Trimin1|71688|CE71687_231 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|71688
Unique NameTrimin1|71688|CE71687_231
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length239
Homology
BLAST of jgi.p|Trimin1|71688 vs. uniprot
Match: A0A835YQZ7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQZ7_9STRA)

HSP 1 Score: 463 bits (1192), Expect = 8.120e-165
Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 0
Query:    1 MHACSCIALLCATASVSQAFLAPLPNVSTATCLRMSLESSKGGSKDVIGRDVLLRGALSAGVAAALALTTAVSPADAIGPVKIALTNPTYAEVTCPPNTQVPGQKAGAGLRPVCIKVKADADNPAKKDLENPAIFGRVFDEDGTSVVANNPDGGTDAGQFAMIEGVVPPGKSKIEFQFVAAIGPKEELSKKTLTFPSIKAISYPGAGRYGAITECEMNPLADECDLGDDFSAYRRVSK 238
            MHACSCIALLCATASVSQAFLAPLPNVSTATCLRMSLESSKGGSKDVIGRDVLLRGALSAGVAAALALTTAVSPADAIGPVKIALTNPTYAEVTCPPNTQVPGQKAGAGLRPVCIKVKADADNPAKKDLENPAIFGRVFDEDGTSVVANNPDGGTDAGQFAMIEGVVPPGKSKIEFQFVAAIGPKEELSKKTLTFPSIKAISYPGAGRYGAITECEMNPLADECDLGDDFSAYRRVSK
Sbjct:    1 MHACSCIALLCATASVSQAFLAPLPNVSTATCLRMSLESSKGGSKDVIGRDVLLRGALSAGVAAALALTTAVSPADAIGPVKIALTNPTYAEVTCPPNTQVPGQKAGAGLRPVCIKVKADADNPAKKDLENPAIFGRVFDEDGTSVVANNPDGGTDAGQFAMIEGVVPPGKSKIEFQFVAAIGPKEELSKKTLTFPSIKAISYPGAGRYGAITECEMNPLADECDLGDDFSAYRRVSK 238          
BLAST of jgi.p|Trimin1|71688 vs. uniprot
Match: A0A6H5JED9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JED9_9PHAE)

HSP 1 Score: 205 bits (522), Expect = 7.330e-63
Identity = 109/194 (56.19%), Postives = 136/194 (70.10%), Query Frame = 0
Query:   38 ESSKGGSKDVIGRDVLLRGALSAGVAAALALTTAVSP-----ADAIGPVKIALTNPTYAEVTCPPNTQVPGQKAGAGLRPVCIKVKADADNPAKKDLENPAIFGRVFDEDGTSVVANNPDGGTDAGQFAMIEGVVPPGKSKIEFQFVAAIGPKEELSKKTLTFPSIKAISYPGAGRYGAITECEMNPLADECDL 226
            E+   G +    R+V+    +   VAAA+ +TT  S      A A GP+K+ LT P YA V CPP TQVPG+KAGAGL+PVC+KV   A+NP+ K++ + A+FG VFDED TSVVANNPDG +DAGQFA+I+  +P G S++ FQFVAAI P E+ S K L F S+KAISY G  +YGAITECEMNPLA ECD 
Sbjct:   50 EAMSMGGEPQSRRNVIAGKGVGKSVAAAVGVTTLASASVPDEAAAFGPIKMELTEPEYASVVCPPKTQVPGEKAGAGLKPVCVKVTVTANNPSPKEVVDAAVFGFVFDEDSTSVVANNPDGASDAGQFAIID-KIPKGSSRVSFQFVAAIEPDEDFSLKKLKFKSLKAISYAGGQQYGAITECEMNPLAAECDF 242          
BLAST of jgi.p|Trimin1|71688 vs. uniprot
Match: A0A7S1DBN0_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DBN0_CYCTE)

HSP 1 Score: 152 bits (384), Expect = 5.630e-42
Identity = 96/227 (42.29%), Postives = 137/227 (60.35%), Query Frame = 0
Query:    9 LLCATA-SVSQAFLAPLPNVSTATCLRMSLESSKGGSKDVIGRDVLLRGALSAGVAAALALTTAVSPAD---AIGPVKIALTNPTYAEVTCPPNTQVPGQKAGAGLRPVCIKVKADADNPAKKDLENPAIFGRVFDED-GTSVVANNPDGGTDAGQFAMIEGVVPPGKSKIEFQFVAAIGPKEELSKKT-----LTFPSIKAISYPGAGRYGAITECEMNPLADECD 225
            LLCAT  S  QAF +PL +   +T  +  L++S              R  L+ GVAA +   T + P+D   A+GP+K+AL NP Y+   CPPN  +PG+KA  G+R +C+ V+AD +    KDL+   ++G V D D G SV+ANNPD  TDAGQFAM+E V    K K+ F FVAA+  ++++S+       LTF S++ IS+PG  +YGAI+ CEM+  + EC+
Sbjct:   11 LLCATTISRVQAF-SPLVSYRKSTGTKTQLQASSXXXXX--------RTFLTTGVAAVVGAATTLLPSDPAQAVGPIKVALVNPVYSAQPCPPNRPIPGEKAMKGMRGLCVTVQADLETETPKDLDKVGVYGFVTDSDTGESVLANNPDLSTDAGQFAMVESVTTSDK-KVTFDFVAAVPREKDISQYENGIGPLTFGSLRVISFPGGQQYGAISPCEMDEFSMECE 227          
BLAST of jgi.p|Trimin1|71688 vs. uniprot
Match: A0A6V2NP08_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2NP08_9STRA)

HSP 1 Score: 149 bits (376), Expect = 9.600e-41
Identity = 91/226 (40.27%), Postives = 129/226 (57.08%), Query Frame = 0
Query:   20 FLAPLPNVSTA-----TCLRMSLESSKGGSKDVIGRDVLLRGALSAGVAAALALTTAVS-----PADAIGPVKIALTNPTYAEVTCPPNTQVPGQKAGAGLRPVCIKVKADADNPAKKDLENPAIFGRVFDE-DGTSVVANNPDGGTDAGQFAMIEGVVPPGKSKIEFQFVAAIGPKEELSK-----KTLTFPSIKAISYPGAGRYGAITECEMNPLADECDLGDD 229
            FLA LP  + A     + +RMSL  ++  +     R      A +  +    A   A S     PA+A+GPVK+ LTNPTY    CPP+  +PG+KA  G++ +C+ VKAD      KDLE   ++G V D   G SV+ANNPD  TDAGQFAMIE V    + K+EF+ +AAI  ++++++       L F  ++ ISYPG  +YGAI+ CEMN  + EC+  +D
Sbjct:   10 FLAALPTAAIAYSPGASFVRMSLSGNECAASSTSSRRTFFSKAAAVTLGTVTASNVATSYGAGGPAEAVGPVKVTLTNPTYFAEPCPPSKPIPGEKAMKGMKGLCVTVKADLAESPPKDLEKVGVYGFVTDGVTGDSVLANNPDLSTDAGQFAMIESVTTNDR-KVEFELIAAIPREKDVTQFENGIGPLNFDGLRIISYPGGQQYGAISPCEMNEFSSECEAWED 234          
BLAST of jgi.p|Trimin1|71688 vs. uniprot
Match: A0A7S4D819_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D819_HETAK)

HSP 1 Score: 143 bits (361), Expect = 1.580e-38
Identity = 101/222 (45.50%), Postives = 128/222 (57.66%), Query Frame = 0
Query:   14 ASVSQAFLAPLPNVSTATCLRMSLESSKGGSKDVIGRDVLLRGALSAGVAAALA--LTTAVSP-ADAIGPVKIALTNPTYAEVTCPPNTQVPGQ---KAGAGLRPVCIKVKADADNPAKKDLENPAIFGRVFDEDGTSVVANNPDGGTDAGQFAMIEGVVPPGKSKIEFQFVAAIGPKEELSKKTLTFPSIKAISYPGAGRYGAITECEMNPLADECDLGDD 229
            A+VS  F+  LP   ++  L MS +   GG    + R  L   A  +G A  LA   TT  +P A AIGPVK+ LTN  Y  V C       G    K+ AGL   C++V AD  NP KK + + ++FG VFD  G+SVV NNPD  +DAGQFA+I  +VP GKS I+F+ VAA+ P E      L F SIKAISYPG  RY AI++C+ NP  D CD  +D
Sbjct:   42 AAVSTGFV--LPASKSSCVLHMSAD---GG----LSRRELFSAAAKSGAAFGLASAFTTGAAPMASAIGPVKMPLTNIAYQAVDCKGKELSGGSFTSKSTAGLVSYCVEVTADVFNPEKKTIIDASVFGFVFDNTGSSVVLNNPDARSDAGQFAIIPKIVP-GKSNIKFEMVAAV-PSERGDVGELRFESIKAISYPGGDRYKAISDCDFNPSGDGCDEEED 252          
BLAST of jgi.p|Trimin1|71688 vs. uniprot
Match: A0A7S2KRJ0_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KRJ0_9STRA)

HSP 1 Score: 142 bits (359), Expect = 1.700e-38
Identity = 87/214 (40.65%), Postives = 126/214 (58.88%), Query Frame = 0
Query:   29 TATCLRMSLESSKGGSKDVIGRDVLLRGALSAGVAAALALTTAVSPADAIGPVKIALTNPTYAEVTCPPNTQVPGQKAGAGLRPVCIKVKADADNPAKKDLENPAIFGRVFDE-DGTSVVANNPDGGTDAGQFAMIEGVVPPGKSKIEFQFVAAIGPKEELSKKT-----LTFPSIKAISYPGAGRYGAITECEMNPLADECDLGD-DFSAYRR 235
            T+TCL M+L+          G ++    AL+ G  +    T  + PA AIGPVK+ L    Y    CPP+  +PG+KA  G+R +C+ V+A     A KDLE   ++G V D     SV+ANNPD  TDAGQF+MIE V    K  +EF+FVAA+  ++++SK+      L+F S++ IS+PG  +YGAI  CEMN  +DEC++ + +   Y+R
Sbjct:   14 TSTCLHMNLDRRS------FGANIASAAALALGTTS----TLNIQPASAIGPVKVPLEVLDYKAEICPPSKPIPGEKAMKGMRGLCVTVQAKLTENAPKDLEKVGVYGFVTDAVTSDSVLANNPDKSTDAGQFSMIESVTTKDKL-VEFEFVAAVPMEKDVSKEENGIGPLSFESLRIISFPGGQQYGAINPCEMNEFSDECEVWEAENGEYKR 216          
BLAST of jgi.p|Trimin1|71688 vs. uniprot
Match: A0A1E7EZ87_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EZ87_9STRA)

HSP 1 Score: 143 bits (361), Expect = 2.520e-38
Identity = 73/157 (46.50%), Postives = 103/157 (65.61%), Query Frame = 0
Query:   76 DAIGPVKIALTNPTYAEVTCPPNTQVPGQKAGAGLRPVCIKVKADADNPAKKDLENPAIFGRVFDED-GTSVVANNPDGGTDAGQFAMIEGVVPPGKSKIEFQFVAAIGPKEELSK-----KTLTFPSIKAISYPGAGRYGAITECEMNPLADECDL 226
            +AIGPVKI L NPTY  + CP +  +PG+KA  G+R +C+ V  D ++  K  LE   ++G V D   G SV+ANNPDGGTD+GQFAMIE +    K KI+F+F+AA+  +++L         + F S++ +S+PG  +YGAI  CEMN  +DECD+
Sbjct:   92 NAIGPVKINLLNPTYTAIPCPKDRPIPGEKAMKGMRGLCVTVAVDLEDLPKDPLEKVGVYGYVTDTGTGESVLANNPDGGTDSGQFAMIESITTTDK-KIQFEFIAAVPSEQDLRGYEAGIAPINFKSLRVVSFPGGQQYGAINPCEMNEFSDECDV 247          
BLAST of jgi.p|Trimin1|71688 vs. uniprot
Match: A0A1Z5J9N6_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J9N6_FISSO)

HSP 1 Score: 142 bits (358), Expect = 3.590e-38
Identity = 93/220 (42.27%), Postives = 135/220 (61.36%), Query Frame = 0
Query:   15 SVSQAFLAPLPNVS---TATCLRMSLESSKGGSKDVIGRDVLLRGALSAGVAAALALTTAVSPADAIGPVKIALTNPTYAEVTCPPNTQVPGQKAGAGLRPVCIKVKADADNPAKKDLENPAIFGRVFDED-GTSVVANNPDGGTDAGQFAMIEGVVPPGKSKIEFQFVAAIGPKEELSKKT-----LTFPSIKAISYPGAGRYGAITECEMNPLADECD 225
            ++SQAF   LP +S   T   LRM+ + S     +V  R+ LL+        AA AL T  S A AIGPV+++LT  +Y   TCPPN  +PGQKA  G+R +C+ V+A  ++P  K+LE   ++G + D D G SV+ANNPD  TDAGQFA++E V    K+ IEF+F+AA+  +++L++       L F S++ +S+PG  +YG I  CEMN  + EC+
Sbjct:   12 AISQAFQPVLPEISSSRTTAPLRMTADDS---FSNVNRRNFLLQ------TIAASALLTPQS-AHAIGPVRVSLTPTSYIARTCPPNKPIPGQKAMQGMRGLCVTVQATLNDPVPKELEKVGVYGFITDGDTGDSVLANNPDLSTDAGQFAIVEKVKTTDKT-IEFEFIAAVPREKDLTQYDNGIGPLHFESLRLVSFPGGQQYGEINPCEMNEFSIECE 220          
BLAST of jgi.p|Trimin1|71688 vs. uniprot
Match: K0THP2_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0THP2_THAOC)

HSP 1 Score: 142 bits (359), Expect = 4.760e-38
Identity = 76/168 (45.24%), Postives = 112/168 (66.67%), Query Frame = 0
Query:   75 ADAIGPVKIALTNPTYAEVTCPPNTQVPGQKAGAGLRPVCIKVKADADNPAKKDLENPAIFGRVFDEDGT-SVVANNPDGGTDAGQFAMIEGVVPPGKSKIEFQFVAAIGPKEELSKKT-----LTFPSIKAISYPGAGRYGAITECEMNPLADEC-DLGDDFSAYRR 235
            A+AIGP+KI + NP+Y    CP +  +PG+KA  G+R +C++VKA+    + KDLE   I+G V D + T SV+ANNPD GTDAGQFA+I  +    K KIEF+F+AA+  ++++SK       L+F S++ +S+PG  +YGAI+ CEMN  + EC D  ++   Y+R
Sbjct:   89 AEAIGPIKIDIINPSYVAAPCPKDKPIPGEKAMKGMRGLCVQVKAELAENSPKDLEKVGIYGYVDDAESTESVLANNPDSGTDAGQFAIIPEIKTTDK-KIEFEFIAAVPMEKDISKYEDGIGPLSFKSLRIVSFPGGQQYGAISPCEMNEFSSECEDWEEENGPYQR 255          
BLAST of jgi.p|Trimin1|71688 vs. uniprot
Match: B7FXB4_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FXB4_PHATC)

HSP 1 Score: 137 bits (346), Expect = 2.330e-36
Identity = 83/194 (42.78%), Postives = 118/194 (60.82%), Query Frame = 0
Query:   50 RDVLLRGALSAGVAAALALTTAVSPADAIGPVKIALTNPTYAEVTCPPNTQVPGQKAGAGLRPVCIKVKADADNPAKKDLENPAIFGRVFDED-GTSVVANNPDGGTDAGQFAMIEGVVPPGKSKIEFQFVAAIGPKEELSKKT-----LTFPSIKAISYPGAGRYGAITECEMNPLADECDLGD-DFSAYRRV 236
            R  L+  A +A   +   L TA + A A+GPVKI L   +Y    CPP+  +PGQ A  G+R +C+ V+A   + A KDLE   ++G + D   G SV+ANNPD  TDAGQFAM+E V P  K KI F+FVAA+   ++LS+       L F S++ ISYPG  +YGAI  CEMN  ++EC++ + +  +Y++ 
Sbjct:   43 RSFLVTNAAAAAAVSGWGLWTAPA-AQAVGPVKITLEALSYQARPCPPDKPIPGQMAMKGMRGLCVTVEAKLKDAAPKDLEKVGVYGFITDASTGNSVLANNPDLSTDAGQFAMVESVTPKDK-KILFEFVAAVPSDKDLSQYEDGIGPLDFESLRIISYPGGQQYGAINPCEMNEFSEECEVWEQENGSYQKA 234          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|71688 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
A0A835YQZ7_9STRA8.120e-165100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5JED9_9PHAE7.330e-6356.19Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S1DBN0_CYCTE5.630e-4242.29Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A6V2NP08_9STRA9.600e-4140.27Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S4D819_HETAK1.580e-3845.50Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2KRJ0_9STRA1.700e-3840.65Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A1E7EZ87_9STRA2.520e-3846.50Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
A0A1Z5J9N6_FISSO3.590e-3842.27Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
K0THP2_THAOC4.760e-3845.24Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
B7FXB4_PHATC2.330e-3642.78Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_49contigContig_49:548742..552753 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|71688mRNA_10474Tribonema minus UTEX_B_3156 mRNAContig_49 548671..553069 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|71688|CE71687_231 ID=Trimin1|71688|CE71687_231|Name=jgi.p|Trimin1|71688|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=239bp
MHACSCIALLCATASVSQAFLAPLPNVSTATCLRMSLESSKGGSKDVIGR
DVLLRGALSAGVAAALALTTAVSPADAIGPVKIALTNPTYAEVTCPPNTQ
VPGQKAGAGLRPVCIKVKADADNPAKKDLENPAIFGRVFDEDGTSVVANN
PDGGTDAGQFAMIEGVVPPGKSKIEFQFVAAIGPKEELSKKTLTFPSIKA
ISYPGAGRYGAITECEMNPLADECDLGDDFSAYRRVSK*
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