Trimin1|72329|CE72328_6 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|72329
Unique Name	Trimin1\|72329\|CE72328_6
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	80

Homology

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BLAST of jgi.p|Trimin1|72329 vs. uniprot
Match: A0A835YSA6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSA6_9STRA)

HSP 1 Score: 146 bits (368), Expect = 2.510e-44
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0

Query:    1 MMAGLGLLTLGLMLAILAWRLIVAQAQTTPDKMPLSTFATPKPKPMPEPIAPVADPTPRDDDHETTDSSPNEGAATSAS 79
            MMAGLGLLTLGLMLAILAWRLIVAQAQTTPDKMPLSTFATPKPKPMPEPIAPVADPTPRDDDHETTDSSPNEGAATSAS
Sbjct:    1 MMAGLGLLTLGLMLAILAWRLIVAQAQTTPDKMPLSTFATPKPKPMPEPIAPVADPTPRDDDHETTDSSPNEGAATSAS 79

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BLAST of jgi.p|Trimin1|72329 vs. uniprot
Match: A0A835YQV8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQV8_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 2.870e-6
Identity = 33/55 (60.00%), Postives = 36/55 (65.45%), Query Frame = 0

Query:    1 MMAGLGLLTLGLMLAILAWRLIVAQAQTTPDKMPLSTFATPKPKPMPE-PIAPVA 54
            MM GLG+L+ GL+LAIL WR I AQAQ   DK P  TFATPK    P  P A VA
Sbjct:  517 MMLGLGMLSSGLVLAILTWRFIAAQAQNALDKQPRMTFATPKAATQPSAPAATVA 571

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|72329 vs. uniprot

BLAST of jgi.p|Trimin1|72329 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A835YSA6_9STRA	2.510e-44	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YQV8_9STRA	2.870e-6	60.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 40..54
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..79

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_5	contig	Contig_5:653890..655160 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|72329	mRNA_2313	Tribonema minus UTEX_B_3156	mRNA	Contig_5 653828..656610 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|72329|CE72328_6 ID=Trimin1|72329|CE72328_6|Name=jgi.p|Trimin1|72329|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=80bp
MMAGLGLLTLGLMLAILAWRLIVAQAQTTPDKMPLSTFATPKPKPMPEPI
APVADPTPRDDDHETTDSSPNEGAATSAS*