIX7_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YIX7_AURAN)

HSP 1 Score: 172 bits (435), Expect = 8.170e-50
Identity = 107/186 (57.53%), Postives = 129/186 (69.35%), Query Frame = 0
Query:    1 MNLFGKKKS-AASGTPTDPTPTIMKLQETIDTLEKRETHLQKKIKAQLLEAKAK-SQTDKKGALFALKRKKMYEAEINKINGARITLEQQKIALEGSNTNLQTFQAMNSGRKAMQAARGQLDVDDVDAVMDDIQEEMDIADQIGEAIARPAEGLFDDDDLLAELGAMEEAEMEETLLAAPAVPARP 184
            MNLFG+KKS AA G P+DP  TI+KL+ T++TLEKR+ HL KKI+ Q  EAK K  + DK+GAL+ LKRKKMYEAEI KINGAR+TLEQQ IA+E + TN +T  AM SG KAMQAAR  +D D V  +MDD             AI+ PA  + +DDDLL EL  MEE E+E  LL AP +PA P
Sbjct:    1 MNLFGRKKSPAAPGGPSDPAQTILKLRSTVETLEKRQVHLDKKIEQQTKEAKEKMGKKDKRGALYCLKRKKMYEAEIEKINGARLTLEQQMIAIEATVTNAETVNAMKSGAKAMQAARQNVDADTVGDLMDDXXXXXXXXXXXXXAISAPANDVLNDDDLLNELNEMEELELESQLLDAPPIPAMP 186          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|88776 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CAA0_9STRA7.900e-156100.00Snf7-domain-containing protein n=1 Tax=Tribonema m... [more]
D8LAT7_ECTSI7.390e-8264.80Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S3NK50_9STRA1.660e-5950.40Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S3XYN0_HETAK1.780e-5650.00Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A482SS87_9ARCH4.460e-5650.78Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A7S2B2J5_9STRA7.950e-5145.56Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A1W0A9Q0_9STRA1.060e-5046.85Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A7S2RAI7_9STRA1.160e-5046.06Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A6G0XHZ3_9STRA1.840e-5048.81Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
F0YIX7_AURAN8.170e-5057.53Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 68..88
NoneNo IPR availableCOILSCoilCoilcoord: 22..42
NoneNo IPR availableGENE3D1.10.287.1060coord: 17..93
e-value: 1.2E-23
score: 85.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 201..247
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 227..247
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availablePANTHERPTHR22761:SF10CHARGED MULTIVESICULAR BODY PROTEIN 4Ccoord: 2..188
IPR005024Snf7 familyPFAMPF03357Snf7coord: 22..183
e-value: 6.8E-38
score: 130.0
IPR005024Snf7 familyPANTHERPTHR22761CHARGED MULTIVESICULAR BODY PROTEINcoord: 2..188

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_74contigContig_74:402226..405114 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|88776mRNA_10556Tribonema minus UTEX_B_3156 mRNAContig_74 402141..405179 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|88776|CE88775_94 ID=Trimin1|88776|CE88775_94|Name=jgi.p|Trimin1|88776|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=248bp
MNLFGKKKSAASGTPTDPTPTIMKLQETIDTLEKRETHLQKKIKAQLLEA
KAKSQTDKKGALFALKRKKMYEAEINKINGARITLEQQKIALEGSNTNLQ
TFQAMNSGRKAMQAARGQLDVDDVDAVMDDIQEEMDIADQIGEAIARPAE
GLFDDDDLLAELGAMEEAEMEETLLAAPAVPARPPSAAMAAGSPTLVVPG
GARQPVAAGSGSSGMDLPSVPTGDVRVPAAEEDEDLRALRELEASML*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005024Snf7_fam