Trimin1|77658|CE77657_134 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|77658
Unique NameTrimin1|77658|CE77657_134
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length253
Homology
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BLAST of jgi.p|Trimin1|77658 vs. uniprot
Match: A0A835YSQ8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSQ8_9STRA)

HSP 1 Score: 441 bits (1134), Expect = 1.640e-155
Identity = 252/252 (100.00%), Postives = 252/252 (100.00%), Query Frame = 0 
Query:    1 MLAGTGRRFLRAATRSSPCYASTVPAVAPAAVHGSQWRATRCLATKKPEGFRLARTPQAAAAVKDVRRLAKAGNFAAMLQRVHSAAAAPRATTNELGDLYAVAATQLARAARSEDALALLETAKERGAARPALYAAXXXXXXXXXXXXXXLTLFQELRAAGLEAPTPTLCVAAEAAARAAEWSACAELLREMRNERGLGEAGGAYDNALQACADGGPKEHVYEFLDDLIIKSKREAGARVGKRPERSGGGAE 252
            MLAGTGRRFLRAATRSSPCYASTVPAVAPAAVHGSQWRATRCLATKKPEGFRLARTPQAAAAVKDVRRLAKAGNFAAMLQRVHSAAAAPRATTNELGDLYAVAATQLARAARSEDALALLETAKERGAARPALYAAXXXXXXXXXXXXXXLTLFQELRAAGLEAPTPTLCVAAEAAARAAEWSACAELLREMRNERGLGEAGGAYDNALQACADGGPKEHVYEFLDDLIIKSKREAGARVGKRPERSGGGAE
Sbjct:    1 MLAGTGRRFLRAATRSSPCYASTVPAVAPAAVHGSQWRATRCLATKKPEGFRLARTPQAAAAVKDVRRLAKAGNFAAMLQRVHSAAAAPRATTNELGDLYAVAATQLARAARSEDALALLETAKERGAARPALYAAXXXXXXXXXXXXXXLTLFQELRAAGLEAPTPTLCVAAEAAARAAEWSACAELLREMRNERGLGEAGGAYDNALQACADGGPKEHVYEFLDDLIIKSKREAGARVGKRPERSGGGAE 252
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|77658 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835YSQ8_9STRA1.640e-155100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 66..248
e-value: 1.1E-11
score: 46.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_57contigContig_57:473534..477812 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|77658mRNA_8612Tribonema minus UTEX_B_3156 mRNAContig_57 473226..477853 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|77658|CE77657_134 ID=Trimin1|77658|CE77657_134|Name=jgi.p|Trimin1|77658|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=253bp
MLAGTGRRFLRAATRSSPCYASTVPAVAPAAVHGSQWRATRCLATKKPEG
FRLARTPQAAAAVKDVRRLAKAGNFAAMLQRVHSAAAAPRATTNELGDLY
AVAATQLARAARSEDALALLETAKERGAARPALYAAAVSAANKAGHAERA
LTLFQELRAAGLEAPTPTLCVAAEAAARAAEWSACAELLREMRNERGLGE
AGGAYDNALQACADGGPKEHVYEFLDDLIIKSKREAGARVGKRPERSGGG
AE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf