Trimin1|86514|CE86513_384 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|86514
Unique NameTrimin1|86514|CE86513_384
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length239
Homology
BLAST of jgi.p|Trimin1|86514 vs. uniprot
Match: A0A835YMI2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMI2_9STRA)

HSP 1 Score: 340 bits (872), Expect = 4.580e-116
Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 0
Query:    1 MHATSAVALVAVLATAGAFAPATPLVAPRCTASMKMALRPDDFVPSELFMQQYLGQDGIRYSMGKTPQEIETEGDYGFFEAIFGQTSNNAAKMELKKQARESAKKVLYTERAKEWLVKYGYPRAFPAYVDNSGEDAAESAPVVKAAMAAVAEPVAAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASATKSAPKAGRVIAAKPVAXXXXXXXXXXXXXXXXXPKGNLANLPKRSSK 238
            MHATSAVALVAVLATAGAFAPATPLVAPRCTASMKMALRPDDFVPSELFMQQYLGQDGIRYSMGKTPQEIETEGDYGFFEAIFGQTSNNAAKMELKKQARESAKKVLYTERAKEWLVKYGYPRAFPAYVDNSGEDAAESAPVVKAAMAAVAEPVAAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASATKSAPKAGRVIAAKPVAXXXXXXXXXXXXXXXXXPKGNLANLPKRSSK
Sbjct:    1 MHATSAVALVAVLATAGAFAPATPLVAPRCTASMKMALRPDDFVPSELFMQQYLGQDGIRYSMGKTPQEIETEGDYGFFEAIFGQTSNNAAKMELKKQARESAKKVLYTERAKEWLVKYGYPRAFPAYVDNSGEDAAESAPVVKAAMAAVAEPVAAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASATKSAPKAGRVIAAKPVAXXXXXXXXXXXXXXXXXPKGNLANLPKRSSK 238          
BLAST of jgi.p|Trimin1|86514 vs. uniprot
Match: A0A7S2V2P5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2P5_9STRA)

HSP 1 Score: 114 bits (284), Expect = 2.410e-28
Identity = 54/97 (55.67%), Postives = 71/97 (73.20%), Query Frame = 0
Query:   41 DDFVPSELFMQQYLGQDGIRYSMGKTPQEIETEGDYGFFEAIFGQTSNNAAKMELKKQARESAKKVL--YTERAKEWLVKYGYPRAFPAYVDNSGED 135
            ++FVPSE ++  YLG++G+RY+M KTPQE+ETEGDY   + +FGQTSNN A++ELKK AR  A  +     E  + WL K+GY R FPAYVD SGE+
Sbjct:   47 EEFVPSETWLADYLGENGLRYAMNKTPQELETEGDYPLLDRLFGQTSNNGARLELKKVARAKANSLTAEQEEEKQSWLSKFGYGRFFPAYVDKSGEN 143          
BLAST of jgi.p|Trimin1|86514 vs. uniprot
Match: D8LIG5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIG5_ECTSI)

HSP 1 Score: 97.4 bits (241), Expect = 5.170e-21
Identity = 49/100 (49.00%), Postives = 62/100 (62.00%), Query Frame = 0
Query:   34 MKMALRPDDFVPSELFMQQYLGQDGIRYSMGKTPQEIETEGDYGFFEAIFGQTSNNAAKMELKKQARESAKKVLYTERAKEWLVKYGYPRAFPAYVDNSG 133
            M  +L+  DF+PSE ++ +YLG+ G+RY M KT +E+  EGDY   E IFGQTSNNA +M+LK +    A         K W  KYGY R FP YVD SG
Sbjct:   45 MGWSLKEADFIPSEEWLGEYLGEQGLRYRMDKTEKEVAEEGDYTLLEKIFGQTSNNAERMKLKAEVLAKADIPTNPSLYKTWTEKYGYGRFFPVYVDKSG 144          
BLAST of jgi.p|Trimin1|86514 vs. uniprot
Match: W7TTW2_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TTW2_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 2.110e-15
Identity = 62/157 (39.49%), Postives = 81/157 (51.59%), Query Frame = 0
Query:    9 LVAVLATAGAFAPATPLVAPRCTASMKMALRP---DDF---VPSELFMQQYLGQDGIRYSMGKTPQEIETEGDYGFFEAIFGQTSNNAAKMELKKQARESAKKVLYTERA---KEWLVKYGYPRAFPAYVDNSG-EDAAESAPVVKAAMAAVAEPVA 155
            LVA+ A  G  A   P+ APR    +         DD+   + SE  +  YL ++G RY + KTP+E+E EGDY  FE +FG TSNNAA+M  +   R         ++A   KEW+ KYGY R   +YVD S  E    +AP   AA A  A P A
Sbjct:   83 LVALSAIVGCSAFLAPMPAPRQLTRVHAGASAGGDDDWKNIINSEANLASYLSEEGFRYCLNKTPEELEKEGDYNIFEKMFGATSNNAARMAARSFGRSLTIDAYDAKKAAENKEWVAKYGYKRWVTSYVDKSDLETEKGAAPAAVAASAKKAAPPA 239          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|86514 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A835YMI2_9STRA4.580e-116100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2V2P5_9STRA2.410e-2855.67Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
D8LIG5_ECTSI5.170e-2149.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
W7TTW2_9STRA2.110e-1539.49Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 214..238

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_7contigContig_7:1500808..1506380 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|86514mRNA_2631Tribonema minus UTEX_B_3156 mRNAContig_7 1500747..1506525 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|86514|CE86513_384 ID=Trimin1|86514|CE86513_384|Name=jgi.p|Trimin1|86514|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=239bp
MHATSAVALVAVLATAGAFAPATPLVAPRCTASMKMALRPDDFVPSELFM
QQYLGQDGIRYSMGKTPQEIETEGDYGFFEAIFGQTSNNAAKMELKKQAR
ESAKKVLYTERAKEWLVKYGYPRAFPAYVDNSGEDAAESAPVVKAAMAAV
AEPVAAVKAAAPKIAAVAKKAAATVKAAPAAPKAAPVASATKSAPKAGRV
IAAKPVAAAAAAAPRAAVTRSAPKPKGNLANLPKRSSK*
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