Trimin1|86003|CE86002_33 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|86003
Unique NameTrimin1|86003|CE86002_33
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length136
Homology
BLAST of jgi.p|Trimin1|86003 vs. uniprot
Match: A0A836C9Q5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9Q5_9STRA)

HSP 1 Score: 260 bits (665), Expect = 7.380e-88
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0
Query:    1 MQTCRSPAFAAVGEGNLPDEAYAFLKLIQLQKDWAAIGKTVREREDVAGDEWQNVQLYLRKMYQQGEELKGMAKGFAEPKRAQALALVEAVRAEARAADKPAGARDRDAFLAAQRSIEAKIGEFVDLFQDVPDEL 135
            MQTCRSPAFAAVGEGNLPDEAYAFLKLIQLQKDWAAIGKTVREREDVAGDEWQNVQLYLRKMYQQGEELKGMAKGFAEPKRAQALALVEAVRAEARAADKPAGARDRDAFLAAQRSIEAKIGEFVDLFQDVPDEL
Sbjct:    1 MQTCRSPAFAAVGEGNLPDEAYAFLKLIQLQKDWAAIGKTVREREDVAGDEWQNVQLYLRKMYQQGEELKGMAKGFAEPKRAQALALVEAVRAEARAADKPAGARDRDAFLAAQRSIEAKIGEFVDLFQDVPDEL 135          
BLAST of jgi.p|Trimin1|86003 vs. uniprot
Match: D8LPW5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPW5_ECTSI)

HSP 1 Score: 122 bits (305), Expect = 9.340e-32
Identity = 67/136 (49.26%), Postives = 93/136 (68.38%), Query Frame = 0
Query:    5 RSPAFAA----VGEGNLPDEAYAFLKLIQLQKDWAAIGKTV-REREDVAGDEWQNVQLYLRKMYQQGEELKGMAKGFAEPKRAQALALVEAVRAEARAADKPAGARDRDAFLAAQRSIEAKIGEFVDLFQDVPDEL 135
            + P FA+    VGEG LPD A  F  L+++QKDWAA+GK++ R+  DV  DEW+NV L+LRK+YQ G EL+ +A  F   K+  ALALV +++ E +AAD PA  +D  AF+ AQ S++ K  +F++LF DVP EL
Sbjct:  110 QGPEFASAEVGVGEGGLPDGARQFSNLVKVQKDWAALGKSIERQGADVTADEWKNVALFLRKVYQLGGELEYLAGTFPPDKKKSALALVRSIQKEVQAADVPAREKDAAAFMKAQASVQKKFEDFMELFNDVPSEL 245          
BLAST of jgi.p|Trimin1|86003 vs. uniprot
Match: A0A7S2SX15_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SX15_9STRA)

HSP 1 Score: 112 bits (279), Expect = 1.250e-28
Identity = 56/131 (42.75%), Postives = 88/131 (67.18%), Query Frame = 0
Query:    5 RSPAFAAVGEGNLPDEAYAFLKLIQLQKDWAAIGKTVREREDVAGDEWQNVQLYLRKMYQQGEELKGMAKGFAEPKRAQALALVEAVRAEARAADKPAGARDRDAFLAAQRSIEAKIGEFVDLFQDVPDEL 135
            R  A A VGEG LP+ A  F  +++++ +W  +GKTV++ E+++  +W+N+Q +LR+ YQ G ++K +AKG ++ K+A A   VEA++     ADKPA   DR AFL AQ+ +  +I +F++L  DVPDEL
Sbjct:   45 RVSAAAPVGEGGLPEGARQFDNVLRMRVEWDVMGKTVQDSEELSAAQWRNIQGFLRRAYQVGNDMKFVAKGVSKDKQAAAFKAVEAIQKSIEGADKPAQQNDRAAFLVAQKDVARQIADFLELISDVPDEL 175          
BLAST of jgi.p|Trimin1|86003 vs. uniprot
Match: A0A7S3NJV4_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NJV4_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 1.870e-15
Identity = 43/126 (34.13%), Postives = 70/126 (55.56%), Query Frame = 0
Query:   11 AVGEGNLPDEAYAFLKLIQLQKDWAAIGKTVREREDVA-GDEWQNVQLYLRKMYQQGEELKGMAKGFAEPKRAQALALVEAVRAEARAADKPAGARDRDAFLAAQRSIEAKIGEFVDLFQDVPDEL 135
            A  EG+LPD A+ F + I++Q +W   G  +++   V    EW+ V L+LRK+Y +GE++  + +   + K+  A  +    R+  + ADKP   +DR   + A     A +  F++L QDVPDEL
Sbjct:   49 ARNEGDLPDGAFQFDRFIKVQSEWNRFGSRLKDESQVIDAKEWEAVGLFLRKLYDEGEDMIFITQNLDKTKQNAAKEIATRFRSSVKGADKPVREQDRPVVIYAYNETSALMRSFLELLQDVPDEL 174          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|86003 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A836C9Q5_9STRA7.380e-88100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LPW5_ECTSI9.340e-3249.26Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2SX15_9STRA1.250e-2842.75Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3NJV4_9STRA1.870e-1534.13Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_7contigContig_7:765491..766993 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|86003mRNA_2560Tribonema minus UTEX_B_3156 mRNAContig_7 765384..767101 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|86003|CE86002_33 ID=Trimin1|86003|CE86002_33|Name=jgi.p|Trimin1|86003|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=136bp
MQTCRSPAFAAVGEGNLPDEAYAFLKLIQLQKDWAAIGKTVREREDVAGD
EWQNVQLYLRKMYQQGEELKGMAKGFAEPKRAQALALVEAVRAEARAADK
PAGARDRDAFLAAQRSIEAKIGEFVDLFQDVPDEL*
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