Trimin1|72905|CE72904_191 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|72905
Unique NameTrimin1|72905|CE72904_191
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length165
Homology
BLAST of jgi.p|Trimin1|72905 vs. uniprot
Match: A0A835YTN8_9STRA (Glutaredoxin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTN8_9STRA)

HSP 1 Score: 300 bits (768), Expect = 1.270e-102
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 0
Query:    1 MKVTMMTGAVLLSIGAVLLVVSTNALSTSGMTAATVTGQGSSFINGASMPMADSAPPKMAMLAPADFVKQQIASQDIVVFSKSYCPYCAKTKALFQSLDAGATVIELDQRDDGGDIQAALAEITGQRTVPNVFVKGTHVGGNDATQKANSDGTLKSLMNGARKE 164
            MKVTMMTGAVLLSIGAVLLVVSTNALSTSGMTAATVTGQGSSFINGASMPMADSAPPKMAMLAPADFVKQQIASQDIVVFSKSYCPYCAKTKALFQSLDAGATVIELDQRDDGGDIQAALAEITGQRTVPNVFVKGTHVGGNDATQKANSDGTLKSLMNGARKE
Sbjct:    1 MKVTMMTGAVLLSIGAVLLVVSTNALSTSGMTAATVTGQGSSFINGASMPMADSAPPKMAMLAPADFVKQQIASQDIVVFSKSYCPYCAKTKALFQSLDAGATVIELDQRDDGGDIQAALAEITGQRTVPNVFVKGTHVGGNDATQKANSDGTLKSLMNGARKE 164          
BLAST of jgi.p|Trimin1|72905 vs. uniprot
Match: D8LSE4_ECTSI (Glutaredoxin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSE4_ECTSI)

HSP 1 Score: 127 bits (319), Expect = 1.820e-34
Identity = 63/95 (66.32%), Postives = 73/95 (76.84%), Query Frame = 0
Query:   66 DFVKQQIASQDIVVFSKSYCPYCAKTKALFQSLDAGATVIELDQRDDGGDIQAALAEITGQRTVPNVFVKGTHVGGNDATQKANSDGTLKSLMNG 160
            DFV+++I S ++VVFSKSYCP+C +TK LF  L   ATV ELDQ DDG  IQA L   TGQ TVPNVFVKGTHVGGNDA Q ANS G LK+L++G
Sbjct:   61 DFVEKEIDSNNVVVFSKSYCPFCTRTKNLFAGLGVDATVYELDQMDDGEAIQAILGAKTGQTTVPNVFVKGTHVGGNDAVQAANSSGALKTLLDG 155          
BLAST of jgi.p|Trimin1|72905 vs. uniprot
Match: A0A7S2R353_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R353_9STRA)

HSP 1 Score: 126 bits (317), Expect = 3.990e-34
Identity = 58/98 (59.18%), Postives = 76/98 (77.55%), Query Frame = 0
Query:   61 MLAPADFVKQQIASQDIVVFSKSYCPYCAKTKALFQSLDAGATVIELDQRDDGGDIQAALAEITGQRTVPNVFVKGTHVGGNDATQKANSDGTLKSLM 158
            M + +DFVKQ+IA+ D+VVFSKS+CP+C KTK+L   +D   T +EL+Q DDG DIQ AL +++GQRTVPNVFVKG H+GGND  QKA   G LK+++
Sbjct:   60 MSSASDFVKQEIANNDVVVFSKSFCPFCKKTKSLLDGMDIDYTALELNQMDDGADIQDALMDLSGQRTVPNVFVKGNHLGGNDDAQKAAKSGALKTML 157          
BLAST of jgi.p|Trimin1|72905 vs. uniprot
Match: A0A7S4JZY0_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JZY0_9STRA)

HSP 1 Score: 125 bits (314), Expect = 1.010e-33
Identity = 57/101 (56.44%), Postives = 78/101 (77.23%), Query Frame = 0
Query:   58 KMAMLAPADFVKQQIASQDIVVFSKSYCPYCAKTKALFQSLDAGATVIELDQRDDGGDIQAALAEITGQRTVPNVFVKGTHVGGNDATQKANSDGTLKSLM 158
            +M   +P +FVK +IAS D++VFSKSYCP+C KTK +F+ ++  A VIELD+ D+G  IQAAL E++GQRTVPNVF+KG H+GGND T+KA   G +K ++
Sbjct:   52 RMMSSSPEEFVKAEIASNDVMVFSKSYCPFCRKTKNIFKEMNVDAKVIELDEIDNGDQIQAALLEMSGQRTVPNVFIKGDHIGGNDDTKKAAKSGKIKEML 152          
BLAST of jgi.p|Trimin1|72905 vs. uniprot
Match: A0A7S3NI43_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NI43_9STRA)

HSP 1 Score: 122 bits (306), Expect = 9.090e-33
Identity = 58/101 (57.43%), Postives = 75/101 (74.26%), Query Frame = 0
Query:   58 KMAMLAPADFVKQQIASQDIVVFSKSYCPYCAKTKALFQSLDAGATVIELDQRDDGGDIQAALAEITGQRTVPNVFVKGTHVGGNDATQKANSDGTLKSLM 158
            + +M A    +   I + D+V+FSKSYCP+CAKTKALFQSL+  A + ELDQRDDG +IQ+ L E TGQ TVPNVF+KG H+GGND TQ+A++ G L  L+
Sbjct:   33 RRSMAASCLNIDDTIKANDVVIFSKSYCPFCAKTKALFQSLNVDADIYELDQRDDGAEIQSKLKEKTGQSTVPNVFIKGEHLGGNDDTQRAHASGKLAELL 133          
BLAST of jgi.p|Trimin1|72905 vs. uniprot
Match: A0A7S1CWF6_9CHLO (Hypothetical protein n=1 Tax=Picochlorum oklahomense TaxID=249345 RepID=A0A7S1CWF6_9CHLO)

HSP 1 Score: 120 bits (300), Expect = 9.280e-32
Identity = 55/91 (60.44%), Postives = 70/91 (76.92%), Query Frame = 0
Query:   68 VKQQIASQDIVVFSKSYCPYCAKTKALFQSLDAGATVIELDQRDDGGDIQAALAEITGQRTVPNVFVKGTHVGGNDATQKANSDGTLKSLM 158
            V   I ++D+VVFSKS+CP+CAKTK LF+ L   A + ELDQRDDG +IQA L E+TGQ TVPNVF+KG H+GGND TQ+AN+ G L  ++
Sbjct:   50 VDDAIKAKDVVVFSKSFCPFCAKTKTLFRELGVDADIYELDQRDDGSEIQATLKEMTGQSTVPNVFIKGEHLGGNDDTQQANASGELAKML 140          
BLAST of jgi.p|Trimin1|72905 vs. uniprot
Match: A0A0M0JED4_9EUKA (Glutaredoxin n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JED4_9EUKA)

HSP 1 Score: 120 bits (300), Expect = 9.550e-32
Identity = 60/101 (59.41%), Postives = 71/101 (70.30%), Query Frame = 0
Query:   58 KMAMLAPADFVKQQIASQDIVVFSKSYCPYCAKTKALFQSLDAGATVIELDQRDDGGDIQAALAEITGQRTVPNVFVKGTHVGGNDATQKANSDGTLKSLM 158
            +MA     D +K+ I S  +VV+SKSYCPYCAKTKALF S+D   T IELD  DDG  +Q AL  ITGQ+TVPNVFV G HVGGNDATQ A   G L+ ++
Sbjct:   41 QMAAAGLEDQIKKTIGSTKVVVYSKSYCPYCAKTKALFDSMDVKYTAIELDLMDDGPKVQEALLSITGQKTVPNVFVGGKHVGGNDATQAAAKSGELQKML 141          
BLAST of jgi.p|Trimin1|72905 vs. uniprot
Match: B8BTV0_THAPS (Glutaredoxin domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BTV0_THAPS)

HSP 1 Score: 119 bits (298), Expect = 2.480e-31
Identity = 56/99 (56.57%), Postives = 72/99 (72.73%), Query Frame = 0
Query:   60 AMLAPADFVKQQIASQDIVVFSKSYCPYCAKTKALFQSLDAGATVIELDQRDDGGDIQAALAEITGQRTVPNVFVKGTHVGGNDATQKANSDGTLKSLM 158
            A  +PA+F K +IA+ D+VVFSKSYCP+C  TK L   ++  A V ELD  D+G DIQ+AL +I+GQRTVPNVFVKG H+GGND TQ A   G L+ ++
Sbjct:   53 AYASPAEFAKAEIAANDVVVFSKSYCPFCTSTKQLLNKMNIDAKVYELDNMDNGADIQSALLDISGQRTVPNVFVKGKHLGGNDDTQAAARSGKLEEML 151          
BLAST of jgi.p|Trimin1|72905 vs. uniprot
Match: A0A7S2A2X9_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A2X9_TRICV)

HSP 1 Score: 119 bits (297), Expect = 3.520e-31
Identity = 55/98 (56.12%), Postives = 71/98 (72.45%), Query Frame = 0
Query:   61 MLAPADFVKQQIASQDIVVFSKSYCPYCAKTKALFQSLDAGATVIELDQRDDGGDIQAALAEITGQRTVPNVFVKGTHVGGNDATQKANSDGTLKSLM 158
            M  PA+F K +IAS D+VVFSKS+CP+C  TK LF  +     V+EL++ D+G D+QAAL E+TGQRTVPNVF+KG H+GGND TQ A   G +  L+
Sbjct:   53 MATPAEFAKAEIASSDVVVFSKSFCPFCTMTKNLFDGMGVDYKVLELNEIDNGADVQAALLEMTGQRTVPNVFIKGQHLGGNDDTQAAAKSGKIAELL 150          
BLAST of jgi.p|Trimin1|72905 vs. uniprot
Match: A0A6S8XR82_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8XR82_9STRA)

HSP 1 Score: 118 bits (295), Expect = 4.440e-31
Identity = 58/100 (58.00%), Postives = 71/100 (71.00%), Query Frame = 0
Query:   59 MAMLAPADFVKQQIASQDIVVFSKSYCPYCAKTKALFQSLDAGATVIELDQRDDGGDIQAALAEITGQRTVPNVFVKGTHVGGNDATQKANSDGTLKSLM 158
            + M A A+FV  +IA+ D+VVFSKS+CP+C KTKA    L       EL+Q D+G DIQAAL EI+GQRTVPNV+VKGTH+GGND TQ A   G L  L+
Sbjct:   36 LKMSAEAEFVNTEIAANDVVVFSKSFCPFCKKTKAALDGLKIEYKAYELNQMDNGADIQAALLEISGQRTVPNVYVKGTHIGGNDDTQAAIKSGKLSELL 135          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|72905 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YTN8_9STRA1.270e-102100.00Glutaredoxin n=1 Tax=Tribonema minus TaxID=303371 ... [more]
D8LSE4_ECTSI1.820e-3466.32Glutaredoxin n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A7S2R353_9STRA3.990e-3459.18Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S4JZY0_9STRA1.010e-3356.44Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S3NI43_9STRA9.090e-3357.43Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S1CWF6_9CHLO9.280e-3260.44Hypothetical protein n=1 Tax=Picochlorum oklahomen... [more]
A0A0M0JED4_9EUKA9.550e-3259.41Glutaredoxin n=1 Tax=Chrysochromulina tobinii TaxI... [more]
B8BTV0_THAPS2.480e-3156.57Glutaredoxin domain-containing protein n=1 Tax=Tha... [more]
A0A7S2A2X9_TRICV3.520e-3156.12Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A6S8XR82_9STRA4.440e-3158.00Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014025Glutaredoxin subgroupPRINTSPR00160GLUTAREDOXINcoord: 136..149
score: 30.95
coord: 122..135
score: 55.95
coord: 77..95
score: 48.03
IPR002109GlutaredoxinPFAMPF00462Glutaredoxincoord: 77..139
e-value: 5.4E-19
score: 68.2
IPR011899Glutaredoxin, eukaryotic/virialTIGRFAMTIGR02180TIGR02180coord: 77..157
e-value: 1.2E-29
score: 100.3
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 58..160
e-value: 1.1E-34
score: 120.5
NoneNo IPR availablePIRSRPIRSR005894-2PIRSR005894-2coord: 65..161
e-value: 8.3E-9
score: 33.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 143..164
NoneNo IPR availablePANTHERPTHR45694:SF18GLUTAREDOXIN 2coord: 66..157
NoneNo IPR availablePANTHERPTHR45694GLUTAREDOXIN 2coord: 66..157
NoneNo IPR availablePROSITEPS51354GLUTAREDOXIN_2coord: 65..164
score: 21.984358
NoneNo IPR availableCDDcd03419GRX_GRXh_1_2_likecoord: 77..157
e-value: 1.42215E-43
score: 137.286
IPR011767Glutaredoxin active sitePROSITEPS00195GLUTAREDOXIN_1coord: 79..94
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 66..161

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_5contigContig_5:1510521..1513486 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|72905mRNA_2436Tribonema minus UTEX_B_3156 mRNAContig_5 1510247..1513502 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|72905|CE72904_191 ID=Trimin1|72905|CE72904_191|Name=jgi.p|Trimin1|72905|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=165bp
MKVTMMTGAVLLSIGAVLLVVSTNALSTSGMTAATVTGQGSSFINGASMP
MADSAPPKMAMLAPADFVKQQIASQDIVVFSKSYCPYCAKTKALFQSLDA
GATVIELDQRDDGGDIQAALAEITGQRTVPNVFVKGTHVGGNDATQKANS
DGTLKSLMNGARKE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014025Glutaredoxin_subgr
IPR002109Glutaredoxin
IPR011899Glutaredoxin_euk/vir
IPR011767GLR_AS
IPR036249Thioredoxin-like_sf