Trimin1|71461|CE71460_43 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|71461
Unique NameTrimin1|71461|CE71460_43
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length205
Homology
BLAST of jgi.p|Trimin1|71461 vs. uniprot
Match: A0A835YQX8_9STRA (PCI domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQX8_9STRA)

HSP 1 Score: 397 bits (1019), Expect = 1.470e-139
Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 0
Query:    1 MAEDGGAAGLEQYCLLAKTAKGRACVALIQKVMADKKIFVFGELLAMPNVQGLRGTEHEPYLRLLELFAYGVYGDHKAAGGALPQLSDAMTEKLRMLTVVALANTSRVVPYGKLQEALGVSSVRVVEDVVLDAMYAGLLQCRLDQRAGTLRVQHVTPRDVRPEEIDSMIATLDMWAGATDRALRGLRKGVNSAKAAWKAEEVQQR 205
            MAEDGGAAGLEQYCLLAKTAKGRACVALIQKVMADKKIFVFGELLAMPNVQGLRGTEHEPYLRLLELFAYGVYGDHKAAGGALPQLSDAMTEKLRMLTVVALANTSRVVPYGKLQEALGVSSVRVVEDVVLDAMYAGLLQCRLDQRAGTLRVQHVTPRDVRPEEIDSMIATLDMWAGATDRALRGLRKGVNSAKAAWKAEEVQQR
Sbjct:    1 MAEDGGAAGLEQYCLLAKTAKGRACVALIQKVMADKKIFVFGELLAMPNVQGLRGTEHEPYLRLLELFAYGVYGDHKAAGGALPQLSDAMTEKLRMLTVVALANTSRVVPYGKLQEALGVSSVRVVEDVVLDAMYAGLLQCRLDQRAGTLRVQHVTPRDVRPEEIDSMIATLDMWAGATDRALRGLRKGVNSAKAAWKAEEVQQR 205          
BLAST of jgi.p|Trimin1|71461 vs. uniprot
Match: F0YEG3_AURAN (PCI domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YEG3_AURAN)

HSP 1 Score: 187 bits (476), Expect = 5.690e-57
Identity = 98/195 (50.26%), Postives = 134/195 (68.72%), Query Frame = 0
Query:    1 MAEDGGAAGLEQYCLLAKTAKGRACVALIQKVMADKKIFVFGELLAMPNVQGLRGTEHEPYLRLLELFAYGVYGDHKAAGGALPQLSDAMTEKLRMLTVVALANTSRVVPYGKLQEALGVSSVRVVEDVVLDAMYAGLLQCRLDQRAGTLRVQHVTPRDVRPEEIDSMIATLDMWAGATDRALRGLRKGVNSAKA 195
            MAEDG  A LEQ+CLLAK+AKGRA V +IQ+ ++ K+I+VFGELLAMP+VQ LRGTEH P+L LLE+FA+G YGD++A G A+P L+ A   KLR L++V+LA  S VV Y  +QE L V +VR +ED +++ +YAGLL  ++DQ +   RV     RDV+ + +  + A L+ WA    +    L +   SAKA
Sbjct:    1 MAEDGSQA-LEQFCLLAKSAKGRAVVGIIQQTLSSKRIYVFGELLAMPSVQALRGTEHAPHLDLLEIFAFGTYGDYRAKGDAMPPLTPAQLTKLRQLSLVSLARESAVVAYATMQEELAVDNVRDLEDAIIETIYAGLLSGKMDQMSAEFRVAKAAGRDVKLDAVGDLAAKLEAWAATAGQLSAELEENKASAKA 194          
BLAST of jgi.p|Trimin1|71461 vs. uniprot
Match: A0A7S2RP08_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RP08_9STRA)

HSP 1 Score: 189 bits (480), Expect = 1.490e-56
Identity = 94/190 (49.47%), Postives = 135/190 (71.05%), Query Frame = 0
Query:    1 MAEDGGAAGLEQYCLLAKTAKGRACVALIQKVMADKKIFVFGELLAMPNVQGLRGTEHEPYLRLLELFAYGVYGDHKAAGGALPQLSDAMTEKLRMLTVVALANTSRVVPYGKLQEALGVSSVRVVEDVVLDAMYAGLLQCRLDQRAGTLRVQHVTPRDVRPEEIDSMIATLDMWAGATDRALRGLRKGV 190
            MA+  G+A  E++CLLAK+ +GRA VALI++ ++ KK+FV GELLAM N+Q LRGTE E +LRLLELFAYG Y +++AA   LP+L+  M EKLR L++V+LA+T + V Y +LQ+ L +++VR +ED+++D +YAGL+  +LDQ  G L V+    RDVRPEE+  MI  L  W    ++ +  L K +
Sbjct:   18 MADGSGSATFERFCLLAKSQRGRAVVALIEQALSSKKVFVVGELLAMDNIQALRGTEFEAHLRLLELFAYGTYSEYQAAKDQLPELNSNMKEKLRALSIVSLAHTKKQVTYTELQQELAITNVRELEDLIIDTIYAGLVDGKLDQANGMLNVRSAVARDVRPEEVGEMIQKLTQWGSDMEQLIAALDKNM 207          
BLAST of jgi.p|Trimin1|71461 vs. uniprot
Match: A0A7S2CC19_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CC19_9STRA)

HSP 1 Score: 187 bits (474), Expect = 7.290e-56
Identity = 95/184 (51.63%), Postives = 129/184 (70.11%), Query Frame = 0
Query:    1 MAEDGGAAGLEQYCLLAKTAKGRACVALIQKVMADKKIFVFGELLAMPNVQGLRGTEHEPYLRLLELFAYGVYGDHKAAGGALPQLSDAMTEKLRMLTVVALANTSRVVPYGKLQEALGVSSVRVVEDVVLDAMYAGLLQCRLDQRAGTLRVQHVTPRDVRPEEIDSMIATLDMWAGATDRALR 184
            MAE G  A LEQ+CLLAKTAK RA V LI++ + ++KIFVFGELL M N+Q LR TEH  YLRLLELFAYG Y  + A     P ++ A TEKLR L++V+LA+T + VPY  LQ  L +++VR +ED+++D +Y GL+  ++DQ  G L+V+   PRDV+PE++D+MI+ L  W    D  L+
Sbjct:    2 MAEGG--AALEQFCLLAKTAKSRAAVELIKQALTNRKIFVFGELLFMDNMQALRDTEHAEYLRLLELFAYGTYSQYLAQRDQYPDMNAAQTEKLRQLSIVSLAHTQKKVPYEVLQAELAINNVRELEDLIIDTIYTGLVTGKMDQTTGVLKVKSAVPRDVKPEDVDAMISKLTDWRDKCDAILK 183          
BLAST of jgi.p|Trimin1|71461 vs. uniprot
Match: A0A7S2UVG8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVG8_9STRA)

HSP 1 Score: 180 bits (456), Expect = 6.860e-54
Identity = 92/184 (50.00%), Postives = 130/184 (70.65%), Query Frame = 0
Query:    3 EDGGAAGLEQYCLLAKTAKGRACVALIQKVMADKKIFVFGELLAMPNVQGLRGTEHEPYLRLLELFAYGVYGDHKAAGGALPQLSDAMTEKLRMLTVVALANTSRVVPYGKLQEALGVSSVRVVEDVVLDAMYAGLLQCRLDQRAGTLRVQHVTPRDVRPEEIDSMIATLDMWAGATDRALRGL 186
            + GGAA LE++ +LAK AKGRACVALIQ+V+ + ++FVFGELLA PNVQ L GTEHE +LRLLELFAYG Y D+     +LP+L+ A   KLR L++V+LA+ S+V+ Y +L + L + +VR +ED+V++ +Y GL+  +LDQ  G L+V  V  RDVRP E+  ++  L  W+  T   ++ L
Sbjct:    4 DGGGAADLERFVILAKNAKGRACVALIQQVLNNNRVFVFGELLASPNVQALAGTEHELHLRLLELFAYGTYSDYHENRSSLPELTPAQRTKLRQLSLVSLASASKVLRYEELMKELQLENVRELEDLVIETIYVGLVLGKLDQLGGVLKVSAVGARDVRPSEVPHLLHRLQHWSQVTQALVQEL 187          
BLAST of jgi.p|Trimin1|71461 vs. uniprot
Match: A0A4D9D7R0_9STRA (PCI domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D7R0_9STRA)

HSP 1 Score: 181 bits (458), Expect = 2.740e-53
Identity = 93/189 (49.21%), Postives = 125/189 (66.14%), Query Frame = 0
Query:    1 MAEDGGAAGLEQYCLLAKTAKGRACVALIQKVMADKKIFVFGELLAMPNVQGLRGTEHEPYLRLLELFAYGVYGDHKAAGGALPQLSDAMTEKLRMLTVVALANTSRVVPYGKLQEALGVSS-VRVVEDVVLDAMYAGLLQCRLDQRAGTLRVQHVTPRDVRPEEIDSMIATLDMWAGATDRALRGLRK 188
            M  D GA  LEQ+ +LAK+AKG ACVALIQ+V++ +KI VFGELLAMPN++ LRG+EHEPYLRLLE+FAYG Y D++   G LP L+     KL+ LT+V LA     +PY  L   L +   VR +ED++++++Y G+L  RLDQR G  R++    RDVR E+ID M+  L  W    +  L  L +
Sbjct:    1 MNSDAGAGALEQFTILAKSAKGNACVALIQQVLSTRKIVVFGELLAMPNLEALRGSEHEPYLRLLEIFAYGTYADYQRQRGTLPPLTPPQLRKLQQLTLVTLAQKHESIPYAVLFRELDIDGDVRELEDLIIESIYMGVLTGRLDQRGGLFRIKGAIGRDVRLEDIDGMMDKLQKWVANAETLLTSLEQ 189          
BLAST of jgi.p|Trimin1|71461 vs. uniprot
Match: A0A7R9UCJ6_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UCJ6_9STRA)

HSP 1 Score: 177 bits (448), Expect = 5.900e-52
Identity = 92/182 (50.55%), Postives = 123/182 (67.58%), Query Frame = 0
Query:    6 GAAGLEQYCLLAKTAKGRACVALIQKVMADKKIFVFGELLAMPNVQGLRGTEHEPYLRLLELFAYGVYGDHKAAGGALPQLSDAMTEKLRMLTVVALANTSRVVPYGKLQEALGVSSVRVVEDVVLDAMYAGLLQCRLDQRAGTLRVQHVTPRDVRPEEIDSMIATLDMWAGATDRALRGLR 187
            G+  LEQ+  LAKTAKG ACVALIQ+V+   K+FVFGELL MPNVQ LRGTEH+PYLRLLELFAYG   D + A  ALP +S+A   KLR L++++ A T   + Y +L  AL V +VR +EDVV+DA+YA L+  +L+QR   +R+     RDVR +++ ++   L  W   T   L+ L+
Sbjct:   19 GSDALEQFVSLAKTAKGAACVALIQQVLNHPKVFVFGELLLMPNVQALRGTEHQPYLRLLELFAYGTMADAQGAKEALPTMSEAQEAKLRKLSILSAAQTQGTLDYDQLMPALQVDNVRDLEDVVIDAIYADLIDAKLNQRERVVRIHRCVARDVRSDDLSAIKEKLKAWNRNTSEVLQALK 200          
BLAST of jgi.p|Trimin1|71461 vs. uniprot
Match: A0A7S1XVC1_9STRA (Hypothetical protein n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XVC1_9STRA)

HSP 1 Score: 177 bits (449), Expect = 2.240e-51
Identity = 94/186 (50.54%), Postives = 128/186 (68.82%), Query Frame = 0
Query:    2 AEDGGAAGLEQYCLLAKTAKGRACVALIQKVMADKKIFVFGELLAMPNVQGLRGTEHEPYLRLLELFAYGVYGDHKAAGGALPQLSDAMTEKLRMLTVVALANTSRVVPYGKLQEALGVSSVRVVEDVVLDAMYAGLLQCRLDQRAGTLRVQHVTPRDVRPEEIDSMIATLDMWAGATDRALRGLR 187
            A  GGA  LEQ+  LAKTAKGRACVALIQ+V+   K+FVFGELLAMPN+Q LR +EHEP+L+LLELFAYG  GD +     LP++++A   KLR LT++    +  V+ Y +L  + GV++VR +ED++++A+YAGLL  +L+QR   LRV    PRD+R  +I ++   L  W   T R L GL+
Sbjct:   84 ASAGGADALEQFVSLAKTAKGRACVALIQQVLNHPKVFVFGELLAMPNIQALRESEHEPHLQLLELFAYGNCGDSQ---DGLPEMTEAQVRKLRTLTLLTHCQSEGVLGYDQLMASTGVANVRELEDLIIEAIYAGLLDGKLNQRERVLRVSRCAPRDIRDSDIAAVALKLQRWHRNTQRVLTGLQ 266          
BLAST of jgi.p|Trimin1|71461 vs. uniprot
Match: A0A8K1FI89_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FI89_PYTOL)

HSP 1 Score: 174 bits (442), Expect = 4.860e-51
Identity = 85/173 (49.13%), Postives = 126/173 (72.83%), Query Frame = 0
Query:    3 EDGGAAGLEQYCLLAKTAKGRACVALIQKVMADKKIFVFGELLAMPNVQGLRGTEHEPYLRLLELFAYGVYGDHKAAGGALPQLSDAMTEKLRMLTVVALANTSRVVPYGKLQEALGVSSVRVVEDVVLDAMYAGLLQCRLDQRAGTLRVQHVTPRDVRPEEIDSMIATLDMW 175
            +D GA+ LEQ+ LLAK A+GRACVALIQ+ +++KK+FVF ELL MPNVQ L+GTEH+ Y +LLE+F +G Y D+ A    LP L+ A  +KLR LT ++LA  S++VPY  L + L V+++R +ED+++D +Y+GL+Q +LDQ++ +L V++   RD +  ++D MI  L  W
Sbjct:    4 DDAGASSLEQFTLLAKNARGRACVALIQQALSNKKLFVFRELLDMPNVQALKGTEHDSYFQLLEIFCFGKYRDYLAEKDVLPALNPAHIQKLRKLTTLSLAQKSKIVPYETLMKELDVTTIRELEDILIDTIYSGLVQGKLDQKSKSLIVKYAVGRDTQNADVDLMIEKLTNW 176          
BLAST of jgi.p|Trimin1|71461 vs. uniprot
Match: V9EG37_PHYPR (PCI domain-containing protein n=12 Tax=Phytophthora TaxID=4783 RepID=V9EG37_PHYPR)

HSP 1 Score: 171 bits (433), Expect = 1.070e-49
Identity = 87/170 (51.18%), Postives = 121/170 (71.18%), Query Frame = 0
Query:    6 GAAGLEQYCLLAKTAKGRACVALIQKVMADKKIFVFGELLAMPNVQGLRGTEHEPYLRLLELFAYGVYGDHKAAGGALPQLSDAMTEKLRMLTVVALANTSRVVPYGKLQEALGVSSVRVVEDVVLDAMYAGLLQCRLDQRAGTLRVQHVTPRDVRPEEIDSMIATLDMW 175
            GAAGLEQ+ LLAK A+GRACVALIQ+V+++KK+FVF ELL MPNV+ L+ +EH  +  LL +F++G Y D+ A    LP L+     KLR LTVV+LA+  + +PY  L + LGVS+VR VED+++D +Y+GL+Q +LDQ++    V++   RD R E+ID MI  L  W
Sbjct:    7 GAAGLEQFTLLAKNARGRACVALIQQVLSNKKLFVFRELLDMPNVEALKDSEHMEHYELLRIFSFGTYNDYLARKDELPDLTPQQMNKLRKLTVVSLAHRFKNIPYDTLIQDLGVSTVREVEDILIDTIYSGLVQGKLDQKSRCFVVKYAVGRDTRHEDIDDMIQKLSNW 176          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|71461 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YQX8_9STRA1.470e-139100.00PCI domain-containing protein n=1 Tax=Tribonema mi... [more]
F0YEG3_AURAN5.690e-5750.26PCI domain-containing protein n=1 Tax=Aureococcus ... [more]
A0A7S2RP08_9STRA1.490e-5649.47Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2CC19_9STRA7.290e-5651.63Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2UVG8_9STRA6.860e-5450.00Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A4D9D7R0_9STRA2.740e-5349.21PCI domain-containing protein n=2 Tax=Monodopsidac... [more]
A0A7R9UCJ6_9STRA5.900e-5250.55Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S1XVC1_9STRA2.240e-5150.54Hypothetical protein n=3 Tax=Phaeomonas parva TaxI... [more]
A0A8K1FI89_PYTOL4.860e-5149.13Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
V9EG37_PHYPR1.070e-4951.18PCI domain-containing protein n=12 Tax=Phytophthor... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00753PINTcoord: 85..175
e-value: 6.8E-16
score: 68.8
NoneNo IPR availablePANTHERPTHR15350:SF5COP9 SIGNALOSOME COMPLEX SUBUNIT 7coord: 10..203
IPR000717Proteasome component (PCI) domainSMARTSM00088PINT_4coord: 85..175
e-value: 6.8E-16
score: 68.8
IPR000717Proteasome component (PCI) domainPFAMPF01399PCIcoord: 84..153
e-value: 8.4E-6
score: 26.3
IPR000717Proteasome component (PCI) domainPROSITEPS50250PCIcoord: 1..157
score: 18.947889
IPR045237Eukaryotic translation initiation factor 3 subunit M eIF3m/COP9 signalosome complex subunit 7 COPS7PANTHERPTHR15350COP9 SIGNALOSOME COMPLEX SUBUNIT 7/DENDRITIC CELL PROTEIN GA17coord: 10..203

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_49contigContig_49:216367..220602 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|71461mRNA_10442Tribonema minus UTEX_B_3156 mRNAContig_49 216367..220613 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|71461|CE71460_43 ID=Trimin1|71461|CE71460_43|Name=jgi.p|Trimin1|71461|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=205bp
MAEDGGAAGLEQYCLLAKTAKGRACVALIQKVMADKKIFVFGELLAMPNV
QGLRGTEHEPYLRLLELFAYGVYGDHKAAGGALPQLSDAMTEKLRMLTVV
ALANTSRVVPYGKLQEALGVSSVRVVEDVVLDAMYAGLLQCRLDQRAGTL
RVQHVTPRDVRPEEIDSMIATLDMWAGATDRALRGLRKGVNSAKAAWKAE
EVQQR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000717PCI_dom
IPR045237COPS7/eIF3m