Trimin1|78669|CE78668_204 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|78669
Unique NameTrimin1|78669|CE78668_204
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length100
Homology
BLAST of jgi.p|Trimin1|78669 vs. uniprot
Match: A0A835YX54_9STRA (Putative cruciform DNA binding protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX54_9STRA)

HSP 1 Score: 113 bits (282), Expect = 1.310e-30
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0
Query:    1 MSSSGPSKMTGTKDEVLGSAKATIGSTIGNHQMEAEGHTQNKGGTAQKEAAGTKQKAEGA 60
            MSSSGPSKMTGTKDEVLGSAKATIGSTIGNHQMEAEGHTQNKGGTAQKEAAGTKQKAEGA
Sbjct:    1 MSSSGPSKMTGTKDEVLGSAKATIGSTIGNHQMEAEGHTQNKGGTAQKEAAGTKQKAEGA 60          
BLAST of jgi.p|Trimin1|78669 vs. uniprot
Match: A0A835YNR6_9STRA (Putative cruciform DNA binding protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNR6_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 6.450e-24
Identity = 50/56 (89.29%), Postives = 52/56 (92.86%), Query Frame = 0
Query:    1 MSSSGPSKMTGTKDEVLGSAKATIGSTIGNHQMEAEGHTQNKGGTAQKEAAGTKQK 56
            MSSSGPSKMTGTKDE+LGSAKATIGSTIGNHQMEAEGHTQNK GTA+K AA  KQK
Sbjct:    1 MSSSGPSKMTGTKDEILGSAKATIGSTIGNHQMEAEGHTQNKAGTAEKNAAAAKQK 56          
BLAST of jgi.p|Trimin1|78669 vs. uniprot
Match: A0A836CHS6_9STRA (Putative cruciform DNA binding protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHS6_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 1.080e-17
Identity = 43/58 (74.14%), Postives = 51/58 (87.93%), Query Frame = 0
Query:    1 MSSSGPSKMTGTKDEVLGSAKATIGSTIGNHQMEAEGHTQNKGGTAQKEAAGTKQKAE 58
            MSSSGPSK+TGTKDEVLGSAKATIGSTIGNH+MEAEG+ Q++ GT +  AA  KQ+A+
Sbjct:    1 MSSSGPSKVTGTKDEVLGSAKATIGSTIGNHKMEAEGNAQHQHGTLEAHAATAKQQAQ 58          
BLAST of jgi.p|Trimin1|78669 vs. uniprot
Match: A0A835Z1U0_9STRA (DNA binding protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1U0_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 1.240e-16
Identity = 39/59 (66.10%), Postives = 47/59 (79.66%), Query Frame = 0
Query:    1 MSSSGPSKMTGTKDEVLGSAKATIGSTIGNHQMEAEGHTQNKGGTAQKEAAGTKQKAEG 59
            MSSSGPSK+  TKD+V+G  KAT+G TIGNHQMEAEG+ Q++ GT +KE A  KQK EG
Sbjct:    1 MSSSGPSKINATKDQVIGQVKATVGKTIGNHQMEAEGNVQHQHGTTEKEVAAAKQKGEG 59          
BLAST of jgi.p|Trimin1|78669 vs. uniprot
Match: A0A835Z1D8_9STRA (Putative cruciform DNA binding protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1D8_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 4.060e-15
Identity = 39/59 (66.10%), Postives = 47/59 (79.66%), Query Frame = 0
Query:    1 MSSSGPSKMTGTKDEVLGSAKATIGSTIGNHQMEAEGHTQNKGGTAQKEAAGTKQKAEG 59
            MSSSGPSK++ TKD+V+G  KAT+G TIGNH MEAEG+ Q+  GTA+K AA  KQ AEG
Sbjct:    1 MSSSGPSKISATKDQVVGQVKATVGKTIGNHTMEAEGNMQHTHGTAEKHAATAKQTAEG 59          
BLAST of jgi.p|Trimin1|78669 vs. uniprot
Match: A0A835Z2J6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2J6_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 2.980e-11
Identity = 34/59 (57.63%), Postives = 43/59 (72.88%), Query Frame = 0
Query:    1 MSSSGPSKMTGTKDEVLGSAKATIGSTIGNHQMEAEGHTQNKGGTAQKEAAGTKQKAEG 59
            M SSGP K+  T+D+V+G  K T+G TIGNH+MEAEGH Q   GTA+K+AA  K  A+G
Sbjct:    1 MISSGPIKVLATRDQVVGQVKVTVGKTIGNHRMEAEGHKQQDHGTAEKQAAAAKHTADG 59          
BLAST of jgi.p|Trimin1|78669 vs. uniprot
Match: A0A137NRC1_CONC2 (CsbD domain-containing protein n=2 Tax=Conidiobolus coronatus (strain ATCC 28846 / CBS 209.66 / NRRL 28638) TaxID=796925 RepID=A0A137NRC1_CONC2)

HSP 1 Score: 53.5 bits (127), Expect = 3.890e-7
Identity = 28/57 (49.12%), Postives = 39/57 (68.42%), Query Frame = 0
Query:    4 SGPSKMTGTKDEVLGSAKATIGSTIGNHQMEAEGHTQNKGGTAQKEAAGTKQKAEGA 60
            S PSK     ++ +GS K T+GS +GNH+M+A+G+ QNK G A++ AA TK   EGA
Sbjct:    2 SDPSKTNAQYNQAMGSVKETVGSALGNHEMQAKGNVQNKQGHAEQSAAETKGWVEGA 58          
BLAST of jgi.p|Trimin1|78669 vs. uniprot
Match: A0A137NR95_CONC2 (Uncharacterized protein n=1 Tax=Conidiobolus coronatus (strain ATCC 28846 / CBS 209.66 / NRRL 28638) TaxID=796925 RepID=A0A137NR95_CONC2)

HSP 1 Score: 53.5 bits (127), Expect = 2.350e-6
Identity = 28/57 (49.12%), Postives = 39/57 (68.42%), Query Frame = 0
Query:    4 SGPSKMTGTKDEVLGSAKATIGSTIGNHQMEAEGHTQNKGGTAQKEAAGTKQKAEGA 60
            S PSK     ++ +GS K T+GS +GNH+M+A+G+ QNK G A++ AA TK   EGA
Sbjct:  114 SDPSKTNAQYNQAMGSVKETVGSALGNHEMQAKGNVQNKQGHAEQSAAETKGWVEGA 170          
BLAST of jgi.p|Trimin1|78669 vs. uniprot
Match: A0A137NRH7_CONC2 (CsbD domain-containing protein n=1 Tax=Conidiobolus coronatus (strain ATCC 28846 / CBS 209.66 / NRRL 28638) TaxID=796925 RepID=A0A137NRH7_CONC2)

HSP 1 Score: 50.4 bits (119), Expect = 6.130e-6
Identity = 27/55 (49.09%), Postives = 37/55 (67.27%), Query Frame = 0
Query:    6 PSKMTGTKDEVLGSAKATIGSTIGNHQMEAEGHTQNKGGTAQKEAAGTKQKAEGA 60
            PSK+    ++ +G+AK  +GS IGN  +EA+GH QNK G A++ AA TK   EGA
Sbjct:    4 PSKINAQYNQAMGTAKEVLGSAIGNTNLEAKGHIQNKEGKAEQTAAETKGWVEGA 58          
BLAST of jgi.p|Trimin1|78669 vs. uniprot
Match: A0A137NRE3_CONC2 (CsbD domain-containing protein n=1 Tax=Conidiobolus coronatus (strain ATCC 28846 / CBS 209.66 / NRRL 28638) TaxID=796925 RepID=A0A137NRE3_CONC2)

HSP 1 Score: 48.9 bits (115), Expect = 2.430e-5
Identity = 27/57 (47.37%), Postives = 37/57 (64.91%), Query Frame = 0
Query:    4 SGPSKMTGTKDEVLGSAKATIGSTIGNHQMEAEGHTQNKGGTAQKEAAGTKQKAEGA 60
            S PSK     ++ +GS K T+GS +GN  M+A+G+ QNK G A++ AA TK   EGA
Sbjct:    2 SDPSKTNAQYNQAMGSVKETVGSALGNTNMQAKGNVQNKEGHAEQSAAETKGWVEGA 58          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|78669 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A835YX54_9STRA1.310e-30100.00Putative cruciform DNA binding protein n=1 Tax=Tri... [more]
A0A835YNR6_9STRA6.450e-2489.29Putative cruciform DNA binding protein n=2 Tax=Tri... [more]
A0A836CHS6_9STRA1.080e-1774.14Putative cruciform DNA binding protein n=1 Tax=Tri... [more]
A0A835Z1U0_9STRA1.240e-1666.10DNA binding protein n=1 Tax=Tribonema minus TaxID=... [more]
A0A835Z1D8_9STRA4.060e-1566.10Putative cruciform DNA binding protein n=1 Tax=Tri... [more]
A0A835Z2J6_9STRA2.980e-1157.63Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A137NRC1_CONC23.890e-749.12CsbD domain-containing protein n=2 Tax=Conidiobolu... [more]
A0A137NR95_CONC22.350e-649.12Uncharacterized protein n=1 Tax=Conidiobolus coron... [more]
A0A137NRH7_CONC26.130e-649.09CsbD domain-containing protein n=1 Tax=Conidiobolu... [more]
A0A137NRE3_CONC22.430e-547.37CsbD domain-containing protein n=1 Tax=Conidiobolu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 23..48
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..99
IPR036629YjbJ superfamilySUPERFAMILY69047Hypothetical protein YjbJcoord: 8..61

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_59contigContig_59:619717..620677 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|78669mRNA_11147Tribonema minus UTEX_B_3156 mRNAContig_59 619665..620904 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|78669|CE78668_204 ID=Trimin1|78669|CE78668_204|Name=jgi.p|Trimin1|78669|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=100bp
MSSSGPSKMTGTKDEVLGSAKATIGSTIGNHQMEAEGHTQNKGGTAQKEA
AGTKQKAEGAGDGLFGHMQKATGQVLGNERMQGEGEMNKAKGTFKSDTA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036629YjbJ_sf