Trimin1|8701|CE8700_11 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|8701
Unique Name	Trimin1\|8701\|CE8700_11
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	82

Homology

[Close]

BLAST of jgi.p|Trimin1|8701 vs. uniprot
Match: A0A836CNH9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNH9_9STRA)

HSP 1 Score: 165 bits (417), Expect = 9.630e-52
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0

Query:    1 MVLVSCLLSMHCVLCLSSPCNLLPGHDVYHVQGMDWRQTCSALAQLSTEQQPAKDGKSSTYVIYVLEVPEAGPVEKRVQEV 81
            MVLVSCLLSMHCVLCLSSPCNLLPGHDVYHVQGMDWRQTCSALAQLSTEQQPAKDGKSSTYVIYVLEVPEAGPVEKRVQEV
Sbjct:    1 MVLVSCLLSMHCVLCLSSPCNLLPGHDVYHVQGMDWRQTCSALAQLSTEQQPAKDGKSSTYVIYVLEVPEAGPVEKRVQEV 81

[Close]

BLAST of jgi.p|Trimin1|8701 vs. uniprot
Match: A0A836CG93_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG93_9STRA)

HSP 1 Score: 113 bits (282), Expect = 5.850e-31
Identity = 54/61 (88.52%), Postives = 57/61 (93.44%), Query Frame = 0

Query:    1 MVLVSCLLSMHCVLCLSSPCNLLPGHDVYHVQGMDWRQTCSALAQLSTEQQPAKDGKSSTY 61
            MVLVSCLLSMH VLCLSSPCNLLPGHDVYHVQGMDWRQTC+ALAQLSTEQQPAKD  S+ +
Sbjct:   22 MVLVSCLLSMHSVLCLSSPCNLLPGHDVYHVQGMDWRQTCTALAQLSTEQQPAKDAASTQH 82

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|8701 vs. uniprot

BLAST of jgi.p|Trimin1|8701 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A836CNH9_9STRA	9.630e-52	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CG93_9STRA	5.850e-31	88.52	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_111	contig	Contig_111:508477..508722 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|8701	mRNA_11931	Tribonema minus UTEX_B_3156	mRNA	Contig_111 508322..508756 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|8701|CE8700_11 ID=Trimin1|8701|CE8700_11|Name=jgi.p|Trimin1|8701|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=82bp
MVLVSCLLSMHCVLCLSSPCNLLPGHDVYHVQGMDWRQTCSALAQLSTEQ
QPAKDGKSSTYVIYVLEVPEAGPVEKRVQEV*