Trimin1|76188|CE76187_92 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|76188
Unique NameTrimin1|76188|CE76187_92
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length292
Homology
BLAST of jgi.p|Trimin1|76188 vs. uniprot
Match: A0A835YXU6_9STRA (Ankyrin repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXU6_9STRA)

HSP 1 Score: 338 bits (867), Expect = 1.260e-113
Identity = 291/291 (100.00%), Postives = 291/291 (100.00%), Query Frame = 0
Query:    1 MDVNAPWGPNGRTALHAAAEAGSAESLEVLLRAGADSYAADNGGASPLILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDADYANTDLGGGEHALMLAAESGSVPAVRLLLAAGARLNRADKAGRTALWAAARNGHALVVQLLLSQPGIKHIRSYCRRSTTPLQEAQAAHHATCVALLSAHVQXXXXXXXXXXXXXXXXXXXXXXXXXVQQHTAPAXXXXXXXXXXXXXXXXXXXXXRSRRQPHTGLMPGSGDRVAGAKSLPCQQVLVH 291
            MDVNAPWGPNGRTALHAAAEAGSAESLEVLLRAGADSYAADNGGASPLILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDADYANTDLGGGEHALMLAAESGSVPAVRLLLAAGARLNRADKAGRTALWAAARNGHALVVQLLLSQPGIKHIRSYCRRSTTPLQEAQAAHHATCVALLSAHVQXXXXXXXXXXXXXXXXXXXXXXXXXVQQHTAPAXXXXXXXXXXXXXXXXXXXXXRSRRQPHTGLMPGSGDRVAGAKSLPCQQVLVH
Sbjct:    1 MDVNAPWGPNGRTALHAAAEAGSAESLEVLLRAGADSYAADNGGASPLILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDADYANTDLGGGEHALMLAAESGSVPAVRLLLAAGARLNRADKAGRTALWAAARNGHALVVQLLLSQPGIKHIRSYCRRSTTPLQEAQAAHHATCVALLSAHVQXXXXXXXXXXXXXXXXXXXXXXXXXVQQHTAPAXXXXXXXXXXXXXXXXXXXXXRSRRQPHTGLMPGSGDRVAGAKSLPCQQVLVH 291          
BLAST of jgi.p|Trimin1|76188 vs. uniprot
Match: A0A383VD65_TETOB (Uncharacterized protein n=2 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VD65_TETOB)

HSP 1 Score: 113 bits (282), Expect = 5.400e-25
Identity = 131/204 (64.22%), Postives = 143/204 (70.10%), Query Frame = 0
Query:    1 MDVNAPWGPNGRTALHAAAEAGSAESLEVLLRAGADSYAADNGGASPLILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDADYANTDLGGGEHALMLAAESGSVPAVRLLLAAGARLNRADKAGRTALWAAARNGHALVVQLLLSQPGIKHIRSYCRRSTTPLQEAQAAHHATCVALLSAHV 204
            +DVN P GP GRTALHAAAE G      VLL  GADSY  D    S L+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ADY N+DLG GE                     GAR+NRADK GRTALW A+R GH  VV+LLL QP IKHI+ +    T+PLQ AQAA HA   +LL+AH+
Sbjct:  117 VDVNKPCGPQGRTALHAAAEHGQCSCCSVLLELGADSYVYDERQVSALMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADYHNSDLGAGEXXXXXXXXXXXXXXXXXXXXXGARVNRADKEGRTALWVASRGGHMEVVRLLLRQPRIKHIQHFIS-GTSPLQTAQAAGHAGVASLLAAHL 319          
BLAST of jgi.p|Trimin1|76188 vs. uniprot
Match: A0A7J7QEN4_9CHLO (SF4 helicase domain-containing protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QEN4_9CHLO)

HSP 1 Score: 92.0 bits (227), Expect = 4.300e-17
Identity = 122/194 (62.89%), Postives = 133/194 (68.56%), Query Frame = 0
Query:    1 MDVNAPWGPNGRTALHAAAEAGSAESLEVLLRAGADSYAADNGGASPLILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDADYANTDLGGGEHALMLAAESGSVPAVRLLLAAGARLNRADKAGRTALWAAARNGHALVVQLLLSQPGIKHIRSYCRRSTTPLQEAQAAHHA 194
            +DVN    P+ RTALHAAAE G       LL  GADSY  D    S L+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ADY N+ LG GEH                     AR+NR DK GRTALW+A+R GH  VV+LLL QP IKHI+ +    T+PLQEAQAA HA
Sbjct:  951 LDVNQACVPHSRTALHAAAERGQHSCCSTLLELGADSYQHDARQVSALMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADYHNSALGLGEHXXXXXXXXXXXXXXXXXXXXXARVNRTDKEGRTALWSASRGGHPEVVRLLLRQPRIKHIQHFIS-GTSPLQEAQAAGHA 1143          
BLAST of jgi.p|Trimin1|76188 vs. uniprot
Match: A0A0D2JU21_9CHLO (Uncharacterized protein n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2JU21_9CHLO)

HSP 1 Score: 56.6 bits (135), Expect = 6.870e-6
Identity = 91/149 (61.07%), Postives = 104/149 (69.80%), Query Frame = 0
Query:   10 NGRTALHAAAEAGSAESLEVLLRAGADSYAADNGGASPLILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDA---DYANTDLGGGEHALMLAAESGSVPAVRLLLAAGARLNRADKAGRTALWAAAR 155
            +G TAL AA+ AG+A  +  LLR GAD+YA  +GGA+P+ L  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX             +  +  +  GEHAL LAA SG   AV +LL  GAR NR D  GR+ALW AAR
Sbjct:   68 SGLTALAAASAAGAAPVVVELLRRGADAYAYADGGATPMTLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLYLSEGCFVPIRDEVVSESIRTGEHALQLAARSGHAGAVDVLLRLGARANRVDACGRSALWEAAR 216          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|76188 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A835YXU6_9STRA1.260e-113100.00Ankyrin repeat-containing domain protein n=1 Tax=T... [more]
A0A383VD65_TETOB5.400e-2564.22Uncharacterized protein n=2 Tax=Tetradesmus obliqu... [more]
A0A7J7QEN4_9CHLO4.300e-1762.89SF4 helicase domain-containing protein n=1 Tax=Sce... [more]
A0A0D2JU21_9CHLO6.870e-661.07Uncharacterized protein n=1 Tax=Monoraphidium negl... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 128..142
score: 38.22
coord: 11..26
score: 44.89
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 112..141
e-value: 0.065
score: 22.4
coord: 43..72
e-value: 0.086
score: 22.0
coord: 145..174
e-value: 0.43
score: 19.6
coord: 76..105
e-value: 0.047
score: 22.8
coord: 10..39
e-value: 7.2E-4
score: 28.9
IPR002110Ankyrin repeatPFAMPF12796Ank_2coord: 117..202
e-value: 9.2E-12
score: 45.4
coord: 4..70
e-value: 1.3E-10
score: 41.7
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 10..42
score: 13.57085
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 43..75
score: 10.81972
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 112..144
score: 11.24708
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 76..108
score: 9.72461
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..240
e-value: 6.1E-51
score: 175.3
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 8..202
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 220..285
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 247..266
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 220..240
NoneNo IPR availablePANTHERPTHR24184SI:CH211-189E2.2coord: 74..231
NoneNo IPR availablePANTHERPTHR24184SI:CH211-189E2.2coord: 7..103
NoneNo IPR availablePANTHERPTHR24184:SF11SI:CH211-189E2.2coord: 7..103
NoneNo IPR availablePANTHERPTHR24184:SF11SI:CH211-189E2.2coord: 74..231
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 112..144
score: 9.887478
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 43..69
score: 10.046667
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 10..42
score: 12.195709

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_543contigContig_543:9646..10975 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|76188mRNA_19080Tribonema minus UTEX_B_3156 mRNAContig_543 9322..11011 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|76188|CE76187_92 ID=Trimin1|76188|CE76187_92|Name=jgi.p|Trimin1|76188|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=292bp
MDVNAPWGPNGRTALHAAAEAGSAESLEVLLRAGADSYAADNGGASPLIL
AAAGGHAAAVKVLLAAGADPFHVDHGGINPLLCAARVGSTSCMQLLLNEG
VDADYANTDLGGGEHALMLAAESGSVPAVRLLLAAGARLNRADKAGRTAL
WAAARNGHALVVQLLLSQPGIKHIRSYCRRSTTPLQEAQAAHHATCVALL
SAHVQQQQQQPLVQQQQQQQEQQLVQQQPPVQQHTAPAHSRRPQQRPPCA
KPQQNQQQSRSRRQPHTGLMPGSGDRVAGAKSLPCQQVLVH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf