Trimin1|87896|CE87895_63 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|87896
Unique NameTrimin1|87896|CE87895_63
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length110
Homology
BLAST of jgi.p|Trimin1|87896 vs. uniprot
Match: A0A835YNQ0_9STRA (CDGSH iron sulfur domain-containing protein 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNQ0_9STRA)

HSP 1 Score: 220 bits (561), Expect = 7.840e-73
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0
Query:    1 MVELVLTENVLKIIVAVLSMAVAILLHLRRSASTSGNRCNHSIQLDNPKVVDKVGFTEIEELPSCKKNGTAVFCRCWKSKNFPYCDGSHATHNRETGDNVGPLIIAKDK 109
            MVELVLTENVLKIIVAVLSMAVAILLHLRRSASTSGNRCNHSIQLDNPKVVDKVGFTEIEELPSCKKNGTAVFCRCWKSKNFPYCDGSHATHNRETGDNVGPLIIAKDK
Sbjct:    1 MVELVLTENVLKIIVAVLSMAVAILLHLRRSASTSGNRCNHSIQLDNPKVVDKVGFTEIEELPSCKKNGTAVFCRCWKSKNFPYCDGSHATHNRETGDNVGPLIIAKDK 109          
BLAST of jgi.p|Trimin1|87896 vs. uniprot
Match: J3JTG0_DENPD (CDGSH iron-sulfur domain-containing protein 2 homolog n=1 Tax=Dendroctonus ponderosae TaxID=77166 RepID=J3JTG0_DENPD)

HSP 1 Score: 100 bits (249), Expect = 4.940e-25
Identity = 43/78 (55.13%), Postives = 55/78 (70.51%), Query Frame = 0
Query:   30 RSASTSGNRCNHSIQLDNPKVVDKVGFTEIEELPSCKKNGTAVFCRCWKSKNFPYCDGSHATHNRETGDNVGPLIIAK 107
            ++      RCN++IQL NPKVVD +   +I +         AVFCRCWKSKN+PYCDGSHA HN+ETGDN+GP+I+ K
Sbjct:   60 KARKCGSGRCNNAIQLTNPKVVDTIDVEDITD--------KAVFCRCWKSKNWPYCDGSHAAHNKETGDNLGPVIVKK 129          
BLAST of jgi.p|Trimin1|87896 vs. uniprot
Match: A0A183CTC9_GLOPA (ZnF_CDGSH domain-containing protein n=1 Tax=Globodera pallida TaxID=36090 RepID=A0A183CTC9_GLOPA)

HSP 1 Score: 96.3 bits (238), Expect = 5.370e-24
Identity = 46/80 (57.50%), Postives = 55/80 (68.75%), Query Frame = 0
Query:   30 RSASTSGNRCNHSIQLDNPKVVDKVGFTEIEELPSCKKNGTAVFCRCWKSKNFPYCDGSHATHNRETGDNVGPLIIAKDK 109
            RSA+T   RCN  +QLD  KVVD +   E+E++   K      FCRCW+SK FPYCDG+H  HN+ETGDNVGPLII K K
Sbjct:    4 RSAATKLARCNKRVQLDKDKVVDTL---ELEDIGQMK-----AFCRCWQSKKFPYCDGTHNAHNKETGDNVGPLIIQKAK 75          
BLAST of jgi.p|Trimin1|87896 vs. uniprot
Match: A0A6J2Y349_SITOR (CDGSH iron-sulfur domain-containing protein 2 homolog n=1 Tax=Sitophilus oryzae TaxID=7048 RepID=A0A6J2Y349_SITOR)

HSP 1 Score: 97.4 bits (241), Expect = 8.040e-24
Identity = 42/72 (58.33%), Postives = 51/72 (70.83%), Query Frame = 0
Query:   38 RCNHSIQLDNPKVVDKVGFTEIEELPSCKKNGTAVFCRCWKSKNFPYCDGSHATHNRETGDNVGPLIIAKDK 109
            R N  +QL NPKVVD +   +I E         A FCRCWKSKN+PYCDGSHA HN+ETGDN+GP+I+ K+K
Sbjct:   68 RTNKIVQLSNPKVVDTIDVEDISE--------KAAFCRCWKSKNWPYCDGSHANHNKETGDNIGPVIVKKNK 131          
BLAST of jgi.p|Trimin1|87896 vs. uniprot
Match: A0A834M2Q6_RHYFE (CDGSH iron-sulfur domain-containing protein 2 homolog n=1 Tax=Rhynchophorus ferrugineus TaxID=354439 RepID=A0A834M2Q6_RHYFE)

HSP 1 Score: 97.4 bits (241), Expect = 8.040e-24
Identity = 46/77 (59.74%), Postives = 54/77 (70.13%), Query Frame = 0
Query:   33 STSGNRCNHSIQLDNPKVVDKVGFTEIEELPSCKKNGTAVFCRCWKSKNFPYCDGSHATHNRETGDNVGPLIIAKDK 109
            S SG + N  IQL NPKVVD +   +I        +G A FCRCWKSKN+PYCDGSHA HN+ETGDNVGP+I+ K K
Sbjct:   64 SCSG-KLNQVIQLSNPKVVDTIDVEDI--------SGKAAFCRCWKSKNWPYCDGSHAAHNKETGDNVGPVIVKKAK 131          
BLAST of jgi.p|Trimin1|87896 vs. uniprot
Match: A0A662YE53_9STRA (ZnF_CDGSH domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YE53_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 1.750e-23
Identity = 43/70 (61.43%), Postives = 50/70 (71.43%), Query Frame = 0
Query:   38 RCNHSIQLDNPKVVDKVGFTEIEELPSCKKNGTAVFCRCWKSKNFPYCDGSHATHNRETGDNVGPLIIAK 107
            R N  IQL+  KVVD V   E+E+L S  KNG    CRCWKSK FP+CDGSH  HN+ETGDNVGPL++ K
Sbjct:   67 RLNRQIQLEKEKVVDFVSVPEVEDLLS--KNGKCTVCRCWKSKKFPFCDGSHQKHNKETGDNVGPLVLQK 134          
BLAST of jgi.p|Trimin1|87896 vs. uniprot
Match: A0A482T5K1_9ARCH (CDGSH iron-sulfur domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T5K1_9ARCH)

HSP 1 Score: 97.1 bits (240), Expect = 2.110e-23
Identity = 41/70 (58.57%), Postives = 53/70 (75.71%), Query Frame = 0
Query:   38 RCNHSIQLDNPKVVDKVGFTEIEELPSCKKNGTAVFCRCWKSKNFPYCDGSHATHNRETGDNVGPLIIAK 107
            R N+ ++LD+PKVVD V   ++E++   K +G  + CRCWKS+ FPYCDGSH  HN+ETGDNVGPLII K
Sbjct:   86 RINNKVKLDSPKVVDMVKCADMEDMAQYK-DGKLIMCRCWKSETFPYCDGSHVRHNKETGDNVGPLIIQK 154          
BLAST of jgi.p|Trimin1|87896 vs. uniprot
Match: A0A1W4WPU7_AGRPL (CDGSH iron-sulfur domain-containing protein 2 homolog n=1 Tax=Agrilus planipennis TaxID=224129 RepID=A0A1W4WPU7_AGRPL)

HSP 1 Score: 95.1 bits (235), Expect = 6.330e-23
Identity = 42/70 (60.00%), Postives = 49/70 (70.00%), Query Frame = 0
Query:   38 RCNHSIQLDNPKVVDKVGFTEIEELPSCKKNGTAVFCRCWKSKNFPYCDGSHATHNRETGDNVGPLIIAK 107
            R NH I   NPKVVD V   +I +         AVFCRCWKSKN+PYCDGSH +HN+ETGDNVGPL++ K
Sbjct:   67 RVNHIIHRSNPKVVDTVDVEDITD--------KAVFCRCWKSKNWPYCDGSHGSHNKETGDNVGPLVVKK 128          
BLAST of jgi.p|Trimin1|87896 vs. uniprot
Match: A0A2H2IJT2_CAEJA (ZnF_CDGSH domain-containing protein n=1 Tax=Caenorhabditis japonica TaxID=281687 RepID=A0A2H2IJT2_CAEJA)

HSP 1 Score: 94.0 bits (232), Expect = 8.550e-23
Identity = 43/72 (59.72%), Postives = 52/72 (72.22%), Query Frame = 0
Query:   38 RCNHSIQLDNPKVVDKVGFTEIEELPSCKKNGTAVFCRCWKSKNFPYCDGSHATHNRETGDNVGPLIIAKDK 109
            RCN+ I+LD+ KV D V   +I E    KK    V+CRCWKSKN+PYCDGSH  HN+ETGDNVGPLI+  +K
Sbjct:   39 RCNNLIKLDSKKVADTVDIEDIGE----KK----VYCRCWKSKNWPYCDGSHGAHNKETGDNVGPLIVKSEK 102          
BLAST of jgi.p|Trimin1|87896 vs. uniprot
Match: A0A024GE78_9STRA (ZnF_CDGSH domain-containing protein n=2 Tax=Albugo TaxID=65356 RepID=A0A024GE78_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 8.750e-23
Identity = 43/72 (59.72%), Postives = 51/72 (70.83%), Query Frame = 0
Query:   38 RCNHSIQLDNPKVVDKVGFTEIEELPSCKKNGTAVFCRCWKSKNFPYCDGSHATHNRETGDNVGPLIIAKDK 109
            R N SI+L + KVVD +  T++E+L   K +G  V CRCWKSK FPYCDGSH  HN+ TGDNVGPLII   K
Sbjct:   71 RINGSIKLSSAKVVDTLKITDVEDL-CAKGDGKCVMCRCWKSKTFPYCDGSHTKHNKATGDNVGPLIIQSGK 141          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|87896 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YNQ0_9STRA7.840e-73100.00CDGSH iron sulfur domain-containing protein 1 n=1 ... [more]
J3JTG0_DENPD4.940e-2555.13CDGSH iron-sulfur domain-containing protein 2 homo... [more]
A0A183CTC9_GLOPA5.370e-2457.50ZnF_CDGSH domain-containing protein n=1 Tax=Globod... [more]
A0A6J2Y349_SITOR8.040e-2458.33CDGSH iron-sulfur domain-containing protein 2 homo... [more]
A0A834M2Q6_RHYFE8.040e-2459.74CDGSH iron-sulfur domain-containing protein 2 homo... [more]
A0A662YE53_9STRA1.750e-2361.43ZnF_CDGSH domain-containing protein n=2 Tax=Nothop... [more]
A0A482T5K1_9ARCH2.110e-2358.57CDGSH iron-sulfur domain-containing protein n=1 Ta... [more]
A0A1W4WPU7_AGRPL6.330e-2360.00CDGSH iron-sulfur domain-containing protein 2 homo... [more]
A0A2H2IJT2_CAEJA8.550e-2359.72ZnF_CDGSH domain-containing protein n=1 Tax=Caenor... [more]
A0A024GE78_9STRA8.750e-2359.72ZnF_CDGSH domain-containing protein n=2 Tax=Albugo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018967Iron-binding zinc finger, CDGSH typeSMARTSM00704znf_cdgshcoord: 49..95
e-value: 4.7E-12
score: 56.0
IPR018967Iron-binding zinc finger, CDGSH typePFAMPF09360zf-CDGSHcoord: 48..89
e-value: 6.2E-11
score: 42.4
IPR042216MitoNEET, CDGSH iron-sulfur domainGENE3D3.40.5.90coord: 59..109
e-value: 1.0E-22
score: 81.5
IPR045131CDGSH iron-sulfur domain-containing protein 1/2PANTHERPTHR13680CDGSH IRON-SULFUR DOMAIN-CONTAINING PROTEIN 1coord: 22..108

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_72contigContig_72:393717..395777 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|87896mRNA_13446Tribonema minus UTEX_B_3156 mRNAContig_72 393406..395917 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|87896|CE87895_63 ID=Trimin1|87896|CE87895_63|Name=jgi.p|Trimin1|87896|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=110bp
MVELVLTENVLKIIVAVLSMAVAILLHLRRSASTSGNRCNHSIQLDNPKV
VDKVGFTEIEELPSCKKNGTAVFCRCWKSKNFPYCDGSHATHNRETGDNV
GPLIIAKDK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018967FeS-contain_CDGSH-typ
IPR042216MitoNEET_CISD
IPR045131CISD1/2