Trimin1|84130|CE84129_99 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|84130
Unique NameTrimin1|84130|CE84129_99
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length209
Homology
BLAST of jgi.p|Trimin1|84130 vs. uniprot
Match: A0A835YMV2_9STRA (Pre-mRNA-splicing factor SPF27 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMV2_9STRA)

HSP 1 Score: 406 bits (1044), Expect = 2.980e-143
Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 0
Query:    1 MASDTVFVDALPYIDKEYDDPRTQEVVHGLIEEEMARFRPKEYLRDRAIGHYNLAFKKGSILAAELARVSKGVPMAALDQTRYEVRAPDGAKAEDLGAWRDAVRNAKAQLGHQYNRQLNLELLGNYGANAWLHHNKALAGMESNMVATGKRLRDEADNINAQRQEAQTGLGQKLWHLDRQRVETADKNLQIALANAALQQQLKKYKET 208
            MASDTVFVDALPYIDKEYDDPRTQEVVHGLIEEEMARFRPKEYLRDRAIGHYNLAFKKGSILAAELARVSKGVPMAALDQTRYEVRAPDGAKAEDLGAWRDAVRNAKAQLGHQYNRQLNLELLGNYGANAWLHHNKALAGMESNMVATGKRLRDEADNINAQRQEAQTGLGQKLWHLDRQRVETADKNLQIALANAALQQQLKKYKET
Sbjct:    1 MASDTVFVDALPYIDKEYDDPRTQEVVHGLIEEEMARFRPKEYLRDRAIGHYNLAFKKGSILAAELARVSKGVPMAALDQTRYEVRAPDGAKAEDLGAWRDAVRNAKAQLGHQYNRQLNLELLGNYGANAWLHHNKALAGMESNMVATGKRLRDEADNINAQRQEAQTGLGQKLWHLDRQRVETADKNLQIALANAALQQQLKKYKET 208          
BLAST of jgi.p|Trimin1|84130 vs. uniprot
Match: A0A6H5L2U2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L2U2_9PHAE)

HSP 1 Score: 178 bits (452), Expect = 5.860e-53
Identity = 96/198 (48.48%), Postives = 132/198 (66.67%), Query Frame = 0
Query:    9 DALPYIDKEYDDPRTQEVVHGLIEEEMARFRPKEYLRDRAIGHYNLAFKKGSILAAELARVSKGVPMAALDQTRYEVRAPDGAKAEDLGAWRDAVRNAKAQLGHQYNRQLNLELLGNYGANAWLHHNKALAGMESNMVATGKRLRDEADNINAQRQEAQTGLGQKLWHLDRQRVETADKNLQIALANAALQQQLKKYK 206
            DAL YIDK+YDDPR +E+VH LIEEEMA F P +YL D+ +        K  +L +E ARV    P+  +D +RY+++ P GA AED  AW+ A+ NA+AQ  HQ+NR LNLELL NYGA+ WL HNKA  G E+ + +  KR R+EA+ +N +R+ +Q    + LW+L R+R E  DKN+QI LA   L+ ++K+ K
Sbjct:   21 DALSYIDKDYDDPRMKEIVHSLIEEEMAAFEPPDYLADKPLPTTRF---KSPLLKSEWARVRAEKPLDVIDTSRYDLQPPQGAAAEDEAAWKRALDNARAQTEHQHNRLLNLELLQNYGASMWLGHNKAEEGTEAAVASQAKRAREEAERVNLKRKTSQEAAEKTLWNLARKRSEGFDKNVQIQLACEGLRAEVKRLK 215          
BLAST of jgi.p|Trimin1|84130 vs. uniprot
Match: T1ISD0_STRMM (Pre-mRNA-splicing factor SPF27 n=1 Tax=Strigamia maritima TaxID=126957 RepID=T1ISD0_STRMM)

HSP 1 Score: 127 bits (318), Expect = 9.790e-33
Identity = 82/205 (40.00%), Postives = 110/205 (53.66%), Query Frame = 0
Query:    1 MASD-TVFVDALPYIDKEYDDPRTQEVVHGLIEEEMARFRPKEYLRDRAIGHYNLAFKKGSILAAELARVSKGVPMAALDQTRYEVRAPDGAKAEDLGAWRDAVRNAKAQLGHQYNRQLNLELLGNYGANAWLHHNKALAGMESNMVATGKRLRDEADNINAQRQEAQTGLGQKLWHLDRQRVETADKNLQIALANAALQQQLKK 204
            MASD TV VDALPYID+ YDDP  +E    ++EEE  R+RP +   D  +    L+  +  I+  E  R+   +PM  L   RYE+  P   K  DL AW + V N+ AQL HQ  R  NLEL+  YG  AW  +N  L  M +      + LR     +N  R+ AQT  G+KL HL+   V    KN +I  A A +++QLK+
Sbjct:    1 MASDSTVIVDALPYIDQGYDDPGVREAALAMVEEETRRYRPTKNYLDY-LPALQLSTFETDIMKTEFERLQARLPMEMLSMKRYELPQPPPGKMTDLLAWSECVDNSMAQLEHQATRIANLELMSEYGCEAWKVYNAVLVQMLNQAQKQLQNLRKHVQEVNWHRKNAQTLAGEKLRHLEASWVGLVSKNYEIEQACAEVEKQLKR 204          
BLAST of jgi.p|Trimin1|84130 vs. uniprot
Match: G4M164_SCHMA (Pre-mRNA-splicing factor SPF27 n=10 Tax=Schistosoma TaxID=6181 RepID=G4M164_SCHMA)

HSP 1 Score: 124 bits (310), Expect = 9.870e-32
Identity = 84/206 (40.78%), Postives = 113/206 (54.85%), Query Frame = 0
Query:    8 VDALPYIDKEYDDPRTQEVVHGLIEEEMARFRP-KEYLRD--RAIGHYNLAFKKGSILAAELARVSKGVPMAALDQTRYEVRAPDGAKAEDLGAWRDAVRNAKAQLGHQYNRQLNLELLGNYGANAWLHHNKALAGMESNMVATGKRL---RDEADNINAQRQEAQTGLGQKLWHLDRQRVETADKNLQIALANAALQQQLKKYKE 207
            VDALPY DK YDDP  +E    L+EEEM R+RP K YL       G   + F+   ++ AE  R+S  +PM  L   RYE+  P   K  D+ AW+DA+ NA+AQL HQ  R  NLEL+ +YG NAW  +N  L   ES++    K L   R +   IN +R++ QT  G+ L  L+   V    KN +I  A   L+Q+L  + E
Sbjct:    9 VDALPYFDKGYDDPGIREAAALLVEEEMKRYRPTKNYLEHLPSLSGPIQMKFET-EVMKAEFDRLSNRLPMEMLSMKRYELPPPPAGKMTDVKAWQDAMENAEAQLEHQATRIENLELMADYGCNAWKQYNNVL---ESSLQIYEKELLEIRRKIQEINWRRKQEQTAAGRHLKELEESWVGLVGKNYEIEQAILELEQELGVFSE 210          
BLAST of jgi.p|Trimin1|84130 vs. uniprot
Match: A0A1I8M2M0_MUSDO (Pre-mRNA-splicing factor SPF27 n=1 Tax=Musca domestica TaxID=7370 RepID=A0A1I8M2M0_MUSDO)

HSP 1 Score: 125 bits (313), Expect = 1.400e-31
Identity = 69/187 (36.90%), Postives = 109/187 (58.29%), Query Frame = 0
Query:    6 VFVDALPYIDKEYDDPRTQEVVHGLIEEEMARFRP-KEYLRDRAIGHYNLAFKKGSILAAELARVSKGVPMAALDQTRYEVRAPDGAKAEDLGAWRDAVRNAKAQLGHQYNRQLNLELLGNYGANAWLHHNKALAGMESNMVATGKRLRDEADNINAQRQEAQTGLGQKLWHLDRQRVETADKNLQI 191
            V VDALPYID+ YDDP  +E    ++EEE  R+RP K YL    + H + +  +  ++A E  R+   +PM  L   RYE+  P G++  ++ AW +++ N+KAQL HQ+ R +NLEL+ +YG  AW  + +    M++      + L+ E  ++N QR++AQT  G++L  L+   V    KN +I
Sbjct:    5 VIVDALPYIDQGYDDPGVRESALAMVEEECRRYRPTKNYLEH--MPHLSTSTFETKLMAQEFERIQNLIPMETLSMKRYELPPPSGSRLSEVSAWEESIDNSKAQLEHQWVRAMNLELMLDYGIEAWKAYLEVFVAMQAKAQGQLQELKKEIQDVNWQRKQAQTKAGERLRQLEASWVLLVSKNYEI 189          
BLAST of jgi.p|Trimin1|84130 vs. uniprot
Match: A0A6J8E4B2_MYTCO (Pre-mRNA-splicing factor SPF27 n=3 Tax=Mytilus TaxID=6548 RepID=A0A6J8E4B2_MYTCO)

HSP 1 Score: 123 bits (308), Expect = 1.770e-31
Identity = 79/208 (37.98%), Postives = 115/208 (55.29%), Query Frame = 0
Query:    1 MASDTVFVDALPYIDKEYDDPRTQEVVHGLIEEEMARFRP-KEYLRDRAIGHYNLAFKKGSILAAELARVSKGVPMAALDQTRYEVRAPDGAKAEDLGAWRDAVRNAKAQLGHQYNRQLNLELLGNYGANAWLHHNKALAGMESNMVATGKRLRDEADNINAQRQEAQTGLGQKLWHLDRQRVETADKNLQIALANAALQQQLKKYKE 207
            MA + V VDALPY D+ YD+P  +E    L++EE  R+RP K YL      +Y + F+   I+  E  R+   +PM  L+  RYE+  P   K  D+ AW +AV N++AQL HQ  R LNLELL  YG+NAW  +N  L+ M        + LR +   IN QR+  QT  G KL  L+   V    KN +I  A   +++++++ ++
Sbjct:    1 MAGEVV-VDALPYFDQGYDEPGVREAALALVDEETRRYRPTKNYLEYLPAPNY-IQFET-EIMKTEYERMQSRLPMEMLNMKRYELPPPPAGKMTDISAWNEAVENSQAQLEHQSLRILNLELLSEYGSNAWKSYNTVLSQMVEQAQKQLQELRKKIQEINWQRKNEQTQAGGKLKELEESWVGLVSKNYEIERACVEIEREIEEMEQ 205          
BLAST of jgi.p|Trimin1|84130 vs. uniprot
Match: A0A1I8PUC9_STOCA (Pre-mRNA-splicing factor SPF27 n=1 Tax=Stomoxys calcitrans TaxID=35570 RepID=A0A1I8PUC9_STOCA)

HSP 1 Score: 124 bits (311), Expect = 1.860e-31
Identity = 72/198 (36.36%), Postives = 113/198 (57.07%), Query Frame = 0
Query:    6 VFVDALPYIDKEYDDPRTQEVVHGLIEEEMARFRP-KEYLRDRAIGHYNLAFKKGSILAAELARVSKGVPMAALDQTRYEVRAPDGAKAEDLGAWRDAVRNAKAQLGHQYNRQLNLELLGNYGANAWLHHNKALAGMESNMVATGKRLRDEADNINAQRQEAQTGLGQKLWHLDRQRVETADKNLQIALANAALQQQL 202
            V VDALPYID+ YDDP  +E    ++EEE  R+RP K YL   A    + +  +  ++A E  R+   VPM  L   RYE+  P G++  ++ AW +++ N+KAQL HQ+ R +NLEL+ +YG  AW  + +    +++      + L+ E  ++N QR++AQT  G+KL  L+   V    KN +I      L++Q+
Sbjct:    5 VIVDALPYIDQGYDDPGVRESALAMVEEECRRYRPTKNYLEHLA--PLSTSTFETKLMAQEFERIQNRVPMETLSMKRYELPPPSGSRLSEVSAWEESIDNSKAQLEHQWVRAMNLELMLDYGIEAWKAYLEVFVALQAKAQVQLQELKKEIQDVNWQRKQAQTKAGEKLRSLEANWVLLVSKNYEIEQQCVELEKQI 200          
BLAST of jgi.p|Trimin1|84130 vs. uniprot
Match: A0A504YQH5_FASGI (Pre-mRNA-splicing factor SPF27 n=4 Tax=Fasciolidae TaxID=27843 RepID=A0A504YQH5_FASGI)

HSP 1 Score: 122 bits (307), Expect = 2.490e-31
Identity = 85/204 (41.67%), Postives = 110/204 (53.92%), Query Frame = 0
Query:    5 TVFVDALPYIDKEYDDPRTQEVVHGLIEEEMARFRP-KEYLRD--RAIGHYNLAFKKGSILAAELARVSKGVPMAALDQTRYEVRAPDGAKAEDLGAWRDAVRNAKAQLGHQYNRQLNLELLGNYGANAWLHHNKALAGMESNMVATGKRL---RDEADNINAQRQEAQTGLGQKLWHLDRQRVETADKNLQIALANAALQQQL 202
            T  VDALPY DK YDDP  +E    L+EEEM R+RP K YL       G +   F+   I+ AE  R+S  +PM  L   RYE+  P   K  D+ AW+DA+ NA+AQL HQ  R  NLEL+  YG NAW  +N  L   E ++    KRL   R     IN +R++ QT  G+KL  L+   V    KN +I  A   L++ L
Sbjct:    4 TAVVDALPYFDKGYDDPGIREAAALLVEEEMKRYRPTKNYLEHLPSLTGPFVPKFET-EIMKAEFDRLSNRLPMELLSMKRYELPPPPAGKMTDVKAWQDAMENAEAQLEHQATRIKNLELMAQYGCNAWKQYNSVL---EKDLQLHEKRLLEIRRRIQEINWRRKQEQTTAGKKLAELEETWVGLVGKNYEIEQAILELERNL 203          
BLAST of jgi.p|Trimin1|84130 vs. uniprot
Match: A0A812DY29_SEPPH (Pre-mRNA-splicing factor SPF27 n=1 Tax=Sepia pharaonis TaxID=158019 RepID=A0A812DY29_SEPPH)

HSP 1 Score: 122 bits (306), Expect = 3.170e-31
Identity = 78/198 (39.39%), Postives = 109/198 (55.05%), Query Frame = 0
Query:    6 VFVDALPYIDKEYDDPRTQEVVHGLIEEEMARFRP-KEYLRDRAIGHYNLAFKKGSILAAELARVSKGVPMAALDQTRYEVRAPDGAKAEDLGAWRDAVRNAKAQLGHQYNRQLNLELLGNYGANAWLHHNKALAGMESNMVATGKRLRDEADNINAQRQEAQTGLGQKLWHLDRQRVETADKNLQIALANAALQQQL 202
            V VDALPY DK Y++P  ++    L+EEE  R+RP K YL      +Y  AF+   I+  E+ R+   +PM  L   RYE+  P   K  D+ AW + V N++AQL HQ  R LNLEL+  YGANAW  +N  L  M        + ++ +  +IN QR+  QT  G KL  L+ Q V    KN +I  A A L++++
Sbjct:    5 VIVDALPYYDKGYEEPGIRDSALALVEEETRRYRPTKNYLDHLPAPNYT-AFET-EIMKTEIERLQSRLPMEMLSMKRYELPQPPAGKMTDIAAWSECVENSQAQLEHQALRILNLELMSEYGANAWKTYNTVLVQMVEQGQKQLQDIKKKIQDINWQRKNEQTEAGAKLKELENQWVGLVSKNYEIERACAELEKEI 200          
BLAST of jgi.p|Trimin1|84130 vs. uniprot
Match: UPI001C711394 (pre-mRNA-splicing factor SPF27-like n=1 Tax=Penaeus japonicus TaxID=27405 RepID=UPI001C711394)

HSP 1 Score: 122 bits (306), Expect = 3.430e-31
Identity = 77/203 (37.93%), Postives = 108/203 (53.20%), Query Frame = 0
Query:    3 SDTVFVDALPYIDKEYDDPRTQEVVHGLIEEEMARFRP-KEYLRDRAIGHYNLAFKKGSILAAELARVSKGVPMAALDQTRYEVRAPDGAKAEDLGAWRDAVRNAKAQLGHQYNRQLNLELLGNYGANAWLHHNKALAGMESNMVATGKRLRDEADNINAQRQEAQTGLGQKLWHLDRQRVETADKNLQIALANAALQQQLKK 204
            S  V VDALPYID  YD+P  +E    ++E+E  R+RP K YL    +   NLA  +  ++  E  RV+   PM  L   RYE+  P   K  D+ AW + V N+ AQL HQ  R +NLEL+  YGA AW  HN  L  M ++  A  + L+ E   +N  R+  QT  G++L HL+   V    +N +I  A   L+ ++ K
Sbjct:    2 SHDVIVDALPYIDTGYDEPGVREAAIAMVEDEKKRYRPTKNYLEH--LPPLNLAAFETEVMRGEFERVAARQPMDTLSMKRYELPPPPPGKMTDVAAWGECVDNSMAQLEHQSTRIMNLELMEEYGAEAWKEHNALLQRMLTHSQAQLQDLKKEIQELNWSRKNMQTKAGEELRHLESSWVSLVSRNYEIEQACVLLEAEIVK 202          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|84130 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YMV2_9STRA2.980e-143100.00Pre-mRNA-splicing factor SPF27 n=1 Tax=Tribonema m... [more]
A0A6H5L2U2_9PHAE5.860e-5348.48Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
T1ISD0_STRMM9.790e-3340.00Pre-mRNA-splicing factor SPF27 n=1 Tax=Strigamia m... [more]
G4M164_SCHMA9.870e-3240.78Pre-mRNA-splicing factor SPF27 n=10 Tax=Schistosom... [more]
A0A1I8M2M0_MUSDO1.400e-3136.90Pre-mRNA-splicing factor SPF27 n=1 Tax=Musca domes... [more]
A0A6J8E4B2_MYTCO1.770e-3137.98Pre-mRNA-splicing factor SPF27 n=3 Tax=Mytilus Tax... [more]
A0A1I8PUC9_STOCA1.860e-3136.36Pre-mRNA-splicing factor SPF27 n=1 Tax=Stomoxys ca... [more]
A0A504YQH5_FASGI2.490e-3141.67Pre-mRNA-splicing factor SPF27 n=4 Tax=Fasciolidae... [more]
A0A812DY29_SEPPH3.170e-3139.39Pre-mRNA-splicing factor SPF27 n=1 Tax=Sepia phara... [more]
UPI001C7113943.430e-3137.93pre-mRNA-splicing factor SPF27-like n=1 Tax=Penaeu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008409Pre-mRNA-splicing factor SPF27PFAMPF05700BCAS2coord: 7..207
e-value: 4.1E-55
score: 186.7
IPR008409Pre-mRNA-splicing factor SPF27PANTHERPTHR13296BCAS2 PROTEINcoord: 3..207
NoneNo IPR availablePANTHERPTHR13296:SF0PRE-MRNA-SPLICING FACTOR SPF27coord: 3..207

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_67contigContig_67:49199..50932 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|84130mRNA_10341Tribonema minus UTEX_B_3156 mRNAContig_67 49185..50946 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|84130|CE84129_99 ID=Trimin1|84130|CE84129_99|Name=jgi.p|Trimin1|84130|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=209bp
MASDTVFVDALPYIDKEYDDPRTQEVVHGLIEEEMARFRPKEYLRDRAIG
HYNLAFKKGSILAAELARVSKGVPMAALDQTRYEVRAPDGAKAEDLGAWR
DAVRNAKAQLGHQYNRQLNLELLGNYGANAWLHHNKALAGMESNMVATGK
RLRDEADNINAQRQEAQTGLGQKLWHLDRQRVETADKNLQIALANAALQQ
QLKKYKET*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008409SPF27